View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10956_high_8 (Length: 406)
Name: NF10956_high_8
Description: NF10956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10956_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 1 - 391
Target Start/End: Original strand, 35288003 - 35288394
Alignment:
| Q |
1 |
caagatcatgttttccattttgcagatgtaagaggccctccttgtacatccctgttaagcattagccttctctttcctcagacacatttgtatagtcatt |
100 |
Q |
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| T |
35288003 |
caagatcatgttttccattttgcagatgtaagaggccctccttgtacatccctgttaagcattagccttctctttcctcagacacatttgtatagtcatt |
35288102 |
T |
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| Q |
101 |
tgaaataaaaactgtaaataaaaatgcagtttattcaaatctgattggaggtttttgtggatgatgaaaataaattagttggtgcatgatccctgttcat |
200 |
Q |
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| T |
35288103 |
tgaaataaaaactgtaaataaaaatgcagtttattcaaatctgattggaggtttttgtggatgatgaaaataaattagttggtgcatgatccctgttcat |
35288202 |
T |
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| Q |
201 |
cacgatatcatttgatgaaatggaagttattatttcacttgcagaatcattgagttccttctctgcactcattcaaatgggtagctgtgatttgtgcaca |
300 |
Q |
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| T |
35288203 |
cacgatatcatttgatgaaatggaagttattatttcacttgcataatcattgagttccttctctgcactcattcaaatgggtagctgtgatttgtgcaca |
35288302 |
T |
|
| Q |
301 |
ttgcttcatcttctataagactctataatggctttcatacgttgatgtgataaatatgatgaa-ttttaatagtttacggcaatagataatg |
391 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |
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| T |
35288303 |
ttgcttcatcttctataagactctataatggctttcatacgttgatgtgatagatatgatgaatttttaatagcttacggcaatagataatg |
35288394 |
T |
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