View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10962_high_11 (Length: 214)
Name: NF10962_high_11
Description: NF10962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10962_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 30769478 - 30769659
Alignment:
| Q |
15 |
cagagactctattctgttctgttccgctccgtttcattttattccaaaactcaccaattctaatggatccaccacttatctccaccgccgcaaccaccat |
114 |
Q |
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| T |
30769478 |
cagagactccatcctgttctgttccgctccgtttcattttattccaaaactcaccaattctaatggatccaccgcttatctccaccgccgcaaccaccat |
30769577 |
T |
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| Q |
115 |
tcctcataacatcatccaacaaaactatcctgaatcggtcgagtctttatcatcgccaccaccacagccaccaccacgatca |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30769578 |
tcctcataacatcatccaacaaaactatcctgaatcggtcgagtctttatcatcgccaccaccacagccaccaccacgatca |
30769659 |
T |
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