View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10957_low_64 (Length: 250)
Name: NF10957_low_64
Description: NF10957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10957_low_64 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 14486846 - 14486609
Alignment:
| Q |
1 |
cccatttttccttatattgcttgcatctaaaggccacatagtaagagatcaaaggattaaataacaattaactatatccaggaaaaattcttccaggtta |
100 |
Q |
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| T |
14486846 |
cccatttttctttatattgcttgcatctaaaggccacatagtaagagatcaaagaattaaataacaattaattatatccaggaaaaattcttccaggtta |
14486747 |
T |
|
| Q |
101 |
ttcgtgaacaagctgttcaagcaattccactgttcagtacataatataatcatataaaa---tacaaaacatggaaaagtgttattaccattaaattaaa |
197 |
Q |
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| T |
14486746 |
ttcgtgaacaagctgttcaagcaattccactgttcagtacataatatagtcatatcaaatagtacaaaacatggaaaagtgttattaccattaaattaaa |
14486647 |
T |
|
| Q |
198 |
tacctatgacctacaataatttaaacttgactccatat |
235 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
14486646 |
tacctatgacctacaataatttaaacttgactccatat |
14486609 |
T |
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