View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10957_high_36 (Length: 311)
Name: NF10957_high_36
Description: NF10957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10957_high_36 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 25 - 294
Target Start/End: Complemental strand, 7125210 - 7124941
Alignment:
| Q |
25 |
cgtatgaatgtctgtgatgtttaaagtcttatcattttcaatgaaatcactctttcaaaacataacctcccgaacctataatatttgaagaagaccactt |
124 |
Q |
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| T |
7125210 |
cgtatgaatgtctgtgatgtttaaagtcttatcattttcaatgaaatcactctttcaaaacataacctcccgaacctataatatttgaagaagaccactt |
7125111 |
T |
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| Q |
125 |
aaccttaacaaccttcttgtaacctgacaaatcagcccaactttttaacattctaagcgggcgaggaccccagttttcattataaagaaacaaaacaacc |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7125110 |
aaccttaacaaccttcttgtaacctgacaaatcagcccaactttttaacattctaagcgggcgaggaccccagttttcattataaagaaacaaaacaacc |
7125011 |
T |
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| Q |
225 |
ggacaatgatcataaacacctttgtgatcataacaagaaacgatctaactatatacaccatcaccacagt |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7125010 |
ggacaatgatcataaacacctttgtgatcataacaagaaacgatctaactatatacaccatcaccacagt |
7124941 |
T |
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