View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10957_low_92 (Length: 206)
Name: NF10957_low_92
Description: NF10957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10957_low_92 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 45217441 - 45217618
Alignment:
| Q |
16 |
atgaatggtaaaaacacttagagtttgagggacaaatcaagcttctgcaactcctcttgtttattcttcaaacttgtaacattataacctccaaatacat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
45217441 |
atgaatggtaaaaacacttagagtttgagggacaagtcaagcttctgcaactcctcttgtttattcttcaaacttgtaacattataacctccaaatccat |
45217540 |
T |
|
| Q |
116 |
tttgcacctttcttggagaaaatttccctgatcttgtaggtatggcactagtcaaggatgatgatccatcagtttctg |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45217541 |
tttgcacctttcttggagaaaatttccctgatcttgtaggtatggcactagtcaaggatgatgatccatcagtttctg |
45217618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University