View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10954A_low_71 (Length: 388)

Name: NF10954A_low_71
Description: NF10954A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10954A_low_71
NF10954A_low_71
[»] scaffold0510 (2 HSPs)
scaffold0510 (52-376)||(1752-2086)
scaffold0510 (52-327)||(8050-8325)
[»] chr3 (19 HSPs)
chr3 (52-331)||(32747152-32747431)
chr3 (52-331)||(6037063-6037343)
chr3 (52-331)||(24179856-24180135)
chr3 (128-365)||(25893965-25894214)
chr3 (128-331)||(9569755-9569960)
chr3 (135-331)||(9576265-9576462)
chr3 (52-331)||(27501115-27501394)
chr3 (179-331)||(4310754-4310906)
chr3 (128-331)||(23069272-23069477)
chr3 (86-322)||(10940507-10940744)
chr3 (83-324)||(43995853-43996096)
chr3 (97-324)||(47441615-47441843)
chr3 (158-320)||(43932358-43932521)
chr3 (180-299)||(20650357-20650477)
chr3 (179-291)||(2786532-2786645)
chr3 (334-376)||(23069194-23069236)
chr3 (332-376)||(4310929-4310974)
chr3 (128-169)||(9576228-9576270)
chr3 (219-267)||(460794-460842)
[»] chr1 (26 HSPs)
chr1 (52-331)||(1175377-1175655)
chr1 (66-372)||(23761525-23761828)
chr1 (52-362)||(26622213-26622523)
chr1 (52-327)||(41304689-41304964)
chr1 (136-331)||(45023318-45023513)
chr1 (128-331)||(28996790-28996994)
chr1 (128-331)||(29002506-29002710)
chr1 (52-331)||(45016576-45016855)
chr1 (52-331)||(42092691-42092970)
chr1 (128-331)||(6239439-6239643)
chr1 (128-331)||(43687414-43687619)
chr1 (128-331)||(39052541-39052745)
chr1 (128-331)||(39058913-39059117)
chr1 (55-322)||(9869888-9870156)
chr1 (128-327)||(35085788-35085989)
chr1 (52-327)||(44242143-44242419)
chr1 (136-376)||(4600259-4600507)
chr1 (158-322)||(1115258-1115423)
chr1 (158-321)||(32798516-32798679)
chr1 (83-321)||(31073133-31073368)
chr1 (178-293)||(44917212-44917327)
chr1 (52-99)||(35086015-35086062)
chr1 (52-102)||(4600541-4600591)
chr1 (52-102)||(6239668-6239718)
chr1 (147-259)||(9316777-9316889)
chr1 (53-81)||(31073419-31073447)
[»] chr5 (26 HSPs)
chr5 (52-331)||(42151602-42151881)
chr5 (57-331)||(25893812-25894086)
chr5 (52-331)||(40957775-40958054)
chr5 (52-376)||(5876944-5877280)
chr5 (52-331)||(29413827-29414106)
chr5 (55-331)||(22360746-22361022)
chr5 (55-331)||(22314612-22314888)
chr5 (128-331)||(2958655-2958859)
chr5 (128-331)||(2967124-2967328)
chr5 (128-331)||(29974754-29974958)
chr5 (128-331)||(29981257-29981461)
chr5 (128-331)||(30021684-30021888)
chr5 (128-327)||(4974353-4974554)
chr5 (138-331)||(34356499-34356692)
chr5 (138-331)||(34358290-34358483)
chr5 (158-324)||(12505043-12505209)
chr5 (158-320)||(2439580-2439743)
chr5 (160-267)||(30579487-30579594)
chr5 (52-102)||(25893744-25893794)
chr5 (343-376)||(4974289-4974322)
chr5 (158-272)||(2823099-2823214)
chr5 (52-102)||(2958884-2958934)
chr5 (52-102)||(2967353-2967403)
chr5 (52-102)||(29974983-29975033)
chr5 (52-102)||(29981486-29981536)
chr5 (52-102)||(30021609-30021659)
[»] chr2 (23 HSPs)
chr2 (52-331)||(16816497-16816775)
chr2 (52-331)||(16855654-16855932)
chr2 (52-331)||(21067086-21067366)
chr2 (128-331)||(15853333-15853537)
chr2 (128-331)||(36781417-36781621)
chr2 (52-331)||(43268643-43268922)
chr2 (128-331)||(42930615-42930818)
chr2 (52-376)||(2020606-2020942)
chr2 (128-376)||(21341174-21341422)
chr2 (187-331)||(29485678-29485822)
chr2 (52-331)||(2158406-2158685)
chr2 (52-331)||(2164822-2165101)
chr2 (52-331)||(12951593-12951872)
chr2 (52-331)||(34840404-34840683)
chr2 (52-331)||(45012778-45013057)
chr2 (136-331)||(34834044-34834239)
chr2 (52-331)||(13901121-13901395)
chr2 (56-102)||(29485868-29485914)
chr2 (52-102)||(34833960-34834010)
chr2 (179-270)||(11909264-11909356)
chr2 (345-376)||(21067381-21067412)
chr2 (136-176)||(11909160-11909200)
chr2 (219-267)||(34744644-34744692)
[»] scaffold0053 (2 HSPs)
scaffold0053 (52-324)||(71228-71500)
scaffold0053 (52-331)||(50485-50764)
[»] chr7 (38 HSPs)
chr7 (52-331)||(21643301-21643579)
chr7 (66-331)||(19090578-19090843)
chr7 (52-331)||(36876338-36876617)
chr7 (52-331)||(14299688-14299967)
chr7 (52-331)||(14288503-14288782)
chr7 (57-331)||(8192117-8192390)
chr7 (128-331)||(9642150-9642354)
chr7 (57-331)||(8184557-8184830)
chr7 (136-331)||(23613171-23613366)
chr7 (180-331)||(6020140-6020291)
chr7 (52-328)||(3923255-3923531)
chr7 (128-376)||(15949884-15950135)
chr7 (52-331)||(1379742-1380021)
chr7 (52-331)||(5049060-5049339)
chr7 (52-331)||(6796233-6796512)
chr7 (179-376)||(15915363-15915562)
chr7 (52-331)||(2447443-2447722)
chr7 (52-331)||(8141608-8141887)
chr7 (55-331)||(26602768-26603045)
chr7 (52-331)||(48346247-48346521)
chr7 (52-331)||(48352631-48352905)
chr7 (158-319)||(37026511-37026673)
chr7 (174-319)||(22853497-22853642)
chr7 (158-319)||(39433693-39433854)
chr7 (228-362)||(1947980-1948115)
chr7 (158-321)||(33849905-33850069)
chr7 (52-102)||(8184489-8184539)
chr7 (52-102)||(8192049-8192099)
chr7 (53-102)||(37027168-37027217)
chr7 (55-102)||(15953492-15953539)
chr7 (52-102)||(1386075-1386125)
chr7 (52-102)||(6020030-6020080)
chr7 (53-102)||(22853274-22853321)
chr7 (53-95)||(39434057-39434099)
chr7 (55-108)||(15925160-15925213)
chr7 (347-376)||(22853671-22853700)
chr7 (338-374)||(33850096-33850132)
chr7 (277-321)||(45434369-45434413)
[»] scaffold0513 (1 HSPs)
scaffold0513 (52-331)||(11304-11583)
[»] chr6 (25 HSPs)
chr6 (52-331)||(4737539-4737818)
chr6 (136-328)||(34710801-34710993)
chr6 (52-331)||(32327641-32327920)
chr6 (128-331)||(4187480-4187684)
chr6 (52-327)||(7061663-7061938)
chr6 (52-327)||(7068849-7069124)
chr6 (52-302)||(4668556-4668806)
chr6 (180-331)||(31548690-31548841)
chr6 (52-331)||(1427571-1427850)
chr6 (52-331)||(4019383-4019662)
chr6 (52-331)||(4025809-4026088)
chr6 (52-331)||(4717688-4717967)
chr6 (128-331)||(9863995-9864200)
chr6 (52-331)||(34649595-34649874)
chr6 (52-331)||(34656046-34656325)
chr6 (180-331)||(31128575-31128726)
chr6 (128-327)||(13671048-13671249)
chr6 (52-327)||(21261731-21262007)
chr6 (174-319)||(27670837-27670982)
chr6 (97-294)||(1166694-1166891)
chr6 (52-102)||(4668493-4668543)
chr6 (52-102)||(4737476-4737526)
chr6 (52-102)||(31548890-31548940)
chr6 (53-102)||(27671123-27671172)
chr6 (179-267)||(14121808-14121896)
[»] chr4 (17 HSPs)
chr4 (52-331)||(37367470-37367749)
chr4 (128-331)||(55462007-55462211)
chr4 (128-331)||(13594891-13595095)
chr4 (136-331)||(8104664-8104859)
chr4 (57-331)||(27591094-27591368)
chr4 (52-331)||(30239009-30239288)
chr4 (57-331)||(17457639-17457912)
chr4 (55-331)||(7781107-7781384)
chr4 (52-331)||(41373781-41374060)
chr4 (128-331)||(37355569-37355774)
chr4 (179-327)||(16406132-16406281)
chr4 (122-299)||(5659761-5659939)
chr4 (188-293)||(30210841-30210947)
chr4 (219-320)||(36754132-36754233)
chr4 (52-102)||(27591386-27591436)
chr4 (52-102)||(17457930-17457980)
chr4 (149-267)||(40975903-40976021)
[»] chr8 (17 HSPs)
chr8 (57-331)||(36424894-36425168)
chr8 (52-331)||(36020896-36021175)
chr8 (52-331)||(6463724-6464003)
chr8 (128-331)||(7312142-7312346)
chr8 (187-331)||(11357467-11357611)
chr8 (52-331)||(8012468-8012747)
chr8 (52-331)||(36004632-36004911)
chr8 (128-376)||(16709904-16710163)
chr8 (52-331)||(36076760-36077039)
chr8 (53-376)||(1238942-1239273)
chr8 (158-299)||(12769713-12769855)
chr8 (162-293)||(15013211-15013343)
chr8 (160-321)||(45067692-45067854)
chr8 (52-102)||(12769882-12769932)
chr8 (52-102)||(36424826-36424876)
chr8 (162-236)||(15013432-15013507)
chr8 (55-102)||(7312371-7312418)
[»] scaffold0475 (2 HSPs)
scaffold0475 (52-302)||(8605-8855)
scaffold0475 (52-102)||(8868-8918)
[»] scaffold0043 (1 HSPs)
scaffold0043 (52-331)||(4153-4432)
[»] scaffold0060 (1 HSPs)
scaffold0060 (158-293)||(15980-16116)
[»] scaffold0343 (3 HSPs)
scaffold0343 (174-277)||(3501-3604)
scaffold0343 (274-318)||(3442-3486)
scaffold0343 (53-95)||(3836-3878)
[»] scaffold1487 (1 HSPs)
scaffold1487 (135-267)||(1346-1478)
[»] scaffold0536 (1 HSPs)
scaffold0536 (52-89)||(11514-11551)


Alignment Details
Target: scaffold0510 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 52 - 376
Target Start/End: Complemental strand, 2086 - 1752
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2086 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagttttacattcgccctcaactcgcatggcgagtggaaggc 1987  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  1986 gagcttactcgccatggcgaatgaatttactcgcgaggcgagttaaggcggtttagtctctaacagctgacgtggcacaaacccaatggcgaaggaacct 1887  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacc-----------atacttagttt 340  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||           |||||||||||    
T  1886 caactcgccatggcgaatgaatgagctcgcgaggcgagtttatgcagagtcagaattctataaatagcccactcaaccatttcattgatatacttagttt 1787  T
Q  341 tatcttagtttttcatagtttttcacttgtaatatt 376  Q
    | ||| ||||||| ||||||||||||||||||||||    
T  1786 t-tctgagtttttgatagtttttcacttgtaatatt 1752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 8050 - 8325
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8050 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 8149  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| ||||||||||||  |||| || ||||||||||| |||||||||||||||| |   |||||| ||| |||||||||||||||||| ||||||||||    
T  8150 gagcatactcgccatggagaatggatgtactcgcgaggggagttagggcggtttaactcttcacagatgatgtggcacaaacccaatggtgaaggaacct 8249  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 327  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| | || |||||||||||||||||||||| ||||    
T  8250 caactcgccatggcgaatgaaggagctcgcgaggcgatttgatgctgaatcagaattctataaatagcccagtcaa 8325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 32747431 - 32747152
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  32747431 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttatcattcgccctcaactcgcatggcgagtggaaggc 32747332  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32747331 gagcttactctccatggcgaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 32747232  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  32747231 caactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactcaaccat 32747152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 6037343 - 6037063
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| | |  ||||||  ||||  ||||||||| |||||||||||||    
T  6037343 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagaatgcaacaaaatttaca--cgccaccaactcgcaatggcgagtggaag 6037246  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaa 248  Q
    |||||||||||||||||||  | || | | |||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  6037245 gcgagcttactcgccatggtgagtggaatgactcgcgaggcgagctagggcggtttagccccctcacagctgacgtggcacaaacccaatggcgaaggaa 6037146  T
Q  249 cctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6037145 cctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaaccat 6037063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 24180135 - 24179856
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  24180135 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 24180037  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||||  |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24180036 cgagcaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 24179937  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  24179936 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 24179856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 128 - 365
Target Start/End: Complemental strand, 25894214 - 25893965
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25894214 caactcgcaatggcgagtggaaggcgagcccactcgccatggcgaatgcttttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 25894115  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  25894114 cacaaacccaatgaagaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 25894015  T
Q  327 acc-----------atacttagttttatcttagtttttcatagtttttca 365  Q
    |||           |||||||||||| |||||||||||||||||||||||    
T  25894014 accatttcattgtgatacttagttttctcttagtttttcatagtttttca 25893965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 9569755 - 9569960
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcaca-gctgacgtg 225  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| | || ||| ||||||||||||||| | ||||||||||||||||| | |||||||||    
T  9569755 caactcgcaatggcgagtggaaggcgagcttactcaccatggcgagtggattgactcgcgaggcgagtgaaggcggtttagcctctcaaatgctgacgtg 9569854  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    ||||||||||||||| |||| ||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  9569855 gcacaaacccaatggggaagaaacttcaactcgccatggcgaaggaaggagctcgcgaggcgagttagtacagaatcagaattctataaatagcccactc 9569954  T
Q  326 aaccat 331  Q
    ||||||    
T  9569955 aaccat 9569960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 135 - 331
Target Start/End: Original strand, 9576265 - 9576462
Alignment:
Q  135 catggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcaca-gctgacgtggcacaaac 233  Q
    ||||||||||||||||||||||||||||||||||| | || | | ||||||||||||||| | ||||||||||||||||| | |||||||||||||||||    
T  9576265 catggcgagtggaaggcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcctctcaaatgctgacgtggcacaaac 9576364  T
Q  234 ccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||| |||| ||| ||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  9576365 ccaatggggaagaaacttcaactcgccatggcaaaggaaggagctcgcgaggcgagttagtacagaatcagaattctataaatagcccactcaaccat 9576462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 27501115 - 27501394
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  27501115 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 27501212  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  27501213 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 27501312  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     |||||||||||||||||||||   ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  27501313 ttcaactcgccatggcgaatgatgcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 27501394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 179 - 331
Target Start/End: Original strand, 4310754 - 4310906
Alignment:
Q  179 tactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagc 277  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||  |||    
T  4310754 tactcgcgaggcgagttagggcggtttaagcttctcactgctgacgtggcacaaacccaatggggaagaaacttcaactcgcca-ggcgaatgaagtagc 4310852  T
Q  278 tcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||| |||||||||  || |||| |||||||||||||||||||||||||||||||    
T  4310853 tcgtgaggcgagtgcatgcagactcagaattctataaatagcccactcaaccat 4310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 23069477 - 23069272
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 225  Q
    ||||||||| |||||||| ||||||||| ||  | |||||||| |  |||  |||||||||||||||||||||||||||| || |||||  |||||| ||    
T  23069477 caactcgcaatggcgagtagaaggcgagtttggttgccatggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcattgctgacatg 23069378  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    |  |||||||||||| |||| ||| ||||||||||||||||||||||  ||||||| ||||||||  || |||| |||||||||||||||||||||||||    
T  23069377 gttcaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcaaggcgagtgaatgcagactcagaattctataaatagcccactc 23069278  T
Q  326 aaccat 331  Q
    ||||||    
T  23069277 aaccat 23069272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 322
Target Start/End: Original strand, 10940507 - 10940744
Alignment:
Q  86 aaggtgagcaattccagggagcactagttttacattcgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcg 184  Q
    |||| |||||||||||| |||||  |||||| ||  |||||||||||| ||  |||||||| |||||||||  |||||| ||||| | |||||||| |||    
T  10940507 aaggcgagcaattccagagagcatcagtttttcacacgccctcaactcacaacggcgagtgaaaggcgagca-actcgcaatggcgagtgaatttaatcg 10940605  T
Q  185 cgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaat-gaatgagctcgcg 282  Q
     |||||||||||||||||  ||  || |||| ||  |||||||| |||||  ||||| |||| ||| ||||||||||||||||||| || | | ||||||    
T  10940606 tgaggcgagttagggcggcctaaactcctcaaaggcgacgtggctcaaacttaatggtgaagaaacatcaactcgccatggcgaatagagtta-ctcgcg 10940704  T
Q  283 aggcgagttgatacagagtcagaattctataaatagccca 322  Q
    |||||||||||| ||||   ||||||||||||||||||||    
T  10940705 aggcgagttgatgcagatcaagaattctataaatagccca 10940744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 324
Target Start/End: Complemental strand, 43996096 - 43995853
Alignment:
Q  83 tcaaaggtgagcaa-ttccagggagcactagttttacattcgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaattta 180  Q
    ||||||| |||||| |||||| |||||  |||||| ||  |||||||||||||||  ||||| | ||||||||||  ||||||  |||  | || |||||    
T  43996096 tcaaaggcgagcaagttccagagagcatcagtttttcacacgccctcaactcgcaaaggcgaattgaaggcgagca-actcgcactggtgagtgcattta 43995998  T
Q  181 ctcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 279  Q
    ||||||||||||||||||||||| ||  ||| ||| || ||||||||| |||||||| ||| |||| |||||||||||||||| |||| ||||    |||    
T  43995997 ctcgcgaggcgagttagggcggtctaaactcctcaaaggtgacgtggctcaaacccactggtgaagtaacctcaactcgccattgcgagtgaagttactc 43995898  T
Q  280 gcgaggcgagttgatacagagtcagaattctataaatagcccact 324  Q
    |||||||||||| || ||||    |||| ||||||||||||||||    
T  43995897 gcgaggcgagttaatgcagaacatgaatcctataaatagcccact 43995853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 324
Target Start/End: Complemental strand, 47441843 - 47441615
Alignment:
Q  97 ttccagggagcactagttttacattcgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagtt 195  Q
    |||||| |||||  |||||| ||  |||||||||||| ||  ||||| ||||||||||||  |||||| ||||| | || |||||||| | |||||||||    
T  47441843 ttccagagagcatcagtttttcacacgccctcaactcccaaaggcgaatggaaggcgagca-actcgcaatggcgagtgcatttactcacaaggcgagtt 47441745  T
Q  196 agggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgat 294  Q
    ||||||   ||   || ||| || ||||||||| |||||||| ||| |||| |||||||||||||||| |||||||||    ||||||||||||||||||    
T  47441744 agggcgacctaaattcctcaaagatgacgtggctcaaacccagtggtgaagtaacctcaactcgccattgcgaatgaagttactcgcgaggcgagttgat 47441645  T
Q  295 acagagtcagaattctataaatagcccact 324  Q
     ||||    |||||||||||||||||||||    
T  47441644 gcagaacatgaattctataaatagcccact 47441615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 43932521 - 43932358
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||| ||||| | |||| ||||||| |||||||||||||||||  ||  ||| | | || ||||||||| |||||  ||||| |||| ||| ||||||    
T  43932521 actcgcaatggcgagtgaaattactcgtgaggcgagttagggcggcctaaactccttagaggtgacgtggctcaaacttaatggtgaagaaacatcaact 43932422  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcc 320  Q
    |||||||||||||| |    |||||||||||||||||| ||||   ||||||||||||||||||    
T  43932421 cgccatggcgaatggagttactcgcgaggcgagttgatgcagatcaagaattctataaatagcc 43932358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 20650357 - 20650477
Alignment:
Q  180 actcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagct 278  Q
    ||||||||||||||||||||||| | |  ||| ||| || ||||||| |||||||||| | | |||| |||||||||||| |||||||||||||    ||    
T  20650357 actcgcgaggcgagttagggcggctaaatctcctcagaggtgacgtgtcacaaacccactagtgaagtaacctcaactcggcatggcgaatgaagctact 20650456  T
Q  279 cgcgaggcgagttgatacaga 299  Q
    |||||||||||||||| ||||    
T  20650457 cgcgaggcgagttgatgcaga 20650477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 2786645 - 2786532
Alignment:
Q  179 tactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagc 277  Q
    |||| ||||||||||||||||||| | |  ||| ||| ||||||||||||| ||||||| ||| |||| ||| |||||||||||||||||||| ||   |    
T  2786645 tacttgcgaggcgagttagggcggctaaaactcctcaaagctgacgtggcagaaacccactggtgaagaaacatcaactcgccatggcgaatgcatttac 2786546  T
Q  278 tcgcgaggcgagtt 291  Q
    | ||||||||||||    
T  2786545 ttgcgaggcgagtt 2786532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 23069236 - 23069194
Alignment:
Q  334 ttagttttatcttagtttttcatagtttttcacttgtaatatt 376  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  23069236 ttagttttctcttagtttttcatagtttttcacttgtaatatt 23069194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 4310929 - 4310974
Alignment:
Q  332 acttagtttt-atcttagtttttcatagtttttcacttgtaatatt 376  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  4310929 acttagttttgatcttagtttttcatagtttttcacttgtaatatt 4310974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 9576228 - 9576270
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggc 169  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  9576228 caactcgcaatggcgagtggaaggcgagcttactcgccatggc 9576270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 460794 - 460842
Alignment:
Q  219 tgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcga 267  Q
    |||||||||| |||||||||||||||| ||  |||||||||||||||||    
T  460794 tgacgtggcaaaaacccaatggcgaagcaaggtcaactcgccatggcga 460842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 1175655 - 1175377
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  1175655 atcactcgcctccaactcgcca-ggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 1175557  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| ||||||||||||| |||| || |||| |||||||||||||||||||| || |   |||||| |||||||||||||||||||||| ||||||||||    
T  1175556 gagcatactcgccatggcgaatggatgtacttgcgaggcgagttagggcggtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 1175457  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  1175456 caactcgccatggcgaatgaaggagctcgcgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat 1175377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 66 - 372
Target Start/End: Original strand, 23761525 - 23761828
Alignment:
Q  66 actcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggcgagcttactcgcca 165  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||||||| |||    
T  23761525 actcgccatggcgagcttcaaaggcgagcaattccagggagcaccagttttt-attcgccctcaactcgcatggcgagtggaaggtgagcttactcacca 23761623  T
Q  166 tggcaaatgaatttactcgcgaggcgagttagggcggt-ttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatgg 264  Q
    |||| |||| |||||||||||||||||||||||||||| |||  || ||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  23761624 tggcgaatggatttactcgcgaggcgagttagggcggtcttaagct-tcatagttgacgtggcacaaacccaatggtgaagtaacctcaactcgccatgg 23761722  T
Q  265 cgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccatacttagttttatcttagtttttcatagtttttc 364  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||| || |||||||||||| |||| |||||    
T  23761723 cgaatgaatgagctcgcgaggcgagtggatgcagagtcaaaattctataaatagcccactcaaacatacttag-ttaatcttagtttttgatag-ttttc 23761820  T
Q  365 acttgtaa 372  Q
    ||||||||    
T  23761821 acttgtaa 23761828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 52 - 362
Target Start/End: Complemental strand, 26622523 - 26622213
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | | |||| ||||||||||||||||||||||||||||||||||    
T  26622523 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaatttcagggagccccaatttttcattcgccctcaactcgcatggcgagtggaaggc 26622424  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| ||||||||||||| |||| || ||||||||||| ||||||||||||| || |   |||||| |||||||||||||||||||||| ||||||||||    
T  26622423 gagcatactcgccatggcgaatggatgtactcgcgaggtgagttagggcggtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 26622324  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccatacttag-ttttatcttagtt 350  Q
    |||||| |||||||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||  | || |||||||||||||    
T  26622323 caactcaccatggcgaatgaaggagctcgcgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat-ttcagtttttatcttagtt 26622225  T
Q  351 tttcatagtttt 362  Q
    ||||||| ||||    
T  26622224 tttcatactttt 26622213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 41304689 - 41304964
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  41304689 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 41304788  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| ||||||||||||  |||| || ||||||||||| |||||||||||||||| |   |||||| ||| |||||||||||||||||| ||||||||||    
T  41304789 gagcatactcgccatggagaatggatgtactcgcgaggggagttagggcggtttaactcttcacagatgatgtggcacaaacccaatggtgaaggaacct 41304888  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 327  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| | || |||||||||||||||||||||| ||||    
T  41304889 caactcgccatggcgaatgaaggagctcgcgaggcgatttgatgctgaatcagaattctataaatagcccagtcaa 41304964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 136 - 331
Target Start/End: Complemental strand, 45023513 - 45023318
Alignment:
Q  136 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 235  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45023513 atggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 45023414  T
Q  236 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  45023413 aatggcgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactcaaccat 45023318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 28996994 - 28996790
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  |||||||||| | ||||  | |||||||||||||||| ||||||||||| |   |||||| ||||||||    
T  28996994 caactcgcaatggcgagtggaaggcgagccaactcgccatgacgaatgtgtctactcgcgaggcgagtgagggcggtttaactcttcacagatgacgtgg 28996895  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  28996894 cacaaacccaatggtgaaggaacttcaactcgccatggcgaatgaaggagctcgcgaggcgagttgatgcagaatcagaattctataaatagcccactca 28996795  T
Q  327 accat 331  Q
    |||||    
T  28996794 accat 28996790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 29002710 - 29002506
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  |||||||||| | ||||  | |||||||||||||||| ||||||||||| |   |||||| ||||||||    
T  29002710 caactcgcaatggcgagtggaaggcgagccaactcgccatgacgaatgtgtctactcgcgaggcgagtgagggcggtttaactcttcacagatgacgtgg 29002611  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  29002610 cacaaacccaatggtgaaggaactccaactcgccatggcgaatgaaggagctcgcgaggcgagttgatgcagaatcagaattctataaatagcccactca 29002511  T
Q  327 accat 331  Q
    |||||    
T  29002510 accat 29002506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 45016855 - 45016576
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  45016855 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 45016758  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  45016757 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 45016658  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  45016657 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 45016576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 42092970 - 42092691
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  42092970 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 42092873  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  42092872 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 42092773  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||| |||||||||||||||    
T  42092772 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaagagcccactcaaccat 42092691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 6239643 - 6239439
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  6239643 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 6239544  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  6239543 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 6239444  T
Q  327 accat 331  Q
    |||||    
T  6239443 accat 6239439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 43687619 - 43687414
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 225  Q
    ||||||||| |||||||| ||||||||| ||  |||||| ||| |  |||  |||||||||||||||||||||||||||| || |||||| |||||||||    
T  43687619 caactcgcaatggcgagtagaaggcgagtttgttcgccacggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcactgctgacgtg 43687520  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  ||  ||| |||||||||||||||||||||||||    
T  43687519 gcacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagtgaatgtagattcagaattctataaatagcccactc 43687420  T
Q  326 aaccat 331  Q
    ||||||    
T  43687419 aaccat 43687414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 39052541 - 39052745
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| |||||||||  |  |||||||||| | || | | ||||||||||||||| | |||||||||||||||||  ||||||||||    
T  39052541 caactcgcagtggcgagtagaaggcgagtgtgttcgccatggcgagtggaatgactcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtgg 39052640  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||    
T  39052641 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagttaaggcagactcagaatcctataaatagcccactca 39052740  T
Q  327 accat 331  Q
    |||||    
T  39052741 accat 39052745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 39058913 - 39059117
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| |||||||||  |  |||||||||| | || | | ||||||||||||||| | |||||||||||||||||  ||||||||||    
T  39058913 caactcgcagtggcgagtagaaggcgagtgtgttcgccatggcgagtggaatgactcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtgg 39059012  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||    
T  39059013 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagttaaggcagactcagaatcctataaatagcccactca 39059112  T
Q  327 accat 331  Q
    |||||    
T  39059113 accat 39059117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 55 - 322
Target Start/End: Complemental strand, 9870156 - 9869888
Alignment:
Q  55 actcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcga 153  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||||  ||||  ||   | ||  ||||  ||||||||| |||||||| ||||||||    
T  9870156 actcgcctccaactcgccatggcgagcagcaaaggcgagcaattccagtaagcaacagagat-cacacgccaccaactcgcaatggcgagtagaaggcga 9870058  T
Q  154 gcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctc 252  Q
        |||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||| | | || | |||||||||||| ||||||| |||| ||| ||    
T  9870057 ctgaactcgccatggcgaatgaatgtactcgcaaggcgagttagggcggtttagactccttagaggttacgtggcacaaaaccaatggtgaagaaacttc 9869958  T
Q  253 aactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagccca 322  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||   |||||| |||||||||||||    
T  9869957 aactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaacgagaattttataaatagccca 9869888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 128 - 327
Target Start/End: Complemental strand, 35085989 - 35085788
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 225  Q
    ||||||||| |||||||| |||||||||  |  |||||||||||| || |  ||||||||||||||||||||| |||||| || |||||| | |||||||    
T  35085989 caactcgcaatggcgagtagaaggcgagtatgttcgccatggcaagtgcaagtactcgcgaggcgagttagggtggtttaagcttctcactgatgacgtg 35085890  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    |||||||| |||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||| ||| |||| | ||||||||||||||||| |||||    
T  35085889 gcacaaactcaatggtgaaggaactccaactcgccatggcgaatgaaggagctcgcgaggcgagtggatgcagatttagaattctataaatagctcactc 35085790  T
Q  326 aa 327  Q
    ||    
T  35085789 aa 35085788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 52 - 327
Target Start/End: Complemental strand, 44242419 - 44242143
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||| |||||||||||||||||||||||||  |||||| ||||||||||||  |||| | |   || ||  ||||  ||||||||| ||||||||  |||    
T  44242419 atcattcgcctccaactcgccatggcgagcagcaaaggcgagcaattccagtaagcaacaaagattgca--cgccaccaactcgcaatggcgagtaaaag 44242322  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtggcacaaacccaatggcgaaggaa 248  Q
    |||||  |  |||||||||| | || |  |||||| ||||||||||||||||||||| || |||||| | |||||||||||||||||||||| |||||||    
T  44242321 gcgagtctgttcgccatggcgagtgcaagtactcgtgaggcgagttagggcggtttaagcttctcactgatgacgtggcacaaacccaatggtgaaggaa 44242222  T
Q  249 cctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 327  Q
    | ||||||||||||||||||||||  |||||||||||||||| ||| || | | ||||||||||||||||| |||||||    
T  44242221 cttcaactcgccatggcgaatgaagaagctcgcgaggcgagtggatgcatatttagaattctataaatagctcactcaa 44242143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 136 - 376
Target Start/End: Complemental strand, 4600507 - 4600259
Alignment:
Q  136 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtggcacaaacc 234  Q
    ||||||||| |||||||||  |  |||||||||| | || |  |||||||||||||||||||||||||||| || |||||| | |||| |||||||||||    
T  4600507 atggcgagtagaaggcgagtctgttcgccatggcgagtgcaagtactcgcgaggcgagttagggcggtttaagcttctcactgatgacatggcacaaacc 4600408  T
Q  235 caatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacca---- 330  Q
    |||||  |||||||| ||||||||||||||||||||||  |||||||||||||||| |||  ||| | | ||||||||||||||| ||||||| ||        
T  4600407 caatgatgaaggaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagtggatgtagatttataattctataaatagctcactcaatcagttc 4600308  T
Q  331 ---tacttag-ttttatcttagtttttcatagtttttcacttgtaatatt 376  Q
        | |||| ||||||||||||||||||||| |||||||||||||||||    
T  4600307 aatgagttagtttttatcttagtttttcatag-ttttcacttgtaatatt 4600259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 322
Target Start/End: Original strand, 1115258 - 1115423
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||||||||| | || || ||||||||||||||||||||||||  ||| ||| |||||| |||||||||||||||||| | | |||||||| | ||||    
T  1115258 actcgccatggcgagtgcatgtactcgcgaggcgagttagggcggcctagactcctcacagatgacgtggcacaaacccactagtgaaggaacttaaact 1115357  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaa-ttctataaatagccca 322  Q
    |||||||||||||||| ||||||||||||||||||||  |||| |||||| || |||||||||||||    
T  1115358 cgccatggcgaatgaaggagctcgcgaggcgagttgaagcaga-tcagaatttatataaatagccca 1115423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 321
Target Start/End: Complemental strand, 32798679 - 32798516
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||||||||| | || || ||||||||||||||||||||||||  ||  || ||||||| |||||||||||||||||||| | |||||||| || |||    
T  32798679 actcgccatggcgagtgcatgtactcgcgaggcgagttagggcggcctaaactcctcacagatgacgtggcacaaacccaatcgtgaaggaacttc-act 32798581  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaa-ttctataaatagccc 321  Q
     ||||| ||||||||| ||||||||||||||||||||  |||| |||||| |||||||||||||||    
T  32798580 tgccatagcgaatgaaggagctcgcgaggcgagttgaagcaga-tcagaagttctataaatagccc 32798516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 321
Target Start/End: Complemental strand, 31073368 - 31073133
Alignment:
Q  83 tcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttac 181  Q
    ||||||| |||||||| ||| |||||  |||||| || ||||||| |||||||| ||||||||| |||| ||||       | ||||| | |||||||||    
T  31073368 tcaaaggcgagcaattacagagagcatcagtttttcactcgcccttaactcgcaatggcgagtgaaaggtgagcaa-----caatggcgagtgaatttac 31073274  T
Q  182 tcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcg 280  Q
    |||||||||||||||||||||  ||  ||| |||  | ||||||||| |||||  ||||| |||| ||| |||||||||||||||||||| |    ||||    
T  31073273 tcgcgaggcgagttagggcggcctaaactcctcaagggtgacgtggctcaaacttaatggtgaagaaacatcaactcgccatggcgaatggagttactcg 31073174  T
Q  281 cgaggcgagttgatacagagtcagaattctataaatagccc 321  Q
     ||||||||||||| |||| | |||| ||||||||||||||    
T  31073173 tgaggcgagttgatgcagattaagaaatctataaatagccc 31073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 44917327 - 44917212
Alignment:
Q  178 ttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagc 277  Q
    |||| ||||||| |||||||||||| | | |  || | || ||| ||||||||| |||| ||| |||| |||||||||||||||||| |||||||    |    
T  44917327 ttacccgcgaggtgagttagggcggctaaactccttagaggtgatgtggcacaatcccactggtgaagtaacctcaactcgccatggagaatgaagttac 44917228  T
Q  278 tcgcgaggcgagttga 293  Q
    ||||||||||||||||    
T  44917227 tcgcgaggcgagttga 44917212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 35086062 - 35086015
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattc 99  Q
    |||| |||||||||||||||||||||||||  |||||| |||||||||    
T  35086062 atcattcgcctccaactcgccatggcgagcagcaaaggcgagcaattc 35086015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 4600591 - 4600541
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||| |||||||||||||||||||| ||||  |||||| ||||||||||||    
T  4600591 atcattcgcctccaactcgccatggtgagcagcaaaggcgagcaattccag 4600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 6239718 - 6239668
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  6239718 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccag 6239668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 9316889 - 9316777
Alignment:
Q  147 aaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaagg 246  Q
    |||||||||| ||| |||||||| |   || ||||||||||||||||||| |||||  ||  |  ||| ||||||||||||| ||||||| |||  |||     
T  9316889 aaggcgagctaacttgccatggcgagcaaaattactcgcgaggcgagttaaggcggcctaatccttcaaagctgacgtggcagaaacccactgggaaaga 9316790  T
Q  247 aacctcaactcgc 259  Q
    || ||||||||||    
T  9316789 aagctcaactcgc 9316777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 31073447 - 31073419
Alignment:
Q  53 tcactcgcctccaactcgccatggcgagc 81  Q
    |||||||||||||||||||||||||||||    
T  31073447 tcactcgcctccaactcgccatggcgagc 31073419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 42151881 - 42151602
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  42151881 atcactcgcctcaaactcgccatggtgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcaagtggaaggc 42151782  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| ||||||||||||  |||| || |||||||||||||||| ||||||||||| |   |||||| |||||||||||||||||||||| ||||||||||    
T  42151781 gagcatactcgccatggtgaatggatgtactcgcgaggcgagtgagggcggtttaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 42151682  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  42151681 caactcgccatggcgactgaaggagctcgcgaggcgagtggatacagaatcagaattctataaatagtccactcaaccat 42151602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 57 - 331
Target Start/End: Original strand, 25893812 - 25894086
Alignment:
Q  57 tcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 155  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  25893812 tcgcctccacctcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 25893910  T
Q  156 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 255  Q
      |||||||||||| | || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25893911 aaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 25894010  T
Q  256 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  25894011 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 25894086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 40957775 - 40958054
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||  |||| | |   |||||  ||||  |||||| || |||||||||||||    
T  40957775 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccagaaagcaacaaagattaca--cgccaccaactcacaatggcgagtggaag 40957872  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    ||||||  |||||||||||| | || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40957873 gcgagcaaactcgccatggcgagtggaatgactcgcgaggcgagctagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 40957972  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  40957973 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcaaaattctataaatagcccactcaaccat 40958054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 52 - 376
Target Start/End: Complemental strand, 5877280 - 5876944
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    |||||||||||||||||||||||||| |||  |||||| |||||||||||| |||||  |    | | ||||||  ||||||||| ||||||||||||||    
T  5877280 atcactcgcctccaactcgccatggctagcagcaaaggcgagcaattccagtgagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaagg 5877182  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||||  |||||||||||| ||||  | |||||||||||||||||||||||||||| |   |||||| |||| ||||||||||||||||| |||||||||    
T  5877181 cgagcgaactcgccatggcgaatgtgtctactcgcgaggcgagttagggcggtttaactcttcacagatgacatggcacaaacccaatggtgaaggaacc 5877082  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaat-agcccactcaacc-----------atacttagt 338  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||           |||||||||    
T  5877081 tcaactcgccatggcgaatgaaggagctcgcgaggcgagttgatgcagaatcagaattctataaataagcccactcaaccatttcatggatatacttagt 5876982  T
Q  339 tttatcttagtttttcatagtttttcacttgtaatatt 376  Q
    || |||||||||||||||||||||||||||||||||||    
T  5876981 ttaatcttagtttttcatagtttttcacttgtaatatt 5876944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 29413827 - 29414106
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| ||  ||||  |    | | ||||||  ||||||||| ||||||||||||||    
T  29413827 atcactcgcctccaactcgccatgacgagcttcaaaggcgagcaattcgagtaagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaagg 29413925  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||||  |||||||||||| || |  | |||||||||||||||| ||||||||||| |   |||||| |||||||||||||||||||||| |||||||||    
T  29413926 cgagcaaactcgccatggcgaacgtgtctactcgcgaggcgagtgagggcggtttaactcttcacagatgacgtggcacaaacccaatggtgaaggaacc 29414025  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  29414026 tcaactcgccatggcgaatgaaggagctcgcgaggcgagtggatgcagaatcagaattctataaatagcccactcaaccat 29414106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 55 - 331
Target Start/End: Complemental strand, 22361022 - 22360746
Alignment:
Q  55 actcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcga 153  Q
    |||||||||||||||||||||||||||   ||||| |||||||| ||| |||||  |    | | ||||||  ||||||||| |||||||||||||||||    
T  22361022 actcgcctccaactcgccatggcgagcagaaaaggcgagcaatttcagtgagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaaggcga 22360924  T
Q  154 gcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctca 253  Q
    |   |||||||||||| ||||  | |||||||||||||||||||||||||||| |   |||||  |||||||||||||||||||||| ||||||||||||    
T  22360923 gagaactcgccatggcgaatgtgtctactcgcgaggcgagttagggcggtttaactcttcacatatgacgtggcacaaacccaatggtgaaggaacctca 22360824  T
Q  254 actcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  22360823 actcgccatggcgaatgaaggagctcgcgaggcgagttgatacagaatcagaattctataaatagctcactcaaccat 22360746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 55 - 331
Target Start/End: Complemental strand, 22314888 - 22314612
Alignment:
Q  55 actcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcga 153  Q
    ||||||||||||||||||||||| |||   ||||| |||||||||||| |||||  |    | | ||||||  ||||||| | |||||||||||||||||    
T  22314888 actcgcctccaactcgccatggctagcagaaaaggcgagcaattccagtgagcatcaaagatcc-ttcgccaccaactcgtaatggcgagtggaaggcga 22314790  T
Q  154 gcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctca 253  Q
    |   |||||||||||||||||  | |||||||||||||||||||||||||||| |   |||||| |||| ||||||||||||||||| ||||||||||||    
T  22314789 gagaactcgccatggcaaatgtgtgtactcgcgaggcgagttagggcggtttaactcttcacagatgacttggcacaaacccaatggtgaaggaacctca 22314690  T
Q  254 actcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||    
T  22314689 actcgccatggcgaatgaaggagctcgcgaggtgagttgatacaaaatcagaattctataaatagcccactcaaccat 22314612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 2958859 - 2958655
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  2958859 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 2958760  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  2958759 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 2958660  T
Q  327 accat 331  Q
    |||||    
T  2958659 accat 2958655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 2967328 - 2967124
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  2967328 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 2967229  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  2967228 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 2967129  T
Q  327 accat 331  Q
    |||||    
T  2967128 accat 2967124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 29974958 - 29974754
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  29974958 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 29974859  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  29974858 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 29974759  T
Q  327 accat 331  Q
    |||||    
T  29974758 accat 29974754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 29981461 - 29981257
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  29981461 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 29981362  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  29981361 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 29981262  T
Q  327 accat 331  Q
    |||||    
T  29981261 accat 29981257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 30021684 - 30021888
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  30021684 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 30021783  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  30021784 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 30021883  T
Q  327 accat 331  Q
    |||||    
T  30021884 accat 30021888  T

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Target: chr5; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 128 - 327
Target Start/End: Complemental strand, 4974554 - 4974353
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 225  Q
    ||||||||| |||||||| ||||||||| ||  || ||||||| || |||  |||||||||||||||||||||||||||| || |||||| | |||||||    
T  4974554 caactcgcaatggcgagtagaaggcgagtttgttcaccatggcgaaggaaagtactcgcgaggcgagttagggcggtttaagcttctcactgatgacgtg 4974455  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    |||||||||||||||  ||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||| | |||||| ||||||||||||| ||    
T  4974454 gcacaaacccaatggtaaaggaacttcaacttgccatggcgaatgaaggagctcgcgaggcgagtggatacagatttagaattttataaatagcccattc 4974355  T
Q  326 aa 327  Q
    ||    
T  4974354 aa 4974353  T

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Target: chr5; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 138 - 331
Target Start/End: Original strand, 34356499 - 34356692
Alignment:
Q  138 ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaa 237  Q
    ||||||| |||||||||  |  |||||||||| | || | | ||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||    
T  34356499 ggcgagtagaaggcgagtgtgttcgccatggcgagtggaatgactcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtggcacaaacccaa 34356598  T
Q  238 tggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||||    
T  34356599 tggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagttaaggcagactcagaatcctataaatagcccactcaaccat 34356692  T

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Target: chr5; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 138 - 331
Target Start/End: Original strand, 34358290 - 34358483
Alignment:
Q  138 ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaa 237  Q
    ||||||| |||||||||  |  |||||||||| | || | | ||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||    
T  34358290 ggcgagtagaaggcgagtgtgttcgccatggcgagtggaatgactcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtggcacaaacccaa 34358389  T
Q  238 tggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||| |||| ||| ||||||||||||||||||||||  ||| ||||||||||||| |  |||| ||||||| |||||||||||||||||||||||    
T  34358390 tggggaagaaacttcaactcgccatggcgaatgaagtagcccgcgaggcgagttaaggcagactcagaatcctataaatagcccactcaaccat 34358483  T

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Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 324
Target Start/End: Original strand, 12505043 - 12505209
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||  ||  || |||| || ||| ||||| |||||||| ||| |||| |||||| |||    
T  12505043 actcgcaatggcgaatgcatttactcgcgaggcgagttagggcggcctaaactcctcaaaggtgatgtggctcaaacccactggtgaagtaacctc-act 12505141  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccact 324  Q
    |||||| |||||||||    ||||||||||||||||||  | | |  |||||||||||||||||||||    
T  12505142 cgccattgcgaatgaagttactcgcgaggcgagttgatgaataatgggaattctataaatagcccact 12505209  T

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Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 2439743 - 2439580
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||| ||||| | |||| ||||||||||||| ||||||||||   ||  ||| ||| || ||||||||| |||||  ||||| |||| ||| ||||||    
T  2439743 actcgcaatggcgagtgaaattactcgcgaggcaagttagggcgccctaaactcctcagaggtgacgtggctcaaacttaatggtgaagaaacatcaact 2439644  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtca-gaattctataaatagcc 320  Q
    | |||||||||||| |    |||||||||||||||||| || | ||| |||||||||||||||||    
T  2439643 caccatggcgaatggagttactcgcgaggcgagttgatgca-aatcaggaattctataaatagcc 2439580  T

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Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 30579487 - 30579594
Alignment:
Q  160 tcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcg 258  Q
    |||||||||| ||| ||| |||||||||||||||||| |||||   |  ||| ||| ||||||||||||| ||||||| ||| |||| ||| ||||||||    
T  30579487 tcgccatggcgaat-aatatactcgcgaggcgagttaaggcggccaaaactcctcagagctgacgtggcagaaacccactggtgaagaaacatcaactcg 30579585  T
Q  259 ccatggcga 267  Q
    |||||||||    
T  30579586 ccatggcga 30579594  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 25893744 - 25893794
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||    
T  25893744 atcactcgcctccaacttgccatggcaagcatcaaaggcgagcaattccag 25893794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 4974322 - 4974289
Alignment:
Q  343 tcttagtttttcatagtttttcacttgtaatatt 376  Q
    ||||||||||||||||||||||||||||||||||    
T  4974322 tcttagtttttcatagtttttcacttgtaatatt 4974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 2823214 - 2823099
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||| ||||| | || |||||||| | |||||||||||||||| | |  ||| ||| || ||||||| |||| | ||| ||| |||| || |||||||    
T  2823214 actcgcaatggcgagtggatttactcacaaggcgagttagggcggctaaaactcctcagaggtgacgtgtcacagatccactggtgaagaaatctcaact 2823115  T
Q  257 cgccatggcgaatgaa 272  Q
    ||||||||||||||||    
T  2823114 cgccatggcgaatgaa 2823099  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 2958934 - 2958884
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  2958934 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccag 2958884  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 2967403 - 2967353
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  2967403 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccag 2967353  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 29975033 - 29974983
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  29975033 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccag 29974983  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 29981536 - 29981486
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  29981536 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccag 29981486  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 30021609 - 30021659
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  30021609 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccag 30021659  T

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Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 16816497 - 16816775
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  16816497 atcactcgcctccaactcgcca-ggcgagcttcaaaggcgagcaattccagtgagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 16816595  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| ||||||||||||| |||| || |||| |||||||||||||||||||| || |   |||||| |||||||||||||||||||||| ||||||||||    
T  16816596 gagcatactcgccatggcgaatggatgtacttgcgaggcgagttagggcggtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 16816695  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||| |||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  16816696 caactcgccatggcgaatgaaggagctcacgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat 16816775  T

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Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 16855654 - 16855932
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  16855654 atcactcgcctccaactcgcca-ggcgagcttcaaaggcgagcaattccagtgagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 16855752  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| ||||||||||||| |||| || |||| |||||||||||||||||||| || |   |||||| |||||||||||||||||||||| ||||||||||    
T  16855753 gagcatactcgccatggcgaatggatgtacttgcgaggcgagttagggcggtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 16855852  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||| |||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  16855853 caactcgccatggcgaatgaaggagctcacgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat 16855932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 21067086 - 21067366
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||  || ||| ||||| |||||||||||||||||| ||| |||||    
T  21067086 atcactcgcctccaacttgccatggcgagcttcaaaggcgagcaattccagagagcatcagattttcattctccctcaactcgcatggcgggtgaaaggc 21067185  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctct-cacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    ||||  |||||||||||| |||| || | |||||||||||||||| |||||| ||  |||| |||||||||||||||||||||||||||| |||||||||    
T  21067186 gagcacactcgccatggcgaatggatgtgctcgcgaggcgagttatggcggtctaaactcttcacagctgacgtggcacaaacccaatggtgaaggaacc 21067285  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21067286 gcaactcgccatggcgaatgaaggagctcgcgaggcgagttgatacagagtcagaattttataaatagcccactcaaccat 21067366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 15853537 - 15853333
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  |||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15853537 caactcgcaatggcgagtggaaggcgagcccactcgccatggtgaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 15853438  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  15853437 cacaaacccaatggcgaaggaacctcaactcgccctggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 15853338  T
Q  327 accat 331  Q
    |||||    
T  15853337 accat 15853333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 36781417 - 36781621
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36781417 caactcgcaatggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtttaccctctcacagctgacgtgg 36781516  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  36781517 cacaaacccaatggcgaaggaacctcaactcgccctggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 36781616  T
Q  327 accat 331  Q
    |||||    
T  36781617 accat 36781621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 43268922 - 43268643
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| ||  ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  43268922 atcactcgcctccaactcgccatggcaagtatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 43268825  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| | || | | ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43268824 gcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcctcttacagctgacgtggcacaaacccaatggcgaaggaac 43268725  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  43268724 ctcaactcgccatggcgattgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 43268643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 42930615 - 42930818
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42930615 caactcgcaatggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtt-agcctctcacagctgacgtgg 42930713  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  42930714 cacaaacccaatggcgaaggaacctcaactcgccctggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 42930813  T
Q  327 accat 331  Q
    |||||    
T  42930814 accat 42930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 52 - 376
Target Start/End: Original strand, 2020606 - 2020942
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  2020606 atcactcgcctctaactcgccatggcgagcttcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 2020704  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||||  |||||||||||| |||   | |||||||||||||||||||||||||||| |   |||||| |||||||||||||||||||||| |||||||||    
T  2020705 cgagcgaactcgccatggcgaatatgtatactcgcgaggcgagttagggcggtttaactcttcacagatgacgtggcacaaacccaatggtgaaggaacc 2020804  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacc-----------atacttagtt 339  Q
    ||||||||||||| |||||||| ||||||||||||| |||| || |||| |||||||||||||||||||||||||||||           ||||||||||    
T  2020805 tcaactcgccatgacgaatgaaagagctcgcgaggcaagttaatgcagaatcagaattctataaatagcccactcaaccatttcattgatatacttagtt 2020904  T
Q  340 tt-atcttagtttttcatagtttttcacttgtaatatt 376  Q
    || |||||||||||||||||||||||||||||||||||    
T  2020905 ttaatcttagtttttcatagtttttcacttgtaatatt 2020942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 128 - 376
Target Start/End: Original strand, 21341174 - 21341422
Alignment:
Q  128 caactcgcatggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtgg 226  Q
    ||||||||||||||||| ||||||||||  |||||||||||| ||||| | |||||||||||||||||||||||  |||| ||| |||||||||||||||    
T  21341174 caactcgcatggcgagttgaaggcgagccaactcgccatggcgaatgattgtactcgcgaggcgagttagggcgacttagactcctcacagctgacgtgg 21341273  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  21341274 cacaaaaccaatggtgaaggaacctcaactcgccatggcgaatgaagaagctcgcgaggcgaattgatgcagaatcagaattctataaatagcccactca 21341373  T
Q  327 accatacttagtt--ttatcttagtttttcatagtttttcacttgtaatatt 376  Q
    |||||  ||  ||    ||||||||||||||||| |||||||||||||||||    
T  21341374 accat--ttcattaagaatcttagtttttcatag-ttttcacttgtaatatt 21341422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 187 - 331
Target Start/End: Complemental strand, 29485822 - 29485678
Alignment:
Q  187 aggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggc 286  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29485822 aggcgagttagggcagtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggc 29485723  T
Q  287 gagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  29485722 gagttgatgcagagtcagaattgtataaatagcccactcaaccat 29485678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 2158685 - 2158406
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  2158685 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 2158588  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  2158587 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 2158488  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  2158487 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 2158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 2165101 - 2164822
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  2165101 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 2165004  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  2165003 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 2164904  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  2164903 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 2164822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 12951872 - 12951593
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  12951872 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 12951775  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  12951774 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 12951675  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||| ||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  12951674 ttcaactcgccatgacgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 12951593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 34840404 - 34840683
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  34840404 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 34840501  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    ||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  34840502 gcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 34840601  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  34840602 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 34840683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 45013057 - 45012778
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  45013057 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 45012960  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   |||||||||| |||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  45012959 gcgagcttactcgccatggcgaatggaaggactcgcgaggggagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 45012860  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  45012859 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 45012778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 136 - 331
Target Start/End: Original strand, 34834044 - 34834239
Alignment:
Q  136 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 235  Q
    ||||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||    
T  34834044 atggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaaccc 34834143  T
Q  236 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  34834144 aatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 34834239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 13901121 - 13901395
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| || ||||| ||||    
T  13901121 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatgacgagtagaag 13901218  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| | || | | ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||| |||    
T  13901219 gcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcccctcacagctgacgtggcacaaacccaatggggaagtaac 13901318  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     |||||||||||||| |||||||  |||||     |||||||||| ||||||||||||||||||||||||||||||||||||    
T  13901319 ttcaactcgccatggtgaatgaagtagctc-----gcgagttgatgcagagtcagaattctataaatagcccactcaaccat 13901395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 29485914 - 29485868
Alignment:
Q  56 ctcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  29485914 ctcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 29485868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 34833960 - 34834010
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||    
T  34833960 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 34834010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 11909264 - 11909356
Alignment:
Q  179 tactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatg 270  Q
    |||||||||||||||||||||||| | |  || |||| ||||||||||||| ||||||| ||  |||| |||  |||||| ||||||||||||    
T  11909264 tactcgcgaggcgagttagggcggctaaaactcctcagagctgacgtggcagaaacccactgatgaagtaacagcaactcaccatggcgaatg 11909356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 376
Target Start/End: Original strand, 21067381 - 21067412
Alignment:
Q  345 ttagtttttcatagtttttcacttgtaatatt 376  Q
    ||||||||||||||||||||||||||||||||    
T  21067381 ttagtttttcatagtttttcacttgtaatatt 21067412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 11909160 - 11909200
Alignment:
Q  136 atggcgagtggaaggcgagcttactcgccatggcaaatgaa 176  Q
    ||||||||||||||||||||  |||||||||||||| ||||    
T  11909160 atggcgagtggaaggcgagcaaactcgccatggcaagtgaa 11909200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 34744644 - 34744692
Alignment:
Q  219 tgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcga 267  Q
    |||||||||| ||||||||||| |||| || |||| |||||||||||||    
T  34744644 tgacgtggcagaaacccaatggtgaagcaagctcacctcgccatggcga 34744692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 52 - 324
Target Start/End: Complemental strand, 71500 - 71228
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  71500 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcatttgccctcaactcgcatggcgagtggaaggc 71401  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| ||||| |||||||||||| || ||||||||||||||||||| ||| | || |   |||||| |||||||||||||||||||||| ||||||||||    
T  71400 gagcatactcaccatggcaaatggatgtactcgcgaggcgagttagcgcgatctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 71301  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccact 324  Q
    ||||||||||||||||||||| |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  71300 caactcgccatggcgaatgaaggagctcgcgaggcgagtgcatgcagaatcagaattctataaatagcccact 71228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 50764 - 50485
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  50764 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 50667  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  50666 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 50567  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  50566 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 50485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 7e-99; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 21643579 - 21643301
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| | |   |||||  ||||  ||||||||| |||| ||||||||    
T  21643579 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagaatgcaacaaagattaca--cgccaccaactcgcaatggctagtggaag 21643482  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| | || |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21643481 gcgagcttactcgccatggcgagtgcattt-ctcgcgaggcgagctagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 21643383  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21643382 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaaccat 21643301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 66 - 331
Target Start/End: Complemental strand, 19090843 - 19090578
Alignment:
Q  66 actcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggcgagcttactcgcca 165  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  19090843 actcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggcgagcatactcgcca 19090744  T
Q  166 tggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggc 265  Q
    |||| | || || |||| ||||||||||||||||| || || |   |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19090743 tggcgagtggatgtacttgcgaggcgagttagggcagtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacctcaactcgccatggc 19090644  T
Q  266 gaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||| |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  19090643 gaatgaaggagctcgcgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat 19090578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 36876617 - 36876338
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    ||| | |  ||||||  ||||  ||||||||| |||||||||| ||    
T  36876617 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccataatgcaacaaaatttaca--cgccaccaactcgcaatggcgagtggcag 36876520  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| | || | | || ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36876519 gcgagcttactcgccatggcgagtggaatgacccgcgaggcgagctagggcggtttagccgctcacagctgacgtggcacaaacccaatggcgaaggaac 36876420  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36876419 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 36876338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 14299967 - 14299688
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||||||  ||||  |    | | ||| ||  ||||||||| ||||||||||||||    
T  14299967 atcactcgcctccaactcgccatagcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcaccaccaactcgcaatggcgagtggaagg 14299869  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    ||||   |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14299868 cgagaaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 14299769  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  14299768 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 14299688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 14288782 - 14288503
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgc-atggcgagtggaagg 150  Q
    ||||||||||||||||||||||| || ||| |||||||  |||||||||||  ||||  |    | | ||| ||  |||||||| |||||||||||||||    
T  14288782 atcactcgcctccaactcgccatagcaagcatcaaaggcaagcaattccagtaagcatcaaagat-ccttcaccaccaactcgcaatggcgagtggaagg 14288684  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    ||||   |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14288683 cgagaaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 14288584  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  14288583 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 14288503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 57 - 331
Target Start/End: Original strand, 8192117 - 8192390
Alignment:
Q  57 tcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 155  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  8192117 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 8192215  T
Q  156 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 255  Q
      |||||||||||| | || | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8192216 acactcgccatggcgagtggaatgactcgcgaggcgagt-agggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 8192314  T
Q  256 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8192315 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 8192390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 9642150 - 9642354
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  ||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9642150 caactcgcaatggcgagtggaaggcgagcccactcgtcatggcgaatgattttactcacgaggcgagttagggcggtttagcctctcacagctgacgtgg 9642249  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  9642250 cacaaacccaatggcgaaggaacctcaactcgccctggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 9642349  T
Q  327 accat 331  Q
    |||||    
T  9642350 accat 9642354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 57 - 331
Target Start/End: Original strand, 8184557 - 8184830
Alignment:
Q  57 tcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 155  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  8184557 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 8184655  T
Q  156 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 255  Q
      ||| |||||||| | || | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8184656 acactagccatggcgagtggaatgactcgcgaggcgagt-agggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 8184754  T
Q  256 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8184755 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 8184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 136 - 331
Target Start/End: Complemental strand, 23613366 - 23613171
Alignment:
Q  136 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 235  Q
    ||||||||||||||||||||  |||||||||||| | || | | |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  23613366 atggcgagtggaaggcgagcaaactcgccatggcgagtggaatgactcgcgaggcgagctagggaggtttagcctctcacagctgacgtggcacaaaccc 23613267  T
Q  236 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23613266 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcggaattctataaatagcccactcaaccat 23613171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 6020140 - 6020291
Alignment:
Q  180 actcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 279  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6020140 actcgcgaggcgagttagggcggtttagcctctcacatctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 6020239  T
Q  280 gcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  6020240 gcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 6020291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 52 - 328
Target Start/End: Original strand, 3923255 - 3923531
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||    
T  3923255 atcactcgcctccaactcgccatggcaagcaacaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaagg 3923353  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    ||| |  |||||||||||| ||||  | |||||||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3923354 cgaacaaactcgccatggcgaatgtgtctactcgcgaggcgagtaagagcagtttagcctctcaccgctgacgtggcacaaacccaatggcgaaggaacc 3923453  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaac 328  Q
    | |||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  3923454 ttaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactcaac 3923531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 128 - 376
Target Start/End: Complemental strand, 15950135 - 15949884
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| ||||||||| ||||| |||  |||||||||||| ||||  | |||||||||||||||||||||||||||| |   ||| || ||| ||||    
T  15950135 caactcgcaatggcgagtgaaaggcaagcgaactcgccatggcgaatgtgtctactcgcgaggcgagttagggcggtttaactcttcatagatgatgtgg 15950036  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  15950035 cacaaacccaatggtgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagttgatgtagagtcagaattctataaatagcccactca 15949936  T
Q  327 accatacttagtttt---atcttagtttttcatagtttttcacttgtaatatt 376  Q
    ||||| || ||||||    | ||||||||||||||||||||||||||||||||    
T  15949935 accat-ctcagtttttgggtattagtttttcatagtttttcacttgtaatatt 15949884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 1380021 - 1379742
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  1380021 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 1379924  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  1379923 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 1379824  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  1379823 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 1379742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 5049060 - 5049339
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  5049060 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 5049157  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  5049158 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 5049257  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  5049258 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 5049339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 6796512 - 6796233
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  6796512 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 6796415  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  6796414 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 6796315  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  6796314 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 6796233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 179 - 376
Target Start/End: Complemental strand, 15915562 - 15915363
Alignment:
Q  179 tactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagct 278  Q
    |||||||||||||||||||||||||||| |   |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  15915562 tactcgcgaggcgagttagggcggtttaactcttcacagatgacatggcacaaacccaatggtgaaggaacctcaactcgccatggcgaatgaaggagct 15915463  T
Q  279 cgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccatacttagtttt---atcttagtttttcatagtttttcacttgtaatat 375  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||    | ||||||||||||||||||||| |||||||||    
T  15915462 tgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaatcat-ctcagtttttgggtattagtttttcatagtttttcaattgtaatat 15915364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 2447722 - 2447443
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||| ||| ||||    
T  2447722 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggctagtagaag 2447625  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  2447624 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 2447525  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  2447524 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 2447443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 8141608 - 8141887
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  8141608 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 8141705  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  8141706 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 8141805  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||| ||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  8141806 ttcaactcgccatggcgattgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 8141887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 55 - 331
Target Start/End: Complemental strand, 26603045 - 26602768
Alignment:
Q  55 actcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcga 153  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| ||  ||||  |    | | ||||||  ||||| ||| |||||||||||||||||    
T  26603045 actcgcctccaactcgccatggcgagcagcaaaggcgagcaattctagtaagcatcaaagatcc-ttcgccaccaacttgcaatggcgagtggaaggcga 26602947  T
Q  154 gcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctca 253  Q
    ||  |||||||||||| ||||  | || |||||||| |||||||||||||||| |   |||||| |||||||||||||||||||||| ||||||||||||    
T  26602946 gcgaactcgccatggcgaatgtgtctattcgcgaggggagttagggcggtttaactcttcacagatgacgtggcacaaacccaatggtgaaggaacctca 26602847  T
Q  254 actcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaat-agcccactcaaccat 331  Q
    |||| ||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  26602846 actcaccatggcgaattaaggagctcgcgaggcgagttgatgcagaatcagaattctataaataagcccactcaaccat 26602768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 48346247 - 48346521
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  48346247 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 48346344  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    ||||||||||||||| |||| || ||     |||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  48346345 gcgagcttactcgccgtggcgaagga-----ctcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 48346439  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  48346440 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 48346521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 48352631 - 48352905
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  48352631 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 48352728  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    ||||||||||||||| |||| || ||     |||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  48352729 gcgagcttactcgccgtggcgaagga-----ctcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 48352823  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  48352824 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 48352905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 37026673 - 37026511
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||||||||| |  |||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||  || ||    
T  37026673 actcgccatggcgagggaatgtactcgcgaggcgagttagggcggcttaggcttctcacagctgacgtggcacaaacccaatggtgaaggaactgca-ct 37026575  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaa-ttctataaatagc 319  Q
    |||| ||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||    
T  37026574 cgccctggcgaatgaaggagctcgcgaggcgagttgatacagaattagaatttctataaatagc 37026511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 174 - 319
Target Start/End: Original strand, 22853497 - 22853642
Alignment:
Q  174 gaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaa 272  Q
    |||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  22853497 gaatgtactcgcgaggcgagttagggcggcttaggcttctcacagctgacgtggcacaaacccaatggtgaaggaacttca-ctcgccctggcgaatgaa 22853595  T
Q  273 tgagctcgcgaggcgagttgatacagagtcagaattctataaatagc 319  Q
     ||||||||||||||||||||| |||| | | |||| ||||||||||    
T  22853596 ggagctcgcgaggcgagttgatgcagaattaaaattttataaatagc 22853642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 39433854 - 39433693
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||||||||| |  |||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||| ||||| |||||||| | | ||    
T  39433854 actcgccatggctagggaatgtactcgcgaggcgagttagggcggcttaggcttctcacagctgacgtggcacaaacctaatggtgaaggaacttta-ct 39433756  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagc 319  Q
    |||| ||||||||||| |||||||||||||||||||||||||| | |||| |||||| |||||    
T  39433755 cgccttggcgaatgaaggagctcgcgaggcgagttgatacagaattagaagtctatatatagc 39433693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 228 - 362
Target Start/End: Original strand, 1947980 - 1948115
Alignment:
Q  228 acaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 327  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||| ||||||| |||||||||| ||||||||    
T  1947980 acaaacccaatggtgaaggaacctcaactcgccatggcgaatgaaggagctcacgaggtgagttcatgcagaatcagaatactataaatagaccactcaa 1948079  T
Q  328 ccatacttagtttt--atcttagtttttcatagtttt 362  Q
    ||||  | ||||||  |||||||||||||||| ||||    
T  1948080 ccat-ttcagtttttaatcttagtttttcatactttt 1948115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 321
Target Start/End: Original strand, 33849905 - 33850069
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||||||||| | || || ||||||||||||||||||||||||  ||| ||| |||||  |||||||||||||||||| ||| |||||||| | ||||    
T  33849905 actcgccatggcgagtgcatgtactcgcgaggcgagttagggcggcctagactcctcacaaatgacgtggcacaaacccactggtgaaggaacttaaact 33850004  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaa-ttctataaatagccc 321  Q
    |||||||| ||||||| |||||||||||||||| |||  |||| |||||| || ||||||||||||    
T  33850005 cgccatggagaatgaaggagctcgcgaggcgaggtgaatcaga-tcagaatttatataaatagccc 33850069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 8184489 - 8184539
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  8184489 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 8184539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 8192049 - 8192099
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  8192049 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 8192099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 37027217 - 37027168
Alignment:
Q  53 tcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  37027217 tcactcgcctccaactcgccatggcgagcagcaaaggtgaggaattccag 37027168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 15953539 - 15953492
Alignment:
Q  55 actcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||||    
T  15953539 actcgcctccaactcgccatggcgagcagcaaaggcgagcaattccag 15953492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 1386125 - 1386075
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||    
T  1386125 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 1386075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 6020030 - 6020080
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||||||    
T  6020030 atcactcgcctccaactcgccatagcaagcatcaaaggcgagcaattccag 6020080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 22853274 - 22853321
Alignment:
Q  53 tcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  22853274 tcactcgcctccaactcgccatggccag--tcaaaggtgagcaattccag 22853321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 39434099 - 39434057
Alignment:
Q  53 tcactcgcctccaactcgccatggcgagcttcaaaggtgagca 95  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  39434099 tcactcgcctccaactcgccatggcgagcagcaaaggtgagca 39434057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 15925213 - 15925160
Alignment:
Q  55 actcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca 108  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| || |||||    
T  15925213 actcgcctccaactcgccatggcgagcagcaaaggcgagcaattctagtgagca 15925160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 376
Target Start/End: Original strand, 22853671 - 22853700
Alignment:
Q  347 agtttttcatagtttttcacttgtaatatt 376  Q
    ||||||||||||||||||||||||||||||    
T  22853671 agtttttcatagtttttcacttgtaatatt 22853700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 33850096 - 33850132
Alignment:
Q  338 ttttatcttagtttttcatagtttttcacttgtaata 374  Q
    |||||||| |||||||||||||||||||| |||||||    
T  33850096 ttttatctcagtttttcatagtttttcacgtgtaata 33850132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 45434413 - 45434369
Alignment:
Q  277 ctcgcgaggcgagttgatacagagtcagaattctataaatagccc 321  Q
    ||||||||||||||| || |||| | |||||||||||||||||||    
T  45434413 ctcgcgaggcgagtttatgcagattaagaattctataaatagccc 45434369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 11304 - 11583
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11304 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 11403  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 251  Q
    |||| || |||||||||| |||| || ||||||| |||| ||||||||||||||| |   |||||  |||||||||| ||||||| ||| |||||||||     
T  11404 gagcatagtcgccatggcgaatggatgtactcgcaaggcaagttagggcggtttaactcttcacatatgacgtggcataaacccactggtgaaggaacca 11503  T
Q  252 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||| ||| | | ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  11504 caactcgccatggcgaatgaaggagtttgtgaggcgagttgatgcagaatcagaattctataaatagcccactcaaccat 11583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 2e-90; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 4737539 - 4737818
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  4737539 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 4737637  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||||  |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4737638 cgagcaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 4737737  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  4737738 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattatataaatagcccactcaaccat 4737818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 136 - 328
Target Start/End: Original strand, 34710801 - 34710993
Alignment:
Q  136 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 235  Q
    |||||||||||||||||||||||||||||||||| | || | | ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  34710801 atggcgagtggaaggcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcctctcacagctgacgtggcacaaaccc 34710900  T
Q  236 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaac 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34710901 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaac 34710993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 32327641 - 32327920
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  32327641 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 32327738  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| | |  | | ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32327739 gcgagcttactcgccatggcgagtagaatgactcgcgaggcgagtgaaggcggtttagcctcttacagctgacgtggcacaaacccaatggcgaaggaac 32327838  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  32327839 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 32327920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 4187684 - 4187480
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  4187684 caactcgcaatggcgagtggaaggcgagcttactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 4187585  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||   ||||| ||||||||||||||||||||||||||    
T  4187584 cacaaacccaatggcgaaggaacttcaactcgccatggtgaatgaaggagctcgcgaggcgagttaggacagaatcagaattctataaatagcccactca 4187485  T
Q  327 accat 331  Q
    |||||    
T  4187484 accat 4187480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 7061663 - 7061938
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  7061663 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 7061760  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| | || |   ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  7061761 gcgagcttactcgccatggcgagtggaaggactcgcgaggcgagtgaaggcggtttagcctctcacagctgacgtggcacaaacccaatggggaagaaac 7061860  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 327  Q
     ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7061861 ttcaactcgccatggcgaatgaagtagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaa 7061938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 7068849 - 7069124
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  7068849 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 7068946  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| | || |   ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  7068947 gcgagcttactcgccatggcgagtggaaggactcgcgaggcgagtgaaggcggtttagcctctcacagctgacgtggcacaaacccaatggggaagaaac 7069046  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 327  Q
     ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7069047 ttcaactcgccatggcgaatgaagtagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaa 7069124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 52 - 302
Target Start/End: Original strand, 4668556 - 4668806
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  4668556 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 4668654  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||||  |||||||||||| | || | | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4668655 cgagcaaactcgccatggcgagtggaatgactcgcaaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 4668754  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtc 302  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4668755 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtc 4668806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 31548841 - 31548690
Alignment:
Q  180 actcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31548841 actcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagccc 31548742  T
Q  280 gcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  31548741 gcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 31548690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 1427571 - 1427850
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  1427571 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 1427668  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  1427669 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 1427768  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  1427769 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 1427850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 4019383 - 4019662
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  4019383 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 4019480  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  4019481 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 4019580  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  4019581 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 4019662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 4025809 - 4026088
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  4025809 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 4025906  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  4025907 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 4026006  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  4026007 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 4026088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 4717688 - 4717967
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  4717688 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 4717785  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  4717786 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 4717885  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  4717886 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 4717967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 9863995 - 9864200
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 225  Q
    ||||||||| |||||||| ||||||||| ||  |||||||||| |  |||  |||||||||||||||||||||||||||| || |||||| |||||||||    
T  9863995 caactcgcaatggcgagtagaaggcgagtttgttcgccatggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcactgctgacgtg 9864094  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  9864095 gcacaaacccaatggggaagaaacttcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactc 9864194  T
Q  326 aaccat 331  Q
    ||||||    
T  9864195 aaccat 9864200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 34649874 - 34649595
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  34649874 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 34649777  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  34649776 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 34649677  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||| ||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  34649676 ttcaactcaccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 34649595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 34656325 - 34656046
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  34656325 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 34656228  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||  ||| |||    
T  34656227 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatgggaaagaaac 34656128  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  34656127 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 34656046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 31128575 - 31128726
Alignment:
Q  180 actcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 279  Q
    ||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||  |||||    
T  31128575 actcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtggcacaaacccaatggggaagaaacttcaactcgccatggcgaaggaagtagctc 31128674  T
Q  280 gcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31128675 gcgaggcgagttgatgcagagtcagaattctataaatagcccactcaaccat 31128726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 128 - 327
Target Start/End: Original strand, 13671048 - 13671249
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 225  Q
    ||||||||| |||||||| ||||| ||| ||  |||||||||| | || |  |||||||||||||||||||||||||||| || |||||  | |||||||    
T  13671048 caactcgcaatggcgagtagaaggtgagtttgttcgccatggcgagtgcaagtactcgcgaggcgagttagggcggtttaagcttctcagtgatgacgtg 13671147  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||| ||||||| ||||||||| ||| |||| | ||||||||||||||||| |||||    
T  13671148 gcacaaacccaatggtgaaggaacttcaactcgccatgacgaatgaaggagctcgggaggcgagtggatgcagatttagaattctataaatagctcactc 13671247  T
Q  326 aa 327  Q
    ||    
T  13671248 aa 13671249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 52 - 327
Target Start/End: Original strand, 21261731 - 21262007
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagc--actagttttacattcgccctcaactcgca-tggcgagtggaa 148  Q
    |||||| |||||||||||||||||||||||  |||||| ||||||||||||  |||  || |   |||||  ||||  |||||| || |||||||| |||    
T  21261731 atcacttgcctccaactcgccatggcgagcagcaaaggcgagcaattccagt-agccaacaaagattaca--cgccaccaactcacaatggcgagtagaa 21261827  T
Q  149 ggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaagga 247  Q
    ||||||  |  |||||||||| | || |  ||||||||||||||||||||||||||||  || ||||| | |||||||||| ||||||||||| ||||||    
T  21261828 ggcgagtatgttcgccatggcgagtggaagtactcgcgaggcgagttagggcggtttaaacttctcactgatgacgtggcataaacccaatggtgaagga 21261927  T
Q  248 acctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 327  Q
    || |||  ||||||||||||||||| |||||||||||||| || |||||||| | |||| ||||||||||||||| ||||    
T  21261928 acttcatttcgccatggcgaatgaaggagctcgcgaggcgggtggatacagatttagaaatctataaatagcccattcaa 21262007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 174 - 319
Target Start/End: Complemental strand, 27670982 - 27670837
Alignment:
Q  174 gaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaa 272  Q
    |||| |||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  27670982 gaatgtactcgcgaggcgagttagggcggcttaggcttctcacggctgacgtggcacaaacccaatggtgaaggaacttca-ctcgccctggcgaatgaa 27670884  T
Q  273 tgagctcgcgaggcgagttgatacagagtcagaattctataaatagc 319  Q
     ||||||||||| ||| ||||| |||| | |||||||||||||||||    
T  27670883 ggagctcgcgagacgatttgatgcagaattagaattctataaatagc 27670837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 294
Target Start/End: Original strand, 1166694 - 1166891
Alignment:
Q  97 ttccagggagcactagttttacattcgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagtt 195  Q
    |||||| |||||| |||||| ||  |||||||||||||||  ||||| ||||||||||||  |||||| ||||  | || ||||||||||||||||||||    
T  1166694 ttccagagagcaccagtttt-cacacgccctcaactcgcaaaggcgaatggaaggcgagca-actcgcaatggtgagtgcatttactcgcgaggcgagtt 1166791  T
Q  196 agggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgat 294  Q
    ||||||| | |  ||| ||| || ||||||| |||||||||| ||| |||| ||||||||||||||| || |||||||    ||||||||||||||||||    
T  1166792 agggcggctaaaactcctcagaggtgacgtgtcacaaacccactggtgaagaaacctcaactcgccaaggtgaatgaagctactcgcgaggcgagttgat 1166891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 4668493 - 4668543
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  4668493 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 4668543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 4737476 - 4737526
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  4737476 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 4737526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 31548940 - 31548890
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||||||    
T  31548940 atcactcgcctccaactcgccatagcaagcatcaaaggcgagcaattccag 31548890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 27671172 - 27671123
Alignment:
Q  53 tcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||||||  || ||| ||||||||||||    
T  27671172 tcactcgcctccaactcgccatggcgagcagcacaggcgagcaattccag 27671123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 14121808 - 14121896
Alignment:
Q  179 tactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcga 267  Q
    ||||||||||||||| || |||||  || |||||   ||||||||||||| |||||||  || |||| || ||| ||||||||||||||    
T  14121808 tactcgcgaggcgagctaaggcggcctaacctcttcaagctgacgtggcagaaacccataggggaagaaagctcgactcgccatggcga 14121896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 37367470 - 37367749
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||    
T  37367470 atcactcgcctccaactcgccatagcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaagg 37367568  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||||  |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37367569 cgagcaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 37367668  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37367669 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 37367749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 55462007 - 55462211
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55462007 caactcgcaatggcgagtggaaggcgagcccactcgccatggcaaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 55462106  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  55462107 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 55462206  T
Q  327 accat 331  Q
    |||||    
T  55462207 accat 55462211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 13595095 - 13594891
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13595095 caactcgcaatggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 13594996  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  13594995 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 13594896  T
Q  327 accat 331  Q
    |||||    
T  13594895 accat 13594891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 136 - 331
Target Start/End: Complemental strand, 8104859 - 8104664
Alignment:
Q  136 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 235  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8104859 atggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 8104760  T
Q  236 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  8104759 aatggcgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactcaaccat 8104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 57 - 331
Target Start/End: Complemental strand, 27591368 - 27591094
Alignment:
Q  57 tcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 155  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  27591368 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaaggcgaga 27591270  T
Q  156 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 255  Q
      |||||||||||| | || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27591269 aaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 27591170  T
Q  256 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  27591169 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 27591094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 30239288 - 30239009
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||   ||||| ||||||||||||  |||| | |   |||||  ||||  ||||||||| |||||||||||||    
T  30239288 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccagaaagcaacaaagattaca--cgccaccaactcgcaatggcgagtggaag 30239191  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    ||||||  |||||||||||| | || | | |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30239190 gcgagcaaactcgccatggcgagtggaatgactcgcgaggcgagctagggcagtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 30239091  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30239090 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcggaattctataaatagcccactcaaccat 30239009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 57 - 331
Target Start/End: Complemental strand, 17457912 - 17457639
Alignment:
Q  57 tcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 155  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  17457912 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 17457814  T
Q  156 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 255  Q
      |||||||||||| | || | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17457813 acactcgccatggcgagtggaatgactcgcgaggcgagt-agggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 17457715  T
Q  256 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  17457714 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 17457639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 55 - 331
Target Start/End: Complemental strand, 7781384 - 7781107
Alignment:
Q  55 actcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcga 153  Q
    ||||||||||||||||||||||||||   |||||| ||||||||||||   |||  |    | | ||||||  ||||||||| |||||||||||||||||    
T  7781384 actcgcctccaactcgccatggcgagtagcaaaggcgagcaattccagtaggcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaaggcga 7781286  T
Q  154 gcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctca 253  Q
    ||  |||||||||||| ||||  | |||||| || |||||||||||||||||| |   |||||| |||||||||||||||||||||| ||||||||||||    
T  7781285 gcgaactcgccatggcgaatgtgtctactcgtgaagcgagttagggcggtttaactcttcacagatgacgtggcacaaacccaatggtgaaggaacctca 7781186  T
Q  254 actcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaat-agcccactcaaccat 331  Q
    ||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||||| ||||||    
T  7781185 actcgccatggcgaatgaaggagctcgtgaggcgagttgatgcagaatcagaattctataaataagcccacttaaccat 7781107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 41374060 - 41373781
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  41374060 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 41373963  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  41373962 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 41373863  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||| ||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  41373862 ttcaactcgccacggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 41373781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 37355569 - 37355774
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 225  Q
    ||||||||| |||||||| ||||||||| ||  |||||||||| |  |||  |||||||||||||||||||||||||||| || |||||  |||||| ||    
T  37355569 caactcgcaatggcgagtagaaggcgagtttgttcgccatggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcattgctgacatg 37355668  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    || |||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  || |||| |||||||||||||||||||||||||    
T  37355669 gcgcaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagtgaatgcagactcagaattctataaatagcccactc 37355768  T
Q  326 aaccat 331  Q
    ||||||    
T  37355769 aaccat 37355774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 179 - 327
Target Start/End: Complemental strand, 16406281 - 16406132
Alignment:
Q  179 tactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagc 277  Q
    ||||| |||||||||||||||||||||| || |||||| | |||||||||||||||||||||| |||||||| ||||||||||||||||||||||  |||    
T  16406281 tactcacgaggcgagttagggcggtttaagcttctcactgatgacgtggcacaaacccaatggtgaaggaacttcaactcgccatggcgaatgaagaagc 16406182  T
Q  278 tcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 327  Q
    ||||||||||||| ||| || | | ||||||||||||||||| |||||||    
T  16406181 tcgcgaggcgagtggatgcaaatttagaattctataaatagctcactcaa 16406132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 122 - 299
Target Start/End: Original strand, 5659761 - 5659939
Alignment:
Q  122 cgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagct 219  Q
    |||||||||||||||  ||||| ||||||||||||  |||||| |||||||||| |||||||||||||||||||||||| ||   |  || |||| |  |    
T  5659761 cgccctcaactcgcaaaggcgaatggaaggcgagca-actcgcaatggcaaatgcatttactcgcgaggcgagttagggtggccaaaactcctcaaaagt 5659859  T
Q  220 gacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacaga 299  Q
    ||||||||||||||| | ||| |||||||||| ||||||||| ||| ||||||    |||||||||||||||||| ||||    
T  5659860 gacgtggcacaaacctactggtgaaggaaccttaactcgccaaggcaaatgaagttactcgcgaggcgagttgatgcaga 5659939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 293
Target Start/End: Original strand, 30210841 - 30210947
Alignment:
Q  188 ggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggc 286  Q
    |||||||||||||||  ||| ||| |||||| |||||||||||||||| | ||| |||||||| | |||||||||||||||||||| || ||||||||||    
T  30210841 ggcgagttagggcggcctagactcctcacagatgacgtggcacaaacctactggtgaaggaacttaaactcgccatggcgaatgaaggaactcgcgaggc 30210940  T
Q  287 gagttga 293  Q
    |||||||    
T  30210941 gagttga 30210947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 320
Target Start/End: Original strand, 36754132 - 36754233
Alignment:
Q  219 tgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatag 318  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    ||| |||||||||||||  ||||    |||||||||||||||    
T  36754132 tgacgtggcacaaacccactggtgaagtaacctcaactcgccatggcgaatgaagttactcacgaggcgagttgaggcagaacaggaattctataaatag 36754231  T
Q  319 cc 320  Q
    ||    
T  36754232 cc 36754233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 27591436 - 27591386
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  27591436 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 27591386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 17457980 - 17457930
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| ||| | ||||| ||||||||||||    
T  17457980 atcactcgcctccaactcgccatggcaagcattaaaggcgagcaattccag 17457930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 40975903 - 40976021
Alignment:
Q  149 ggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaa 248  Q
    |||||||| ||| |||||||| | | || ||||||||||||||||||| |||||  ||  | || | ||||||||||||| ||| ||| |||  ||| ||    
T  40975903 ggcgagctaacttgccatggcgagtaaaattactcgcgaggcgagttaaggcggcctaatcccttaaagctgacgtggcagaaatccactgggaaagaaa 40976002  T
Q  249 cctcaactcgccatggcga 267  Q
     |||||||| |||||||||    
T  40976003 gctcaactcaccatggcga 40976021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 57 - 331
Target Start/End: Original strand, 36424894 - 36425168
Alignment:
Q  57 tcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 155  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  36424894 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 36424992  T
Q  156 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 255  Q
      |||||||||||| | || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36424993 aaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 36425092  T
Q  256 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36425093 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 36425168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 36020896 - 36021175
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  36020896 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 36020993  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| | || | | ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36020994 gcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcctcttacagctgacgtggcacaaacccaatggcgaaggaac 36021093  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36021094 ctcaactcgccatggcaaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 36021175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 6463724 - 6464003
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  6463724 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 6463821  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  6463822 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 6463921  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  6463922 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 6464003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 7312346 - 7312142
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 226  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  7312346 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 7312247  T
Q  227 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 326  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  7312246 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 7312147  T
Q  327 accat 331  Q
    |||||    
T  7312146 accat 7312142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 187 - 331
Target Start/End: Original strand, 11357467 - 11357611
Alignment:
Q  187 aggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggc 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  11357467 aggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaagtagctcgcgaggc 11357566  T
Q  287 gagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
    ||||  || |||| ||||||||||||||||||| |||||||||||    
T  11357567 gagtgaatgcagactcagaattctataaatagctcactcaaccat 11357611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 8012468 - 8012747
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  8012468 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 8012565  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  8012566 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 8012665  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||| ||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  8012666 ttcaactcgccatggcaaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 8012747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 36004632 - 36004911
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| || ||||| ||||    
T  36004632 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatgacgagtagaag 36004729  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  36004730 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 36004829  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  36004830 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 36004911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 128 - 376
Target Start/End: Original strand, 16709904 - 16710163
Alignment:
Q  128 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 225  Q
    ||||||||| |||||||| ||||||||| ||  ||||| |||| |  |||  |||||||||||||||||||||||||||| || |||||  |||||||||    
T  16709904 caactcgcaatggcgagtagaaggcgagtttgttcgccgtggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcattgctgacgtg 16710003  T
Q  226 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 325  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  || || | |||||||||||||||||||||||||    
T  16710004 gcacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagtgaatgcatactcagaattctataaatagcccactc 16710103  T
Q  326 aaccat---------acttagttttatcttagtttttcatagtttttcacttgtaatatt 376  Q
    ||||||         |||||||||||||||||||| || |||||||||||||||||||||    
T  16710104 aaccatttcaaaaaaacttagttttatcttagtttctcttagtttttcacttgtaatatt 16710163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 52 - 331
Target Start/End: Complemental strand, 36077039 - 36076760
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  36077039 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 36076942  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||  |||| |||    
T  36076941 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatgaggaagaaac 36076842  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     |||||||||||||| |||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  36076841 ttcaactcgccatggtgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 36076760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 53 - 376
Target Start/End: Complemental strand, 1239273 - 1238942
Alignment:
Q  53 tcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgc-atggcgagtggaaggc 151  Q
    ||||||||||||||||||||||||| ||  ||||||| ||||||||||||  | ||  ||   | ||  ||||  |||||||| |||| |||| ||||||    
T  1239273 tcactcgcctccaactcgccatggccag--tcaaaggcgagcaattccagtaaccaacagagat-cacgcgccaccaactcgcaatggtgagtagaaggc 1239177  T
Q  152 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttt-agcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||  |  |||||||||| | ||||  |||||||||||||||||| |||||||| ||| | |||| | |||||||||||||||||||||| ||||||||     
T  1239176 gagtatgttcgccatggcgagtgaaagtactcgcgaggcgagttaaggcggtttaagcttttcactgatgacgtggcacaaacccaatggtgaaggaact 1239077  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat---------acttag-ttt 340  Q
    ||||||||||||||||||||||  |||||||||||||||| || ||||| | |||| ||||||||||||||| |||| |||         | |||| |||    
T  1239076 tcaactcgccatggcgaatgaagaagctcgcgaggcgagtagacacagatttagaactctataaatagcccattcaatcatttctttgggagttagtttt 1238977  T
Q  341 tatcttagtttttcatagtttttcacttgtaatatt 376  Q
    |||||||||||||||||| |||||||||||||||||    
T  1238976 tatcttagtttttcatag-ttttcacttgtaatatt 1238942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 12769855 - 12769713
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttag-cctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||| ||||| | ||||  ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  12769855 actcgcaatggcgagtgaaagtactcgcgaggcgagttagggtggtttaggcctctcacagatgacgtggcacaaacccaatggtgaaggaacttcaact 12769756  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttgatacaga 299  Q
    |||||||||||||||| |||||||||||| |||| ||| ||||    
T  12769755 cgccatggcgaatgaaggagctcgcgaggtgagtggatgcaga 12769713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 15013343 - 15013211
Alignment:
Q  162 gccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgcc 260  Q
    |||||||| | || || |||| |||||||||||||||||||| ||| ||| |||||| |||||||||||||||||| ||| |||||||  | ||||||||    
T  15013343 gccatggcgagtgcatgtacttgcgaggcgagttagggcggtctagactcctcacagatgacgtggcacaaacccactggtgaaggaatttaaactcgcc 15013244  T
Q  261 atggcgaatgaatgagctcgcgaggcgagttga 293  Q
    |||||||||||| ||||||||||||||||||||    
T  15013243 atggcgaatgaaggagctcgcgaggcgagttga 15013211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 321
Target Start/End: Original strand, 45067692 - 45067854
Alignment:
Q  160 tcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcg 258  Q
    |||||||||| | ||||||||||||||||||||||||||||||  ||  || ||||  | ||||||||| |||||  ||||| |||| ||| ||||||||    
T  45067692 tcgccatggcgagtgaatttactcgcgaggcgagttagggcggcctaaacttctcaagggtgacgtggctcaaacttaatggtgaagaaacatcaactcg 45067791  T
Q  259 ccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagccc 321  Q
    |||||||||||| |    ||||||||||||||||||  ||| | |||||||||||||||||||    
T  45067792 ccatggcgaatggagttactcgcgaggcgagttgatgtagattaagaattctataaatagccc 45067854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 12769932 - 12769882
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  12769932 atcattcgcctccaactcgccatggcgagcatcaaaggcgagcaattccag 12769882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 36424826 - 36424876
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  36424826 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 36424876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 15013507 - 15013432
Alignment:
Q  162 gccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaaccca 236  Q
    |||||||| | || || |||| |||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||    
T  15013507 gccatggcgagtgcatgtacttgcgaggcgagttagggcggtctagactcctcacagatgacgtggcacaaaccca 15013432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 7312418 - 7312371
Alignment:
Q  55 actcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    ||||||||||||||||||||||| |||  |||||| ||||||||||||    
T  7312418 actcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 7312371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 52 - 302
Target Start/End: Complemental strand, 8855 - 8605
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 150  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  8855 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 8757  T
Q  151 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 250  Q
    |||||  |||||||||||| | || | | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8756 cgagcaaactcgccatggcgagtggaatgactcgcaaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 8657  T
Q  251 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtc 302  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8656 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtc 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 8918 - 8868
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccag 102  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  8918 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 4153 - 4432
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 149  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||| ||||    
T  4153 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtagaag 4250  T
Q  150 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 249  Q
    |||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||| |||| |||    
T  4251 gcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaacccaatggggaagaaac 4350  T
Q  250 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 331  Q
     ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  4351 ttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 4432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 158 - 293
Target Start/End: Complemental strand, 16116 - 15980
Alignment:
Q  158 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 256  Q
    |||||||||||| | || || ||||||||||||||||||||||||  ||| ||| | |||| |||||||||||||||||| ||| |||||||| ||||||    
T  16116 actcgccatggcgagtgcatgtactcgcgaggcgagttagggcggcctagactccttacagatgacgtggcacaaacccactggtgaaggaacttcaact 16017  T
Q  257 cgccatggcgaatgaatgagctcgcgaggcgagttga 293  Q
    |||||||||||||||| ||||||||||||||||||||    
T  16016 cgccatggcgaatgaaggagctcgcgaggcgagttga 15980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 277
Target Start/End: Complemental strand, 3604 - 3501
Alignment:
Q  174 gaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaa 272  Q
    |||| ||| |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| |||||||| || ||||||| |||||||||||    
T  3604 gaatgtacccgcgaggcgagttagggcggcttaggcttctcacagctgacgtggcacaaacccaatggtgaaggaacttc-actcgccctggcgaatgaa 3506  T
Q  273 tgagc 277  Q
     ||||    
T  3505 ggagc 3501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 3486 - 3442
Alignment:
Q  274 gagctcgcgaggcgagttgatacagagtcagaattctataaatag 318  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||    
T  3486 gagctcgcgaggcgagttgatatagaattagaattctataaatag 3442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 3878 - 3836
Alignment:
Q  53 tcactcgcctccaactcgccatggcgagcttcaaaggtgagca 95  Q
    ||||||||||||||||||||||||||||   ||||||||||||    
T  3878 tcactcgcctccaactcgccatggcgagtagcaaaggtgagca 3836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1487 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 267
Target Start/End: Original strand, 1346 - 1478
Alignment:
Q  135 catggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacc 234  Q
    ||||||||||  | |||||||| ||| |||||||| |   || ||||||||||||||||||| |||||  ||  | |||| | ||||||||||| |||||    
T  1346 catggcgagttcatggcgagctaactagccatggcgagcaaaattactcgcgaggcgagttaaggcggcctaatccctcaaatctgacgtggcagaaacc 1445  T
Q  235 caatggcgaaggaacctcaactcgccatggcga 267  Q
    || |||  ||| || ||||||||||||||||||    
T  1446 cactggtaaagaaagctcaactcgccatggcga 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 11514 - 11551
Alignment:
Q  52 atcactcgcctccaactcgccatggcgagcttcaaagg 89  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  11514 atcactcgcctccaactcgccatggcaagcatcaaagg 11551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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