View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10955_low_26 (Length: 236)
Name: NF10955_low_26
Description: NF10955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10955_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 13300032 - 13299833
Alignment:
| Q |
16 |
aaggacaagtctattgagtcaccttctataccctttgtttgaataagtgttagagattttttaactaaagttcaagtttggtacaccatgatcaatgctt |
115 |
Q |
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| T |
13300032 |
aaggacaagtctattgagtcaccttctataccctttgtttgaataagtgttagagattttttaactaaagttcaagtttggtacaccatg---aatgctt |
13299936 |
T |
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| Q |
116 |
tttctctatactatgctgtcattggcctaacttcatgttctcactaacgacaaagtttatctgttggaatcacaaacaagtaccttatagtttatgtatc |
215 |
Q |
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| T |
13299935 |
ttgctctatactgtgctgtcattggcctaacttcatgttctcactaacgacaaagtttatcagttggaatcacaaacaagtaccttattgtttatgtaac |
13299836 |
T |
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