View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1096_low_14 (Length: 320)
Name: NF1096_low_14
Description: NF1096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1096_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 99 - 276
Target Start/End: Complemental strand, 41733527 - 41733349
Alignment:
| Q |
99 |
gggtgtacctcaagaataattataacatgtttctataatgttaatacacatgatatacactattttgactctacattatttttt-attttggggttttgt |
197 |
Q |
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| T |
41733527 |
gggtgtacctcaagaataattataacatgtttctataatgttaatacacatgatatacactattttgactctacattatttttttattttggggttttgt |
41733428 |
T |
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| Q |
198 |
tagagcatatctaatagtatcatgagccatcaatttttatctcttctgaagattgctcacgtatcgtgtaataactacc |
276 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41733427 |
tagagcatatctaatagtatcacgagccatcaatttttatctcttctgaagattgctcacgtatcgtgtaataactacc |
41733349 |
T |
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