View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_69 (Length: 394)
Name: NF10954A_low_69
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_69 |
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Alignment Details
Target: chr7 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 2 - 385
Target Start/End: Original strand, 10963121 - 10963504
Alignment:
| Q |
2 |
cagtaataaacattaattgcataacattcctacctactatcaggatgacctgaagcatatttgattctttgcaatatcaaacggcactggtgcttgctta |
101 |
Q |
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| T |
10963121 |
cagtagtaaacattaattgcataacattcctacctactatcaggatgacctgaagcatatttgattctttgcaatatcaaacggcactggtgcttgctta |
10963220 |
T |
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| Q |
102 |
cagaatcagccaaagcattggtcctaaactcttcaagctctttagtaagtaactgtccagctctagggtgccgtgatcccaatctttgggcagatataag |
201 |
Q |
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| T |
10963221 |
cagaatcagccaaagcattggtcctaaactcttcaagctctttagtaagtaactgtccagctctagggtggcgtgatcccaatctttgagcagatataag |
10963320 |
T |
|
| Q |
202 |
aactgcctgtacatcttgaaccctatttgttgtatctgcggttgagtcaatattgaaaagaaccttacgaatatttgaaataatgacattaagaggatca |
301 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10963321 |
aactgcctgtacatcttgaactctatttgttgtatctgcggttgagtcaatattgaaaagaaccttacgaatatttgaaataatgacattaagaggatca |
10963420 |
T |
|
| Q |
302 |
tctgggtcgtctgctaggagtggatccaatccttctatatctatgtgctccgcaatagcccatataagtcgggccaatattctt |
385 |
Q |
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| T |
10963421 |
tctgggtcgtctgctaggagtggatccaatccttctatatctatgtgctccgcaatagcccatataagtcgggccaatattctt |
10963504 |
T |
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