View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10954A_low_694 (Length: 212)
Name: NF10954A_low_694
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10954A_low_694 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 24 - 197
Target Start/End: Complemental strand, 6111322 - 6111149
Alignment:
| Q |
24 |
gagtttggtgttccattttccttccttgtaggtagcagcagtatttcgcaagtctctaaggcttactcacgaagcgcgaaaacaatttgcatctggaaaa |
123 |
Q |
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| T |
6111322 |
gagtttggtgttccattttccttccttgtaggtagcagcagtatttcgcaagtctctaaggcttactcacgaagcgcgaaaacaatttgcatctggaaaa |
6111223 |
T |
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| Q |
124 |
ataaccaacttgatgactactgatgctgagtcacttcaggtatggttttcctttcctccctatcatctgatgtc |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6111222 |
ataaccaacttgatgactactgatgctgagtcacttcaggtatggttttcctttcctccctatcatctgatgtc |
6111149 |
T |
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