View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10957_low_85 (Length: 226)

Name: NF10957_low_85
Description: NF10957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10957_low_85
NF10957_low_85
[»] chr1 (42 HSPs)
chr1 (21-97)||(18438427-18438503)
chr1 (21-97)||(18449285-18449361)
chr1 (21-97)||(18454378-18454454)
chr1 (113-208)||(5845503-5845599)
chr1 (99-209)||(11828201-11828310)
chr1 (102-208)||(41459215-41459322)
chr1 (102-208)||(13147457-13147565)
chr1 (115-208)||(23603455-23603549)
chr1 (99-208)||(26606760-26606870)
chr1 (150-208)||(36183858-36183916)
chr1 (99-168)||(3941151-3941221)
chr1 (99-140)||(45943727-45943768)
chr1 (116-208)||(50269122-50269215)
chr1 (151-208)||(50513930-50513987)
chr1 (118-201)||(23604252-23604336)
chr1 (176-208)||(38878535-38878567)
chr1 (99-138)||(13633902-13633941)
chr1 (99-210)||(16270026-16270137)
chr1 (101-136)||(23276111-23276146)
chr1 (102-168)||(41804037-41804104)
chr1 (101-136)||(42572762-42572797)
chr1 (103-168)||(1167564-1167630)
chr1 (90-136)||(3944009-3944055)
chr1 (90-136)||(3993835-3993881)
chr1 (99-149)||(6562868-6562918)
chr1 (99-136)||(3728770-3728807)
chr1 (99-136)||(8548670-8548707)
chr1 (99-136)||(13636123-13636160)
chr1 (99-136)||(15051349-15051386)
chr1 (99-136)||(22524161-22524198)
chr1 (99-136)||(23359350-23359387)
chr1 (99-136)||(24364726-24364763)
chr1 (99-136)||(26633562-26633599)
chr1 (99-136)||(29424415-29424452)
chr1 (99-136)||(29425337-29425374)
chr1 (99-136)||(29438021-29438058)
chr1 (99-136)||(36072404-36072441)
chr1 (99-136)||(44336284-44336321)
chr1 (99-136)||(46217319-46217356)
chr1 (99-136)||(52802165-52802202)
chr1 (176-208)||(5844638-5844670)
chr1 (100-136)||(26879297-26879333)
[»] chr8 (22 HSPs)
chr8 (99-209)||(40039685-40039796)
chr8 (99-209)||(40039087-40039198)
chr8 (150-208)||(5680469-5680527)
chr8 (99-140)||(26451511-26451552)
chr8 (99-136)||(32383206-32383243)
chr8 (99-136)||(32437161-32437198)
chr8 (163-208)||(33482725-33482770)
chr8 (176-208)||(27411633-27411665)
chr8 (99-142)||(40077251-40077294)
chr8 (90-136)||(8419439-8419485)
chr8 (99-168)||(21406269-21406339)
chr8 (99-168)||(21800761-21800831)
chr8 (90-136)||(32375686-32375732)
chr8 (99-141)||(41016444-41016486)
chr8 (99-136)||(184553-184590)
chr8 (99-136)||(22550866-22550903)
chr8 (99-136)||(26663034-26663071)
chr8 (99-136)||(34366946-34366983)
chr8 (99-136)||(42602495-42602532)
chr8 (178-206)||(21175745-21175773)
chr8 (100-136)||(36677931-36677967)
chr8 (99-131)||(38134405-38134437)
[»] chr7 (19 HSPs)
chr7 (99-208)||(20353931-20354040)
chr7 (90-136)||(30791000-30791046)
chr7 (99-132)||(17838689-17838722)
chr7 (144-209)||(20353330-20353395)
chr7 (99-140)||(47060957-47060998)
chr7 (103-147)||(31324811-31324855)
chr7 (99-142)||(17840891-17840934)
chr7 (113-207)||(36805500-36805595)
chr7 (99-142)||(42499438-42499481)
chr7 (90-136)||(45767853-45767899)
chr7 (102-147)||(8522140-8522185)
chr7 (99-136)||(9367725-9367762)
chr7 (99-136)||(15070390-15070427)
chr7 (99-136)||(18105408-18105445)
chr7 (99-136)||(30355240-30355277)
chr7 (99-136)||(35606824-35606861)
chr7 (176-208)||(7953836-7953868)
chr7 (99-147)||(36781450-36781498)
chr7 (99-139)||(41047809-41047849)
[»] chr5 (22 HSPs)
chr5 (99-205)||(27532618-27532725)
chr5 (117-208)||(30966053-30966144)
chr5 (47-96)||(31609846-31609895)
chr5 (99-140)||(18307285-18307326)
chr5 (99-136)||(38968130-38968167)
chr5 (100-136)||(35926397-35926433)
chr5 (99-146)||(3603149-3603196)
chr5 (99-142)||(25890023-25890066)
chr5 (103-153)||(42099087-42099137)
chr5 (99-136)||(1035219-1035256)
chr5 (99-136)||(7757360-7757397)
chr5 (99-136)||(13837759-13837796)
chr5 (99-136)||(13838425-13838462)
chr5 (101-142)||(17966889-17966930)
chr5 (99-136)||(19037471-19037508)
chr5 (99-136)||(28238174-28238211)
chr5 (99-136)||(28388520-28388557)
chr5 (99-136)||(30708874-30708911)
chr5 (99-135)||(27659976-27660012)
chr5 (98-138)||(30705167-30705207)
chr5 (100-136)||(38855713-38855749)
chr5 (113-168)||(42098305-42098361)
[»] chr4 (37 HSPs)
chr4 (99-209)||(26791609-26791721)
chr4 (117-208)||(40335155-40335247)
chr4 (99-208)||(41933623-41933733)
chr4 (114-205)||(48578172-48578264)
chr4 (118-208)||(35075927-35076018)
chr4 (114-210)||(14297106-14297202)
chr4 (114-210)||(14315355-14315451)
chr4 (99-201)||(11084008-11084111)
chr4 (122-210)||(72529-72618)
chr4 (99-136)||(16984162-16984199)
chr4 (176-209)||(31242830-31242863)
chr4 (101-136)||(9013874-9013909)
chr4 (99-158)||(11494556-11494615)
chr4 (99-138)||(26932617-26932656)
chr4 (150-208)||(36003608-36003666)
chr4 (101-135)||(49422171-49422205)
chr4 (99-136)||(958595-958632)
chr4 (99-136)||(6178111-6178148)
chr4 (99-136)||(9890029-9890066)
chr4 (99-136)||(15995757-15995794)
chr4 (99-136)||(19069222-19069259)
chr4 (99-136)||(21022889-21022926)
chr4 (99-148)||(21470926-21470975)
chr4 (99-136)||(30726742-30726779)
chr4 (99-136)||(31425319-31425356)
chr4 (99-148)||(33383828-33383877)
chr4 (99-136)||(37022062-37022099)
chr4 (99-136)||(37563281-37563318)
chr4 (99-136)||(39590569-39590606)
chr4 (99-136)||(39773439-39773476)
chr4 (99-136)||(40358281-40358318)
chr4 (99-136)||(41795357-41795394)
chr4 (99-136)||(44561331-44561368)
chr4 (99-136)||(49094119-49094156)
chr4 (99-136)||(54634016-54634053)
chr4 (145-208)||(30836652-30836716)
chr4 (99-131)||(31242786-31242818)
[»] chr6 (18 HSPs)
chr6 (103-208)||(31496196-31496302)
chr6 (103-208)||(31501582-31501688)
chr6 (103-203)||(32555593-32555693)
chr6 (103-165)||(3380775-3380838)
chr6 (151-205)||(32555064-32555118)
chr6 (102-208)||(33052499-33052605)
chr6 (101-136)||(28362734-28362769)
chr6 (103-204)||(31480328-31480430)
chr6 (150-208)||(31516943-31517001)
chr6 (99-136)||(6204862-6204899)
chr6 (99-136)||(9048110-9048147)
chr6 (99-136)||(9049085-9049122)
chr6 (99-136)||(11691829-11691866)
chr6 (99-136)||(13382664-13382701)
chr6 (99-136)||(18351644-18351681)
chr6 (99-136)||(22305143-22305180)
chr6 (99-136)||(26712083-26712120)
chr6 (99-136)||(28249920-28249957)
[»] chr3 (44 HSPs)
chr3 (103-208)||(45507402-45507508)
chr3 (150-208)||(45506605-45506663)
chr3 (99-208)||(2830990-2831100)
chr3 (99-201)||(31890243-31890345)
chr3 (98-140)||(42760209-42760251)
chr3 (101-169)||(30256006-30256075)
chr3 (99-148)||(52570567-52570616)
chr3 (103-206)||(51325944-51326048)
chr3 (99-134)||(29929463-29929498)
chr3 (99-134)||(29978617-29978652)
chr3 (99-138)||(48566375-48566414)
chr3 (103-137)||(16861190-16861224)
chr3 (90-136)||(30943224-30943270)
chr3 (33-75)||(38992365-38992407)
chr3 (102-136)||(49196453-49196487)
chr3 (99-208)||(50604421-50604531)
chr3 (99-136)||(2647700-2647737)
chr3 (99-136)||(9429850-9429887)
chr3 (99-136)||(19341079-19341116)
chr3 (99-136)||(19440291-19440328)
chr3 (99-136)||(20918012-20918049)
chr3 (99-136)||(20926974-20927011)
chr3 (99-136)||(29918342-29918379)
chr3 (99-136)||(29967495-29967532)
chr3 (99-136)||(32593113-32593150)
chr3 (99-136)||(34049115-34049152)
chr3 (99-136)||(35743583-35743620)
chr3 (99-136)||(36812872-36812909)
chr3 (99-136)||(41579725-41579762)
chr3 (99-136)||(41803033-41803070)
chr3 (99-136)||(41844365-41844402)
chr3 (99-136)||(42756194-42756231)
chr3 (99-136)||(43476227-43476264)
chr3 (99-136)||(44227147-44227184)
chr3 (99-136)||(46697746-46697783)
chr3 (101-138)||(48566401-48566438)
chr3 (99-136)||(50477215-50477252)
chr3 (179-208)||(51326726-51326755)
chr3 (99-136)||(54389830-54389867)
chr3 (99-147)||(1294078-1294126)
chr3 (100-136)||(3501897-3501933)
chr3 (101-137)||(16861162-16861198)
chr3 (176-204)||(40872040-40872068)
chr3 (99-139)||(51402399-51402439)
[»] chr2 (26 HSPs)
chr2 (115-209)||(40055338-40055433)
chr2 (18-68)||(31320110-31320160)
chr2 (150-208)||(37893423-37893481)
chr2 (99-136)||(41183225-41183262)
chr2 (90-138)||(5351724-5351772)
chr2 (118-205)||(19848140-19848228)
chr2 (103-208)||(25515813-25515920)
chr2 (97-136)||(2983435-2983474)
chr2 (150-208)||(37893148-37893206)
chr2 (99-132)||(435381-435414)
chr2 (179-208)||(7780416-7780445)
chr2 (99-136)||(12908430-12908467)
chr2 (99-136)||(17424167-17424204)
chr2 (99-136)||(22003402-22003439)
chr2 (99-136)||(23347329-23347366)
chr2 (99-148)||(24601662-24601711)
chr2 (99-148)||(24612403-24612452)
chr2 (99-136)||(25184831-25184868)
chr2 (99-136)||(26543990-26544027)
chr2 (99-136)||(28468676-28468713)
chr2 (99-136)||(40221131-40221168)
chr2 (99-136)||(41565353-41565390)
chr2 (99-136)||(43536137-43536174)
chr2 (99-136)||(43982234-43982271)
chr2 (101-208)||(17911135-17911243)
chr2 (100-136)||(28477069-28477105)
[»] scaffold0794 (1 HSPs)
scaffold0794 (99-136)||(5306-5343)
[»] scaffold0494 (3 HSPs)
scaffold0494 (99-140)||(862-903)
scaffold0494 (99-138)||(890-929)
scaffold0494 (99-136)||(5366-5403)
[»] scaffold0143 (1 HSPs)
scaffold0143 (163-208)||(3906-3951)
[»] scaffold0050 (1 HSPs)
scaffold0050 (28-75)||(67649-67696)
[»] scaffold0341 (1 HSPs)
scaffold0341 (99-149)||(18058-18108)
[»] scaffold0744 (1 HSPs)
scaffold0744 (99-136)||(424-461)
[»] scaffold0634 (1 HSPs)
scaffold0634 (99-136)||(7453-7490)
[»] scaffold0038 (1 HSPs)
scaffold0038 (99-136)||(50082-50119)


Alignment Details
Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 18438503 - 18438427
Alignment:
Q  21 atgagcttcagagtcagtttcagggcccaatgtgctatcagtagcatcagtgtccatctcatctccccaaaatttgc 97  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  18438503 atgagcttcagagtcagtttcagggtccaatgtgccatcagaagcatcagtgtccatctcatctccccaaaatttgc 18438427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 18449361 - 18449285
Alignment:
Q  21 atgagcttcagagtcagtttcagggcccaatgtgctatcagtagcatcagtgtccatctcatctccccaaaatttgc 97  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  18449361 atgagcttcagagtcagtttcagggtccaatgtgccatcagaagcatcagtgtccatctcatctccccaaaatttgc 18449285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 18454454 - 18454378
Alignment:
Q  21 atgagcttcagagtcagtttcagggcccaatgtgctatcagtagcatcagtgtccatctcatctccccaaaatttgc 97  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  18454454 atgagcttcagagtcagtttcagggtccaatgtgccatcagaagcatcagtgtccatctcatctccccaaaatttgc 18454378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 5845503 - 5845599
Alignment:
Q  113 cgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||||||||||||||| ||| | ||||| |||| |||||||| ||||||||| |  |||||||||||||||||||||||||||| ||||    
T  5845503 cgaggttttcctcggtagttaactgcagccggttttatttttcctcggcagttaactatcgagaggtattttcgtcttttacatgtgtttcttagcc 5845599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 11828201 - 11828310
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtg 198  Q
    ||||||||||||  ||| ||||| ||||||||||||||||| || ||| | |||| ||||||| ||||||||| || |||||||| |||||||| |||||    
T  11828201 cggcagttaactgccgaagtttttctcggtagttaactaca-tcggttctatttttctcggcagttaactatcgaagggtatttttgtcttttatatgtg 11828299  T
Q  199 tttctcagcct 209  Q
    ||| |||||||    
T  11828300 tttttcagcct 11828310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 41459215 - 41459322
Alignment:
Q  102 cagttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtt 200  Q
    |||||||||  |||||||||||||||||||||||| |||   ||||| |||| |||||||| |||||| || |  |||||||| || |||||||||||||    
T  41459215 cagttaactgccgaggttttcctcggtagttaactgcagctggttttatttttcctcggcagttaactgtcgaggggtattttggtattttacatgtgtt 41459314  T
Q  201 tctcagcc 208  Q
    ||||||||    
T  41459315 tctcagcc 41459322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 13147565 - 13147457
Alignment:
Q  102 cagttaactatcgaggttttcctcggtagttaactacagtcagt--tttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgt 199  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||  | | |||||||| ||| ||||||| | | || ||||| |||||||||| |||||    
T  13147565 cagttaactgtcgaggttttcctcggtagttaactgcagtcggttctattttttcctcagcagttaactaccgagtgatatttccgtcttttacttgtgt 13147466  T
Q  200 ttctcagcc 208  Q
    || ||||||    
T  13147465 ttttcagcc 13147457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 23603549 - 23603455
Alignment:
Q  115 aggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||| ||||||||| ||||| ||||| |||| || ||||| |||||||   |  ||||||||||||||||| |||||||||||||||    
T  23603549 aggttttcctcgatagttaactgcagtctgttttatttttccccggcagttaactactgaggggtattttcgtcttttatatgtgtttctcagcc 23603455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 26606870 - 26606760
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgt-tttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 197  Q
    ||||||||||||  ||| ||||||||||||||||||||  ||||||||| || ||||||||||| |||| || | |  |||||||| || ||||||  ||    
T  26606870 cggcagttaactgccgaagttttcctcggtagttaactgtagtcagtttcgtatttcctcggcagttaattaccgaggggtattttggtattttactcgt 26606771  T
Q  198 gtttctcagcc 208  Q
    |||||||||||    
T  26606770 gtttctcagcc 26606760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 36183916 - 36183858
Alignment:
Q  150 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||| ||||||||| | || ||||||||||| |||||||||||||||||||||    
T  36183916 ttttcctcggtacttaactaccgaaaggtattttcgttttttacatgtgtttctcagcc 36183858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 3941151 - 3941221
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt-tgttttcctcggcacttaact 168  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| |||||| ||  |||||||||| ||||||    
T  3941151 cggcagttaactaccgaagttttcctcggtagttaactgcagccagtttatgaattcctcggcagttaact 3941221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 45943727 - 45943768
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacag 140  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  45943727 cggcagttaactaccgaagttttcctcggtagttaactacag 45943768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 50269122 - 50269215
Alignment:
Q  116 ggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||| ||||| |||||||| ||||| ||||| |||| ||||| |||||||||| | |  ||||||||| ||||||||  |||||||||||||    
T  50269122 ggtttttctcggcagttaactgcagtcggttttctttttcctcgacacttaactaccgaggggtattttcatcttttactcgtgtttctcagcc 50269215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 50513987 - 50513930
Alignment:
Q  151 tttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||| || ||||||| | |||||||||||||||||||| |||||||| ||||||    
T  50513987 tttcctcgccagttaactaccgaatggtattttcgtcttttatatgtgtttgtcagcc 50513930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 23604252 - 23604336
Alignment:
Q  118 ttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 201  Q
    ||||||||||||||||||| ||  | ||||| |||| |||||||| ||||||||  |   |||||||||||||||||||||||||    
T  23604252 ttttcctcggtagttaactgcaaccggttttatttttcctcggcagttaactattgaggagtattttcgtcttttacatgtgttt 23604336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 38878567 - 38878535
Alignment:
Q  176 ggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||||||||||||||||||||||||    
T  38878567 ggtattttcgtcttttacatgtgtttctcagcc 38878535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 13633941 - 13633902
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactac 138  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  13633941 cggcagttaactaccgaggttttcctcggcagttaactac 13633902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 16270026 - 16270137
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtg 198  Q
    ||||||||||||  |||||||||| |||| |||||||| ||| |  || | |||||||||| | ||||| ||| || |||||||| || |||||| | ||    
T  16270026 cggcagttaactgccgaggttttcttcggcagttaactgcagccgtttctattttcctcggtagttaaccatcgaagggtattttggtattttacttatg 16270125  T
Q  199 tttctcagccta 210  Q
    ||| ||||||||    
T  16270126 tttttcagccta 16270137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 23276111 - 23276146
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||||||||||||||| ||||||||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaact 23276146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 41804037 - 41804104
Alignment:
Q  102 cagttaactatcgaggttttcctcggtagttaactacagtcag-ttttgttttcctcggcacttaact 168  Q
    |||||||||| ||||||||||||||| |||||||| ||||| | |||||  |||||||||| ||||||    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaact 41804104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 42572797 - 42572762
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||| |||||||||||||||||||||||||    
T  42572797 gcagttaactgtcgaggttttcctcggtagttaact 42572762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 1167630 - 1167564
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaact 168  Q
    ||||||||  |||||||||||||| ||||||||| ||||| |||||  |||||||||||| ||||||    
T  1167630 agttaactgccgaggttttcctcgatagttaactgcagtcggttttacttttcctcggcagttaact 1167564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 3944055 - 3944009
Alignment:
Q  90 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  3944055 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 3944009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 3993835 - 3993881
Alignment:
Q  90 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  3993835 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 3993881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 6562868 - 6562918
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttg 149  Q
    |||||||||||| ||||||||||| ||||||||||||| ||| | ||||||    
T  6562868 cggcagttaactgtcgaggttttcttcggtagttaactgcagccggttttg 6562918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 3728807 - 3728770
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  3728807 cggcagttaactaccgaggttttcctcggcagttaact 3728770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 8548670 - 8548707
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  8548670 cggcagttaactaccgaggttttcctcggcagttaact 8548707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 13636123 - 13636160
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  13636123 cggcagttaactaccgaggttttcctcggcagttaact 13636160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 15051349 - 15051386
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  15051349 cggcagttaactaccgaggttttcctcggcagttaact 15051386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 22524198 - 22524161
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22524198 cggcagttaactaccgaggttttcctcgggagttaact 22524161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 23359350 - 23359387
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  23359350 cggcagtttactaccgaggttttcctcggtagttaact 23359387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 24364726 - 24364763
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  24364726 cggcagttaactgtcgaggttttcctcagtagttaact 24364763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 26633599 - 26633562
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  26633599 cggcagttaactaccgaggttttcctcggcagttaact 26633562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 29424452 - 29424415
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  29424452 cggcagttaactaccgaagttttcctcggtagttaact 29424415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 29425337 - 29425374
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  29425337 cggcagttaactaccgaagttttcctcggtagttaact 29425374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 29438021 - 29438058
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||| || ||||||||||||||||||||||||    
T  29438021 cggcagttaattaccgaggttttcctcggtagttaact 29438058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 36072441 - 36072404
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  36072441 cggcagttaactaccgaggttttcctcggcagttaact 36072404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 44336321 - 44336284
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  44336321 cggcagttaactaccgaggttttcctcggcagttaact 44336284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 46217319 - 46217356
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  46217319 cggcagttaactaccgaagttttcctcggtagttaact 46217356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 52802202 - 52802165
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  52802202 cggcagttaactaccgaggttttcctcggcagttaact 52802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 5844670 - 5844638
Alignment:
Q  176 ggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||| ||||||||||||||||||||||    
T  5844670 ggtattttcgacttttacatgtgtttctcagcc 5844638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 26879297 - 26879333
Alignment:
Q  100 ggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  26879297 ggcagttaactaccgaggttttcctcggcagttaact 26879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 40039685 - 40039796
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtc-agttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 197  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||| |  ||||||| || ||||||||| || |||||||| |||||||||||||    
T  40039685 cggcagttaactatcgaggttttcctcggtagttaactgcagtcgattttggacttcctcgacagttaactatcgaagggtatttttgtcttttacatgt 40039784  T
Q  198 gtttctcagcct 209  Q
    |||| |||||||    
T  40039785 gtttatcagcct 40039796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 40039198 - 40039087
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacag-tcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 197  Q
    ||||||||||||  |||||||||||||||||||||||| ||| | | ||| |  |||||||| | ||||||||  |  ||||||||||||||||||||||    
T  40039198 cggcagttaacttccgaggttttcctcggtagttaactgcagctgattttggacttcctcggtaattaactattgaggggtattttcgtcttttacatgt 40039099  T
Q  198 gtttctcagcct 209  Q
    |||| |||||||    
T  40039098 gtttttcagcct 40039087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 5680469 - 5680527
Alignment:
Q  150 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    ||||||||| |||||||||||| || |||||||| ||||||||||||||||||||||||    
T  5680469 ttttcctcgacacttaactatcgaagggtatttttgtcttttacatgtgtttctcagcc 5680527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 26451552 - 26451511
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacag 140  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  26451552 cggcagttaactaccgaggttttcctcggcagttaactacag 26451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 32383206 - 32383243
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32383206 cggcagttaactaccgaggttttcctcggtagttaact 32383243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 32437161 - 32437198
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32437161 cggcagttaactaccgaggttttcctcggtagttaact 32437198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 33482770 - 33482725
Alignment:
Q  163 ttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    ||||||| | || |||||||||||||||||||||||||||||||||    
T  33482770 ttaactaccgaaaggtattttcgtcttttacatgtgtttctcagcc 33482725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 27411665 - 27411633
Alignment:
Q  176 ggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||||||||||||||||||||||||    
T  27411665 ggtattttcgtcttttacatgtgtttctcagcc 27411633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 40077251 - 40077294
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtc 142  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||    
T  40077251 cggcagttaactaccgaggttttcctcggcagttaactgcagtc 40077294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 8419485 - 8419439
Alignment:
Q  90 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  8419485 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 8419439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 21406339 - 21406269
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt-tgttttcctcggcacttaact 168  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| | |||| ||  |||||||||| ||||||    
T  21406339 cggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaact 21406269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 21800831 - 21800761
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt-tgttttcctcggcacttaact 168  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| | |||| ||  |||||||||| ||||||    
T  21800831 cggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaact 21800761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 32375732 - 32375686
Alignment:
Q  90 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  32375732 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 32375686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 41016486 - 41016444
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagt 141  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||    
T  41016486 cggcagttaactaccgaggttttcctcggcagttaactgcagt 41016444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 184553 - 184590
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  184553 cggcagttaactaccgaggttttcctcggcagttaact 184590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 22550866 - 22550903
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22550866 cggcagttaactaccgaggttttcctcggcagttaact 22550903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 26663034 - 26663071
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  26663034 cggcagttaactaccgaggttttcctcggcagttaact 26663071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 34366983 - 34366946
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  34366983 cggcagttaactaccgaggttttcctcggaagttaact 34366946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 42602532 - 42602495
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  42602532 cggcagttaactaccgaggttttcctcggcagttaact 42602495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 21175773 - 21175745
Alignment:
Q  178 tattttcgtcttttacatgtgtttctcag 206  Q
    |||||||||||||||||||||||||||||    
T  21175773 tattttcgtcttttacatgtgtttctcag 21175745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 36677931 - 36677967
Alignment:
Q  100 ggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  36677931 ggcagttaactaccgaggttttcctcggcagttaact 36677967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 38134437 - 38134405
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagt 131  Q
    ||||||||||||||||| |||||||||||||||    
T  38134437 cggcagttaactatcgaagttttcctcggtagt 38134405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 20353931 - 20354040
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtg 198  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||   ||||||||||||| |||||||||||   || | |||||||||||||||||||||    
T  20353931 cggcagttaactactgaggttttcctcgatagttaactgcagttgattttgttttcctcagcacttaactacggaaggatattttcgtcttttacatgtg 20354030  T
Q  199 tttctcagcc 208  Q
    ||||||||||    
T  20354031 tttctcagcc 20354040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 30791000 - 30791046
Alignment:
Q  90 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  30791000 aaatttcctcggcagttaactaccgaggttttcctcggtagttaact 30791046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 17838722 - 17838689
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagtt 132  Q
    ||||||||||||||||||||||||||||||||||    
T  17838722 cggcagttaactatcgaggttttcctcggtagtt 17838689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 20353395 - 20353330
Alignment:
Q  144 gttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcct 209  Q
    |||||||||| |||||||||||| ||   ||  |||||||||||||||||| ||||||||||||||    
T  20353395 gttttgtttttctcggcacttaattactgaagagtattttcgtcttttacaagtgtttctcagcct 20353330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 47060998 - 47060957
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacag 140  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  47060998 cggcagttaactaccgaggttttcctcggcagttaactacag 47060957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 31324811 - 31324855
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagttt 147  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||    
T  31324811 agttaactgccgaggttttcctcggtagttaactacagtcggttt 31324855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 17840891 - 17840934
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtc 142  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||    
T  17840891 cggcagttaactaccgaggttttcctcggcagttaactgcagtc 17840934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 36805595 - 36805500
Alignment:
Q  113 cgaggttttcctcggtagttaactacagtcagttttgttttc-ctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagc 207  Q
    |||| ||||||||||||| ||||| ||  | ||||| ||||  |||| || |||||||||||  | |||||||||||||||||| |||||||||||    
T  36805595 cgagattttcctcggtagctaactgcaagcggttttattttttctcgacagttaactatcaagggatattttcgtcttttacatatgtttctcagc 36805500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 42499481 - 42499438
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtc 142  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||    
T  42499481 cggcagttaactaccgaggttttcctcggcagttaactgcagtc 42499438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 45767853 - 45767899
Alignment:
Q  90 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  45767853 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 45767899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 8522140 - 8522185
Alignment:
Q  102 cagttaactatcgaggttttcctcggtagttaactacagtcagttt 147  Q
    |||||||||  ||||||||||||||| |||||||||||| ||||||    
T  8522140 cagttaactgccgaggttttcctcgggagttaactacagccagttt 8522185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 9367725 - 9367762
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  9367725 cggcagttaactaccgaggttttcctcggcagttaact 9367762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 15070427 - 15070390
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  15070427 cggcagttaactaccgaggttttcctcggcagttaact 15070390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 18105445 - 18105408
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  18105445 cggcagttaactaccgaggttttcctcggcagttaact 18105408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 30355240 - 30355277
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  30355240 cggcagttaactaccgaggttttcctcggcagttaact 30355277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 35606861 - 35606824
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  35606861 cggcagttaactaccgaggttttcctcggcagttaact 35606824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 7953836 - 7953868
Alignment:
Q  176 ggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||||||||||||||||| ||||||    
T  7953836 ggtattttcgtcttttacatgtgtttatcagcc 7953868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 36781450 - 36781498
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt 147  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||| ||||    
T  36781450 cggcagttaactgccgaggttttcctcgggagttaactgcagtctgttt 36781498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 41047849 - 41047809
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactaca 139  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  41047849 cggcagttaactaccgaagttttcctcggcagttaactaca 41047809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 27532618 - 27532725
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 197  Q
    ||||||||||||  |||||||||||||| ||||||||| |||||||||||  |||||||||||| |||||| || |  |||||||| || ||||||||||    
T  27532618 cggcagttaactgccgaggttttcctcgatagttaactgcagtcagttttatttttcctcggcagttaactgtcgaggggtattttggtattttacatgt 27532717  T
Q  198 gtttctca 205  Q
    ||||||||    
T  27532718 gtttctca 27532725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 30966144 - 30966053
Alignment:
Q  117 gttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatc-aaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    ||||||||||| |||||||||||| | ||| | |||||||||||| ||||||| | ||| |||||||| ||||||||| ||||||||||||||    
T  30966144 gttttcctcgggagttaactacagccggttatattttcctcggcagttaactaccgaaagggtattttggtcttttac-tgtgtttctcagcc 30966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 31609895 - 31609846
Alignment:
Q  47 ccaatgtgctatcagtagcatcagtgtccatctcatctccccaaaatttg 96  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||||    
T  31609895 ccaatgtgctatcagtagcatcagtgttcatctcatcttctcaaaatttg 31609846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 18307326 - 18307285
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacag 140  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  18307326 cggcagttaactaccgaggttttcctcggcagttaactacag 18307285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 38968167 - 38968130
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  38968167 cggcagttaactatcgaggttttcctcggcagttaact 38968130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 35926433 - 35926397
Alignment:
Q  100 ggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35926433 ggcagttaactaccgaggttttcctcggtagttaact 35926397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 3603149 - 3603196
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtt 146  Q
    ||||||||||||| ||||||||||||||| |||||||| ||| |||||    
T  3603149 cggcagttaactaccgaggttttcctcggaagttaactgcagccagtt 3603196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 25890066 - 25890023
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtc 142  Q
    |||||||| |||| |||||||||||||||||||||||| |||||    
T  25890066 cggcagtttactaccgaggttttcctcggtagttaactgcagtc 25890023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 42099087 - 42099137
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt 153  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  42099087 agttaactgccgaggttttcctcgatagttaactacagccagttttatttt 42099137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 1035256 - 1035219
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  1035256 cggcagttaactatcgaggatttcctcggtaattaact 1035219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 7757397 - 7757360
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  7757397 cggcagttaactagcgaggttttcctcggcagttaact 7757360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 13837796 - 13837759
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  13837796 cggcagttaactaccgaggttttcctcggcagttaact 13837759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 13838425 - 13838462
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  13838425 cggcagttaactgccgaggttttcctcggtagttaact 13838462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 17966889 - 17966930
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaactacagtc 142  Q
    ||||||||||| |||| ||||||||||||||||||| |||||    
T  17966889 gcagttaactaccgagattttcctcggtagttaactgcagtc 17966930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 19037471 - 19037508
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  19037471 cggcagttaactaccgaggttttcctcggcagttaact 19037508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 28238211 - 28238174
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28238211 cggcagttaactaccgaggttttcctcggcagttaact 28238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 28388520 - 28388557
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28388520 cggcagttaactaccgaggttttcctcggcagttaact 28388557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 30708874 - 30708911
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  30708874 cggcagttaactatcgaggttttcttcggcagttaact 30708911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 27660012 - 27659976
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaac 135  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  27660012 cggcagttaactaccgaggttttcctcggcagttaac 27659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 30705167 - 30705207
Alignment:
Q  98 gcggcagttaactatcgaggttttcctcggtagttaactac 138  Q
    |||||||||||||| ||||| ||||||||| ||||||||||    
T  30705167 gcggcagttaactaccgaggatttcctcggcagttaactac 30705207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 38855713 - 38855749
Alignment:
Q  100 ggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  38855713 ggcagttaactaccgaggttttcctcggcagttaact 38855749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 42098361 - 42098305
Alignment:
Q  113 cgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaact 168  Q
    ||||||||||||||| |||||||| ||| |||||||  |||||||||||| ||||||    
T  42098361 cgaggttttcctcggcagttaactgcagccagttttatttttcctcggcagttaact 42098305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 26791721 - 26791609
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttg--ttttcctcggcacttaactatcaaatggtattttcgtcttttacatg 196  Q
    ||||||||||||  ||||||||| |||||||||||||| ||| | ||||    ||||| |||||| ||||||| | || |||||||||||||||||||||    
T  26791721 cggcagttaactgccgaggtttttctcggtagttaactgcagccggtttccctttttcttcggcagttaactaccgaagggtattttcgtcttttacatg 26791622  T
Q  197 tgtttctcagcct 209  Q
    |||||||||||||    
T  26791621 tgtttctcagcct 26791609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 40335155 - 40335247
Alignment:
Q  117 gttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    ||||||||||| |||||||||||| | ||||| |||| |||| ||| ||||||||  || |||||||||||||||||||||||||||||||||    
T  40335155 gttttcctcggcagttaactacagccggttttatttttcctcagcagttaactattgaagggtattttcgtcttttacatgtgtttctcagcc 40335247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 41933623 - 41933733
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgt 197  Q
    ||||||||||||| ||||||||| |||||||||||||| ||| | ||||  |||| |||||||||||||||||| |  |||||| |||| ||||||  ||    
T  41933623 cggcagttaactaccgaggtttttctcggtagttaactgcagccggtttcatttttcctcggcacttaactatcgaggggtattgtcgttttttactcgt 41933722  T
Q  198 gtttctcagcc 208  Q
    |||||||||||    
T  41933723 gtttctcagcc 41933733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 48578172 - 48578264
Alignment:
Q  114 gaggttttcctcggtagttaactacagtcagttttgttttc-ctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctca 205  Q
    ||||||||| ||||||||||||| ||| | ||||| ||||  ||||||||||||||| | |  ||||||||||||||||||||||||||||||    
T  48578172 gaggttttcttcggtagttaactgcagccggttttattttttctcggcacttaactaccgagaggtattttcgtcttttacatgtgtttctca 48578264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 35076018 - 35075927
Alignment:
Q  118 ttttcctcggtagttaactacagtcagttttgttttcct-cggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    ||||||||||||||||||| |||   ||||| |||| || || |||||||||||| |  |||||||||||||||||||||||||||||||||    
T  35076018 ttttcctcggtagttaactgcagctggttttatttttcttcgacacttaactatcgaggggtattttcgtcttttacatgtgtttctcagcc 35075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 14297202 - 14297106
Alignment:
Q  114 gaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagccta 210  Q
    ||||||||||||||||||||||| ||| ||||||  |||| ||||||||||||||| | |   | |||| |||||||||| ||||||||| ||||||    
T  14297202 gaggttttcctcggtagttaactgcagccagtttcatttttctcggcacttaactaccgaggagcatttacgtcttttacttgtgtttctaagccta 14297106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 14315451 - 14315355
Alignment:
Q  114 gaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagccta 210  Q
    ||||||||||||||||||||||| ||| ||||||  |||| ||||||||||||||| | |   | |||| |||||||||| ||||||||| ||||||    
T  14315451 gaggttttcctcggtagttaactgcagccagtttcatttttctcggcacttaactaccgaggagcatttacgtcttttacttgtgtttctaagccta 14315355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 11084008 - 11084111
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagt-cagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 197  Q
    ||||||||||||  ||||||||||||||| |||||||| | ||  | |||  |||||||||||||||| ||| | |  ||||||||||||||||| ||||    
T  11084008 cggcagttaactgccgaggttttcctcgggagttaactgccgtggattttatttttcctcggcacttacctaccgaggggtattttcgtcttttaaatgt 11084107  T
Q  198 gttt 201  Q
    ||||    
T  11084108 gttt 11084111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 72529 - 72618
Alignment:
Q  122 cctcggtagttaactacagtcagttttgt-tttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagccta 210  Q
    ||||||||||||||| ||| | ||||  | ||||||||||| ||||||| | ||||||||||| || ||||||  |||||||||||||||    
T  72529 cctcggtagttaactgcagacggtttcatatttcctcggcagttaactaccgaatggtattttggtattttactcgtgtttctcagccta 72618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 16984162 - 16984199
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  16984162 cggcagttaactatcgaggttttcctcggcagttaact 16984199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 31242830 - 31242863
Alignment:
Q  176 ggtattttcgtcttttacatgtgtttctcagcct 209  Q
    ||||||||||||||||||||||||||||||||||    
T  31242830 ggtattttcgtcttttacatgtgtttctcagcct 31242863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 9013909 - 9013874
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9013909 gcagttaactatcgaggttttcctcggcagttaact 9013874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 11494615 - 11494556
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcg 158  Q
    ||||||||||||| ||||||||||||||| |||||||| ||| | ||||||  |||||||    
T  11494615 cggcagttaactaccgaggttttcctcggcagttaactgcagccggttttgaattcctcg 11494556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 26932656 - 26932617
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactac 138  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  26932656 cggcagttaactaccgaggttttcctcggcagttaactac 26932617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 36003666 - 36003608
Alignment:
Q  150 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||| |||| |||||||||||| |   ||||||||||||||||||||||||| ||||||    
T  36003666 tttttctcgacacttaactatcgaggagtattttcgtcttttacatgtgtttttcagcc 36003608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 49422171 - 49422205
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaac 135  Q
    |||||||||| ||||||||||||||||||||||||    
T  49422171 gcagttaactgtcgaggttttcctcggtagttaac 49422205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 958595 - 958632
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  958595 cggcagttaactaccgaggttttcctcggcagttaact 958632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 6178111 - 6178148
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  6178111 cggcagttaactaccgaggttttcctcggcagttaact 6178148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 9890066 - 9890029
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  9890066 cggcagttaactaccgaggttttcctcggcagttaact 9890029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 15995794 - 15995757
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  15995794 cggcagttaactaccgaggttttcctcggcagttaact 15995757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 19069259 - 19069222
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  19069259 cggcagttaactaccgaggttttcctcggcagttaact 19069222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 21022889 - 21022926
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  21022889 cggcagttaactaccgaggttttcctcggcagttaact 21022926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 21470975 - 21470926
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 148  Q
    ||||||||||||| ||||||||||||| |  ||||||| |||||||||||    
T  21470975 cggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttt 21470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 30726742 - 30726779
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  30726742 cggcagttaactaccgaggttttcctcggcagttaact 30726779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 31425319 - 31425356
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  31425319 cggcagttaactaccgaggttttcctcggcagttaact 31425356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 33383877 - 33383828
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 148  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||| |||||    
T  33383877 cggcagttaacttccgaggttttcctcggcagttaactgcagtcggtttt 33383828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 37022062 - 37022099
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  37022062 cggcagttaactgccgaggttttcctcggtagttaact 37022099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 37563281 - 37563318
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  37563281 cggcagttaactaccgaggttttcctcggcagttaact 37563318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 39590569 - 39590606
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  39590569 cggcagttaactaccgaggttttcctcggcagttaact 39590606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 39773476 - 39773439
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  39773476 cggcagttaactaccgaggttttcctcggcagttaact 39773439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 40358281 - 40358318
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  40358281 cggcagttaactaccgaggttttcctcggcagttaact 40358318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 41795357 - 41795394
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  41795357 cggcagttaactaacgaggttttcctcggcagttaact 41795394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 44561331 - 44561368
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  44561331 cggcagttaactaccgagattttcctcggtagttaact 44561368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 49094156 - 49094119
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  49094156 cggcagttaactaccgaggttttcctcggcagttaact 49094119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 54634016 - 54634053
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  54634016 cggcagttaactaccgaggttttcctcggcagttaact 54634053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 30836716 - 30836652
Alignment:
Q  145 ttttgttttcctcggcacttaactatc-aaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||| ||||| |||||| |||||| || |||||  ||||||||||||||||||||||| ||||||    
T  30836716 tttttttttcgtcggcagttaactgtcgaaatgacattttcgtcttttacatgtgtttttcagcc 30836652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 31242786 - 31242818
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagt 131  Q
    ||||||||||||| |||||||||||||||||||    
T  31242786 cggcagttaactaccgaggttttcctcggtagt 31242818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 31496302 - 31496196
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 201  Q
    ||||||||  |||||||||||||||||| ||||| ||| | ||||| |||| ||||| || ||||||| | || |||||||| |||||||||||||||||    
T  31496302 agttaactgccgaggttttcctcggtagataactgcagccggttttatttttcctcgacagttaactaccgaagggtatttttgtcttttacatgtgttt 31496203  T
Q  202 ctcagcc 208  Q
    |||||||    
T  31496202 ctcagcc 31496196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 31501688 - 31501582
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagttttg-ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 201  Q
    ||||||||  |||||||||||||||||| ||||| ||| | |||||  ||||||||| || ||||||| | || |||||||| |||||||||||||||||    
T  31501688 agttaactgccgaggttttcctcggtagataactgcagccggttttaattttcctcgacagttaactaccgaagggtatttttgtcttttacatgtgttt 31501589  T
Q  202 ctcagcc 208  Q
    |||||||    
T  31501588 ctcagcc 31501582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 32555593 - 32555693
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttc 202  Q
    ||||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||  |||||||||| | |    ||||||| ||||||||| |||||||    
T  32555593 agttaactaccgaggttttccttagtaattaactacagtcggttttgttttcctcaacacttaactaccgaggaatattttcttcttttacaagtgtttc 32555692  T
Q  203 t 203  Q
    |    
T  32555693 t 32555693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 3380838 - 3380775
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcactta 165  Q
    |||||||| ||||||||||||||||||||||||| | |||| ||||  ||||||||||||||||    
T  3380838 agttaactgtcgaggttttcctcggtagttaactgccgtcaattttatttttcctcggcactta 3380775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 32555118 - 32555064
Alignment:
Q  151 tttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctca 205  Q
    |||| |||||| ||||||| | |||| ||||||||||||||||||||||||||||    
T  32555118 tttcatcggcagttaactaccgaatgatattttcgtcttttacatgtgtttctca 32555064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 33052605 - 33052499
Alignment:
Q  102 cagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 201  Q
    ||||||||| ||||| |||| |||||||||||||| ||| | ||||| ||||||||| || ||||||  | |     |||||||| ||||||||||||||    
T  33052605 cagttaactgtcgagatttttctcggtagttaactgcagacggttttattttcctcgacagttaactgccgagaaacattttcgttttttacatgtgttt 33052506  T
Q  202 ctcagcc 208  Q
    |||||||    
T  33052505 ctcagcc 33052499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 28362734 - 28362769
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||||||||||||||| ||||||||    
T  28362734 gcagttaactatcgaggttttcctcggcagttaact 28362769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 204
Target Start/End: Complemental strand, 31480430 - 31480328
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 201  Q
    ||||||||  |||||||||||| ||||| ||||| |||   ||||| |||| ||||| || ||||||| | || |||||||| | |||||||||||||||    
T  31480430 agttaactcccgaggttttcctgggtagataactgcagctggttttatttttcctcgacagttaactaccgaagggtatttttgacttttacatgtgttt 31480331  T
Q  202 ctc 204  Q
    |||    
T  31480330 ctc 31480328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 31516943 - 31517001
Alignment:
Q  150 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||| ||||||| | |  ||||||||| |||||||||||||||||| ||||    
T  31516943 ttttcctcggcagttaactaccgaggggtattttcatcttttacatgtgtttcttagcc 31517001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 6204899 - 6204862
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  6204899 cggcagttaactaccgaggttttcctcggcagttaact 6204862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 9048147 - 9048110
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  9048147 cggcagttaactaccgaagttttcctcggtagttaact 9048110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 9049085 - 9049122
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  9049085 cggcagttaactaccgaagttttcctcggtagttaact 9049122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 11691866 - 11691829
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  11691866 cggcagttaactaccgaggttttcctcggcagttaact 11691829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 13382701 - 13382664
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  13382701 cggcagttaactaccgaggttttcctcggcagttaact 13382664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 18351644 - 18351681
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  18351644 cggcagttaactaccgaggttttcctcggcagttaact 18351681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 22305180 - 22305143
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22305180 cggcagttaactaccgaggttttcctcggcagttaact 22305143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 26712120 - 26712083
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  26712120 cggcagttaactaccgaggttttcctcggcagttaact 26712083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 28249957 - 28249920
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28249957 cggcagttaactaccgaggttttcctcggcagttaact 28249920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 45507402 - 45507508
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 201  Q
    ||||||||  |||||||||||||||||||||||| ||| |  |||| |||| |||||||| ||||||||| |  | ||||||||||||||| ||||||||    
T  45507402 agttaactgccgaggttttcctcggtagttaactgcagccgattttatttttcctcggcagttaactatcgagggatattttcgtcttttatatgtgttt 45507501  T
Q  202 ctcagcc 208  Q
    |||||||    
T  45507502 ctcagcc 45507508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 45506663 - 45506605
Alignment:
Q  150 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||    
T  45506663 ttttcctcggcagttaactatcaagaggtatttttgtcttttacatgtgtttctcagcc 45506605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 2830990 - 2831100
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 197  Q
    |||||||||||| |||||||||| ||| ||||||||||  |||| |||||  ||||| |||||| |||| |||  |  | |||||||||||||||||| |    
T  2830990 cggcagttaactgtcgaggtttttctcagtagttaactgtagtcggttttatttttcatcggcagttaattattgagggatattttcgtcttttacatat 2831089  T
Q  198 gtttctcagcc 208  Q
    |||||||||||    
T  2831090 gtttctcagcc 2831100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 31890243 - 31890345
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtg 198  Q
    ||||||||||||  ||| ||||||||| |||  ||||| ||| | ||| | ||||| |||||| ||||||| ||| || ||||||||||||||| |||||    
T  31890243 cggcagttaactgccgaagttttcctctgtaactaactgcagccggttcttttttcatcggcagttaactaccaagtgatattttcgtcttttatatgtg 31890342  T
Q  199 ttt 201  Q
    |||    
T  31890343 ttt 31890345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 42760209 - 42760251
Alignment:
Q  98 gcggcagttaactatcgaggttttcctcggtagttaactacag 140  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  42760209 gcggcagttaactaccgaggttttcctcggcagttaactacag 42760251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 30256006 - 30256075
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaactacagtcagttttgt-tttcctcggcacttaacta 169  Q
    ||||||||||||||||||||||||||| |||||||| ||| | ||||| |  |||||||||| |||||||    
T  30256006 gcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaacta 30256075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 52570567 - 52570616
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 148  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| |||||    
T  52570567 cggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttt 52570616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 51326048 - 51325944
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgttt 201  Q
    |||||||| |||||||||| || ||||||||||| ||| | |||||  ||||||||| || ||||||||  |  | ||||||| |||||||||||| |||    
T  51326048 agttaactgtcgaggtttttcttggtagttaactgcagccggttttatttttcctcgacagttaactattgagggatattttcatcttttacatgtcttt 51325949  T
Q  202 ctcag 206  Q
    |||||    
T  51325948 ctcag 51325944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 29929498 - 29929463
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaa 134  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29929498 cggcagttaactatcgaggttttcctcggcagttaa 29929463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 29978652 - 29978617
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaa 134  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29978652 cggcagttaactatcgaggttttcctcggcagttaa 29978617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 48566414 - 48566375
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactac 138  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  48566414 cggcagttaactaccgaagttttcctcggtagttaactac 48566375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 16861190 - 16861224
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaacta 137  Q
    ||||||||||||||| |||||||||||||||||||    
T  16861190 agttaactatcgaggatttcctcggtagttaacta 16861224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 30943270 - 30943224
Alignment:
Q  90 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  30943270 aaatttcctcggcagttaactaccgaggttttcctcggcagttaact 30943224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 38992407 - 38992365
Alignment:
Q  33 gtcagtttcagggcccaatgtgctatcagtagcatcagtgtcc 75  Q
    |||||| |||||  |||||||||||||||||||||||||||||    
T  38992407 gtcagtatcaggttccaatgtgctatcagtagcatcagtgtcc 38992365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 49196453 - 49196487
Alignment:
Q  102 cagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| |||||||||||||||||||||    
T  49196453 cagttaactatcgcggttttcctcggtagttaact 49196487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 50604421 - 50604531
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacag-tcagttttgttttcctcggcacttaactatcaaatggtattttcgtcttttacatgt 197  Q
    ||||||||||||  |||||||||||||||||||||||| ||| | | ||| |  |||||| ||| ||||||    || |||||||| || ||||||||||    
T  50604421 cggcagttaactgccgaggttttcctcggtagttaactgcagctgattttggacttcctcagcaattaactgctgaagggtattttagtattttacatgt 50604520  T
Q  198 gtttctcagcc 208  Q
    |||| ||||||    
T  50604521 gtttttcagcc 50604531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 2647700 - 2647737
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  2647700 cggcagttaactaccgaggttttcctcggcagttaact 2647737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 9429850 - 9429887
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  9429850 cggcagttaactaccgaggttttcctcggtacttaact 9429887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 19341116 - 19341079
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  19341116 cggcagttaactgtcgaagttttcctcggtagttaact 19341079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 19440328 - 19440291
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  19440328 cggcagttaactaccgaggttttcctcggcagttaact 19440291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 20918012 - 20918049
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  20918012 cggcagttaactaccgaggttttcctcggcagttaact 20918049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 20926974 - 20927011
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  20926974 cggcagttaactaccgaggttttcctcggcagttaact 20927011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 29918342 - 29918379
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  29918342 cggcagttaactaacgaggttttcctcggcagttaact 29918379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 29967495 - 29967532
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  29967495 cggcagttaactaacgaggttttcctcggcagttaact 29967532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 32593113 - 32593150
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  32593113 cggcagttaactatcgaagttttcctcggaagttaact 32593150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 34049152 - 34049115
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  34049152 cggcagttaactaccgaggttttcctcggcagttaact 34049115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 35743583 - 35743620
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  35743583 cggcagttaactaccgaggttttcctcggcagttaact 35743620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 36812909 - 36812872
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  36812909 cggcagtttactaccgaggttttcctcggtagttaact 36812872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 41579725 - 41579762
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  41579725 cggcagttaactaccgaggttttcctcggcagttaact 41579762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 41803070 - 41803033
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  41803070 cggcagttaactaccgaggttttcctcggcagttaact 41803033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 41844365 - 41844402
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  41844365 cggcagttaactaccgaggttttcctcggcagttaact 41844402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 42756231 - 42756194
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  42756231 cggcagttaactctcgaggttttcctcggcagttaact 42756194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 43476264 - 43476227
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  43476264 cggcagttaactaccgaggttttcctcggcagttaact 43476227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 44227184 - 44227147
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  44227184 cggcagttaactaccgaggttttcctcggcagttaact 44227147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 46697783 - 46697746
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  46697783 cggcagttaactaccgaggttttcctcggcagttaact 46697746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 48566438 - 48566401
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaactac 138  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  48566438 gcagttaactaccgaggttttcctcggcagttaactac 48566401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 50477252 - 50477215
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  50477252 cggcagttaactaccgaggttttcctcggcagttaact 50477215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 51326726 - 51326755
Alignment:
Q  179 attttcgtcttttacatgtgtttctcagcc 208  Q
    ||||||||||||||||||||||||||||||    
T  51326726 attttcgtcttttacatgtgtttctcagcc 51326755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 54389867 - 54389830
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  54389867 cggcagttaactaccgaggttttcctcggcagttaact 54389830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 1294078 - 1294126
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttt 147  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||| ||||    
T  1294078 cggcagttaactgccgaggttttcctcggaagttaactgcagtcggttt 1294126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 3501897 - 3501933
Alignment:
Q  100 ggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  3501897 ggcagttaactaccgaggttttcctcggcagttaact 3501933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 16861162 - 16861198
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaacta 137  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  16861162 gcagttaactaccgaggatttcctcggtagttaacta 16861198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 40872068 - 40872040
Alignment:
Q  176 ggtattttcgtcttttacatgtgtttctc 204  Q
    |||||||||||||||||||||||||||||    
T  40872068 ggtattttcgtcttttacatgtgtttctc 40872040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 51402399 - 51402439
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactaca 139  Q
    ||||||||||||| ||||||||||||||  |||||||||||    
T  51402399 cggcagttaactaccgaggttttcctcgacagttaactaca 51402439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 40055433 - 40055338
Alignment:
Q  115 aggttttcctcggtagttaactacagtcagtttt-gttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcct 209  Q
    |||||||||||||||||||||| ||| | ||||| ||||||||||  | |||||| || |  |||| ||||||||||||||||||||| |||||||    
T  40055433 aggttttcctcggtagttaactgcagccggttttagttttcctcgatagttaactgtcgaggggtaatttcgtcttttacatgtgtttatcagcct 40055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 31320160 - 31320110
Alignment:
Q  18 gttatgagcttcagagtcagtttcagggcccaatgtgctatcagtagcatc 68  Q
    ||||||||||||  |||||||||||||| ||||| ||||||||||||||||    
T  31320160 gttatgagcttcgaagtcagtttcagggtccaatatgctatcagtagcatc 31320110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 37893423 - 37893481
Alignment:
Q  150 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||| ||||||| | | |||||||||| |||||||||||||||||| ||||    
T  37893423 ttttcctcggcagttaactaccgagtggtattttcatcttttacatgtgtttcttagcc 37893481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 41183225 - 41183262
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  41183225 cggcagttaactaccgaggttttcctcggtagttaact 41183262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 5351724 - 5351772
Alignment:
Q  90 aaatttgcgcggcagttaactatcgaggttttcctcggtagttaactac 138  Q
    |||||| | ||||||||||||| ||||||||||||||| ||||||||||    
T  5351724 aaatttcctcggcagttaactaccgaggttttcctcggcagttaactac 5351772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 19848140 - 19848228
Alignment:
Q  118 ttttcctcggtagttaactacagtcagttttgtttt-cctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctca 205  Q
    |||| |||||||||||||| ||  | ||||| |||| |||||||| ||||||||| ||   |||||| |||||||||||||||||||||    
T  19848140 tttttctcggtagttaactgcaaccggttttatttttcctcggcagttaactatcgaagaatatttttgtcttttacatgtgtttctca 19848228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 25515813 - 25515920
Alignment:
Q  103 agttaactatcgaggttttcctcggtagttaactacagtcagttttg--ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtt 200  Q
    ||||||||| ||| || ||||||||||||||||| ||||| ||| ||  ||||||| | |||||||||| | |  |||||| |||||||||||   ||||    
T  25515813 agttaactaccgaagtcttcctcggtagttaactgcagtcggttctgttttttccttgtcacttaactaccgaggggtattgtcgtcttttactcatgtt 25515912  T
Q  201 tctcagcc 208  Q
    ||||||||    
T  25515913 tctcagcc 25515920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 2983474 - 2983435
Alignment:
Q  97 cgcggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  2983474 cgcggcagttaactgccgaggttttcctcggtagttaact 2983435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 37893206 - 37893148
Alignment:
Q  150 ttttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    |||||||||||| ||||||| | |  |||||||||||| ||||||||||||||| ||||    
T  37893206 ttttcctcggcagttaactaccgaggggtattttcgtcatttacatgtgtttcttagcc 37893148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 435414 - 435381
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagtt 132  Q
    ||||||| ||||||||||||||||||||||||||    
T  435414 cggcagtcaactatcgaggttttcctcggtagtt 435381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 7780416 - 7780445
Alignment:
Q  179 attttcgtcttttacatgtgtttctcagcc 208  Q
    ||||||||||||||||||||||||||||||    
T  7780416 attttcgtcttttacatgtgtttctcagcc 7780445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 12908430 - 12908467
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  12908430 cggcagttaactatcaaggttttcctcggcagttaact 12908467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 17424204 - 17424167
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  17424204 cggcagttaactaccgaggttttcctcggcagttaact 17424167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 22003402 - 22003439
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22003402 cggcagttaactaccgaggttttcctcggcagttaact 22003439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 23347329 - 23347366
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  23347329 cggcagttagctaccgaggttttcctcggtagttaact 23347366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 24601711 - 24601662
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 148  Q
    ||||||||||||| ||| | |||||||||||||||||| ||| |||||||    
T  24601711 cggcagttaactaccgaagatttcctcggtagttaactgcagccagtttt 24601662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 24612403 - 24612452
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagtttt 148  Q
    ||||||||||||| ||| | |||||||||||||||||| ||| |||||||    
T  24612403 cggcagttaactaccgaagatttcctcggtagttaactgcagccagtttt 24612452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 25184831 - 25184868
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  25184831 cggcagttaactaccgaggttttcctcggcagttaact 25184868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 26543990 - 26544027
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  26543990 cggcagttaactaccgaggttttcctcagtagttaact 26544027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 28468713 - 28468676
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28468713 cggcagttaactaccgaggttttcctcggcagttaact 28468676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 40221131 - 40221168
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  40221131 cggcagttaactgccgaggttttcctcggtagttaact 40221168  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 41565390 - 41565353
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  41565390 cggcagttaactgccgaggttttcctcggtagttaact 41565353  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 43536174 - 43536137
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  43536174 cggcagttaactaccgaggttttcctcggcagttaact 43536137  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 43982271 - 43982234
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  43982271 cggcagttaactaccgaggttttcctcggcagttaact 43982234  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 208
Target Start/End: Complemental strand, 17911243 - 17911135
Alignment:
Q  101 gcagttaactatcgaggttttcctcggtagttaactacagtcagttttgtt-ttcctcggcacttaactatcaaatggtattttcgtcttttacatgtgt 199  Q
    ||||||||||   |||||||||||||||| |||||| ||| | ||||||   |||||||||| |||||| || || |  ||||| || ||||||||||||    
T  17911243 gcagttaactgctgaggttttcctcggtaattaactgcagccggttttggacttcctcggcagttaactgtcgaaggacattttagtattttacatgtgt 17911144  T
Q  200 ttctcagcc 208  Q
    || ||||||    
T  17911143 ttttcagcc 17911135  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 28477069 - 28477105
Alignment:
Q  100 ggcagttaactatcgaggttttcctcggtagttaact 136  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  28477069 ggcagttaactaccgaggttttcctcggcagttaact 28477105  T

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Target: scaffold0794 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 5343 - 5306
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5343 cggcagttaactaccgaggttttcctcggtagttaact 5306  T

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Target: scaffold0494 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 903 - 862
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacag 140  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  903 cggcagttaactaccgaggttttcctcggcagttaactacag 862  T

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Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 929 - 890
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactac 138  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  929 cggcagttaactaccgaggttttcctcggcagttaactac 890  T

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Target: scaffold0494; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 5403 - 5366
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  5403 cggcagttaactaccgaggttttcctcggcagttaact 5366  T

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Target: scaffold0143 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 3906 - 3951
Alignment:
Q  163 ttaactatcaaatggtattttcgtcttttacatgtgtttctcagcc 208  Q
    ||||||| | || |||||||||||||||||||||||||||||||||    
T  3906 ttaactaccgaaaggtattttcgtcttttacatgtgtttctcagcc 3951  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 67696 - 67649
Alignment:
Q  28 tcagagtcagtttcagggcccaatgtgctatcagtagcatcagtgtcc 75  Q
    |||||||| ||||||||  ||| |||||||||||||||||||||||||    
T  67696 tcagagtcggtttcaggatccactgtgctatcagtagcatcagtgtcc 67649  T

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Target: scaffold0341 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 18058 - 18108
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaactacagtcagttttg 149  Q
    |||||||||||| ||||||||||| ||||||||||||| ||| | ||||||    
T  18058 cggcagttaactgtcgaggttttcttcggtagttaactgcagccggttttg 18108  T

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Target: scaffold0744 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 424 - 461
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  424 cggcagttaactaccgaggttttcctcggcagttaact 461  T

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Target: scaffold0634 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 7490 - 7453
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  7490 cggcagttaactaccgaggttttcctcggtagtcaact 7453  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 50119 - 50082
Alignment:
Q  99 cggcagttaactatcgaggttttcctcggtagttaact 136  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  50119 cggcagttaactaccgaggttttcctcggcagttaact 50082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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