View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10968_low_11 (Length: 239)
Name: NF10968_low_11
Description: NF10968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10968_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 39042572 - 39042348
Alignment:
| Q |
1 |
caagggaagattagataaagtgatagatcatagagtcactccacatacttagaaagggtcccactcaatgtatggggcaattttaaattggaagatatat |
100 |
Q |
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| T |
39042572 |
caagggaagattagataaagtgatagatcatagagtcactccacatacttagaaagggtcccactcaatgtatggggcaattttaaattggaagatatat |
39042473 |
T |
|
| Q |
101 |
gatat--ttcttgcattaagaaatggttgtttacataagcgtgacctgatgtactaaagttggtgtacttgtgcaacacttttggccaaatgaaaccaat |
198 |
Q |
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| T |
39042472 |
gatatatttcttgcattaagaaatggttgtttacataagcgtaacctgatgtagtaaagttggtgtacttgtgcaacacttttggccaaatgaaaccaat |
39042373 |
T |
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| Q |
199 |
aaaaaatgatatggggagaaccact |
223 |
Q |
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||||||||||||||||||||||||| |
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| T |
39042372 |
aaaaaatgatatggggagaaccact |
39042348 |
T |
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