View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10970_high_30 (Length: 249)
Name: NF10970_high_30
Description: NF10970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10970_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 38100988 - 38101225
Alignment:
| Q |
1 |
tgtttttgttgccccaagccaaaataagaagccaatgttgccatctgcccataaatataatagtgttaagaacttgaaattgtgag-aattatgaatcac |
99 |
Q |
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| T |
38100988 |
tgtttttgttgccccaagccaaaataagaagccaatgttgccatctgcccataaatataatagtgttaagaacttgaaattgtgaggaattatgaatcac |
38101087 |
T |
|
| Q |
100 |
ttgcttctatatattcttgatacttgacataccttcatattaccagctcttcttccaaatttctcagttaggacccctaaagaatcgatgattccaactg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38101088 |
ttgcttctatatattcttgatacttgacataccttcatattaccagctcttcttccaaatttctcagttaggacccctaaagaatcgatgattccaactg |
38101187 |
T |
|
| Q |
200 |
gtacaggtgctggcctattgatatcatcaaaagcctct |
237 |
Q |
| |
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||||||||||||||||||||||| |||||||||||||| |
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| T |
38101188 |
gtacaggtgctggcctattgataccatcaaaagcctct |
38101225 |
T |
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