View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10958_high_4 (Length: 355)

Name: NF10958_high_4
Description: NF10958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10958_high_4
NF10958_high_4
[»] chr2 (27 HSPs)
chr2 (18-305)||(5693947-5694231)
chr2 (18-228)||(5684071-5684281)
chr2 (317-351)||(34123245-34123279)
chr2 (317-354)||(35180561-35180598)
chr2 (317-355)||(7464214-7464253)
chr2 (317-355)||(9715124-9715163)
chr2 (317-355)||(11367075-11367114)
chr2 (317-355)||(19256864-19256903)
chr2 (317-355)||(23000784-23000823)
chr2 (317-355)||(25429921-25429960)
chr2 (317-355)||(25430045-25430084)
chr2 (317-355)||(25887893-25887932)
chr2 (317-355)||(26717157-26717196)
chr2 (317-355)||(26717416-26717455)
chr2 (317-355)||(39245940-39245979)
chr2 (317-355)||(45127111-45127150)
chr2 (317-354)||(1375046-1375084)
chr2 (317-354)||(1466810-1466848)
chr2 (317-354)||(17798848-17798886)
chr2 (317-354)||(21843455-21843493)
chr2 (317-354)||(34850932-34850970)
chr2 (317-354)||(36987412-36987450)
chr2 (317-354)||(36987688-36987726)
chr2 (317-355)||(37334604-37334642)
chr2 (317-353)||(34981386-34981422)
chr2 (296-324)||(37343978-37344006)
chr2 (320-355)||(40445572-40445608)
[»] chr3 (52 HSPs)
chr3 (303-355)||(14904441-14904494)
chr3 (304-351)||(39708013-39708061)
chr3 (306-355)||(39589008-39589058)
chr3 (308-355)||(26600531-26600579)
chr3 (317-355)||(257711-257750)
chr3 (317-355)||(2239505-2239544)
chr3 (317-355)||(7858237-7858276)
chr3 (317-355)||(8313948-8313987)
chr3 (317-355)||(10864114-10864153)
chr3 (317-355)||(12881234-12881273)
chr3 (317-355)||(12881490-12881529)
chr3 (317-355)||(17916358-17916397)
chr3 (317-355)||(19391637-19391676)
chr3 (317-355)||(19391978-19392017)
chr3 (317-355)||(19914747-19914786)
chr3 (317-355)||(20982534-20982573)
chr3 (317-355)||(21841726-21841765)
chr3 (317-355)||(26494684-26494723)
chr3 (317-355)||(27748243-27748282)
chr3 (317-355)||(27748518-27748557)
chr3 (317-355)||(27766517-27766556)
chr3 (317-355)||(27766792-27766831)
chr3 (317-355)||(28964152-28964191)
chr3 (317-355)||(28964429-28964468)
chr3 (317-355)||(32204847-32204886)
chr3 (317-355)||(37182003-37182042)
chr3 (317-355)||(41281844-41281883)
chr3 (317-355)||(42230032-42230071)
chr3 (317-355)||(42230306-42230345)
chr3 (317-355)||(42465690-42465729)
chr3 (317-355)||(44177287-44177326)
chr3 (317-355)||(44183971-44184010)
chr3 (317-355)||(44895923-44895962)
chr3 (317-355)||(45743898-45743937)
chr3 (317-355)||(47423403-47423442)
chr3 (317-355)||(47530615-47530654)
chr3 (317-355)||(52916858-52916897)
chr3 (317-355)||(53192113-53192152)
chr3 (317-355)||(53532081-53532120)
chr3 (317-354)||(3212427-3212465)
chr3 (317-354)||(5577208-5577246)
chr3 (317-354)||(10864394-10864432)
chr3 (317-354)||(22202484-22202522)
chr3 (317-354)||(25053859-25053897)
chr3 (317-354)||(27857410-27857448)
chr3 (317-355)||(31869195-31869233)
chr3 (317-354)||(32508194-32508232)
chr3 (317-354)||(44184246-44184284)
chr3 (317-354)||(47530339-47530377)
chr3 (317-354)||(53192388-53192426)
chr3 (317-353)||(31869470-31869507)
chr3 (317-352)||(51843077-51843113)
[»] chr5 (41 HSPs)
chr5 (304-355)||(15221476-15221528)
chr5 (317-351)||(7623525-7623559)
chr5 (305-352)||(33749249-33749297)
chr5 (317-355)||(2710339-2710378)
chr5 (317-355)||(3223559-3223598)
chr5 (317-355)||(4125443-4125482)
chr5 (317-355)||(4125719-4125758)
chr5 (317-355)||(5088073-5088112)
chr5 (317-355)||(5088347-5088386)
chr5 (317-355)||(9071967-9072006)
chr5 (317-355)||(9072224-9072263)
chr5 (317-355)||(11480035-11480074)
chr5 (317-355)||(12049118-12049157)
chr5 (317-355)||(15526703-15526742)
chr5 (317-355)||(16079453-16079492)
chr5 (317-355)||(16521153-16521192)
chr5 (317-355)||(16666848-16666887)
chr5 (317-355)||(27264108-27264147)
chr5 (317-355)||(28394932-28394971)
chr5 (317-355)||(28620038-28620077)
chr5 (317-355)||(29401364-29401403)
chr5 (317-355)||(30894124-30894163)
chr5 (317-355)||(32556020-32556059)
chr5 (317-355)||(35306709-35306748)
chr5 (317-355)||(40297664-40297703)
chr5 (317-355)||(40768163-40768202)
chr5 (317-355)||(41032461-41032500)
chr5 (317-355)||(43586061-43586100)
chr5 (317-354)||(223169-223207)
chr5 (317-354)||(8986610-8986648)
chr5 (317-354)||(21583598-21583636)
chr5 (317-354)||(23502403-23502441)
chr5 (317-353)||(2546372-2546409)
chr5 (317-353)||(31172839-31172876)
chr5 (317-353)||(41880312-41880349)
chr5 (317-354)||(13356824-13356863)
chr5 (320-355)||(18266351-18266387)
chr5 (317-352)||(20974462-20974498)
chr5 (317-352)||(28251400-28251436)
chr5 (317-352)||(28395208-28395244)
chr5 (317-354)||(35055776-35055815)
[»] chr1 (52 HSPs)
chr1 (303-354)||(866405-866457)
chr1 (306-354)||(33777166-33777215)
chr1 (317-354)||(40814887-40814924)
chr1 (317-354)||(43677377-43677414)
chr1 (318-354)||(25098154-25098190)
chr1 (317-355)||(922438-922477)
chr1 (317-355)||(7598608-7598647)
chr1 (317-355)||(8774297-8774336)
chr1 (317-355)||(10279952-10279991)
chr1 (317-355)||(11018400-11018439)
chr1 (317-355)||(11051895-11051934)
chr1 (317-355)||(11204506-11204545)
chr1 (317-355)||(12690020-12690059)
chr1 (317-355)||(15161296-15161335)
chr1 (317-355)||(15161573-15161612)
chr1 (317-355)||(20017652-20017691)
chr1 (317-355)||(20596138-20596177)
chr1 (317-355)||(23342236-23342275)
chr1 (317-355)||(23356692-23356731)
chr1 (317-355)||(26861273-26861312)
chr1 (317-355)||(27396801-27396840)
chr1 (317-355)||(29794692-29794731)
chr1 (317-355)||(43677102-43677141)
chr1 (317-355)||(43914577-43914616)
chr1 (317-355)||(45012631-45012670)
chr1 (317-355)||(45664415-45664454)
chr1 (317-355)||(45885224-45885263)
chr1 (317-355)||(46320951-46320990)
chr1 (317-355)||(52233430-52233469)
chr1 (317-354)||(3264000-3264038)
chr1 (317-354)||(6182982-6183020)
chr1 (317-354)||(8774572-8774610)
chr1 (317-354)||(9058166-9058204)
chr1 (317-354)||(11052172-11052210)
chr1 (317-354)||(18589849-18589887)
chr1 (317-354)||(22204581-22204619)
chr1 (317-354)||(23793057-23793095)
chr1 (317-354)||(26434965-26435003)
chr1 (317-354)||(32341495-32341533)
chr1 (317-354)||(37029203-37029241)
chr1 (317-354)||(42407160-42407198)
chr1 (317-355)||(52201365-52201403)
chr1 (317-354)||(6912217-6912254)
chr1 (317-353)||(8029232-8029269)
chr1 (319-355)||(20288024-20288061)
chr1 (317-353)||(25098405-25098442)
chr1 (319-355)||(31797063-31797100)
chr1 (317-355)||(49056397-49056437)
chr1 (317-352)||(14460303-14460339)
chr1 (317-352)||(30289422-30289458)
chr1 (317-352)||(47113390-47113426)
chr1 (317-354)||(49056123-49056162)
[»] chr8 (42 HSPs)
chr8 (304-354)||(7318897-7318948)
chr8 (317-354)||(35735504-35735541)
chr8 (306-351)||(45022595-45022641)
chr8 (319-355)||(45326152-45326188)
chr8 (317-355)||(1657660-1657699)
chr8 (317-355)||(4132753-4132792)
chr8 (317-355)||(6107116-6107155)
chr8 (317-355)||(8870258-8870297)
chr8 (317-355)||(14032035-14032074)
chr8 (317-355)||(20095685-20095724)
chr8 (317-355)||(30359117-30359156)
chr8 (317-355)||(30845835-30845874)
chr8 (317-355)||(32332139-32332178)
chr8 (317-355)||(36226690-36226729)
chr8 (317-355)||(37205816-37205855)
chr8 (317-355)||(38593186-38593225)
chr8 (317-355)||(39616826-39616865)
chr8 (317-355)||(42267733-42267772)
chr8 (317-355)||(42906371-42906410)
chr8 (317-355)||(42906649-42906688)
chr8 (317-354)||(414667-414705)
chr8 (317-354)||(2321792-2321830)
chr8 (304-334)||(3411689-3411719)
chr8 (317-354)||(5734460-5734498)
chr8 (317-354)||(7151117-7151155)
chr8 (317-354)||(20095962-20096000)
chr8 (317-354)||(20283950-20283988)
chr8 (317-354)||(21070578-21070616)
chr8 (317-354)||(39515558-39515596)
chr8 (317-354)||(40918649-40918687)
chr8 (317-353)||(6107392-6107429)
chr8 (319-355)||(27822874-27822911)
chr8 (318-354)||(39626244-39626281)
chr8 (318-354)||(39635794-39635831)
chr8 (317-352)||(20791018-20791054)
chr8 (319-354)||(20814018-20814054)
chr8 (317-352)||(36788256-36788292)
chr8 (317-352)||(38166486-38166522)
chr8 (317-352)||(38166761-38166797)
chr8 (317-352)||(41206164-41206200)
chr8 (317-352)||(42363580-42363616)
chr8 (320-355)||(42642366-42642402)
[»] chr6 (29 HSPs)
chr6 (309-355)||(9126642-9126689)
chr6 (317-355)||(1896897-1896936)
chr6 (317-355)||(2100379-2100418)
chr6 (317-355)||(4405516-4405555)
chr6 (317-355)||(6261652-6261691)
chr6 (317-355)||(7391484-7391523)
chr6 (317-355)||(7391752-7391791)
chr6 (317-355)||(10893888-10893927)
chr6 (317-355)||(11213458-11213497)
chr6 (317-355)||(11745997-11746036)
chr6 (317-355)||(13042407-13042446)
chr6 (317-355)||(15272997-15273036)
chr6 (317-355)||(20080117-20080156)
chr6 (317-355)||(23291255-23291294)
chr6 (317-355)||(23585253-23585292)
chr6 (317-355)||(26716646-26716685)
chr6 (317-355)||(27223584-27223623)
chr6 (317-355)||(29697118-29697157)
chr6 (317-355)||(30965967-30966006)
chr6 (317-355)||(31951476-31951515)
chr6 (317-354)||(6261381-6261419)
chr6 (317-354)||(10894145-10894183)
chr6 (317-354)||(13042683-13042721)
chr6 (317-354)||(25749955-25749993)
chr6 (319-352)||(1358535-1358568)
chr6 (317-353)||(22279500-22279537)
chr6 (319-355)||(26171484-26171521)
chr6 (319-355)||(31833543-31833580)
chr6 (317-352)||(31741046-31741082)
[»] chr4 (47 HSPs)
chr4 (317-355)||(26675331-26675369)
chr4 (317-355)||(104199-104238)
chr4 (317-355)||(4902135-4902174)
chr4 (317-355)||(4902431-4902470)
chr4 (317-355)||(5344546-5344585)
chr4 (317-355)||(6386730-6386769)
chr4 (317-355)||(7396140-7396179)
chr4 (317-355)||(7666199-7666238)
chr4 (317-355)||(7705589-7705628)
chr4 (317-355)||(7705864-7705903)
chr4 (317-355)||(11529758-11529797)
chr4 (317-355)||(12641094-12641133)
chr4 (317-355)||(13021254-13021293)
chr4 (317-355)||(14578437-14578476)
chr4 (317-355)||(23315653-23315692)
chr4 (317-355)||(24415072-24415111)
chr4 (317-355)||(24415349-24415388)
chr4 (317-355)||(27246858-27246897)
chr4 (317-355)||(29548179-29548218)
chr4 (317-355)||(29548455-29548494)
chr4 (317-355)||(35364470-35364509)
chr4 (317-355)||(37289454-37289493)
chr4 (317-355)||(39136572-39136611)
chr4 (317-355)||(41205497-41205536)
chr4 (317-355)||(41205771-41205810)
chr4 (317-355)||(42672343-42672382)
chr4 (317-355)||(43821973-43822012)
chr4 (306-355)||(44822438-44822489)
chr4 (317-355)||(51537429-51537468)
chr4 (317-355)||(51696535-51696574)
chr4 (317-355)||(52045720-52045759)
chr4 (317-355)||(52045991-52046030)
chr4 (317-355)||(52114409-52114448)
chr4 (317-355)||(52310800-52310839)
chr4 (317-355)||(52311077-52311116)
chr4 (317-354)||(7666473-7666511)
chr4 (317-354)||(11159695-11159733)
chr4 (317-354)||(17262360-17262398)
chr4 (317-354)||(21536880-21536918)
chr4 (317-354)||(27247134-27247172)
chr4 (317-355)||(34957377-34957415)
chr4 (317-354)||(39946352-39946390)
chr4 (317-354)||(43821719-43821757)
chr4 (317-354)||(48278191-48278229)
chr4 (315-355)||(19725658-19725699)
chr4 (317-353)||(31844062-31844099)
chr4 (317-352)||(56296619-56296655)
[»] scaffold1067 (1 HSPs)
scaffold1067 (317-351)||(1611-1645)
[»] scaffold0031 (1 HSPs)
scaffold0031 (317-355)||(3782-3820)
[»] chr7 (40 HSPs)
chr7 (317-355)||(40790946-40790984)
chr7 (317-355)||(3235391-3235430)
chr7 (317-355)||(5096787-5096826)
chr7 (317-355)||(7974666-7974705)
chr7 (317-355)||(10312502-10312541)
chr7 (317-355)||(11900049-11900088)
chr7 (317-355)||(11900325-11900364)
chr7 (317-355)||(16879513-16879552)
chr7 (317-355)||(18074090-18074129)
chr7 (317-355)||(18852768-18852807)
chr7 (317-355)||(19194159-19194198)
chr7 (317-355)||(19194436-19194475)
chr7 (317-355)||(19233339-19233378)
chr7 (317-355)||(21782602-21782641)
chr7 (317-355)||(25683950-25683989)
chr7 (317-355)||(25982988-25983027)
chr7 (317-355)||(27432489-27432528)
chr7 (317-355)||(30699022-30699061)
chr7 (317-355)||(34288047-34288086)
chr7 (317-355)||(34533213-34533252)
chr7 (317-355)||(35437489-35437528)
chr7 (317-355)||(35924166-35924205)
chr7 (317-355)||(36376059-36376098)
chr7 (317-355)||(38879425-38879464)
chr7 (317-355)||(39753871-39753910)
chr7 (317-355)||(42997055-42997094)
chr7 (317-355)||(44214658-44214697)
chr7 (317-355)||(46622553-46622592)
chr7 (317-354)||(10385724-10385762)
chr7 (317-355)||(17167854-17167892)
chr7 (317-354)||(19233594-19233632)
chr7 (317-354)||(39976729-39976767)
chr7 (317-355)||(45863246-45863284)
chr7 (317-354)||(17168152-17168189)
chr7 (319-355)||(38053145-38053182)
chr7 (319-355)||(43632340-43632377)
chr7 (317-353)||(44189406-44189443)
chr7 (317-352)||(20387555-20387591)
chr7 (317-352)||(20392029-20392065)
chr7 (317-352)||(35923894-35923930)
[»] scaffold1171 (1 HSPs)
scaffold1171 (317-355)||(818-857)
[»] scaffold0922 (1 HSPs)
scaffold0922 (317-355)||(108-147)
[»] scaffold0693 (1 HSPs)
scaffold0693 (317-355)||(4796-4835)
[»] scaffold0606 (1 HSPs)
scaffold0606 (317-355)||(6867-6906)
[»] scaffold0594 (2 HSPs)
scaffold0594 (317-355)||(5591-5630)
scaffold0594 (317-355)||(5868-5907)
[»] scaffold0474 (2 HSPs)
scaffold0474 (317-355)||(7720-7759)
scaffold0474 (317-353)||(7996-8033)
[»] scaffold0370 (2 HSPs)
scaffold0370 (317-355)||(10903-10942)
scaffold0370 (317-355)||(16193-16232)
[»] scaffold0352 (1 HSPs)
scaffold0352 (317-355)||(9946-9985)
[»] scaffold0122 (2 HSPs)
scaffold0122 (317-355)||(29649-29688)
scaffold0122 (317-355)||(29926-29965)
[»] scaffold0078 (1 HSPs)
scaffold0078 (317-355)||(20901-20940)
[»] scaffold0035 (1 HSPs)
scaffold0035 (317-355)||(81577-81616)
[»] scaffold0014 (1 HSPs)
scaffold0014 (317-355)||(78989-79028)
[»] scaffold0005 (1 HSPs)
scaffold0005 (317-355)||(238899-238938)
[»] scaffold0001 (2 HSPs)
scaffold0001 (317-355)||(400703-400742)
scaffold0001 (317-355)||(400981-401020)
[»] scaffold0328 (1 HSPs)
scaffold0328 (317-354)||(16029-16067)
[»] scaffold0213 (2 HSPs)
scaffold0213 (317-354)||(21322-21360)
scaffold0213 (319-354)||(21066-21102)
[»] scaffold0121 (2 HSPs)
scaffold0121 (317-354)||(22295-22333)
scaffold0121 (317-354)||(22551-22589)
[»] scaffold0182 (1 HSPs)
scaffold0182 (296-325)||(20585-20614)
[»] scaffold0864 (1 HSPs)
scaffold0864 (317-352)||(2646-2682)


Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 5693947 - 5694231
Alignment:
Q  18 tgaaatatgaagatgatgtgattgctaaaggtgcattacaagctgtaaggaaaaacattgtggttgtttgtagtgctggaaattttggtccttttccaca 117  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5693947 tgaaatatgaagatgatgtgattgctaagggtgcattacaagctgtaaggaaaaacattgtggttgtttgtagtgctggaaattttggtccttttccaca 5694046  T
Q  118 tagtttgtcaaatcctgccccttggatcatcactgttggtgctagtactgtcgatcgaacctttcttgctccaattaaacttaacaatggcagaaccatc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5694047 tagtttgtcaaatcctgccccttggatcatcactgttggtgctagtactgtcgatcgaacctttcttgctccaattaaacttaacaatggcagaaccatc 5694146  T
Q  218 gaggtaaatttcaagttcactagaaagaagaagaagaaaaagtaggatagatgtttaataaaagtactccttcccgtcttatatttaa 305  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5694147 gaggtaaatttcaagttcactaga---aagaagaagaaaaagtaggatagatgtttaataaaggtactccttcccgtcttatatttaa 5694231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 228
Target Start/End: Original strand, 5684071 - 5684281
Alignment:
Q  18 tgaaatatgaagatgatgtgattgctaaaggtgcattacaagctgtaaggaaaaacattgtggttgtttgtagtgctggaaattttggtccttttccaca 117  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||| |||| ||| ||    
T  5684071 tgaaatatgaggatgatgtgattgctaagggtgcattacaagctgtaaggaaaaacattgttgttgtttgtagtgctggaaatgctggcccttctcctca 5684170  T
Q  118 tagtttgtcaaatcctgccccttggatcatcactgttggtgctagtactgtcgatcgaacctttcttgctccaattaaacttaacaatggcagaaccatc 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | |||||||| ||| ||     
T  5684171 tagtttgtcaaatccttccccttggatcatcacggttggtgctagtactgtcgatcgaacctttcttgctccaattaagctgagcaatggcacaacgatt 5684270  T
Q  218 gaggtaaattt 228  Q
    |||||||||||    
T  5684271 gaggtaaattt 5684281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 351
Target Start/End: Complemental strand, 34123279 - 34123245
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaa 351  Q
    |||||||||||||||||||||||||||||||||||    
T  34123279 acttttggaaagatagggtccaaaagtgcaattaa 34123245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 35180561 - 35180598
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| |||||||||||||||||||    
T  35180561 acttttggaaagataggggccaaaagtgcaattaagcc 35180598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 7464214 - 7464253
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  7464214 acttttggaaagataggagtccaaaagtgcaattaagcct 7464253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 9715124 - 9715163
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  9715124 acttttggaaagataggggtccaaaagtgcaattaagcct 9715163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 11367075 - 11367114
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  11367075 acttttggaaagataagggtccaaaagtgcaattaagcct 11367114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 19256864 - 19256903
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19256864 acttttggaaagataggggtccaaaagtgcaattaagcct 19256903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 23000784 - 23000823
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23000784 acttttggaaagataggggtccaaaagtgcaattaagcct 23000823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 25429960 - 25429921
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25429960 acttttggaaagataggggtccaaaagtgcaattaagcct 25429921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 25430045 - 25430084
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25430045 acttttggaaagataggggtccaaaagtgcaattaagcct 25430084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 25887932 - 25887893
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  25887932 acttttggaaagataagggtccaaaagtgcaattaagcct 25887893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 26717196 - 26717157
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  26717196 acttttggaaagataggggtccaaaagtgcaattaagcct 26717157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 26717416 - 26717455
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  26717416 acttttggaaagatatgggtccaaaagtgcaattaagcct 26717455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 39245940 - 39245979
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  39245940 acttttggaaagatatgggtccaaaagtgcaattaagcct 39245979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 45127111 - 45127150
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45127111 acttttggaaagataggggtccaaaagtgcaattaagcct 45127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 1375084 - 1375046
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1375084 acttttggaaagataggggtccaaaagtgcaattaagcc 1375046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 1466848 - 1466810
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1466848 acttttggaaagataggggtccaaaagtgcaattaagcc 1466810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 17798886 - 17798848
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17798886 acttttggaaagataggggtccaaaagtgcaattaagcc 17798848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 21843455 - 21843493
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21843455 acttttggaaagataggagtccaaaagtgcaattaagcc 21843493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 34850932 - 34850970
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34850932 acttttggaaagataggggtccaaaagtgcaattaagcc 34850970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 36987450 - 36987412
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  36987450 acttttggaaagataggggtccaaaagtgcaattaagcc 36987412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 36987688 - 36987726
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  36987688 acttttggaaagataggggtccaaaagtgcaattaagcc 36987726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 37334642 - 37334604
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  37334642 acttttgaaaagataggggccaaaagtgcaattaagcct 37334604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 34981422 - 34981386
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagc 353  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  34981422 acttttgaaaagatagggtccaaaaatgcaattaagc 34981386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 324
Target Start/End: Complemental strand, 37344006 - 37343978
Alignment:
Q  296 ttatatttaaggcttaattgcacttttgg 324  Q
    |||||||||||||||||||||||||||||    
T  37344006 ttatatttaaggcttaattgcacttttgg 37343978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 355
Target Start/End: Complemental strand, 40445608 - 40445572
Alignment:
Q  320 tttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40445608 tttggaaagatatgggtccaaaagtgcaattaagcct 40445572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 14904494 - 14904441
Alignment:
Q  303 taaggcttaattgcacttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14904494 taaggcttaattgcacttttggaaagataggggtccaaaagtgcaattaagcct 14904441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 39708061 - 39708013
Alignment:
Q  304 aaggcttaattgcacttttggaaagata-gggtccaaaagtgcaattaa 351  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  39708061 aaggcttaattgcacttttggaaagataggggtcgaaaagtgcaattaa 39708013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 39589058 - 39589008
Alignment:
Q  306 ggcttaattgcacttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  39589058 ggcttaattgcacttttggaaagataggggtccaaaaatgcaatttagcct 39589008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 26600531 - 26600579
Alignment:
Q  308 cttaattgcacttttggaaagat-agggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  26600531 cttaattgcacttttggaaagataaggggccaaaagtacaattaagcct 26600579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 257711 - 257750
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  257711 acttttggaaagataggggtccaaaagtgcaattaagcct 257750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 2239505 - 2239544
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  2239505 acttttggaaagataggggtccaaaagtgcaattaagcct 2239544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 7858237 - 7858276
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7858237 acttttggaaagatagggatccaaaagtgcaattaagcct 7858276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 8313987 - 8313948
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  8313987 acttttggaaagataggggtccaaaagtgcaattaagcct 8313948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 10864153 - 10864114
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10864153 acttttggaaagataggggtccaaaagtgcaattaagcct 10864114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 12881273 - 12881234
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12881273 acttttggaaagataggggtccaaaagtgcaattaagcct 12881234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 12881490 - 12881529
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12881490 acttttggaaagataggggtccaaaagtgcaattaagcct 12881529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 17916358 - 17916397
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  17916358 acttttggaaagataggggtccaaaagtgcaattaagcct 17916397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 19391676 - 19391637
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19391676 acttttggaaagataggggtccaaaagtgcaattaagcct 19391637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 19391978 - 19392017
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19391978 acttttggaaagataggggtccaaaagtgcaattaagcct 19392017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 19914747 - 19914786
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19914747 acttttggaaagataggggtccaaaagtgcaattaagcct 19914786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 20982534 - 20982573
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20982534 acttttggaaagataggggtccaaaagtgcaattaagcct 20982573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 21841765 - 21841726
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21841765 acttttggaaagataggggtccaaaagtgcaattaagcct 21841726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 26494723 - 26494684
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  26494723 acttttggaaagataggggtccaaaagtgcaattaagcct 26494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 27748282 - 27748243
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27748282 acttttggaaagataggggtccaaaagtgcaattaagcct 27748243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 27748518 - 27748557
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27748518 acttttggaaagataggggtccaaaagtgcaattaagcct 27748557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 27766556 - 27766517
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27766556 acttttggaaagataggggtccaaaagtgcaattaagcct 27766517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 27766792 - 27766831
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27766792 acttttggaaagataggggtccaaaagtgcaattaagcct 27766831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 28964191 - 28964152
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28964191 acttttggaaagataggggtccaaaagtgcaattaagcct 28964152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 28964429 - 28964468
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28964429 acttttggaaagataggggtccaaaagtgcaattaagcct 28964468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 32204886 - 32204847
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  32204886 acttttggaaagatagaggtccaaaagtgcaattaagcct 32204847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 37182042 - 37182003
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  37182042 acttttggaaagataggggtccaaaagtgcaattaagcct 37182003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 41281883 - 41281844
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  41281883 acttttggaaagataggggtccaaaagtgcaattaagcct 41281844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 42230071 - 42230032
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  42230071 acttttggaaagatagaggtccaaaagtgcaattaagcct 42230032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 42230306 - 42230345
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  42230306 acttttggaaagataggggtccaaaagtgcaattaagcct 42230345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 42465729 - 42465690
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  42465729 acttttggaaagataggggtccaaaagtgcaattaagcct 42465690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 44177326 - 44177287
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  44177326 acttttggaaagataggggtccaaaagtgcaattaagcct 44177287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 44184010 - 44183971
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  44184010 acttttggaaagataggggtccaaaagtgcaattaagcct 44183971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 44895923 - 44895962
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  44895923 acttttggaaagataggggtccaaaagtgcaattaagcct 44895962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 45743937 - 45743898
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45743937 acttttggaaagataggggtccaaaagtgcaattaagcct 45743898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 47423403 - 47423442
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  47423403 acttttggaaagataggggtccaaaagtgcaattaagcct 47423442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 47530615 - 47530654
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  47530615 acttttggaaagataggggtccaaaagtgcaattaagcct 47530654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 52916897 - 52916858
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52916897 acttttggaaagataggggtccaaaagtgcaattaagcct 52916858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 53192152 - 53192113
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  53192152 acttttggaaagataggggtccaaaagtgcaattaagcct 53192113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 53532081 - 53532120
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  53532081 acttttggaaagataggggtccaaaagtgcaattaagcct 53532120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 3212427 - 3212465
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3212427 acttttggaaagataggggtccaaaagtgcaattaagcc 3212465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 5577208 - 5577246
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5577208 acttttggaaagataggggtccaaaagtgcaattaagcc 5577246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 10864394 - 10864432
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  10864394 acttttggaaagataggggtccaaaagtgcaattaagcc 10864432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 22202522 - 22202484
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  22202522 acttttggaaagataggggtccaaaagtgcaattaagcc 22202484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 25053859 - 25053897
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25053859 acttttggaaagataggggtccaaaagtgcaattaagcc 25053897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 27857410 - 27857448
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  27857410 acttttggaaagataggggtccaaaagtgcaattaagcc 27857448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 31869233 - 31869195
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  31869233 acttttagaaaaatagggtccaaaagtgcaattaagcct 31869195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 32508194 - 32508232
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  32508194 acttttggaaagatagaggtccaaaagtgcaattaagcc 32508232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 44184246 - 44184284
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  44184246 acttttggaaagataggggtccaaaagtgcaattaagcc 44184284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 47530377 - 47530339
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47530377 acttttggaaagataggggtccaaaagtgcaattaagcc 47530339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 53192388 - 53192426
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  53192388 acttttggaaagataggggtccaaaagtgcaattaagcc 53192426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 31869470 - 31869507
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  31869470 acttttggaaagataggggtccaaaagtgcaattaagc 31869507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 51843077 - 51843113
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  51843077 acttttggaaagataggggtccaaaagtgcaattaag 51843113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 304 - 355
Target Start/End: Original strand, 15221476 - 15221528
Alignment:
Q  304 aaggcttaattgcacttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15221476 aaggcttaattgcacttttggaaagatatgggtccaaaagtgcaattaagcct 15221528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 351
Target Start/End: Complemental strand, 7623559 - 7623525
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaa 351  Q
    |||||||||||||||||||||||||||||||||||    
T  7623559 acttttggaaagatagggtccaaaagtgcaattaa 7623525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 33749297 - 33749249
Alignment:
Q  305 aggcttaattgcacttttggaaagata-gggtccaaaagtgcaattaag 352  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  33749297 aggcttaattgcacttttgaaaagatagggggccaaaagtgcaattaag 33749249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 2710378 - 2710339
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  2710378 acttttggaaagataggggtccaaaagtgcaattaagcct 2710339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 3223559 - 3223598
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  3223559 acttttggaaagataggggtccaaaagtgcaattaagcct 3223598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 4125482 - 4125443
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4125482 acttttggaaagataggggtccaaaagtgcaattaagcct 4125443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 4125719 - 4125758
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  4125719 acttttggaaagataagggtccaaaagtgcaattaagcct 4125758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 5088112 - 5088073
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5088112 acttttggaaagataggggtccaaaagtgcaattaagcct 5088073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 5088347 - 5088386
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5088347 acttttggaaagataggggtccaaaagtgcaattaagcct 5088386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 9072006 - 9071967
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  9072006 acttttggaaagataggggtccaaaagtgcaattaagcct 9071967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 9072224 - 9072263
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  9072224 acttttggaaagataagggtccaaaagtgcaattaagcct 9072263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 11480074 - 11480035
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11480074 acttttggaaagataggggtccaaaagtgcaattaagcct 11480035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 12049157 - 12049118
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12049157 acttttggaaagataggggtccaaaagtgcaattaagcct 12049118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 15526742 - 15526703
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  15526742 acttttggaaagataggggtccaaaagtgcaattaagcct 15526703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 16079453 - 16079492
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  16079453 acttttggaaagataggagtccaaaagtgcaattaagcct 16079492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 16521192 - 16521153
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  16521192 acttttggaaagataggggtccaaaagtgcaattaagcct 16521153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 16666848 - 16666887
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  16666848 acttttggaaagataggggtccaaaagtgcaattaagcct 16666887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 27264147 - 27264108
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27264147 acttttggaaagataggggtccaaaagtgcaattaagcct 27264108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 28394971 - 28394932
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28394971 acttttggaaagataggggtccaaaagtgcaattaagcct 28394932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 28620077 - 28620038
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28620077 acttttggaaagataggggtccaaaagtgcaattaagcct 28620038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 29401364 - 29401403
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29401364 acttttggaaagataggggtccaaaagtgcaattaagcct 29401403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 30894163 - 30894124
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  30894163 acttttggaaagataggggtccaaaagtgcaattaagcct 30894124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 32556020 - 32556059
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32556020 acttttggaaagatatgggtccaaaagtgcaattaagcct 32556059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 35306748 - 35306709
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  35306748 acttttggaaagataggggtccaaaagtgcaattaagcct 35306709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 40297703 - 40297664
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40297703 acttttggaaagataggggtccaaaagtgcaattaagcct 40297664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 40768163 - 40768202
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40768163 acttttggaaagataggggtccaaaagtgcaattaagcct 40768202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 41032461 - 41032500
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  41032461 acttttggaaagatagggatccaaaagtgcaattaagcct 41032500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 43586061 - 43586100
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  43586061 acttttggaaagataggggtccaaaagtgcaattaagcct 43586100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 223169 - 223207
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  223169 acttttggaaagataggggtccaaaagtgcaattaagcc 223207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 8986648 - 8986610
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  8986648 acttttggaaagataggagtccaaaagtgcaattaagcc 8986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 21583598 - 21583636
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21583598 acttttggaaagataggagtccaaaagtgcaattaagcc 21583636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 23502403 - 23502441
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  23502403 acttttggaaagataggggtccaaaagtgcaattaagcc 23502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 2546409 - 2546372
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  2546409 acttttggaaagataggggtccaaaagtgcaattaagc 2546372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 31172839 - 31172876
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  31172839 acttttggaaagataggggtccaaaagtgcaattaagc 31172876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 41880312 - 41880349
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  41880312 acttttggaaagataggggtccaaaagtgcaattaagc 41880349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 13356824 - 13356863
Alignment:
Q  317 acttttggaaagataggg--tccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  13356824 acttttggaaagataggggatccaaaagtgcaattaagcc 13356863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 355
Target Start/End: Complemental strand, 18266387 - 18266351
Alignment:
Q  320 tttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| |||||||||||||||||||||    
T  18266387 tttggaaagataggggtccaaaagtgcaattaagcct 18266351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 20974498 - 20974462
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  20974498 acttttggaaagataggggtccaaaagtgcaattaag 20974462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 28251436 - 28251400
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28251436 acttttggaaagataggggtccaaaagtgcaattaag 28251400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 28395208 - 28395244
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28395208 acttttggaaagataggggtccaaaagtgcaattaag 28395244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 35055815 - 35055776
Alignment:
Q  317 acttttggaaagataggg--tccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  35055815 acttttggaaagataggggatccaaaagtgcaattaagcc 35055776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 354
Target Start/End: Original strand, 866405 - 866457
Alignment:
Q  303 taaggcttaattgcacttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  866405 taaggcttaattgcacttttggaaagatagggatccaaaagtgcaattaagcc 866457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 33777215 - 33777166
Alignment:
Q  306 ggcttaattgcacttttggaaagata-gggtccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  33777215 ggcttaattgcacttttagaaagataggggtccaaaagtgcaattaagcc 33777166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 40814924 - 40814887
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40814924 acttttggaaagatagggtccaaaagtgcaattaagcc 40814887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 43677377 - 43677414
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcc 354  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  43677377 acttttgaaaagatagggtccaaaagtgcaattaagcc 43677414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 25098190 - 25098154
Alignment:
Q  318 cttttggaaagatagggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25098190 cttttggaaagatagggtccaaaattgcaattaagcc 25098154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 922438 - 922477
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  922438 acttttggaaagataggggtccaaaagtgcaattaagcct 922477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 7598647 - 7598608
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  7598647 acttttggaaagatatgggtccaaaagtgcaattaagcct 7598608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 8774336 - 8774297
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  8774336 acttttggaaagataggggtccaaaagtgcaattaagcct 8774297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 10279952 - 10279991
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  10279952 acttttggaaagataggagtccaaaagtgcaattaagcct 10279991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 11018439 - 11018400
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11018439 acttttggaaagataggggtccaaaagtgcaattaagcct 11018400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 11051934 - 11051895
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11051934 acttttggaaagataggggtccaaaagtgcaattaagcct 11051895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 11204545 - 11204506
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11204545 acttttggaaagataggggtccaaaagtgcaattaagcct 11204506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 12690059 - 12690020
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12690059 acttttggaaagataggggtccaaaagtgcaattaagcct 12690020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 15161335 - 15161296
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  15161335 acttttggaaagatatgggtccaaaagtgcaattaagcct 15161296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 15161573 - 15161612
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  15161573 acttttggaaagataggggtccaaaagtgcaattaagcct 15161612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 20017652 - 20017691
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20017652 acttttggaaagataggggtccaaaagtgcaattaagcct 20017691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 20596138 - 20596177
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20596138 acttttggaaagataggggtccaaaagtgcaattaagcct 20596177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 23342236 - 23342275
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23342236 acttttggaaagataggggtccaaaagtgcaattaagcct 23342275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 23356731 - 23356692
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23356731 acttttggaaagataggggtccaaaagtgcaattaagcct 23356692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 26861312 - 26861273
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  26861312 acttttggaaagataggggtccaaaagtgcaattaagcct 26861273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 27396801 - 27396840
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27396801 acttttggaaagataggggtccaaaagtgcaattaagcct 27396840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 29794731 - 29794692
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29794731 acttttggaaagataggggtccaaaagtgcaattaagcct 29794692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 43677141 - 43677102
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  43677141 acttttggaaagatagggatccaaaagtgcaattaagcct 43677102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 43914616 - 43914577
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  43914616 acttttggaaagataggggtccaaaagtgcaattaagcct 43914577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 45012670 - 45012631
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45012670 acttttggaaagataggggtccaaaagtgcaattaagcct 45012631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 45664415 - 45664454
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45664415 acttttggaaagataggggtccaaaagtgcaattaagcct 45664454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 45885224 - 45885263
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  45885224 acttttggaaagataggggtccaaaagtgcaattaagcct 45885263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 46320951 - 46320990
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  46320951 acttttggaaagatagaggtccaaaagtgcaattaagcct 46320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 52233469 - 52233430
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52233469 acttttggaaagataggggtccaaaagtgcaattaagcct 52233430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 3264038 - 3264000
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3264038 acttttggaaagataggggtccaaaagtgcaattaagcc 3264000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 6183020 - 6182982
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6183020 acttttggaaagataggggtccaaaagtgcaattaagcc 6182982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 8774572 - 8774610
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcc 354  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8774572 acttttggaaagataagggtccaaaagtgcaattaagcc 8774610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 9058204 - 9058166
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  9058204 acttttggaaagataggggtccaaaagtgcaattaagcc 9058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 11052172 - 11052210
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11052172 acttttggaaagataggggtccaaaagtgcaattaagcc 11052210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 18589887 - 18589849
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  18589887 acttttggaaagatagaggtccaaaagtgcaattaagcc 18589849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 22204581 - 22204619
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  22204581 acttttggaaagatagaggtccaaaagtgcaattaagcc 22204619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 23793057 - 23793095
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  23793057 acttttggaaagataggggtccaaaagtgcaattaagcc 23793095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 26434965 - 26435003
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  26434965 acttttggaaagataggggtccaaaagtgcaattaagcc 26435003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 32341533 - 32341495
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  32341533 acttttggaaagataggggtccaaaagtgcaattaagcc 32341495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 37029203 - 37029241
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  37029203 acttttggaaagatagaggtccaaaagtgcaattaagcc 37029241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 42407160 - 42407198
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  42407160 acttttggaaagataggggtccaaaagtgcaattaagcc 42407198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 52201403 - 52201365
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  52201403 acttttgaaaagataggggccaaaagtgcaattaagcct 52201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 6912254 - 6912217
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcc 354  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  6912254 acttttgaaaagataggggccaaaagtgcaattaagcc 6912217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 8029232 - 8029269
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8029232 acttttggaaagatagggatccaaaagtgcaattaagc 8029269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 20288024 - 20288061
Alignment:
Q  319 ttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  20288024 ttttggaaagatatgggtccaaaagtgcaattaagcct 20288061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 25098405 - 25098442
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25098405 acttttggaaagataggggtccaaaagtgcaattaagc 25098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 31797100 - 31797063
Alignment:
Q  319 ttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||    
T  31797100 ttttggaaagataggggtccaaaagtgcaattaagcct 31797063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 49056397 - 49056437
Alignment:
Q  317 acttttggaaagataggg--tccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  49056397 acttttggaaagatagggggtccaaaagtgcaattaagcct 49056437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 14460339 - 14460303
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  14460339 acttttggaaagataggggtccaaaagtgcaattaag 14460303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 30289422 - 30289458
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaag 352  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30289422 acttttggaaagatatgggtccaaaagtgcaattaag 30289458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 47113426 - 47113390
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  47113426 acttttggaaagataggggtccaaaagtgcaattaag 47113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 49056162 - 49056123
Alignment:
Q  317 acttttggaaagataggg--tccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  49056162 acttttggaaagatagggggtccaaaagtgcaattaagcc 49056123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 304 - 354
Target Start/End: Original strand, 7318897 - 7318948
Alignment:
Q  304 aaggcttaattgcacttttggaaagata-gggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7318897 aaggcttaattgcacttttggaaagataggggtccaaaagtgcaattaagcc 7318948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 35735541 - 35735504
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35735541 acttttggaaagatagggtccaaaagtgcaattaagcc 35735504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 351
Target Start/End: Original strand, 45022595 - 45022641
Alignment:
Q  306 ggcttaattgcacttttggaaagata-gggtccaaaagtgcaattaa 351  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  45022595 ggcttaattgcacttttggaaagataggggtccaaaagggcaattaa 45022641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 45326152 - 45326188
Alignment:
Q  319 ttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| ||||||||||||||||||||    
T  45326152 ttttggaaagatagggaccaaaagtgcaattaagcct 45326188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 1657660 - 1657699
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  1657660 acttttggaaagataggggtccaaaagtgcaattaagcct 1657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 4132792 - 4132753
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4132792 acttttggaaagatagggatccaaaagtgcaattaagcct 4132753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 6107155 - 6107116
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6107155 acttttggaaagataggggtccaaaagtgcaattaagcct 6107116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 8870297 - 8870258
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  8870297 acttttggaaagataggggtccaaaagtgcaattaagcct 8870258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 14032074 - 14032035
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  14032074 acttttggaaagataggggtccaaaagtgcaattaagcct 14032035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 20095724 - 20095685
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20095724 acttttggaaagataggggtccaaaagtgcaattaagcct 20095685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 30359117 - 30359156
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  30359117 acttttggaaagataggggtccaaaagtgcaattaagcct 30359156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 30845835 - 30845874
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  30845835 acttttggaaagataggggtccaaaagtgcaattaagcct 30845874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 32332178 - 32332139
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  32332178 acttttggaaagataggggtccaaaagtgcaattaagcct 32332139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 36226690 - 36226729
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  36226690 acttttggaaagataggggtccaaaagtgcaattaagcct 36226729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 37205816 - 37205855
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  37205816 acttttggaaagataggggtccaaaagtgcaattaagcct 37205855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 38593225 - 38593186
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  38593225 acttttggaaagataggggtccaaaagtgcaattaagcct 38593186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 39616826 - 39616865
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  39616826 acttttggaaagataggggtccaaaagtgcaattaagcct 39616865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 42267733 - 42267772
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  42267733 acttttggaaagataggggtccaaaagtgcaattaagcct 42267772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 42906410 - 42906371
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  42906410 acttttggaaagatagaggtccaaaagtgcaattaagcct 42906371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 42906649 - 42906688
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  42906649 acttttggaaagataggggtccaaaagtgcaattaagcct 42906688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 414705 - 414667
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  414705 acttttggaaagataggggtccaaaagtgcaattaagcc 414667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 2321792 - 2321830
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2321792 acttttggaaagataggggtccaaaagtgcaattaagcc 2321830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 334
Target Start/End: Complemental strand, 3411719 - 3411689
Alignment:
Q  304 aaggcttaattgcacttttggaaagataggg 334  Q
    |||||||||||||||||||||||||||||||    
T  3411719 aaggcttaattgcacttttggaaagataggg 3411689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 5734460 - 5734498
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5734460 acttttggaaagataggggtccaaaagtgcaattaagcc 5734498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 7151117 - 7151155
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7151117 acttttggaaagataggggtccaaaagtgcaattaagcc 7151155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 20095962 - 20096000
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  20095962 acttttggaaagataggggtccaaaagtgcaattaagcc 20096000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 20283950 - 20283988
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  20283950 acttttggaaagataggggtccaaaagtgcaattaagcc 20283988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 21070578 - 21070616
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  21070578 acttttggaaagataggggtccaaaagtgcaattaagcc 21070616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 39515596 - 39515558
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  39515596 acttttggaaagataggggtccaaaagtgcaattaagcc 39515558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 40918649 - 40918687
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  40918649 acttttggaaagataggggtccaaaagtgcaattaagcc 40918687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 6107392 - 6107429
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  6107392 acttttggaaagataggggtccaaaagtgcaattaagc 6107429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 27822911 - 27822874
Alignment:
Q  319 ttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||    
T  27822911 ttttggaaagataggggtccaaaagtgcaattaagcct 27822874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 39626244 - 39626281
Alignment:
Q  318 cttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  39626244 cttttggaaagataggggtccaaaagtgcaattaagcc 39626281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 39635794 - 39635831
Alignment:
Q  318 cttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  39635794 cttttggaaagataggggtccaaaagtgcaattaagcc 39635831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 20791054 - 20791018
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  20791054 acttttggaaagataggggtccaaaagtgcaattaag 20791018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 20814018 - 20814054
Alignment:
Q  319 ttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||| ||||||||||||||||||||    
T  20814018 ttttggaaagataggggtccaaaagtgcaattaagcc 20814054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 36788292 - 36788256
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  36788292 acttttggaaagataggggtccaaaagtgcaattaag 36788256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 38166522 - 38166486
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38166522 acttttggaaagataggggtccaaaagtgcaattaag 38166486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 38166761 - 38166797
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38166761 acttttggaaagataggggtccaaaagtgcaattaag 38166797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 41206200 - 41206164
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaag 352  Q
    ||||||||||||||| |||||||||||||||||||||    
T  41206200 acttttggaaagatatgggtccaaaagtgcaattaag 41206164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 42363616 - 42363580
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaag 352  Q
    ||||||||||||||| |||||||||||||||||||||    
T  42363616 acttttggaaagataagggtccaaaagtgcaattaag 42363580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 355
Target Start/End: Original strand, 42642366 - 42642402
Alignment:
Q  320 tttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| |||||||||||||||||||||    
T  42642366 tttggaaagataggggtccaaaagtgcaattaagcct 42642402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 9126642 - 9126689
Alignment:
Q  309 ttaattgcacttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9126642 ttaattgcacttttggaaagataggggtccaaaagtgcaattaagcct 9126689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 1896936 - 1896897
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  1896936 acttttggaaagataggggtccaaaagtgcaattaagcct 1896897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 2100418 - 2100379
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  2100418 acttttggaaagatagaggtccaaaagtgcaattaagcct 2100379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 4405516 - 4405555
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4405516 acttttggaaagataggggtccaaaagtgcaattaagcct 4405555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 6261652 - 6261691
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6261652 acttttggaaagataggggtccaaaagtgcaattaagcct 6261691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 7391523 - 7391484
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7391523 acttttggaaagataggggtccaaaagtgcaattaagcct 7391484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 7391752 - 7391791
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  7391752 acttttggaaagatagaggtccaaaagtgcaattaagcct 7391791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 10893927 - 10893888
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10893927 acttttggaaagataggggtccaaaagtgcaattaagcct 10893888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 11213458 - 11213497
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11213458 acttttggaaagataggggtccaaaagtgcaattaagcct 11213497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 11746036 - 11745997
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11746036 acttttggaaagataggggtccaaaagtgcaattaagcct 11745997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 13042446 - 13042407
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  13042446 acttttggaaagataggggtccaaaagtgcaattaagcct 13042407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 15273036 - 15272997
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  15273036 acttttggaaagataggggtccaaaagtgcaattaagcct 15272997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 20080156 - 20080117
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20080156 acttttggaaagataggggtccaaaagtgcaattaagcct 20080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 23291294 - 23291255
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23291294 acttttggaaagataggggtccaaaagtgcaattaagcct 23291255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 23585253 - 23585292
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23585253 acttttggaaagataggggtccaaaagtgcaattaagcct 23585292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 26716646 - 26716685
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  26716646 acttttggaaagataggggtccaaaagtgcaattaagcct 26716685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 27223584 - 27223623
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27223584 acttttggaaagataggggtccaaaagtgcaattaagcct 27223623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 29697118 - 29697157
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29697118 acttttggaaagataggggtccaaaagtgcaattaagcct 29697157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 30965967 - 30966006
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30965967 acttttggaaagataagggtccaaaagtgcaattaagcct 30966006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 31951476 - 31951515
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  31951476 acttttggaaagataggggtccaaaagtgcaattaagcct 31951515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 6261419 - 6261381
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6261419 acttttggaaagataggggtccaaaagtgcaattaagcc 6261381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 10894145 - 10894183
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  10894145 acttttggaaagatagaggtccaaaagtgcaattaagcc 10894183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 13042683 - 13042721
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13042683 acttttggaaagataggggtccaaaagtgcaattaagcc 13042721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 25749993 - 25749955
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25749993 acttttggaaagataggggtccaaaagtgcaattaagcc 25749955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 352
Target Start/End: Complemental strand, 1358568 - 1358535
Alignment:
Q  319 ttttggaaagatagggtccaaaagtgcaattaag 352  Q
    ||||| ||||||||||||||||||||||||||||    
T  1358568 ttttgaaaagatagggtccaaaagtgcaattaag 1358535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 22279537 - 22279500
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagc 353  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  22279537 acttttggaaagataggagtccaaaagtgcaattaagc 22279500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 26171484 - 26171521
Alignment:
Q  319 ttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||    
T  26171484 ttttggaaagataggggtccaaaagtgcaattaagcct 26171521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 31833543 - 31833580
Alignment:
Q  319 ttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||    
T  31833543 ttttggaaagataggggtccaaaagtgcaattaagcct 31833580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 31741046 - 31741082
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  31741046 acttttggaaagataggggtccaaaagtgcaattaag 31741082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 26675331 - 26675369
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26675331 acttttggaaagatagggtccaaaagtgcaattaagcct 26675369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 104238 - 104199
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  104238 acttttggaaagataggggtccaaaagtgcaattaagcct 104199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 4902174 - 4902135
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4902174 acttttggaaagataggggtccaaaagtgcaattaagcct 4902135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 4902431 - 4902470
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4902431 acttttggaaagataggggtccaaaagtgcaattaagcct 4902470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 5344546 - 5344585
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  5344546 acttttggaaagataagggtccaaaagtgcaattaagcct 5344585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 6386769 - 6386730
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6386769 acttttggaaagataggggtccaaaagtgcaattaagcct 6386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 7396179 - 7396140
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7396179 acttttggaaagataggggtccaaaagtgcaattaagcct 7396140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 7666238 - 7666199
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7666238 acttttggaaagataggggtccaaaagtgcaattaagcct 7666199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 7705628 - 7705589
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7705628 acttttggaaagataggggtccaaaagtgcaattaagcct 7705589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 7705864 - 7705903
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7705864 acttttggaaagatagggatccaaaagtgcaattaagcct 7705903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 11529797 - 11529758
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11529797 acttttggaaagataggggtccaaaagtgcaattaagcct 11529758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 12641094 - 12641133
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12641094 acttttggaaagataggggtccaaaagtgcaattaagcct 12641133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 13021254 - 13021293
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  13021254 acttttggaaagataggggtccaaaagtgcaattaagcct 13021293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 14578476 - 14578437
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  14578476 acttttggaaagataggggtccaaaagtgcaattaagcct 14578437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 23315653 - 23315692
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23315653 acttttggaaagataggggtccaaaagtgcaattaagcct 23315692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 24415111 - 24415072
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  24415111 acttttggaaagataggggtccaaaagtgcaattaagcct 24415072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 24415349 - 24415388
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  24415349 acttttggaaagataggggtccaaaagtgcaattaagcct 24415388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 27246897 - 27246858
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27246897 acttttggaaagataggggtccaaaagtgcaattaagcct 27246858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 29548218 - 29548179
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  29548218 acttttggaaagataagggtccaaaagtgcaattaagcct 29548179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 29548455 - 29548494
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29548455 acttttggaaagataggggtccaaaagtgcaattaagcct 29548494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 35364470 - 35364509
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  35364470 acttttggaaagataggagtccaaaagtgcaattaagcct 35364509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 37289493 - 37289454
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  37289493 acttttggaaagataggggtccaaaagtgcaattaagcct 37289454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 39136572 - 39136611
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  39136572 acttttggaaagataggggtccaaaagtgcaattaagcct 39136611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 41205536 - 41205497
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  41205536 acttttggaaagataggggtccaaaagtgcaattaagcct 41205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 41205771 - 41205810
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  41205771 acttttggaaagataggggtccaaaagtgcaattaagcct 41205810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 42672343 - 42672382
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  42672343 acttttggaaagataggggtccaaaagtgcaattaagcct 42672382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 43821973 - 43822012
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  43821973 acttttggaaagataggggtccaaaagtgcaattaagcct 43822012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 44822489 - 44822438
Alignment:
Q  306 ggcttaattgca-cttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  44822489 ggcttaattgcaacttttggaaagataggggtccaaaggtgcaattaagcct 44822438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 51537468 - 51537429
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  51537468 acttttggaaagataggggtccaaaagtgcaattaagcct 51537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 51696574 - 51696535
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  51696574 acttttggaaagataggggtccaaaagtgcaattaagcct 51696535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 52045759 - 52045720
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52045759 acttttggaaagataggggtccaaaagtgcaattaagcct 52045720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 52045991 - 52046030
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52045991 acttttggaaagataggggtccaaaagtgcaattaagcct 52046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 52114409 - 52114448
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52114409 acttttggaaagatagggatccaaaagtgcaattaagcct 52114448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 52310839 - 52310800
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52310839 acttttggaaagataggggtccaaaagtgcaattaagcct 52310800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 52311077 - 52311116
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52311077 acttttggaaagataggggtccaaaagtgcaattaagcct 52311116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 7666473 - 7666511
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7666473 acttttggaaagataggggtccaaaagtgcaattaagcc 7666511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 11159695 - 11159733
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11159695 acttttggaaagataggggtccaaaagtgcaattaagcc 11159733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 17262360 - 17262398
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17262360 acttttggaaagataggggtccaaaagtgcaattaagcc 17262398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 21536918 - 21536880
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  21536918 acttttggaaagataggggtccaaaagtgcaattaagcc 21536880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 27247134 - 27247172
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  27247134 acttttggaaagataggggtccaaaagtgcaattaagcc 27247172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 34957415 - 34957377
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  34957415 acttttgaaaagataggatccaaaagtgcaattaagcct 34957377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 39946352 - 39946390
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcc 354  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  39946352 acttttggaaagataagggtccaaaagtgcaattaagcc 39946390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 43821757 - 43821719
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  43821757 acttttggaaagataggggtccaaaagtgcaattaagcc 43821719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 48278191 - 48278229
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcc 354  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  48278191 acttttggaaagatagaggtccaaaagtgcaattaagcc 48278229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 19725699 - 19725658
Alignment:
Q  315 gcacttttggaaagatagggt-ccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  19725699 gcacttttggaaagatagggggccaaaagtgcaattaagcct 19725658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 31844062 - 31844099
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  31844062 acttttggaaagataggggtccaaaagtgcaattaagc 31844099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 56296655 - 56296619
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  56296655 acttttggaaagataggggtccaaaagtgcaattaag 56296619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1067 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1067
Description:

Target: scaffold1067; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 351
Target Start/End: Original strand, 1611 - 1645
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaa 351  Q
    |||||||||||||||||||||||||||||||||||    
T  1611 acttttggaaagatagggtccaaaagtgcaattaa 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 3820 - 3782
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  3820 acttttggaaagatagggtccaaaagtgcaattaggcct 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 40790946 - 40790984
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  40790946 acttttggaaagataggggccaaaagtgcaattaagcct 40790984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 3235391 - 3235430
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  3235391 acttttggaaagataggggtccaaaagtgcaattaagcct 3235430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 5096826 - 5096787
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5096826 acttttggaaagataggggtccaaaagtgcaattaagcct 5096787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 7974666 - 7974705
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7974666 acttttggaaagataggggtccaaaagtgcaattaagcct 7974705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 10312502 - 10312541
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  10312502 acttttggaaagataggagtccaaaagtgcaattaagcct 10312541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 11900088 - 11900049
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11900088 acttttggaaagataggggtccaaaagtgcaattaagcct 11900049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 11900325 - 11900364
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11900325 acttttggaaagataggggtccaaaagtgcaattaagcct 11900364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 16879513 - 16879552
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  16879513 acttttggaaagataggggtccaaaagtgcaattaagcct 16879552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 18074090 - 18074129
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  18074090 acttttggaaagataggagtccaaaagtgcaattaagcct 18074129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 18852768 - 18852807
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  18852768 acttttggaaagataggggtccaaaagtgcaattaagcct 18852807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 19194198 - 19194159
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19194198 acttttggaaagataggggtccaaaagtgcaattaagcct 19194159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 19194436 - 19194475
Alignment:
Q  317 acttttggaaagatag-ggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  19194436 acttttggaaagatagaggtccaaaagtgcaattaagcct 19194475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 19233378 - 19233339
Alignment:
Q  317 acttttggaaagatagggt-ccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  19233378 acttttggaaagatagggttccaaaagtgcaattaagcct 19233339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 21782641 - 21782602
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21782641 acttttggaaagataggggtccaaaagtgcaattaagcct 21782602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 25683950 - 25683989
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25683950 acttttggaaagataggggtccaaaagtgcaattaagcct 25683989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 25983027 - 25982988
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25983027 acttttggaaagataggggtccaaaagtgcaattaagcct 25982988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 27432528 - 27432489
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27432528 acttttggaaagataggggtccaaaagtgcaattaagcct 27432489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 30699061 - 30699022
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  30699061 acttttggaaagatagggatccaaaagtgcaattaagcct 30699022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 34288086 - 34288047
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  34288086 acttttggaaagataggggtccaaaagtgcaattaagcct 34288047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 34533252 - 34533213
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  34533252 acttttggaaagataggggtccaaaagtgcaattaagcct 34533213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 35437489 - 35437528
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  35437489 acttttggaaagataggggtccaaaagtgcaattaagcct 35437528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 35924166 - 35924205
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  35924166 acttttggaaagataggggtccaaaagtgcaattaagcct 35924205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 36376098 - 36376059
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  36376098 acttttggaaagataggggtccaaaagtgcaattaagcct 36376059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 38879425 - 38879464
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  38879425 acttttggaaagataggggtccaaaagtgcaattaagcct 38879464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 39753910 - 39753871
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  39753910 acttttggaaagataggggtccaaaagtgcaattaagcct 39753871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 42997094 - 42997055
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  42997094 acttttggaaagataggggtccaaaagtgcaattaagcct 42997055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 44214697 - 44214658
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  44214697 acttttggaaagataggggtccaaaagtgcaattaagcct 44214658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 46622592 - 46622553
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  46622592 acttttggaaagataggggtccaaaagtgcaattaagcct 46622553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 10385724 - 10385762
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  10385724 acttttggaaagataggggtccaaaagtgcaattaagcc 10385762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 17167892 - 17167854
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  17167892 acttttgaaaagataggggccaaaagtgcaattaagcct 17167854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 19233594 - 19233632
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19233594 acttttggaaagataggggtccaaaagtgcaattaagcc 19233632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 39976767 - 39976729
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  39976767 acttttggaaagataggggtccaaaagtgcaattaagcc 39976729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 45863246 - 45863284
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  45863246 acttttggaaagatagaggccaaaagtgcaattaagcct 45863284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 17168152 - 17168189
Alignment:
Q  317 acttttggaaagatagggtccaaaagtgcaattaagcc 354  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  17168152 acttttgaaaagatagggaccaaaagtgcaattaagcc 17168189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 38053182 - 38053145
Alignment:
Q  319 ttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||    
T  38053182 ttttggaaagataggggtccaaaagtgcaattaagcct 38053145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 43632377 - 43632340
Alignment:
Q  319 ttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||| |||||||||||||||||||||    
T  43632377 ttttggaaagataggggtccaaaagtgcaattaagcct 43632340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 44189443 - 44189406
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  44189443 acttttggaaagataggggtccaaaagtgcaattaagc 44189406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 20387591 - 20387555
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaag 352  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20387591 acttttggaaagataagggtccaaaagtgcaattaag 20387555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 20392065 - 20392029
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaag 352  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20392065 acttttggaaagataagggtccaaaagtgcaattaag 20392029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 35923930 - 35923894
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  35923930 acttttggaaagataggggtccaaaagtgcaattaag 35923894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1171 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1171
Description:

Target: scaffold1171; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 857 - 818
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  857 acttttggaaagataggggtccaaaagtgcaattaagcct 818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 108 - 147
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  108 acttttggaaagataggggtccaaaagtgcaattaagcct 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 4796 - 4835
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4796 acttttggaaagataggggtccaaaagtgcaattaagcct 4835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 6906 - 6867
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6906 acttttggaaagataggggtccaaaagtgcaattaagcct 6867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 5630 - 5591
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5630 acttttggaaagataggggtccaaaagtgcaattaagcct 5591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 5868 - 5907
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5868 acttttggaaagataggggtccaaaagtgcaattaagcct 5907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 7759 - 7720
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  7759 acttttggaaagataggggtccaaaagtgcaattaagcct 7720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 7996 - 8033
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagc 353  Q
    |||||||||||||||||| |||||||||||||||||||    
T  7996 acttttggaaagataggggtccaaaagtgcaattaagc 8033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 10903 - 10942
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10903 acttttggaaagataggggtccaaaagtgcaattaagcct 10942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 16193 - 16232
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  16193 acttttggaaagataggggtccaaaagtgcaattaagcct 16232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 9985 - 9946
Alignment:
Q  317 acttttggaaagatagg-gtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  9985 acttttggaaagataggagtccaaaagtgcaattaagcct 9946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 29688 - 29649
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29688 acttttggaaagataggggtccaaaagtgcaattaagcct 29649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 29926 - 29965
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29926 acttttggaaagataggggtccaaaagtgcaattaagcct 29965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 20901 - 20940
Alignment:
Q  317 acttttggaaagata-gggtccaaaagtgcaattaagcct 355  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  20901 acttttggaaagataagggtccaaaagtgcaattaagcct 20940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 81577 - 81616
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  81577 acttttggaaagataggggtccaaaagtgcaattaagcct 81616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 79028 - 78989
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  79028 acttttggaaagataggggtccaaaagtgcaattaagcct 78989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 238899 - 238938
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  238899 acttttggaaagataggggtccaaaagtgcaattaagcct 238938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 400742 - 400703
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  400742 acttttggaaagataggggtccaaaagtgcaattaagcct 400703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 400981 - 401020
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcct 355  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  400981 acttttggaaagataggggtccaaaagtgcaattaagcct 401020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 16029 - 16067
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  16029 acttttggaaagataggggtccaaaagtgcaattaagcc 16067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 21322 - 21360
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  21322 acttttggaaagataggggtccaaaagtgcaattaagcc 21360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 21102 - 21066
Alignment:
Q  319 ttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||| ||||||||||||||||||||    
T  21102 ttttggaaagatagggatccaaaagtgcaattaagcc 21066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 22333 - 22295
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  22333 acttttggaaagataggggtccaaaagtgcaattaagcc 22295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 22551 - 22589
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaagcc 354  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  22551 acttttggaaagataggggtccaaaagtgcaattaagcc 22589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 20585 - 20614
Alignment:
Q  296 ttatatttaaggcttaattgcacttttgga 325  Q
    ||||||||||||||||||||||||||||||    
T  20585 ttatatttaaggcttaattgcacttttgga 20614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0864 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0864
Description:

Target: scaffold0864; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 2682 - 2646
Alignment:
Q  317 acttttggaaagataggg-tccaaaagtgcaattaag 352  Q
    |||||||||||||||||| ||||||||||||||||||    
T  2682 acttttggaaagataggggtccaaaagtgcaattaag 2646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University