View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10965_low_19 (Length: 289)

Name: NF10965_low_19
Description: NF10965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10965_low_19
NF10965_low_19
[»] chr6 (14 HSPs)
chr6 (10-289)||(34868720-34869000)
chr6 (74-127)||(7151420-7151473)
chr6 (50-127)||(16766705-16766782)
chr6 (50-127)||(31384928-31385004)
chr6 (72-127)||(9025490-9025545)
chr6 (72-127)||(10888970-10889025)
chr6 (86-127)||(7265603-7265644)
chr6 (66-127)||(7723240-7723301)
chr6 (70-127)||(10770668-10770725)
chr6 (89-126)||(16388246-16388283)
chr6 (86-127)||(19040360-19040401)
chr6 (91-127)||(5970123-5970159)
chr6 (75-127)||(24115846-24115898)
chr6 (91-127)||(34595142-34595178)
[»] chr7 (16 HSPs)
chr7 (50-127)||(32308128-32308205)
chr7 (38-127)||(9933283-9933370)
chr7 (73-127)||(35297669-35297723)
chr7 (91-127)||(3991332-3991368)
chr7 (72-127)||(18013070-18013125)
chr7 (91-125)||(9778510-9778544)
chr7 (89-127)||(11665453-11665491)
chr7 (86-128)||(23849468-23849510)
chr7 (86-127)||(3721101-3721142)
chr7 (72-125)||(5548686-5548739)
chr7 (86-127)||(19206058-19206099)
chr7 (91-127)||(11061091-11061127)
chr7 (72-124)||(17307904-17307956)
chr7 (91-127)||(24339650-24339686)
chr7 (91-127)||(25481910-25481946)
chr7 (91-127)||(26033476-26033512)
[»] scaffold1528 (1 HSPs)
scaffold1528 (40-127)||(1043-1130)
[»] chr5 (11 HSPs)
chr5 (48-127)||(3751902-3751981)
chr5 (56-127)||(3966511-3966582)
chr5 (67-127)||(39698549-39698609)
chr5 (64-127)||(35017045-35017108)
chr5 (73-127)||(6471886-6471940)
chr5 (89-127)||(40131629-40131667)
chr5 (91-127)||(6247630-6247666)
chr5 (91-127)||(21191071-21191107)
chr5 (91-127)||(21576760-21576796)
chr5 (67-127)||(22423803-22423863)
chr5 (72-128)||(38749559-38749615)
[»] chr1 (20 HSPs)
chr1 (40-127)||(17754319-17754406)
chr1 (62-127)||(6427358-6427423)
chr1 (71-127)||(7918206-7918262)
chr1 (67-125)||(25361896-25361954)
chr1 (50-127)||(27471540-27471617)
chr1 (48-128)||(47989504-47989584)
chr1 (72-127)||(1486705-1486760)
chr1 (92-127)||(9449024-9449059)
chr1 (54-125)||(44482240-44482311)
chr1 (89-127)||(398778-398816)
chr1 (41-127)||(16164280-16164366)
chr1 (86-127)||(1864890-1864931)
chr1 (53-127)||(31694687-31694763)
chr1 (86-127)||(40181879-40181920)
chr1 (91-127)||(113307-113343)
chr1 (87-127)||(5898277-5898317)
chr1 (67-127)||(9828052-9828112)
chr1 (67-107)||(12715148-12715188)
chr1 (91-127)||(24577201-24577237)
chr1 (91-127)||(40258948-40258984)
[»] chr8 (10 HSPs)
chr8 (50-127)||(11803267-11803344)
chr8 (73-127)||(11927083-11927137)
chr8 (85-127)||(29776044-29776086)
chr8 (86-127)||(34897093-34897134)
chr8 (91-127)||(4948660-4948696)
chr8 (91-127)||(22651984-22652020)
chr8 (67-127)||(24362193-24362253)
chr8 (91-127)||(25566849-25566885)
chr8 (91-127)||(29510319-29510355)
chr8 (67-127)||(35519798-35519858)
[»] scaffold0008 (1 HSPs)
scaffold0008 (67-127)||(263363-263423)
[»] chr3 (16 HSPs)
chr3 (72-127)||(11313796-11313851)
chr3 (72-127)||(25948883-25948938)
chr3 (66-127)||(1550148-1550209)
chr3 (50-127)||(4987265-4987342)
chr3 (86-127)||(7928458-7928499)
chr3 (50-127)||(16789020-16789097)
chr3 (91-127)||(21257001-21257037)
chr3 (73-124)||(15314873-15314924)
chr3 (86-123)||(1438816-1438853)
chr3 (86-127)||(12704015-12704056)
chr3 (86-127)||(29508452-29508493)
chr3 (67-127)||(14209121-14209181)
chr3 (67-127)||(16192741-16192801)
chr3 (91-127)||(26508118-26508154)
chr3 (91-127)||(28918009-28918045)
chr3 (91-127)||(34910325-34910361)
[»] chr4 (12 HSPs)
chr4 (84-126)||(9996849-9996891)
chr4 (63-127)||(903930-903994)
chr4 (91-127)||(23293001-23293037)
chr4 (76-127)||(15029773-15029824)
chr4 (89-127)||(54580036-54580074)
chr4 (86-127)||(22440610-22440651)
chr4 (86-127)||(36635332-36635373)
chr4 (71-127)||(11596347-11596403)
chr4 (91-127)||(28964263-28964299)
chr4 (91-127)||(29205452-29205488)
chr4 (87-127)||(40179647-40179687)
chr4 (67-127)||(51701266-51701326)
[»] scaffold0123 (1 HSPs)
scaffold0123 (50-123)||(44499-44572)
[»] chr2 (10 HSPs)
chr2 (86-127)||(28677917-28677958)
chr2 (55-127)||(12668402-12668474)
chr2 (77-127)||(32199141-32199191)
chr2 (63-128)||(17776594-17776659)
chr2 (86-127)||(21616770-21616811)
chr2 (50-127)||(36756318-36756395)
chr2 (71-127)||(18622614-18622670)
chr2 (91-127)||(30404865-30404901)
chr2 (91-127)||(30717545-30717581)
chr2 (63-127)||(44860328-44860392)
[»] scaffold0223 (1 HSPs)
scaffold0223 (72-127)||(20180-20235)
[»] scaffold0136 (1 HSPs)
scaffold0136 (50-127)||(3823-3900)
[»] scaffold0361 (1 HSPs)
scaffold0361 (91-127)||(14538-14574)
[»] scaffold0103 (1 HSPs)
scaffold0103 (91-127)||(51819-51855)
[»] scaffold0027 (1 HSPs)
scaffold0027 (91-127)||(46690-46726)


Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 10 - 289
Target Start/End: Original strand, 34868720 - 34869000
Alignment:
Q  10 gaagcagagacacttcttggattacatgtgtctggtgccagacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgt 109  Q
    |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34868720 gaagcaaagacacttcttggattacatgtgtctggtgccggacacgtgttgtatccaacactgacacgacactaagacatataattacactgaattatgt 34868819  T
Q  110 ggttttttcaaa-ttattatgctattcaaatcatatacattatcgtttcctcagtaactcaccaacctcacaataatcccatcaaaagaagcataatcaa 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34868820 ggtttttttaaaattattatgctattcaaatcatatacattatcgtttcctcagtaactcaccaacctcacaataatcccatcaaaagaagcataatcaa 34868919  T
Q  209 gaacaatnnnnnnntcacaacaaagatgaagaactagaaaaaatagccgcgatgagttgaagaaggaagatggagaagagg 289  Q
    |||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34868920 gaacaataaaaaaatcacaacaaagatgaagaactagaaaaaataaccgcgatgagttgaagaaggaagatggagaagagg 34869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 7151473 - 7151420
Alignment:
Q  74 cacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||| || ||||||||||| ||| ||||||||| ||||||||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 16766782 - 16766705
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||| ||| |||| ||||||||||  | || | |||||| ||||||||||||| ||||||||||||||||    
T  16766782 gacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 16766705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 31385004 - 31384928
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| |||| || ||||||||| |||||||||| | || | |||||| ||||||||||||| ||||||||||||||||    
T  31385004 gacacgtgtcgtgtccaacact-acacgacactgacacttgtaattacactgaattatgtgattttttcaaattatta 31384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 9025490 - 9025545
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||  | ||||||||||| ||||||||||||| |||| |||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 10888970 - 10889025
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||||| ||||||||| | ||| ||||||||| |||| |||||||||||    
T  10888970 gacacgacactaacacatataatcacactaaattatgtgattttatcaaattatta 10889025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 7265603 - 7265644
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  7265603 acatataattacactgaattatgtgattttctcaaattatta 7265644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 7723240 - 7723301
Alignment:
Q  66 aacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||| ||||||||||  | |||||||||||| ||||||||| || |||| |||||||||||    
T  7723240 aacaccgacacgacaccgatacatataattatgctgaattatatgattttctcaaattatta 7723301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 10770668 - 10770725
Alignment:
Q  70 ctgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||||  | || | |||||| ||||||||||||| ||||||||||||||||    
T  10770668 ctgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 10770725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 16388246 - 16388283
Alignment:
Q  89 tataattatactgaattatgtggttttttcaaattatt 126  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  16388246 tataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 19040401 - 19040360
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  19040401 acatataattacactgaattatgtgattttctcaaattatta 19040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 5970123 - 5970159
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  5970123 taattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 24115846 - 24115898
Alignment:
Q  75 acgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||| || | ||||||||||| ||||||||||| |||||| |||||||||    
T  24115846 acgacaccaacatatataattatattgaattatgtgattttttgaaattatta 24115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 34595178 - 34595142
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  34595178 taattacactgaattatgtgattttttcaaattatta 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 32308205 - 32308128
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||| || |||||||| ||||||||||| | ||||| ||||| ||||||||||||| |||| |||||||||||    
T  32308205 gacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattatta 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 9933370 - 9933283
Alignment:
Q  38 tgtctggtgccagacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||| ||| ||||||||||| || ||| |||| |||||||||||  |||| |||| | ||||||| |||||| ||||||||||||||||    
T  9933370 tgtcttgtgtcagacatgtgtcgtgtccgacaccgacacgacact--gacacataagtttactgaaatatgtgattttttcaaattatta 9933283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 35297669 - 35297723
Alignment:
Q  73 acacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||| || ||||||||||||| ||||||||||| |||| |||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 3991368 - 3991332
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||||||||||||| ||||||||||||||||    
T  3991368 taattatactgaattatgtgattttttcaaattatta 3991332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 18013070 - 18013125
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| | ||||||||||| ||||||||||||  |||||| |||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattatta 18013125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 125
Target Start/End: Complemental strand, 9778544 - 9778510
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattat 125  Q
    |||||||||||||||||||| ||||||||||||||    
T  9778544 taattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 11665453 - 11665491
Alignment:
Q  89 tataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  11665453 tataattagactgaattatgtgattttttcaaattatta 11665491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 23849468 - 23849510
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattattat 128  Q
    ||||||||||||||||||||||||| |||| | ||||||||||    
T  23849468 acatataattatactgaattatgtgtttttcttaaattattat 23849510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 3721142 - 3721101
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||||||| ||||||||| |||| |||||||||||    
T  3721142 acatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 5548739 - 5548686
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattat 125  Q
    ||||||||||| | ||||||||||| |||||||||| || |||| |||||||||    
T  5548739 gacacgacactgacacatataattacactgaattatttgattttctcaaattat 5548686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 19206099 - 19206058
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||||| ||||||||||| |||| |||||||||||    
T  19206099 acatataattataatgaattatgtgattttctcaaattatta 19206058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 11061091 - 11061127
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  11061091 taattatactaaattatgtgattttttcaaattatta 11061127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 17307956 - 17307904
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaatta 124  Q
    |||||||||| || ||||||||||| ||||||||||||  |||| ||||||||    
T  17307956 gacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 24339686 - 24339650
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  24339686 taattacactgaattatgtgattttttcaaattatta 24339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 25481946 - 25481910
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  25481946 taattacactgaattatgtgattttttcaaattatta 25481910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 26033476 - 26033512
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  26033476 taattacactgaattatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 1130 - 1043
Alignment:
Q  40 tctggtgccagacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||  |||||| |||||| |||||||| ||||| ||||| | ||||||| ||| ||||||||||||  ||||||||||||||||    
T  1130 tctggtgttagacatttgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattatta 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 3751902 - 3751981
Alignment:
Q  48 cagacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| |||| || | |||||||||||||| ||||| ||||||||||||||| | ||||||| |||| |||||||||||    
T  3751902 cagacacgtgtcgtgttcaacactgacacgatactaacacatataattatacttagttatgtgattttctcaaattatta 3751981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 3966582 - 3966511
Alignment:
Q  56 tgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||| |||||||||||||||  | ||||||||||| |||||||| |||| |||| |||||||||||    
T  3966582 tgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattatta 3966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 39698609 - 39698549
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||||||| | || | |||||| ||||||||||||| ||||||||||||||||    
T  39698609 acaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattatta 39698549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 35017108 - 35017045
Alignment:
Q  64 ccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| |||||||||||||||   |||||||||| ||| ||||||||| |||| |||||||||||    
T  35017108 ccaatactgacacgacactatcccatataattacactaaattatgtgattttctcaaattatta 35017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 6471886 - 6471940
Alignment:
Q  73 acacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||  | ||||||||||| ||||||||||||| |||| |||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 40131667 - 40131629
Alignment:
Q  89 tataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  40131667 tataattaaactgaattatgtgattttttcaaattatta 40131629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 6247666 - 6247630
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  6247666 taattacactgaattatgtgattttttcaaattatta 6247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 21191071 - 21191107
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  21191071 taattacactgaattatgtgattttttcaaattatta 21191107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 21576760 - 21576796
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  21576760 taattacactgaattatgtgattttttcaaattatta 21576796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 22423803 - 22423863
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||||||  | | ||||||||||| ||||||||||| |||| |||||||||||    
T  22423803 acaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattatta 22423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 38749559 - 38749615
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattattat 128  Q
    ||||| |||| || ||||||||||| | ||||||||||  |||||||||||||||||    
T  38749559 gacacaacaccaacacatataattacattgaattatgtcattttttcaaattattat 38749615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 17754406 - 17754319
Alignment:
Q  40 tctggtgccagacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||  |||||| |||||| |||||||| ||||| ||||| | ||||||| ||| ||||||||||||  ||||||||||||||||    
T  17754406 tctggtgttagacatatgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattatta 17754319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 6427423 - 6427358
Alignment:
Q  62 atccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||| |||||||||||| || ||||||||||| | ||||||||||| |||| |||||||||||    
T  6427423 atccaaccctgacacgacaccaacacatataattacattgaattatgtgattttctcaaattatta 6427358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 7918206 - 7918262
Alignment:
Q  71 tgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||||| | ||||||||||| ||||||||||||| |||| |||||||||||    
T  7918206 tgacacgacactgacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 25361954 - 25361896
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattat 125  Q
    |||| ||||||||||| | ||||||||||| ||||||||||||| |||| |||||||||    
T  25361954 acaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 27471540 - 27471617
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| |||| ||||||||||| || | ||||| || |||| |||||| ||||||||||||| |||| |||||||||||    
T  27471540 gacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattatta 27471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 47989584 - 47989504
Alignment:
Q  48 cagacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattattat 128  Q
    ||||||||||| || ||| |||| ||||||||||  | || | |||||| ||||||||||||| |||||| ||||||||||    
T  47989584 cagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattattat 47989504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 1486705 - 1486760
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||  | || |||||||| ||||||||||||| ||||||||||||||||    
T  1486705 gacacgacaccgacacttataattacactgaattatgtgattttttcaaattatta 1486760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 9449024 - 9449059
Alignment:
Q  92 aattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9449024 aattatactgaattatgtgattttttcaaattatta 9449059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 44482311 - 44482240
Alignment:
Q  54 tgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattat 125  Q
    ||||| || ||| |||| ||||||||||  | ||||||||||| ||||||||||||| |||| |||||||||    
T  44482311 tgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 398778 - 398816
Alignment:
Q  89 tataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  398778 tataattacactgaattatgtgattttttcaaattatta 398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 16164280 - 16164366
Alignment:
Q  41 ctggtgccagacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| | |||| ||||||  ||||||||  |||||||| | | ||||||||||| | | ||||||||| ||||||||||||||||    
T  16164280 ctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 1864890 - 1864931
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  1864890 acatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 31694687 - 31694763
Alignment:
Q  53 atgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtg--gttttttcaaattatta 127  Q
    ||||||||| ||| |||| ||||||||||  | || | ||||||||||||||||||||   ||||||||||||||||    
T  31694687 atgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattatta 31694763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 40181920 - 40181879
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 113343 - 113307
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  113343 taattacactgaattatgtgattttttcaaattatta 113307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 5898277 - 5898317
Alignment:
Q  87 catataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||| ||||||||||||| |||||||| |||||||    
T  5898277 catataattacactgaattatgtgattttttcagattatta 5898317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 9828112 - 9828052
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||||||  | ||||| ||||| ||||||||||||| |||| |||||||||||    
T  9828112 acacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 12715148 - 12715188
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattat 107  Q
    |||| ||||||||||||| ||||||||||||||| ||||||    
T  12715148 acaccgacacgacactaatacatataattatacttaattat 12715188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 24577201 - 24577237
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  24577201 taattacactgaattatgtgattttttcaaattatta 24577237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 40258948 - 40258984
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  40258948 taattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 11803344 - 11803267
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||| |||||||||||  |||| |||| || ||||||||||| ||||||||||||| |||| | |||||||||    
T  11803344 gacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 11927083 - 11927137
Alignment:
Q  73 acacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||  | ||||||||||| ||||||||||||| |||| |||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 29776086 - 29776044
Alignment:
Q  85 gacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||||||||||||||| ||| |||| |||||||||||    
T  29776086 gacatataattatactgaattacgtgattttctcaaattatta 29776044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 34897134 - 34897093
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  34897134 acatataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 4948696 - 4948660
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  4948696 taattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 22652020 - 22651984
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  22652020 taattatattgaattatgtgattttttcaaattatta 22651984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 24362193 - 24362253
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||||| | | ||||||||||| ||||||||||||| || | |||||||||||    
T  24362193 acaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattatta 24362253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 25566885 - 25566849
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  25566885 taattacactgaattatgtgattttttcaaattatta 25566849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 29510319 - 29510355
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  29510319 taattatactgaattttgtgattttttcaaattatta 29510355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 35519798 - 35519858
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||||||| | ||||| | ||||||  ||||||||| ||||||||||||||||    
T  35519798 acaccgacacgacactgacacatacatttatacaaaattatgtgattttttcaaattatta 35519858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 263363 - 263423
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||||||| | || |||||||| |||||||||||||||||| |||||||||||    
T  263363 acaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattatta 263423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 11313796 - 11313851
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||||| ||||||||||| ||| ||||||||| |||| |||||||||||    
T  11313796 gacacgacactaacacatataattacactaaattatgtgattttctcaaattatta 11313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 25948883 - 25948938
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||| || || |||||||| ||||||||||||| ||||||||||||||||    
T  25948883 gacacgacaccaacacttataattacactgaattatgtgattttttcaaattatta 25948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 1550209 - 1550148
Alignment:
Q  66 aacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||||||||| | || |||||||| |||||||  |||| ||||||||||||||||    
T  1550209 aacactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattatta 1550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 4987265 - 4987342
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| |||| || |||||||| |||||| ||| || || | |||||| ||||||||||||| ||||||||||||||||    
T  4987265 gacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattatta 4987342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 7928499 - 7928458
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  7928499 acatataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 16789097 - 16789020
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||  | ||| ||||||||||||||| || || |||||||| |||||||||| || |||||| |||||||||    
T  16789097 gacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 21257001 - 21257037
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||||||||||||| ||||||||||||||||    
T  21257001 taattatactgaattatgtgattttttcaaattatta 21257037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  73 acacgacactaagacatataattatactgaattatgtggttttttcaaatta 124  Q
    ||||||||| || ||||||||||| ||| ||||||||| |||||||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 1438853 - 1438816
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaatt 123  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  1438853 acatataattatactgaattatgtgattttctcaaatt 1438816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 12704056 - 12704015
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattatta 12704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 29508493 - 29508452
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| |||||||||| || ||||||||||||||||    
T  29508493 acatataattacactgaattatatgattttttcaaattatta 29508452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 14209181 - 14209121
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||||||| | || | |||||| ||||||||||||| |||||| |||||||||    
T  14209181 acaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattatta 14209121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 16192741 - 16192801
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| |||||||||  || ||||||||||| ||||||||||||  |||| |||||||||||    
T  16192741 acaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 26508154 - 26508118
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  26508154 taattacactgaattatgtgattttttcaaattatta 26508118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 28918045 - 28918009
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  28918045 taattacactgaattatgtgattttttcaaattatta 28918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 34910361 - 34910325
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  34910361 taattacactgaattatgtgattttttcaaattatta 34910325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 9996891 - 9996849
Alignment:
Q  84 agacatataattatactgaattatgtggttttttcaaattatt 126  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  9996891 agacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 903994 - 903930
Alignment:
Q  63 tccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||| || |||| ||| | ||||||||||| ||||||||||||| |||| |||||||||||    
T  903994 tccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 23293001 - 23293037
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23293001 taattatactgaattatgtgattttttcaaattatta 23293037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 15029824 - 15029773
Alignment:
Q  76 cgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| || ||||||||||| ||||||||||||| | ||||||||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattatta 15029773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 54580036 - 54580074
Alignment:
Q  89 tataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  54580036 tataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 22440610 - 22440651
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  22440610 acatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 36635373 - 36635332
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  36635373 acatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 11596347 - 11596403
Alignment:
Q  71 tgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||||  | || | |||||| ||||||||||||| ||||||||||||||||    
T  11596347 tgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattatta 11596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 28964263 - 28964299
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  28964263 taattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 29205488 - 29205452
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  29205488 taattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 40179647 - 40179687
Alignment:
Q  87 catataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||| ||||||||||||| |||||||||| |||||    
T  40179647 catataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 51701326 - 51701266
Alignment:
Q  67 acactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| ||||||||||||| || | |||||| ||| ||||||||  ||||||||||||||||    
T  51701326 acaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattatta 51701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 44499 - 44572
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaatt 123  Q
    |||| ||||||| |||||||| ||||||| ||  | ||||||||||| ||||||||||||| |||| |||||||    
T  44499 gacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatt 44572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 28677958 - 28677917
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattatta 28677917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 12668402 - 12668474
Alignment:
Q  55 gtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||| |||||||| || ||||||||||  | || |||||||| ||||||||||||  ||||||||||||||||    
T  12668402 gtgtcgtatccaataccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 32199141 - 32199191
Alignment:
Q  77 gacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| | ||||||||||||||| ||||||||| |||| |||||||||||    
T  32199141 gacactgatacatataattatacttaattatgtgattttatcaaattatta 32199191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 17776659 - 17776594
Alignment:
Q  63 tccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattattat 128  Q
    |||||||| |||  |||||| | ||||||||||| ||||| |||||||||||| | ||||||||||    
T  17776659 tccaacaccgacttgacactgacacatataattacactgacttatgtggttttcttaaattattat 17776594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 21616811 - 21616770
Alignment:
Q  86 acatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  21616811 acatataattacactgaattatgtgattttctcaaattatta 21616770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 36756318 - 36756395
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    |||||||||||| | | ||||| |||||||||  | || |||||||| ||||||||||||  ||| ||||||||||||    
T  36756318 gacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaattatgttatttcttcaaattatta 36756395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 18622670 - 18622614
Alignment:
Q  71 tgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| || || |||||||| ||||||||||||| |||| | |||||||||    
T  18622670 tgacacgacaccaacacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 30404865 - 30404901
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  30404865 taattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 30717545 - 30717581
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  30717545 taattacactgaattatgtgattttttcaaattatta 30717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 44860392 - 44860328
Alignment:
Q  63 tccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||  |||||||||  | ||||||||||| ||||||||||| | |||| |||||||||||    
T  44860392 tccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 20235 - 20180
Alignment:
Q  72 gacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||||| | || | |||||| ||||||||||||| ||||||||||||||||    
T  20235 gacacgacactgacacttgtaattacactgaattatgtgattttttcaaattatta 20180  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 3823 - 3900
Alignment:
Q  50 gacatgtgttgtatccaacactgacacgacactaagacatataattatactgaattatgtggttttttcaaattatta 127  Q
    ||||||||| || ||| ||||  |||||||||| | || | |||||| ||||||||||||| |||||| |||||||||    
T  3823 gacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 14574 - 14538
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattatta 14538  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 51855 - 51819
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  51855 taattacactgaattatgtgattttttcaaattatta 51819  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 46726 - 46690
Alignment:
Q  91 taattatactgaattatgtggttttttcaaattatta 127  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  46726 taattacactgaattatgtgattttttcaaattatta 46690  T

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