View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10970_high_18 (Length: 320)
Name: NF10970_high_18
Description: NF10970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10970_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 18 - 316
Target Start/End: Original strand, 29648924 - 29649223
Alignment:
| Q |
18 |
tgaaccggcttgtccggttctaaaaacactgatatgaagacaatatggtgcaatgaaaacccttttacttacctaagcacagggtagacagtttccatgt |
117 |
Q |
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| T |
29648924 |
tgaaccggcttgtccggttctaaaaacactgatatgaagacaatatggtgcaacgaaaacccttttacttacctaagcacagggtagacagtttccatgt |
29649023 |
T |
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| Q |
118 |
agagtgaattttggtgtcttttgtacagtccagtaagatgagccattaaaacatatgcaccaaaaagtgcccaaaagcatccagtaaatagtcctgaatt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29649024 |
agagtgaattttggtgtcttttgtacagtccagtaagatgagccattaaaacatatgcaccaaaaagtgcccaaaagcatccagtaaatagtcctgaatt |
29649123 |
T |
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| Q |
218 |
tatttggaagattcagttaattttatgagtaacttgctaaggaatttacactcatatcaaat-nnnnnnntcaaacatttttcatatataatgagttctt |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
29649124 |
tatttggaagattcagttaattttatgagtaacttgctaaggaatttacactcatatcaaataaaaaaaatcaaacatttttcatatataatgagttctt |
29649223 |
T |
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