View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10968_low_9 (Length: 253)
Name: NF10968_low_9
Description: NF10968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10968_low_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 4856171 - 4855936
Alignment:
| Q |
18 |
atgtgttgataaaatgctattgagaacacattgcaatgattaggtgtcatgtattgttgaaatggtttctcattgtttgtagttaaaatactagagaaac |
117 |
Q |
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| T |
4856171 |
atgtgttgataaaatgctattgagaacacattgcaatgattaggtgtcatgtattgttgaaatggtttctcattgtttgtagttaaaatactagagaaac |
4856072 |
T |
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| Q |
118 |
caaacatatgatatatagttatgaggagaagaagctacaactattagatatttgaataaccgttctaatgcaagtaaagagtcttttacataggtaatgt |
217 |
Q |
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| T |
4856071 |
caaacatatgatatatagttatgaggagaagaagctacaactattagatatttgaataaccgttctaatgcaagtaaagagtcttttacataggtaatgt |
4855972 |
T |
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| Q |
218 |
ctaagacaaacaaagaagaaaaaaggtgcgaatacc |
253 |
Q |
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| T |
4855971 |
ctaagacaaacaaagaagaaaaaaggtgcaaatacc |
4855936 |
T |
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