View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10956_low_18 (Length: 266)
Name: NF10956_low_18
Description: NF10956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10956_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 35287951 - 35287696
Alignment:
| Q |
1 |
tggttagtaattttcacccttgttgatagcttcctaatccctatnnnnnnncagggacatgtggttcccttcatagcctggcgcaatcaatattagcttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35287951 |
tggttagtaattttcacccttgttgatagcttcctaatccctataaaaaaacagggacatgtggttcccttcatagcctggcgcaatcaatattagcttg |
35287852 |
T |
|
| Q |
101 |
cattgctctccctaagcagactgcaaagtgacctgctccgttgcagttatgtcatacttggcattagcctcaggggtatcttcttcactaggtggaacca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35287851 |
cattgctctccctaagcagactgcaaagtgacctgctccgttgcagttatgtcatacttggcattagcctcaggggtatcttcttcactaggtggaacca |
35287752 |
T |
|
| Q |
201 |
actgccaaaatagtgataaatacttgtcccagtccttcagaatagcctcacctttg |
256 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35287751 |
actgccaaaatagtgataaatacttgtcccagtccttcagaatagcctcacctttg |
35287696 |
T |
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