View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10965_low_23 (Length: 252)
Name: NF10965_low_23
Description: NF10965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10965_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 6388820 - 6388595
Alignment:
| Q |
18 |
attagacgcataagcttcttgtttattcctttatttcagctttacaaggaaaagacatgaaaaagtttatttgaaagtctggctataaatatggccaagt |
117 |
Q |
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| T |
6388820 |
attagacgcataagcttcttgtttattcctttatttcagctttacaaggaaaagacatgaaaaagtttatttgaaagtctggctataaatatggccaagt |
6388721 |
T |
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| Q |
118 |
ccataggtttctacctcatgaagtgaaaaacttaactactatacctcttttgaagctttgaggattcaacttctaaactcataacatgtcattttccggt |
217 |
Q |
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| T |
6388720 |
ccataggtttctacctcatgaagtgaaaaacttaactactatacctcttttgaagctttgaggattcaatttctaaactcataacatgtcattttccggt |
6388621 |
T |
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| Q |
218 |
ctcaaaaacttcttccacaggttctg |
243 |
Q |
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||||||||||||||||| |||||||| |
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| T |
6388620 |
ctcaaaaacttcttccagaggttctg |
6388595 |
T |
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