View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10967_high_5 (Length: 298)
Name: NF10967_high_5
Description: NF10967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10967_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 26975214 - 26974928
Alignment:
| Q |
1 |
ttttcttctctctttcttctcacacattcatagaatttgtcacatattctagaacaactcaacagttgaannnnnnnnattctcttttataacaatgagg |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
26975214 |
ttttattctctctttcttctcacacattcatagaatttgtcacatattctagaacaactcaacagttgaattttttttattctcttttataacaatgagg |
26975115 |
T |
|
| Q |
101 |
gcctaagcccacaagggccacaacagttgaaaatttt-gttcactactagctatgtccctttacataattgaaggggcggcagaagaaacatcttacttc |
199 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26975114 |
gcctaagcccacaagggccacaacagttgaaaatttttgttcactactagccatgtccctttacataattgaaggggcggcagaagaaacatcttacttc |
26975015 |
T |
|
| Q |
200 |
atcatatttgacatattactgtattttttcctaaataaggccaattttagtgttcnnnnnnngtcaactatctctacaccattattcat |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
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| T |
26975014 |
atcatatttgacatattactgtattttttcctaaataaggccaattttagtgttctttttttgtcaacta--tctacaccattattcat |
26974928 |
T |
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