View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10957_high_65 (Length: 249)
Name: NF10957_high_65
Description: NF10957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10957_high_65 |
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Alignment Details
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 42622762 - 42622525
Alignment:
| Q |
9 |
agatgaaggtatggaagcttgggtgacaatggaaatgcataatatagcttacttggaaaatgatagggagtttctcaaatttgctttgcctaatccttgt |
108 |
Q |
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| T |
42622762 |
agatgaaggtatggaagcttgggtgacaatggaaatgcataatatagcttacttggaaaatgatagggagtttctcaaatttgctttgcctaatccttgt |
42622663 |
T |
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| Q |
109 |
gttacaaacatttagtttataatatatgcgaatgaatgaattagtggatgttttgttttgagaaatgattgaaattacacagctcgagaggaactaatat |
208 |
Q |
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| T |
42622662 |
gttacaaacatttagtttataatatatgcgaatgaatgaattagtggatgttttgttttgagaaatgattgaaattacatagctcgataggaactaatat |
42622563 |
T |
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| Q |
209 |
tcctcaactactagcattgaatatcaacacattgcata |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
42622562 |
tcctcaactactagcattgaatatcaacacattgcata |
42622525 |
T |
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