View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10957_high_68 (Length: 244)
Name: NF10957_high_68
Description: NF10957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10957_high_68 |
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Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 12682984 - 12683208
Alignment:
| Q |
1 |
caaaatccaactgtaacagtgcaacaacaaacatcagtcattcctcaggcttcaccattgccacaacatcagcagcagcaacagcaggttcaggtacaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12682984 |
caaaatccaactgtaacagtgcaacaacaaacatcagtcattcctcaggcttcaccgttgccacaacatcagcagcagcaacagcaggttcaggtacaac |
12683083 |
T |
|
| Q |
101 |
agcagcaagtgacgaatatggaagttgcgaaaagtgataacaatggtgagagtatgatgcatgcaagttcttctaggtggccaaaaactgaggttgaggc |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12683084 |
agcagcaagtgatgaatatggaagttgcgaaaagtgataacaatggtgagagtatgatgcatgcaagttcttctaggtggccaaaaactgaggttgaggc |
12683183 |
T |
|
| Q |
201 |
attgataaagctaagaacaactctt |
225 |
Q |
| |
|
|||||||||||| |||||||||||| |
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|
| T |
12683184 |
attgataaagctgagaacaactctt |
12683208 |
T |
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