View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10970_low_2 (Length: 714)

Name: NF10970_low_2
Description: NF10970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10970_low_2
NF10970_low_2
[»] chr2 (47 HSPs)
chr2 (364-696)||(31657910-31658233)
chr2 (55-193)||(40533250-40533388)
chr2 (51-193)||(2317104-2317246)
chr2 (55-193)||(37725550-37725688)
chr2 (55-192)||(36947752-36947889)
chr2 (55-192)||(490004-490140)
chr2 (58-194)||(1859925-1860061)
chr2 (58-194)||(45555380-45555516)
chr2 (55-194)||(13568482-13568621)
chr2 (55-192)||(3724211-3724348)
chr2 (55-192)||(35292510-35292646)
chr2 (58-193)||(6657442-6657577)
chr2 (58-193)||(18009227-18009362)
chr2 (58-195)||(7504296-7504434)
chr2 (58-192)||(41839654-41839788)
chr2 (55-192)||(10711277-10711414)
chr2 (55-191)||(16815120-16815256)
chr2 (55-172)||(36192240-36192357)
chr2 (58-194)||(39879192-39879328)
chr2 (51-190)||(5085105-5085243)
chr2 (58-192)||(21836336-21836473)
chr2 (58-194)||(21425210-21425346)
chr2 (58-194)||(26738030-26738166)
chr2 (58-189)||(33424005-33424137)
chr2 (58-175)||(28394085-28394204)
chr2 (58-194)||(33716567-33716703)
chr2 (55-193)||(18576570-18576719)
chr2 (51-189)||(44068052-44068189)
chr2 (117-191)||(16854339-16854413)
chr2 (58-192)||(14819916-14820050)
chr2 (314-362)||(31658355-31658403)
chr2 (1-50)||(31658493-31658542)
chr2 (58-192)||(36049737-36049873)
chr2 (129-192)||(39620191-39620254)
chr2 (282-315)||(31658230-31658263)
chr2 (127-195)||(11088213-11088280)
chr2 (409-469)||(12777809-12777868)
chr2 (129-192)||(11227627-11227689)
chr2 (133-192)||(15362817-15362875)
chr2 (233-268)||(31658304-31658339)
chr2 (133-192)||(41555773-41555831)
chr2 (81-195)||(42641146-42641260)
chr2 (146-192)||(45157530-45157576)
chr2 (129-194)||(58918-58982)
chr2 (147-192)||(1580603-1580648)
chr2 (129-190)||(6884161-6884221)
chr2 (128-193)||(15176341-15176405)
[»] chr6 (28 HSPs)
chr6 (55-196)||(32519002-32519143)
chr6 (55-190)||(16989382-16989517)
chr6 (51-195)||(18870919-18871064)
chr6 (55-191)||(35225100-35225236)
chr6 (55-194)||(26810775-26810914)
chr6 (51-192)||(1338853-1338995)
chr6 (58-193)||(9226199-9226334)
chr6 (55-193)||(6016074-6016212)
chr6 (55-164)||(33954480-33954588)
chr6 (58-165)||(27719277-27719384)
chr6 (58-192)||(24025531-24025665)
chr6 (58-193)||(34315397-34315530)
chr6 (58-153)||(34969491-34969586)
chr6 (58-161)||(29639007-29639110)
chr6 (370-494)||(7325125-7325252)
chr6 (78-194)||(21181137-21181253)
chr6 (51-189)||(6974965-6975103)
chr6 (133-193)||(1705605-1705664)
chr6 (129-193)||(32834118-32834181)
chr6 (565-649)||(4844173-4844259)
chr6 (147-192)||(8549916-8549961)
chr6 (117-192)||(9661752-9661828)
chr6 (78-192)||(7344607-7344722)
chr6 (58-105)||(11273689-11273736)
chr6 (58-105)||(14715539-14715586)
chr6 (58-105)||(24151398-24151445)
chr6 (133-192)||(24248804-24248862)
chr6 (140-193)||(15383559-15383611)
[»] chr1 (76 HSPs)
chr1 (51-192)||(43224911-43225052)
chr1 (55-193)||(7426930-7427068)
chr1 (55-195)||(14190887-14191027)
chr1 (55-194)||(3150455-3150594)
chr1 (58-197)||(17376350-17376489)
chr1 (58-193)||(25493497-25493632)
chr1 (54-193)||(46872368-46872507)
chr1 (58-190)||(8569249-8569381)
chr1 (51-183)||(52273985-52274117)
chr1 (58-192)||(9223127-9223262)
chr1 (55-194)||(33829135-33829274)
chr1 (55-194)||(33838692-33838831)
chr1 (58-192)||(27801810-27801944)
chr1 (55-192)||(10061157-10061294)
chr1 (55-190)||(39852959-39853094)
chr1 (58-193)||(48480849-48480984)
chr1 (58-192)||(29171165-29171299)
chr1 (55-189)||(44647515-44647649)
chr1 (51-190)||(47860992-47861131)
chr1 (58-192)||(5057199-5057333)
chr1 (58-192)||(24248075-24248209)
chr1 (55-192)||(27038543-27038680)
chr1 (55-193)||(37765523-37765662)
chr1 (58-193)||(40850022-40850155)
chr1 (58-192)||(48868336-48868470)
chr1 (58-194)||(9260089-9260225)
chr1 (58-189)||(41321008-41321139)
chr1 (58-192)||(33234327-33234461)
chr1 (58-193)||(50502617-50502756)
chr1 (58-192)||(2684011-2684144)
chr1 (58-194)||(28095021-28095156)
chr1 (55-169)||(31571239-31571353)
chr1 (58-190)||(10635669-10635802)
chr1 (58-192)||(14131627-14131756)
chr1 (58-194)||(49739141-49739277)
chr1 (58-191)||(20280223-20280355)
chr1 (58-190)||(22821249-22821382)
chr1 (55-193)||(52079440-52079580)
chr1 (78-193)||(1658833-1658948)
chr1 (58-140)||(31016140-31016222)
chr1 (132-193)||(49685984-49686045)
chr1 (58-171)||(41550419-41550532)
chr1 (127-195)||(34256450-34256517)
chr1 (118-192)||(31075942-31076017)
chr1 (58-108)||(33771917-33771967)
chr1 (59-137)||(41757137-41757215)
chr1 (129-193)||(9166872-9166935)
chr1 (133-191)||(38207879-38207936)
chr1 (147-192)||(477796-477841)
chr1 (129-190)||(11778980-11779040)
chr1 (129-194)||(16482574-16482638)
chr1 (149-198)||(21072770-21072819)
chr1 (127-192)||(44978869-44978933)
chr1 (133-193)||(7435512-7435571)
chr1 (129-197)||(35305146-35305213)
chr1 (147-195)||(35874300-35874348)
chr1 (90-182)||(50631897-50631989)
chr1 (129-189)||(51781448-51781507)
chr1 (129-192)||(922186-922248)
chr1 (58-105)||(5957531-5957578)
chr1 (58-192)||(12227121-12227256)
chr1 (58-105)||(14077416-14077463)
chr1 (147-194)||(17554179-17554226)
chr1 (146-193)||(24230931-24230978)
chr1 (129-192)||(27295058-27295120)
chr1 (129-196)||(28493806-28493872)
chr1 (58-105)||(50534157-50534204)
chr1 (143-193)||(12178605-12178655)
chr1 (565-649)||(13941349-13941435)
chr1 (51-105)||(39084980-39085034)
chr1 (55-85)||(49289499-49289529)
chr1 (145-195)||(51056194-51056244)
chr1 (129-190)||(2247069-2247129)
chr1 (609-646)||(26321749-26321786)
chr1 (51-108)||(48313574-48313631)
chr1 (129-190)||(51184044-51184104)
[»] chr5 (53 HSPs)
chr5 (55-193)||(25684072-25684210)
chr5 (58-194)||(2148399-2148535)
chr5 (55-193)||(39540989-39541127)
chr5 (55-192)||(10453280-10453417)
chr5 (55-192)||(15725945-15726082)
chr5 (55-192)||(37314107-37314244)
chr5 (55-189)||(23189337-23189471)
chr5 (55-189)||(40340430-40340565)
chr5 (55-197)||(31236859-31237001)
chr5 (55-189)||(42534663-42534797)
chr5 (58-190)||(33001720-33001852)
chr5 (55-190)||(16729726-16729861)
chr5 (59-193)||(10688392-10688526)
chr5 (55-192)||(41631218-41631355)
chr5 (58-193)||(22798340-22798478)
chr5 (51-193)||(3881831-3881972)
chr5 (55-189)||(8068589-8068722)
chr5 (58-192)||(13589137-13589271)
chr5 (58-193)||(28770219-28770352)
chr5 (58-191)||(9530363-9530496)
chr5 (58-192)||(19125912-19126046)
chr5 (55-193)||(4094657-4094795)
chr5 (58-192)||(32624176-32624310)
chr5 (60-192)||(22279491-22279622)
chr5 (58-153)||(43411789-43411884)
chr5 (58-178)||(32063798-32063919)
chr5 (58-192)||(11758612-11758752)
chr5 (58-192)||(37963257-37963391)
chr5 (58-194)||(34859707-34859841)
chr5 (129-192)||(28332120-28332183)
chr5 (129-196)||(34302642-34302708)
chr5 (63-189)||(23408255-23408381)
chr5 (152-194)||(27353419-27353461)
chr5 (129-194)||(4618056-4618120)
chr5 (133-194)||(5204967-5205027)
chr5 (129-190)||(6560828-6560888)
chr5 (133-194)||(40756891-40756951)
chr5 (118-189)||(43393088-43393159)
chr5 (133-192)||(5141017-5141075)
chr5 (58-105)||(6335477-6335524)
chr5 (58-105)||(12336300-12336347)
chr5 (58-105)||(13593554-13593601)
chr5 (147-194)||(32993688-32993735)
chr5 (129-192)||(43237697-43237759)
chr5 (51-105)||(2011324-2011378)
chr5 (569-647)||(6447463-6447541)
chr5 (51-105)||(9499314-9499368)
chr5 (51-105)||(9499474-9499528)
chr5 (129-195)||(27116459-27116524)
chr5 (129-194)||(9589207-9589271)
chr5 (129-190)||(21605650-21605710)
chr5 (147-192)||(36339208-36339253)
chr5 (127-192)||(36409906-36409969)
[»] chr4 (53 HSPs)
chr4 (55-193)||(36569647-36569785)
chr4 (55-194)||(21514987-21515126)
chr4 (55-193)||(45629107-45629245)
chr4 (55-194)||(44998409-44998547)
chr4 (55-193)||(10779261-10779399)
chr4 (55-192)||(24291978-24292114)
chr4 (58-194)||(33612521-33612657)
chr4 (55-193)||(16004803-16004941)
chr4 (58-192)||(48549939-48550073)
chr4 (58-189)||(23639508-23639639)
chr4 (58-192)||(42244810-42244944)
chr4 (55-194)||(46222262-46222403)
chr4 (57-190)||(46633875-46634009)
chr4 (55-194)||(27967507-27967647)
chr4 (58-194)||(46630918-46631055)
chr4 (58-194)||(54499573-54499708)
chr4 (55-194)||(38955312-38955453)
chr4 (58-190)||(27635741-27635873)
chr4 (58-194)||(52257130-52257266)
chr4 (58-192)||(54505838-54505973)
chr4 (51-194)||(42680856-42680999)
chr4 (51-192)||(56016796-56016937)
chr4 (58-192)||(2526171-2526305)
chr4 (123-189)||(23645231-23645297)
chr4 (55-105)||(45754468-45754518)
chr4 (58-108)||(42080600-42080650)
chr4 (144-193)||(10972959-10973008)
chr4 (133-194)||(12756000-12756060)
chr4 (117-192)||(13548735-13548810)
chr4 (569-647)||(15640426-15640504)
chr4 (78-168)||(16601633-16601724)
chr4 (129-195)||(36091056-36091121)
chr4 (133-190)||(44957267-44957323)
chr4 (129-193)||(31681336-31681399)
chr4 (117-192)||(53936843-53936919)
chr4 (129-192)||(3716325-3716387)
chr4 (129-192)||(18425462-18425524)
chr4 (129-192)||(30342825-30342887)
chr4 (58-109)||(39412442-39412493)
chr4 (133-192)||(40438983-40439041)
chr4 (147-194)||(50607682-50607729)
chr4 (129-195)||(1414443-1414508)
chr4 (147-189)||(23059131-23059173)
chr4 (133-195)||(39103887-39103948)
chr4 (127-193)||(46216114-46216179)
chr4 (147-193)||(48647383-48647429)
chr4 (569-647)||(56546432-56546510)
chr4 (118-194)||(19842436-19842512)
chr4 (150-195)||(24535850-24535895)
chr4 (144-193)||(33491954-33492003)
chr4 (129-194)||(34280573-34280637)
chr4 (147-192)||(50383691-50383736)
chr4 (129-194)||(52324311-52324375)
[»] chr7 (46 HSPs)
chr7 (55-192)||(24505123-24505260)
chr7 (58-193)||(15090667-15090802)
chr7 (55-192)||(47219956-47220092)
chr7 (51-194)||(1282183-1282326)
chr7 (51-193)||(45197070-45197212)
chr7 (60-192)||(3061902-3062034)
chr7 (58-192)||(25866905-25867039)
chr7 (58-192)||(32186698-32186832)
chr7 (58-192)||(41715414-41715548)
chr7 (58-193)||(2038368-2038503)
chr7 (55-194)||(42039300-42039439)
chr7 (55-193)||(18922575-18922713)
chr7 (58-200)||(42902659-42902801)
chr7 (58-192)||(47069234-47069368)
chr7 (58-193)||(40947246-40947381)
chr7 (58-192)||(27130816-27130950)
chr7 (58-195)||(7574387-7574524)
chr7 (60-192)||(17334739-17334870)
chr7 (55-139)||(9923123-9923207)
chr7 (58-190)||(33704821-33704952)
chr7 (58-153)||(39444004-39444099)
chr7 (63-195)||(13806359-13806491)
chr7 (586-643)||(20947812-20947869)
chr7 (117-192)||(9682357-9682432)
chr7 (406-466)||(24454174-24454234)
chr7 (63-193)||(1343018-1343150)
chr7 (147-192)||(6791799-6791844)
chr7 (124-197)||(31743295-31743367)
chr7 (133-194)||(31759991-31760051)
chr7 (129-193)||(41913438-41913501)
chr7 (147-195)||(41968784-41968832)
chr7 (129-193)||(45857818-45857881)
chr7 (147-203)||(47369581-47369637)
chr7 (129-192)||(18990091-18990153)
chr7 (133-192)||(21920040-21920098)
chr7 (58-105)||(27427405-27427452)
chr7 (565-649)||(32309127-32309213)
chr7 (147-190)||(36533409-36533452)
chr7 (129-192)||(44964165-44964227)
chr7 (146-192)||(17340794-17340839)
chr7 (147-193)||(41771770-41771816)
chr7 (147-189)||(46291461-46291503)
chr7 (133-194)||(17833929-17833989)
chr7 (141-194)||(27800384-27800436)
chr7 (129-194)||(30624067-30624131)
chr7 (58-151)||(31311386-31311480)
[»] chr3 (63 HSPs)
chr3 (55-193)||(33830529-33830667)
chr3 (58-192)||(45927220-45927354)
chr3 (55-194)||(2667482-2667621)
chr3 (55-194)||(52782429-52782568)
chr3 (55-196)||(53186000-53186141)
chr3 (51-193)||(9322699-9322841)
chr3 (55-197)||(44500385-44500527)
chr3 (55-193)||(44962601-44962739)
chr3 (55-192)||(37567218-37567355)
chr3 (58-195)||(54008902-54009039)
chr3 (57-193)||(48925683-48925819)
chr3 (58-192)||(32719985-32720119)
chr3 (58-194)||(1326599-1326735)
chr3 (55-206)||(49951195-49951346)
chr3 (58-193)||(55365647-55365783)
chr3 (58-192)||(48389031-48389166)
chr3 (55-193)||(346689-346827)
chr3 (58-192)||(50560634-50560768)
chr3 (55-179)||(53376604-53376728)
chr3 (58-195)||(26409893-26410029)
chr3 (51-163)||(14460210-14460322)
chr3 (58-192)||(7157311-7157445)
chr3 (51-153)||(36019682-36019784)
chr3 (58-190)||(50465473-50465606)
chr3 (55-153)||(48990351-48990449)
chr3 (117-194)||(52788755-52788832)
chr3 (58-193)||(35320633-35320770)
chr3 (117-193)||(54011141-54011217)
chr3 (55-153)||(51235558-51235658)
chr3 (370-494)||(21334607-21334734)
chr3 (51-193)||(42622608-42622752)
chr3 (58-109)||(7347173-7347224)
chr3 (51-108)||(881808-881865)
chr3 (58-200)||(23043625-23043766)
chr3 (117-193)||(26885302-26885379)
chr3 (129-192)||(38785426-38785488)
chr3 (129-193)||(11140246-11140309)
chr3 (118-189)||(31479559-31479630)
chr3 (129-192)||(42364271-42364333)
chr3 (129-195)||(876566-876631)
chr3 (569-647)||(36331709-36331787)
chr3 (117-193)||(9506902-9506979)
chr3 (117-193)||(9514877-9514954)
chr3 (117-193)||(25482574-25482651)
chr3 (129-194)||(29491661-29491726)
chr3 (129-194)||(42622193-42622258)
chr3 (129-193)||(42067578-42067641)
chr3 (140-192)||(43715103-43715154)
chr3 (127-195)||(52776795-52776862)
chr3 (400-470)||(5328331-5328402)
chr3 (141-192)||(14998506-14998556)
chr3 (129-192)||(19547489-19547551)
chr3 (129-192)||(25592350-25592412)
chr3 (147-201)||(7352529-7352583)
chr3 (51-105)||(20199433-20199487)
chr3 (129-195)||(29347604-29347669)
chr3 (51-105)||(47175553-47175607)
chr3 (143-192)||(23795788-23795837)
chr3 (146-191)||(24169956-24170001)
chr3 (569-649)||(26583135-26583218)
chr3 (147-192)||(26849924-26849969)
chr3 (129-190)||(40477759-40477820)
chr3 (147-192)||(46671337-46671382)
[»] chr8 (58 HSPs)
chr8 (55-192)||(28897173-28897310)
chr8 (55-194)||(45393716-45393855)
chr8 (55-189)||(37766572-37766706)
chr8 (57-193)||(21835430-21835566)
chr8 (58-193)||(37404875-37405010)
chr8 (58-192)||(1426601-1426735)
chr8 (51-189)||(36835345-36835483)
chr8 (58-190)||(464250-464383)
chr8 (58-190)||(12266349-12266481)
chr8 (55-194)||(45401146-45401285)
chr8 (58-192)||(196338-196471)
chr8 (58-192)||(311175-311308)
chr8 (58-192)||(29039885-29040019)
chr8 (55-202)||(38971453-38971601)
chr8 (55-202)||(39002551-39002699)
chr8 (55-164)||(7223511-7223620)
chr8 (51-192)||(38803434-38803575)
chr8 (58-196)||(27101084-27101223)
chr8 (55-170)||(43182995-43183109)
chr8 (55-153)||(38627026-38627124)
chr8 (58-192)||(3052799-3052933)
chr8 (123-192)||(29565687-29565756)
chr8 (58-190)||(41571982-41572113)
chr8 (126-197)||(14914154-14914225)
chr8 (58-169)||(18844432-18844543)
chr8 (561-622)||(4954991-4955052)
chr8 (55-96)||(14914114-14914155)
chr8 (147-195)||(26988749-26988797)
chr8 (127-193)||(19718693-19718758)
chr8 (129-190)||(1043060-1043121)
chr8 (141-193)||(12801106-12801157)
chr8 (129-193)||(15726234-15726297)
chr8 (129-193)||(29454553-29454617)
chr8 (129-193)||(29773444-29773507)
chr8 (129-192)||(2273010-2273072)
chr8 (58-109)||(5982459-5982510)
chr8 (129-192)||(28090192-28090254)
chr8 (58-105)||(34058103-34058150)
chr8 (147-202)||(37676299-37676354)
chr8 (127-194)||(40154487-40154552)
chr8 (58-105)||(43331830-43331877)
chr8 (58-105)||(44309652-44309699)
chr8 (129-195)||(16323556-16323621)
chr8 (127-193)||(17096624-17096688)
chr8 (147-193)||(26522328-26522374)
chr8 (130-192)||(34047762-34047823)
chr8 (51-105)||(41674570-41674624)
chr8 (130-192)||(43049537-43049598)
chr8 (127-192)||(2261029-2261094)
chr8 (127-192)||(5215663-5215727)
chr8 (397-469)||(5985812-5985885)
chr8 (129-194)||(6631249-6631314)
chr8 (129-194)||(6800116-6800180)
chr8 (129-194)||(17642072-17642136)
chr8 (129-194)||(23286563-23286627)
chr8 (127-192)||(32071586-32071650)
chr8 (565-646)||(33982220-33982301)
chr8 (129-194)||(37511086-37511150)
[»] scaffold0022 (1 HSPs)
scaffold0022 (55-195)||(166687-166827)
[»] scaffold0121 (1 HSPs)
scaffold0121 (58-193)||(13602-13737)
[»] scaffold1999 (1 HSPs)
scaffold1999 (55-192)||(1003-1140)
[»] scaffold0239 (1 HSPs)
scaffold0239 (60-192)||(15380-15512)
[»] scaffold0493 (1 HSPs)
scaffold0493 (55-194)||(1379-1519)
[»] scaffold0005 (1 HSPs)
scaffold0005 (55-192)||(291623-291760)
[»] scaffold0194 (1 HSPs)
scaffold0194 (55-192)||(17764-17900)
[»] scaffold0349 (1 HSPs)
scaffold0349 (58-165)||(8699-8806)
[»] scaffold0017 (1 HSPs)
scaffold0017 (117-190)||(26974-27047)
[»] scaffold0301 (1 HSPs)
scaffold0301 (87-193)||(21459-21563)
[»] scaffold0184 (1 HSPs)
scaffold0184 (147-192)||(16944-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (147-192)||(55855-55900)
[»] scaffold0625 (1 HSPs)
scaffold0625 (129-192)||(6607-6669)
[»] scaffold1844 (1 HSPs)
scaffold1844 (133-194)||(1114-1174)
[»] scaffold0432 (1 HSPs)
scaffold0432 (129-198)||(3373-3442)


Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 364 - 696
Target Start/End: Complemental strand, 31658233 - 31657910
Alignment:
Q  364 tgtgtgttttcttcttttcattcctcattcatattgtttaattttgttcaagattattattgcatttcttttagtttttgttgtcattgatttgctccac 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  31658233 tgtgtgttttcttcttttcattcctcattcatattgtttaattttgttcaagattattattgcattt-ttttggtttttgttgtcattgatttgctccac 31658135  T
Q  464 acatcatgtaatggtgtaactctgtttgaatattcacaatatctataaatgtttccgtgagcatatatatagctcagttggcagggccgcatgggcgatg 563  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||      ||||||||||||||||||||||| ||||||||    
T  31658134 acatcatgtatcggtgtaactctgtttgaatatttacaatatctataaatgtttccgtgagc------atagctcagttggcagggccgcaggggcgatg 31658041  T
Q  564 tattgttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaaaaataaattctaaccactagactacttnnnnnnnntagaat 663  Q
     |||||||| |||||||||||||||||||||  |||||| |||| |||||||||||||||| |||||||||||||||||| |||||         |||||    
T  31658040 cattgttatatgcagggttcgtggttcgaactccagacacctcagttattcactttaaaaagtaaattctaaccactagattacttaaaaaaa--agaat 31657943  T
Q  664 ttaatgatcaactgaaactcaaatattttatat 696  Q
    |||||||||||| ||||||||||||||||||||    
T  31657942 ttaatgatcaacggaaactcaaatattttatat 31657910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 40533388 - 40533250
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  40533388 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 40533289  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  40533288 atacacccaaatttattgggtgtaccatagaatttgcct 40533250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 2317104 - 2317246
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||    
T  2317104 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgt 2317203  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||    
T  2317204 accgatacacccaaatttattggatgtaccataaaatatgcct 2317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 37725688 - 37725550
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  37725688 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 37725589  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  37725588 atacacccaaatttattgggtgtaccatagaatttgcct 37725550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 36947752 - 36947889
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  36947752 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacag 36947851  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  36947852 atacacccaaatttattgggtgtaccatagaatttgcc 36947889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 490004 - 490140
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||||||||    
T  490004 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactaatttattattaattttacgacttggtgtaccg 490102  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  490103 atacacccaaatttattgggtgtaccatagaatttgcc 490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 1860061 - 1859925
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  1860061 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 1859962  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  1859961 cacccaaattcattgggtgtaccatagaatttgcctt 1859925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 45555516 - 45555380
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  45555516 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgacttggtgtaccgata 45555417  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    || ||||||||||||||||||||||| ||||||||||    
T  45555416 catccaaatttattgggtgtaccatagaatttgcctt 45555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 13568482 - 13568621
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  13568482 tatataaaatttaattatcttagtttttaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 13568581  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| ||||||||||||| ||||||||| ||||||||||    
T  13568582 atacatccaaatttattggatgtaccataaaatttgcctt 13568621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 3724211 - 3724348
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||||| |||||    
T  3724211 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtataccg 3724310  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  3724311 atacacccaaatttattaggtgtaccatagaatttgcc 3724348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 35292646 - 35292510
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  35292646 tatataaaatttaattatcttagttgtcaatgatagaaa-taattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 35292548  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  35292547 atacatccaaatttattgggtgtaccatagaatttgcc 35292510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 6657577 - 6657442
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  6657577 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 6657478  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||| |||| |||||||||| |||||||||    
T  6657477 cacccaaattcattgagtgtaccatagaatttgcct 6657442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 18009227 - 18009362
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||    
T  18009227 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgata 18009326  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||| ||||||||||| |||| |||| || ||||||    
T  18009327 cacctaaatttattggatgtatcatagaacttgcct 18009362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 7504296 - 7504434
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||| ||||||||||||||||| || |||||||||||||    
T  7504296 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactgatttattattaattttacgacttggtgtaccgat 7504395  T
Q  157 acacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  7504396 acacccaaattcattgggtgtaccatagaatttgccttt 7504434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 41839788 - 41839654
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  41839788 ataaaatttaattatcttaattgtcaatgatagaaaataattatttttcttcaagaaaacaactgatttattattaattttacgacttggtgtaccgata 41839689  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||| ||||||||| ||||||||    
T  41839688 cacccaaatttattggatgtaccataaaatttgcc 41839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 10711414 - 10711277
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  10711414 tatagaaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaacaacaactcatttattattaattttacgacttggtgtaccg 10711315  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||| ||||||||||||| ||||||||||| ||||||||    
T  10711314 atagacccaaatttattaggtgtaccatagaatttgcc 10711277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 16815120 - 16815256
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtacc 153  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||| ||||||||||||||||| |||||||||||||    
T  16815120 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaact-atttattattaattttacgatttggtgtacc 16815218  T
Q  154 gatacacccaaatttattgggtgtaccatataatttgc 191  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  16815219 gatacacccaaatttattaggtgtaccataaaatttgc 16815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 36192240 - 36192357
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  36192240 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 36192339  T
Q  155 atacacccaaatttattg 172  Q
    ||||||||||||||||||    
T  36192340 atacacccaaatttattg 36192357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 39879192 - 39879328
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||| |||||||||||||||||||| ||||||||||||||    
T  39879192 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctttaaaaaaacaactaatttattattaattttatgacttggtgtaccgata 39879291  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||| ||| | ||||||||| ||||||||||    
T  39879292 cacccaaattcattagatgtaccatagaatttgcctt 39879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 5085105 - 5085243
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||    
T  5085105 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcagaaaat-aactcatttattattaattttacgacttggtgt 5085203  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttg 190  Q
    || |||||||| ||||||||||||||||| ||| ||||||    
T  5085204 actgatacacctaaatttattgggtgtactatagaatttg 5085243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 21836473 - 21836336
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaata---attatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  21836473 ataaaatttaattatcttagttgtcaatgatagaaaatagtaattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 21836374  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  21836373 atacacccgaatttattgggtgtaccatagaatttgcc 21836336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 21425346 - 21425210
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||        ||||| ||||||||||||||| | || ||||||||||||||    
T  21425346 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttataaaaaacaactaatttattattaatttaacgaattggtgtaccgata 21425247  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21425246 cacccaaatttattgggtgtaccatagaatttgcctt 21425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 26738166 - 26738030
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| ||||||||||    
T  26738166 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgata 26738067  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    || ||||||| ||||||| ||||||| ||||||||||    
T  26738066 catccaaattcattgggtataccatagaatttgcctt 26738030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 33424005 - 33424137
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || |||| ||||||||    
T  33424005 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggcgtaccgat 33424104  T
Q  157 acacccaaatttattgggtgtaccatataattt 189  Q
    ||||||||||||||||| ||||||||| |||||    
T  33424105 acacccaaatttattggatgtaccatagaattt 33424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 28394204 - 28394085
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa--ctcatttattattaattttatgatttggtgtaccga 155  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||        ||  |||||||||||||||||||| || ||||||||||||    
T  28394204 ataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaaactcatttattattaattttacgacttggtgtaccga 28394105  T
Q  156 tacacccaaatttattgggt 175  Q
    ||||||||||||||||||||    
T  28394104 tacacccaaatttattgggt 28394085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 33716567 - 33716703
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||| ||| |  | ||||||||||||||    
T  33716567 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattagtttaacaaattggtgtaccgata 33716666  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||||||||| |||||| || ||||||||||    
T  33716667 cacccaaatttattggatgtaccgtagaatttgcctt 33716703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 193
Target Start/End: Original strand, 18576570 - 18576719
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttc-----------ttcnnnnnnncaactcatttattattaattttatgat 143  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||           |||       ||||||||||||||||||||||| ||     
T  18576570 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcaattatttttcttcaaaaaaacaactcatttattattaattttacgac 18576669  T
Q  144 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  18576670 ttggtgtaccaatacacccaaatttattggatgtaccataaaatttgcct 18576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 44068189 - 44068052
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| |||||||||||||||  ||||||||||| |||||||||||| ||||||||||       ||||| ||||||||||||||| |||| ||||| |    
T  44068189 ttgataaataaaatttaattattatagttgtcaatgatagaaaataataatttttcttcaaaaaa-caactaatttattattaatttaatgaattggtat 44068091  T
Q  151 accgatacacccaaatttattgggtgtaccatataattt 189  Q
    ||||||||||||||||||||||| | ||||||| |||||    
T  44068090 accgatacacccaaatttattggatataccataaaattt 44068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 16854339 - 16854413
Alignment:
Q  117 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 191  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16854339 caactcatttattattaattttacgatttggtgtaccgatacacccaaatttattaggtgtaccataaaatttgc 16854413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 14820050 - 14819916
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||| | ||  |||| ||| ||||    
T  14820050 ataaaatttaattattatagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaatttaacgacatggtatactgata 14819951  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||  ||||||||||| ||||||||    
T  14819950 cacccaaatttatcaggtgtaccatagaatttgcc 14819916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 31658403 - 31658355
Alignment:
Q  314 tgattattttgatgaatgaaacttcttgattttcttagtagtatttata 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31658403 tgattattttgatgaatgaaacttcttgattttcttagtagtatttata 31658355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31658542 - 31658493
Alignment:
Q  1 tgatcgtttaacttatgatgtcttgctcagttggttgataaattgataaa 50  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31658542 tgatcgtttaacttatgatgtcttgctcagttagttgataaattgataaa 31658493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 36049737 - 36049873
Alignment:
Q  58 ataaaatttaattatcttagttgtc-aatcatagaaaataatta-tttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccga 155  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||         || |||||||||| |||| ||| || ||||||||||||    
T  36049737 ataaaatttaattatcttagttgtcaaatgatagaaaataattatttttttttaaaaaaaataattcatttattactaatattacgacttggtgtaccga 36049836  T
Q  156 tacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||| ||||||| ||| | || |||| ||||||||    
T  36049837 tacacctaaatttagtggatatatcatagaatttgcc 36049873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 39620254 - 39620191
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | || | ||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  39620254 tattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 39620191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 31658263 - 31658230
Alignment:
Q  282 tcaaagtaagtcattattggacaaatattgtgtg 315  Q
    ||||||||||||||||||||||||||||||||||    
T  31658263 tcaaagtaagtcattattggacaaatattgtgtg 31658230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 11088280 - 11088213
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||||| |  ||||||||||||| ||||| ||||| | |||||||||||||| |||||||||||    
T  11088280 attattaatttaacaatttggtgtaccggtacactcaaatat-ttgggtgtaccatagaatttgccttt 11088213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 469
Target Start/End: Original strand, 12777809 - 12777868
Alignment:
Q  409 gttcaagattattattgcatttcttttagtttttgttgtcattgatttgctccacacatca 469  Q
    ||||||||||||||||||||| ||||| ||||| |||| || |||||||||| ||||||||    
T  12777809 gttcaagattattattgcattccttttggttttggttg-cactgatttgctcaacacatca 12777868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 11227689 - 11227627
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| ||||||||    
T  11227689 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcc 11227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 15362817 - 15362875
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  15362817 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 15362875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 268
Target Start/End: Complemental strand, 31658339 - 31658304
Alignment:
Q  233 ctaattcttgtaattgcttttcgaatttttgtgtaa 268  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31658339 ctaattcttgtaattgctttttgaatttttgtgtaa 31658304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 41555773 - 41555831
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| ||||||||||||||||||||||  |||||| ||| |||||||||| ||||||||    
T  41555773 aatttgatgatttggtgtaccgatacacttaaattt-ttgagtgtaccatagaatttgcc 41555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 42641146 - 42641260
Alignment:
Q  81 tcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtac 179  Q
    ||||| ||||||||| ||| |||||||||       ||||| ||||| |||||||||| | | ||||||| |||| ||||| |||| || ||||||||||    
T  42641146 tcaatgatagaaaatgattttttttcttcaaaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaatt-ttgggtgtac 42641244  T
Q  180 catataatttgccttt 195  Q
    |||| |||||||||||    
T  42641245 catagaatttgccttt 42641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 45157576 - 45157530
Alignment:
Q  146 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  45157576 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 45157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 58982 - 58918
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| | |||||| |||||| |||||| |||||| ||||||||||||||| | ||||||||    
T  58982 tattaatttaaggatttgatgtaccaatacactcaaatt-attgggtgtaccatagattttgcctt 58918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 1580603 - 1580648
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  1580603 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 1580648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 6884221 - 6884161
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||    
T  6884221 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttg 6884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 15176405 - 15176341
Alignment:
Q  128 ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||| ||| ||||||| |||| ||||| |||| | ||||||||||||||| |||||||||    
T  15176405 ttattaatttaatgctttggtgcaccggtacactcaaaat-attgggtgtaccatagaatttgcct 15176341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 32519002 - 32519143
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  32519002 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 32519101  T
Q  155 atacacccaaatttattgggtgtaccatataatttgccttta 196  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32519102 atacacccaaatttattgggtgtaccatataatttgccttta 32519143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 55 - 190
Target Start/End: Original strand, 16989382 - 16989517
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||    
T  16989382 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaacttatttattattaattttatgacttggtgtaccg 16989481  T
Q  155 atacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||||||||||||||||||||||| ||||||    
T  16989482 atacacccaaatttattgggtgtaccataaaatttg 16989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 51 - 195
Target Start/End: Complemental strand, 18871064 - 18870919
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtg 149  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||    
T  18871064 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcatcaaaaaaaacaactcatttattattaattttatgacttggtg 18870965  T
Q  150 taccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  18870964 taccgatacacccaaatttattggatgtaccatagaatttgccttt 18870919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 35225100 - 35225236
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  35225100 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 35225199  T
Q  155 atacacccaaatttattgggtgtaccatataatttgc 191  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  35225200 atacacccaaatttattggatgtaccatagaatttgc 35225236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 26810914 - 26810775
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  26810914 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 26810815  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||| ||||||||| ||||||||||| ||||| ||||    
T  26810814 atacacctaaatttattaggtgtaccatagaatttacctt 26810775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 1338995 - 1338853
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtg 149  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||    
T  1338995 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcatcaaaaaaaacaactcatttattattaattttatgacttggtg 1338896  T
Q  150 taccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  1338895 taccgatacacccaaatttattggatgtaccatagaatttgcc 1338853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 9226334 - 9226199
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  9226334 ataaaatttaattatcttagttgtcaatgatagaaaaaaattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 9226235  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||| ||||||||||||||| |||||||||    
T  9226234 cacccaaattcattgggtgtaccatagaatttgcct 9226199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 55 - 193
Target Start/End: Original strand, 6016074 - 6016212
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       || || ||||||||||||||||| || |||||||||||    
T  6016074 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacagcttatttattattaattttacgacttggtgtaccg 6016173  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||  |||||||||||||||||||||| |||||||||    
T  6016174 atacattcaaatttattgggtgtaccatagaatttgcct 6016212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 33954588 - 33954480
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  33954588 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttc-aaaaaacaactcatttattattaattttacgacttggtgtaccg 33954490  T
Q  155 atacacccaa 164  Q
    ||||||||||    
T  33954489 atacacccaa 33954480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 58 - 165
Target Start/End: Original strand, 27719277 - 27719384
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  27719277 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 27719376  T
Q  158 cacccaaa 165  Q
    ||| ||||    
T  27719377 cactcaaa 27719384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 24025665 - 24025531
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaa-taattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||||||||       ||||| | |||||||||||||||  | |||||||||||||    
T  24025665 ataaaatttaattatcttagttgtcaatgatagaaaatttattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccgat 24025566  T
Q  157 acacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||| ||| ||||||||||| ||||||||    
T  24025565 acacccaaattcatt-ggtgtaccatagaatttgcc 24025531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 34315397 - 34315530
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||  |||||||||||||||| || ||||| ||||||||    
T  34315397 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaact-gtttattattaattttacgacttggtataccgata 34315494  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||| ||||| ||||| ||||||||| |||||||||    
T  34315495 cacctaaattcattggatgtaccatagaatttgcct 34315530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 34969586 - 34969491
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 153  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  34969586 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgatttggtgtacc 34969491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 29639007 - 29639110
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttgg-tgtaccgat 156  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||       |||||||||||||||||||||||||| |||| |||||||||    
T  29639007 ataaaatttaattatcttagttgtcaatgatagaaaatgattatgtttcttc-aaaaaacaactcatttattattaattttatgacttggatgtaccgat 29639105  T
Q  157 acacc 161  Q
    |||||    
T  29639106 acacc 29639110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 370 - 494
Target Start/End: Original strand, 7325125 - 7325252
Alignment:
Q  370 ttttcttcttttcattcctcattcatattgtt---taattttgttcaagattattattgcatttctttt-agtttttgttgtcattgatttgctccacac 465  Q
    |||||||||| || |||||| |||||||||||   || ||||||||||||||||||||||||| |||||   |||||||||||||||||||| |||||||    
T  7325125 ttttcttcttctccttcctccttcatattgttgtttacttttgttcaagattattattgcattccttttgtttttttgttgtcattgatttgatccacac 7325224  T
Q  466 atcatgtaatggtgtaactctgtttgaat 494  Q
    |||| ||  |||||| |||||||| ||||    
T  7325225 atcaagt-ctggtgtgactctgttcgaat 7325252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 21181253 - 21181137
Alignment:
Q  78 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtgtaccgatacacccaaatttattgggtg 176  Q
    |||||||| |||||||| ||||||||||||||       |||||  ||| | ||| ||||| |||||||||||||||||||||| ||||||| ||| |||    
T  21181253 ttgtcaatgatagaaaacaattatttttcttcgaaaaaacaacttgtttcaatataaatttgatgatttggtgtaccgatacactcaaattt-ttgagtg 21181155  T
Q  177 taccatataatttgcctt 194  Q
    ||||||| ||||||||||    
T  21181154 taccatagaatttgcctt 21181137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 6974965 - 6975103
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtg 149  Q
    |||||| |||||||||||||||  || || | ||| ||||||||||||||||| |||||       |||||||||| ||||||||||| |  |||||||     
T  6974965 ttgataaataaaatttaattattataattataaatgatagaaaataattatttatcttcaaaaaaacaactcatttaattattaatttaacaatttggta 6975064  T
Q  150 taccgatacacccaaatttattgggtgtaccatataattt 189  Q
    |||||  |||| ||||||| |||||||||||||| |||||    
T  6975065 taccggcacactcaaattt-ttgggtgtaccatagaattt 6975103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 1705664 - 1705605
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||    
T  1705664 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcct 1705605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 32834118 - 32834181
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| ||||||||||||||| |||||| |||| ||||| ||||||||||| |||||||||    
T  32834118 tattaatttaatgatttggtgtaccaatacactcaaa-ttattaggtgtaccatagaatttgcct 32834181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 565 - 649
Target Start/End: Original strand, 4844173 - 4844259
Alignment:
Q  565 attgttatgtgcagggttcgtggttcgaacctcagacatctcaattattcacttt--aaaaaataaattctaaccactagactactt 649  Q
    |||||||| ||||||| ||| ||||  ||||||||||| |||| |||||||| ||  ||||| | ||||||||||||||||||||||    
T  4844173 attgttatatgcaggggtcggggtttaaacctcagacacctcacttattcaccttgaaaaaagtgaattctaaccactagactactt 4844259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 8549916 - 8549961
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  8549916 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 8549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 9661828 - 9661752
Alignment:
Q  117 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||  ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  9661828 caactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 9661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 7344607 - 7344722
Alignment:
Q  78 ttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggt 175  Q
    |||||||| |||||||| ||||||||||||||        |||||| |||| ||||| |||| || ||||||||||||| ||||| |||| || ||||||    
T  7344607 ttgtcaatgatagaaaacaattatttttcttcaaaaaaaacaactcgtttaattatttatttaataatttggtgtaccggtacactcaaa-ttgttgggt 7344705  T
Q  176 gtaccatataatttgcc 192  Q
    |||||||| ||||||||    
T  7344706 gtaccatagaatttgcc 7344722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 11273689 - 11273736
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  11273689 ataagatttaattattatagttgtcaatgatagaaaataattattttt 11273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 14715539 - 14715586
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  14715539 ataagatttaattattatagttgtcaatgatagaaaataattattttt 14715586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 24151398 - 24151445
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  24151398 ataagatttaattattatagttgtcaatgatagaaaataattattttt 24151445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 24248862 - 24248804
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  24248862 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 24248804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 15383559 - 15383611
Alignment:
Q  140 tgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| |||| |||||| ||||||| |||| |||||||||||||||||||    
T  15383559 tgatttggtataccaatacactcaaattt-ttggatgtaccatataatttgcct 15383611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 43224911 - 43225052
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||    
T  43224911 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgt 43225010  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  43225011 accgatacacccaaatttattgggtgtaccatagaatttgcc 43225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 55 - 193
Target Start/End: Original strand, 7426930 - 7427068
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  7426930 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 7427029  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  7427030 atacacccaaatttattgggtgtaccatagaatttgcct 7427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 14191027 - 14190887
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  14191027 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 14190928  T
Q  155 atacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  14190927 atacacccaaatttattgggtgtaccataaaatttgccttt 14190887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 3150455 - 3150594
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  3150455 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 3150554  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||| ||||||||| ||||| ||||    
T  3150555 atacacccaaatttattggatgtaccatagaatttacctt 3150594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 17376489 - 17376350
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  17376489 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 17376390  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctttaa 197  Q
    |||||||||||||||| ||||||||| |||||| ||||||    
T  17376389 cacccaaatttattggatgtaccatagaatttgtctttaa 17376350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 25493632 - 25493497
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||| |||    
T  25493632 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccaata 25493533  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||||| ||||||||| |||||||||    
T  25493532 cacccaaatttattggatgtaccatagaatttgcct 25493497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 54 - 193
Target Start/End: Complemental strand, 46872507 - 46872368
Alignment:
Q  54 atatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||    
T  46872507 atatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtacc 46872408  T
Q  154 gatacacccaaatttattgggtgtaccatataatttgcct 193  Q
     |||||||||||||||||||||||| |||| |||||||||    
T  46872407 aatacacccaaatttattgggtgtatcatagaatttgcct 46872368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 8569249 - 8569381
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  8569249 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaagaaaaactcatttattattaattttacgacttggtgtaccgata 8569348  T
Q  158 cacccaaatttattgggtgtaccatataatttg 190  Q
    |||||||||||||||||||||||||| ||||||    
T  8569349 cacccaaatttattgggtgtaccatagaatttg 8569381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 51 - 183
Target Start/End: Original strand, 52273985 - 52274117
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||    
T  52273985 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgt 52274084  T
Q  151 accgatacacccaaatttattgggtgtaccata 183  Q
    ||||||||| ||||||||||||| |||||||||    
T  52274085 accgatacatccaaatttattggatgtaccata 52274117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 9223127 - 9223262
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnnc-aactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||| ||||||||||||||||    
T  9223127 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaataactcatttattattaattttacgatttggtgtaccgat 9223226  T
Q  157 acacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9223227 acacccaaatttattgggtgtaccatagaatttgcc 9223262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 33829135 - 33829274
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| || ||||||||||     
T  33829135 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatctattattaattttacgacttggtgtacca 33829234  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  33829235 atacacccaaatttattggatgtaccatagaatttgcctt 33829274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 33838831 - 33838692
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| || ||||||||||     
T  33838831 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatctattattaattttacgacttggtgtacca 33838732  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  33838731 atacacccaaatttattggatgtaccatagaatttgcctt 33838692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 27801944 - 27801810
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  27801944 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 27801845  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || ||||||||||||||||||| ||| ||||||||    
T  27801844 catccaaatttattgggtgtacaatagaatttgcc 27801810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 10061294 - 10061157
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  10061294 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtactg 10061195  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||  ||||||||| ||||||||    
T  10061194 atacacccaaatttattgaatgtaccatagaatttgcc 10061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 39853094 - 39852959
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| ||    
T  39853094 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcg 39852995  T
Q  155 atacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||| ||||||||||||||||| ||| ||||||    
T  39852994 atacacctaaatttattgggtgtactatagaatttg 39852959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 48480984 - 48480849
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  48480984 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 48480885  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||| ||||||| ||||||| |||||||||    
T  48480884 cacccaaattcattgggtataccatagaatttgcct 48480849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 29171299 - 29171165
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| |||||    
T  29171299 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcgata 29171200  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||| | ||||||||||||| ||||||||    
T  29171199 cacccaaattcactgggtgtaccatagaatttgcc 29171165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 44647515 - 44647649
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  44647515 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 44647614  T
Q  155 atacacccaaatttattgggtgtaccatataattt 189  Q
    ||||| ||||||||||  ||||||||||| |||||    
T  44647615 atacatccaaatttatcaggtgtaccatagaattt 44647649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 47860992 - 47861131
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||||||||||||||||||||||| || | ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||    
T  47860992 ttgatatataaaatttaattatcttaattataaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgt 47861091  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||||||||||||||||| ||||| ||| ||||||    
T  47861092 accgatacacccaaatttattggatgtacgatagaatttg 47861131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 5057333 - 5057199
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || ||||||||||||||    
T  5057333 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactgatttattattaattttacgacttggtgtaccgata 5057234  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||| ||||| ||||||||||||||| ||||||||    
T  5057233 cacctaaattcattgggtgtaccatagaatttgcc 5057199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 24248075 - 24248209
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  24248075 ataaaatttaattctcttagttgtcaatgatataaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 24248174  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| | ||||||||| ||||||||    
T  24248175 cacccaaatttattagatgtaccatagaatttgcc 24248209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 27038680 - 27038543
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||    
T  27038680 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccg 27038581  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||| |||||||||||  ||||| ||| ||||||||    
T  27038580 atacactcaaatttattgaatgtactataaaatttgcc 27038543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 55 - 193
Target Start/End: Original strand, 37765523 - 37765662
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc-nnnnnnncaactcatttattattaattttatgatttggtgtacc 153  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || || ||| |||    
T  37765523 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttagtgcacc 37765622  T
Q  154 gatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||| |||||||||||||||| |||||| |||||||||    
T  37765623 gatacatccaaatttattgggtgcaccatagaatttgcct 37765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 40850155 - 40850022
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||| || ||||||||||||||    
T  40850155 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttaaaaaaa--aactcatttattattaattttacgacttggtgtaccgata 40850058  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||||| ||||| ||| |||||||||    
T  40850057 cacccaaatttattggatgtactatagaatttgcct 40850022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 48868336 - 48868470
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||  ||||||||    
T  48868336 ataaaatttaattatcttagttgttaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggaataccgata 48868435  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||| ||||||||| | ||||||    
T  48868436 cacccaaatttattggatgtaccatagactttgcc 48868470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 9260089 - 9260225
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||| ||||||||||    
T  9260089 ataaaatttaattaccttagttatcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttgatgtaccgata 9260188  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  9260189 catccaaattcattgggtgtaccatagaatttgcctt 9260225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 41321139 - 41321008
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |       |||| |||| ||||||||||||| || |||||| |||||||    
T  41321139 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctacaaaaaaacaacacattcattattaattttacgacttggtgaaccgata 41321040  T
Q  158 cacccaaatttattgggtgtaccatataattt 189  Q
    ||||||||||||||||||||||| || |||||    
T  41321039 cacccaaatttattgggtgtaccgtagaattt 41321008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 33234327 - 33234461
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||| || | ||||||||||||||    
T  33234327 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaataaattggtgtaccgata 33234426  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||| | | ||||||||    
T  33234427 cacccaaatttattgggtgtactacagaatttgcc 33234461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 50502617 - 50502756
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  50502617 ataaaatttaattatcttagttgtcaatgatagaaattaattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 50502716  T
Q  158 caccc----aaatttattgggtgtaccatataatttgcct 193  Q
    |||||    ||||| |||||||||| |||| |||||||||    
T  50502717 cacccaattaaattcattgggtgtatcataaaatttgcct 50502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 2684144 - 2684011
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| |||| |||||    
T  2684144 ataaaatttaattatcttagttgacaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttgatgtatcgata 2684046  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || ||||||||||| ||||||||||| ||||||||    
T  2684045 catccaaatttattaggtgtaccatagaatttgcc 2684011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 28095021 - 28095156
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||| | ||||||||||||||| |||| ||||||||||||||    
T  28095021 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaattaatttattattaatttaatgaattggtgtaccgata 28095120  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
     ||||||||||||||| ||||||||| ||||||||||    
T  28095121 -acccaaatttattggatgtaccatagaatttgcctt 28095156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 31571239 - 31571353
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  31571239 tatataaagtttaactatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 31571338  T
Q  155 atacacccaaattta 169  Q
    ||| |||||||||||    
T  31571339 atagacccaaattta 31571353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 10635669 - 10635802
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc-nnnnnnncaactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |        |||||||||||||||||| |||| || |||||||||||||    
T  10635669 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctccaaaaaaaacaactcatttattattaactttacgacttggtgtaccgat 10635768  T
Q  157 acacccaaatttattgggtgtaccatataatttg 190  Q
    ||| ||||| ||||| ||||||||||| ||||||    
T  10635769 acatccaaaattattaggtgtaccatagaatttg 10635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 14131627 - 14131756
Alignment:
Q  58 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 156  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||||||||||       |||      |||||||||||||| ||||||||||||||||    
T  14131627 ataaaatttaattttcttagttgtcaaataatagaaaataattatttttcttcaataaaacaa------tattattaattttacgatttggtgtaccgat 14131720  T
Q  157 acacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14131721 acacccaaatttattgggtgtaccatagaatttgcc 14131756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 49739277 - 49739141
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||| |  | ||||||||||||||    
T  49739277 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactaatttattattaatttaacaaattggtgtaccgata 49739178  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||| || ||||||||| ||||||||||    
T  49739177 cacccaaatttatcggatgtaccatagaatttgcctt 49739141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 20280355 - 20280223
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  |||||||||||  |||||||||||||||||||||        ||||| ||||||||||||||| |||| ||||||||||||||    
T  20280355 ataaaatttaattattatagttgtcaatggtagaaaataattatttttctt-aaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 20280257  T
Q  158 cacccaaatttattgggtgtaccatataatttgc 191  Q
    |||||||||||||||  ||||||||| |||||||    
T  20280256 cacccaaatttattgaatgtaccatagaatttgc 20280223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 22821382 - 22821249
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||  | | ||||||| |||||||||||||||||||||||        ||||||||||||||||||||| | || |||||||||||||    
T  22821382 ataaaatttaattattattgctgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaatttaacgacttggtgtaccgat 22821283  T
Q  157 acacccaaatttattgggtgtaccatataatttg 190  Q
    ||| ||||||||||||| ||||||||| ||||||    
T  22821282 acatccaaatttattggatgtaccatagaatttg 22821249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 52079580 - 52079440
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt--cnnnnnnncaactcatttattattaattttatgatttggtgtac 152  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||          |||||||||||||||||||||||  | || ||||||    
T  52079580 tatataaaatttaattatcttagttgtcaaagatagaaaataattatttttcttaaaaaaaaaacaactcatttattattaattttacaacttagtgtac 52079481  T
Q  153 cgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||| ||||||||||||  ||||||||  |||||||||    
T  52079480 cgatacatccaaatttattgaatgtaccattgaatttgcct 52079440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 1658833 - 1658948
Alignment:
Q  78 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgt 177  Q
    |||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| |||||||||||||| ||||| || | ||||    
T  1658833 ttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgatacaccaaaattcatcgagtgt 1658932  T
Q  178 accatataatttgcct 193  Q
    |||||| |||||||||    
T  1658933 accatagaatttgcct 1658948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 31016140 - 31016222
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttat 140  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  31016140 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaacacatttattattaattttat 31016222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 49686045 - 49685984
Alignment:
Q  132 taattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49686045 taattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 49685984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 41550419 - 41550532
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  || |||||||| | | |||||||||||||||||||       ||||| ||||||||||||||| || | ||||| ||||||||    
T  41550419 ataaaatttaattattataattgtcaatgagaaaaaataattatttttcttcaaaaaaacaactaatttattattaatttaataaattggtataccgata 41550518  T
Q  158 cacccaaatttatt 171  Q
    ||||||||||||||    
T  41550519 cacccaaatttatt 41550532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 34256517 - 34256450
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||||| || ||||||||||||||||||| |||| || |||||||||||||| |||||||||||    
T  34256517 attattaatttaataatttggtgtaccgatacactcaaa-ttgttgggtgtaccatagaatttgccttt 34256450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 31075942 - 31076017
Alignment:
Q  118 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||| |||||||||| |||| | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  31075942 aactcatttaattattaatttaatgaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 31076017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 33771917 - 33771967
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 108  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  33771917 ataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 33771967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 41757137 - 41757215
Alignment:
Q  59 taaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattt 137  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||| |||       ||||| |||||||||||||||    
T  41757137 taaaatttaattattatagttgtcaatcatataaaataattatttttattcaaaaaaacaacttatttattattaattt 41757215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 9166935 - 9166872
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||  |||||||||||||| |||||| ||||||| |||||||||| |||||||||||||    
T  9166935 tattaatttattgatttggtgtaccaatacactcaaattt-ttgggtgtactatataatttgcct 9166872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 38207879 - 38207936
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 191  Q
    ||||| |||||||||||||||||||||| ||||||| ||| | ||||||||||||||||    
T  38207879 aatttgatgatttggtgtaccgatacactcaaattt-ttgagcgtaccatataatttgc 38207936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 477796 - 477841
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  477796 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 11778980 - 11779040
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||| |||||||| |||||| |||||| ||||| | |||||||||||||||||||||    
T  11778980 tattaatttaatgatttgttgtaccaatacactcaaatct-ttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 16482638 - 16482574
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| | ||||||||||||| ||||||  ||||| ||||||||||||||| ||||||||||    
T  16482638 tattaatttaaggatttggtgtaccaatacacttaaatt-attgggtgtaccatagaatttgcctt 16482574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 21072819 - 21072770
Alignment:
Q  149 gtaccgatacacccaaatttattgggtgtaccatataatttgcctttaat 198  Q
    |||||||||||  ||||| |||||||||||||||||||||||||| ||||    
T  21072819 gtaccgatacagtcaaatgtattgggtgtaccatataatttgcctataat 21072770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 44978933 - 44978869
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||| || ||||||||||||| ||||| |||| || |||||||||||||| ||||||||    
T  44978933 attattaatttaataatttggtgtaccggtacactcaaa-ttgttgggtgtaccatagaatttgcc 44978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 7435571 - 7435512
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| |||||||||    
T  7435571 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcct 7435512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 35305213 - 35305146
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 197  Q
    ||||||||| |  |||||||||||| |||||| ||||||  |||||||||||||| |||||||||||||    
T  35305213 tattaatttaagaatttggtgtaccaatacactcaaattg-ttgggtgtaccatagaatttgcctttaa 35305146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 35874300 - 35874348
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||| |||||| ||||| |||||||||||||||| |||||||||||    
T  35874300 gtgtaccaatacactcaaatatattgggtgtaccatagaatttgccttt 35874348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 50631897 - 50631989
Alignment:
Q  90 gaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccat 182  Q
    |||| |||||||||||||||       ||||||||||| |||||||||| | | |||||||||||| ||||| |||| ||||||||||||||||    
T  50631897 gaaagtaattatttttcttcaaaaaatcaactcatttaattattaatttaacgctttggtgtaccggtacactcaaa-ttattgggtgtaccat 50631989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 51781448 - 51781507
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 189  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| |||||    
T  51781448 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 922186 - 922248
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||||    
T  922186 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 5957531 - 5957578
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  5957531 ataagatttaattattatagttgtcaatgatagaaaataattattttt 5957578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 12227256 - 12227121
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt-cttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccga 155  Q
    |||| ||||||||||  || || ||||| ||||||||||||||||||| ||||       ||||| ||||| |||||||||| ||| |||||||||| |     
T  12227256 ataagatttaattattataattatcaatgatagaaaataattattttttcttcaaaaaaacaactaatttaattattaatttaatgctttggtgtactgg 12227157  T
Q  156 tacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| |||| |  |||||||||||||| ||||||||    
T  12227156 tacactcaaaatg-ttgggtgtaccatagaatttgcc 12227121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 14077463 - 14077416
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||||||||||||  || |||||||| |||||||||||||||||||    
T  14077463 ataaaatttaattattataattgtcaatgatagaaaataattattttt 14077416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 17554179 - 17554226
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  17554179 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 17554226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 24230931 - 24230978
Alignment:
Q  146 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||| ||||| |||||| ||||||||| |||||||||    
T  24230931 ggtgtaccgatacactcaaatatattggatgtaccatagaatttgcct 24230978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 27295120 - 27295058
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||||    
T  27295120 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 28493872 - 28493806
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttta 196  Q
    ||||||||| | ||||||||||| | ||||||  ||||| ||||||||||||||| ||||||||||||    
T  28493872 tattaatttaaggatttggtgtaacaatacacttaaatt-attgggtgtaccatagaatttgccttta 28493806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 50534157 - 50534204
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  50534157 ataagatttaattattatagttgtcaatgatagaaaataattattttt 50534204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 12178655 - 12178605
Alignment:
Q  143 tttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||| ||||||||| ||| ||||| ||||||||||||| ||||||||||||    
T  12178655 tttgatgtaccgatgcactcaaatatattgggtgtaccgtataatttgcct 12178605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 649
Target Start/End: Original strand, 13941349 - 13941435
Alignment:
Q  565 attgttatgtgcagggttcgtggttcgaacctcagacatctcaattattca-ctttaaaaaa-taaattctaaccactagactactt 649  Q
    |||||||| ||||||||||| ||||||||| || |||| | || ||||||| ||| |||||| | |||||||||||||| |||||||    
T  13941349 attgttatatgcagggttcgaggttcgaacttcggacaccccacttattcatcttgaaaaaagtgaattctaaccactaaactactt 13941435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 39084980 - 39085034
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  39084980 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 39085034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 85
Target Start/End: Original strand, 49289499 - 49289529
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaat 85  Q
    |||||||||||||||||||||||||||||||    
T  49289499 tatataaaatttaattatcttagttgtcaat 49289529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 51056244 - 51056194
Alignment:
Q  145 tggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    |||||||||| ||||| ||||| |||| ||||||||||| |||||||||||    
T  51056244 tggtgtaccggtacactcaaatatattaggtgtaccatagaatttgccttt 51056194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 2247129 - 2247069
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||| ||||||||||||||| |||||| ||||| | || ||||||||||| ||||||    
T  2247129 tattaatttaatgatttggtgtaccaatacactcaaatct-ttaggtgtaccatagaatttg 2247069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 646
Target Start/End: Complemental strand, 26321786 - 26321749
Alignment:
Q  609 ttattcactttaaaaaataaattctaaccactagacta 646  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  26321786 ttattcactttaaaaaataaattttaaccactaaacta 26321749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 48313574 - 48313631
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 108  Q
    |||||| |||| ||| ||||||  || |||||||| ||||||||||||||||||||||    
T  48313574 ttgataaataagattgaattattataattgtcaatgatagaaaataattatttttctt 48313631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 51184104 - 51184044
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||| |||||||| |||||| |||||| ||||| | |||||||||||||| ||||||    
T  51184104 tattaatttaatgatttgttgtaccaatacactcaaatct-ttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 25684210 - 25684072
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  25684210 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 25684111  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  25684110 atacacccaaatttattgggtgtaccatagaatttgcct 25684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 2148399 - 2148535
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||    
T  2148399 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgata 2148498  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||||||||||||||||| | ||||||||||    
T  2148499 cacccaaatttattgggtgtaccaaagaatttgcctt 2148535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 55 - 193
Target Start/End: Original strand, 39540989 - 39541127
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||    
T  39540989 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgatttggtgtatcg 39541088  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||| ||||||||||||||||||| ||| |||||||||    
T  39541089 atacatccaaatttattgggtgtacaatagaatttgcct 39541127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 10453417 - 10453280
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  10453417 tatataaaatttaattatcttagttgtcaataatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 10453318  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||| |||||||| || ||||||||    
T  10453317 atacacccaaatttatttggtgtaccgtagaatttgcc 10453280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 15726082 - 15725945
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| ||    
T  15726082 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcg 15725983  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  15725982 atacacccaaatttattgggtgtaccataaaatttgcc 15725945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 37314107 - 37314244
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||||||    
T  37314107 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttaggacttagtgtaccg 37314206  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  37314207 atacacccaaatttattgggtgtaccatagaatttgcc 37314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 23189337 - 23189471
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| |||||||    
T  23189337 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccg 23189436  T
Q  155 atacacccaaatttattgggtgtaccatataattt 189  Q
    ||||||||||||||||||||||||||||| |||||    
T  23189437 atacacccaaatttattgggtgtaccatagaattt 23189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 55 - 189
Target Start/End: Complemental strand, 40340565 - 40340430
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtacc 153  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||||||| |||||||| |    
T  40340565 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttatgacttggtgtaac 40340466  T
Q  154 gatacacccaaatttattgggtgtaccatataattt 189  Q
    |||||||||||||||||||||||||||||| |||||    
T  40340465 gatacacccaaatttattgggtgtaccatagaattt 40340430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 31236859 - 31237001
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||       ||||||||||||||||||||||| || ||| |||||||    
T  31236859 tatataaaatttaattatcttagttgtcaatgatagaaaatagttatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccg 31236958  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctttaa 197  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||    
T  31236959 atacatccaaatttattgggtgtaccatagaatttgccattaa 31237001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 42534663 - 42534797
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||| || || |||||||||||    
T  42534663 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattctacgacttggtgtaccg 42534762  T
Q  155 atacacccaaatttattgggtgtaccatataattt 189  Q
    |||||||||||||||| |||||||||||| |||||    
T  42534763 atacacccaaatttatagggtgtaccatagaattt 42534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 33001720 - 33001852
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  33001720 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 33001819  T
Q  158 cacccaaatttattgggtgtaccatataatttg 190  Q
    |||||||||| ||||||||||||||| ||||||    
T  33001820 cacccaaattcattgggtgtaccatagaatttg 33001852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 16729861 - 16729726
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||    
T  16729861 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccg 16729762  T
Q  155 atacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||| ||||||||||||| ||||||||| ||||||    
T  16729761 atacatccaaatttattggatgtaccatagaatttg 16729726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 10688526 - 10688392
Alignment:
Q  59 taaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatac 158  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||       ||| ||||||||||||||||||| || |||||||||||||||    
T  10688526 taaaatttaattatcttagtcgtcaatgatagaaaataattatttttcttcaaaaaagcaaatcatttattattaattttacgacttggtgtaccgatac 10688427  T
Q  159 acccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||| ||||||||| |||||||||    
T  10688426 acccaaatttattggatgtaccatagaatttgcct 10688392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 41631355 - 41631218
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||        ||||| ||||||||||||||||| || |||||||||||    
T  41631355 tatataaaatttaattatcttagttgtcaatgaaagaaaataattatttttctttaaaaaaacaacttatttattattaattttacgacttggtgtaccg 41631256  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  41631255 atacacctaaatttattgggtgtaccataaaatttgcc 41631218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 22798340 - 22798478
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaata---attatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||||||||       |||||||||||||||||||||||  | |||||||||||    
T  22798340 ataaaatttaattatcttagttgtcaatgatagaaaatagtaattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtaccg 22798439  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  22798440 atacacccaaatttattgggtgtaccatagaatttgcct 22798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 3881972 - 3881831
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||    
T  3881972 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaat-aacttatttattattaattttatgatttggtgt 3881874  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||| ||||||| ||||||||||  | |||||||||||||||||    
T  3881873 accaatacacctaaatttattgaatataccatataatttgcct 3881831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 8068589 - 8068722
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||        |||||||| |||||||||||||||| |||||||| ||    
T  8068589 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaat-aactcattcattattaattttatgacttggtgtaacg 8068687  T
Q  155 atacacccaaatttattgggtgtaccatataattt 189  Q
    ||||||||||||||||||||||||||||| |||||    
T  8068688 atacacccaaatttattgggtgtaccatagaattt 8068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 13589137 - 13589271
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||  | ||||||||||||||    
T  13589137 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacaacttggtgtaccgata 13589236  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||| |||||||||||| || ||||||||    
T  13589237 cacccaaattcattgggtgtaccgtagaatttgcc 13589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 28770219 - 28770352
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| ||||    
T  28770219 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtactgata 28770317  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||| ||||||||||| |||||||||    
T  28770318 cacccaaatttatt-ggtgtaccatagaatttgcct 28770352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 9530496 - 9530363
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || ||||||||||||||    
T  9530496 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactgatttattattaattttacgacttggtgtaccgata 9530397  T
Q  158 cacccaaatttattgggtgtaccatataatttgc 191  Q
    |||||||||| ||||| ||||||||| |||||||    
T  9530396 cacccaaattcattggatgtaccatagaatttgc 9530363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 19126046 - 19125912
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || |||||||||||||||||||||| ||| | ||||||||    
T  19126046 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaattcatttattattaattttatgacttgatataccgata 19125947  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||| ||||||||||| ||||||||| ||||||||    
T  19125946 cacctaaatttattggatgtaccatagaatttgcc 19125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 4094795 - 4094657
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| |||||| |||||||    
T  4094795 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgatttgatgtaccg 4094696  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    | | | ||||||||||||| ||||| ||| |||||||||    
T  4094695 acatatccaaatttattggatgtacgatagaatttgcct 4094657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 32624310 - 32624176
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||| ||||||  ||||||||||| |||||||||||||||||||||||        || | ||||||||||||||| | || ||||||||||||||    
T  32624310 ataaaattaaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataattaatttattattaatttaacgaattggtgtaccgata 32624211  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||||||| ||||||||    
T  32624210 cacccaaatttattgggtgtaccataaaatttgcc 32624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 22279491 - 22279622
Alignment:
Q  60 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 159  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||       ||||| | |||||||||||||||  | ||||||||||| ||||    
T  22279491 aaaatttaattatcttagttgtcaatgatagaaaattattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccggtaca 22279590  T
Q  160 cccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| ||| ||||||||||| ||||||||    
T  22279591 cccaaattcatt-ggtgtaccatagaatttgcc 22279622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 43411789 - 43411884
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 153  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  43411789 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgatttggtgtacc 43411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 32063798 - 32063919
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||    
T  32063798 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttaaaaaaaaaaaacaactcatttattattaattttacgatttggtgtaccgat 32063897  T
Q  157 acacccaaatttattgggtgta 178  Q
    ||| ||||||||||||| ||||    
T  32063898 acatccaaatttattggatgta 32063919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 11758752 - 11758612
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa--ctcattta-----ttattaattttatgatttggtgt 150  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||        ||  ||||||||     |||||||||||| || |||||||    
T  11758752 ataaaatttaattatcttagttgtcaatgatagaaaataattatttt-cttcaaaaaaaaaaaactcatttaatttattattaattttacgacttggtgt 11758654  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    || |||||||||||||||||||||||||||||| ||||||||    
T  11758653 actgatacacccaaatttattgggtgtaccatagaatttgcc 11758612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 37963257 - 37963391
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| |||||||||||| ||||||||||        |||| ||||||||||||||| || | ||||||||||||||    
T  37963257 ataaaatttaattattatagttgtcaatgatagaaaataataatttttcttcaaaaaaataactaatttattattaatttaataaattggtgtaccgata 37963356  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || |||||||||||||  |||| ||| ||||||||    
T  37963357 catccaaatttattggacgtactatagaatttgcc 37963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 34859707 - 34859841
Alignment:
Q  58 ataaaatttaattatcttagttgtc-aatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 156  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||| |||||||||| |||||||| || |||| ||||        
T  34859707 ataaaatttaattatcttagttgtcaaatgatagaaaataattatttttcttcaaaaaaacaattcatttattactaattttacgacttggcgtac---g 34859803  T
Q  157 acacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||| ||||||||||||| ||||| ||||    
T  34859804 acacccaaatttaatgggtgtaccatagaatttacctt 34859841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 28332183 - 28332120
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||  |||||||||||||| |||||| ||||||| ||| |||||||||| ||||||||    
T  28332183 tattaatttgttgatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 34302708 - 34302642
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttta 196  Q
    ||||||||| | |||||| |||||| |||||| |||||| ||||||||||||||| ||||||||||||    
T  34302708 tattaatttaaggatttgatgtaccaatacactcaaatt-attgggtgtaccatagaatttgccttta 34302642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 23408381 - 23408255
Alignment:
Q  63 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacc 161  Q
    ||||||||||  || |||||||| |||||||| |  | |||||||||       |||||| |||| |||||||||| || ||||||||||||| |||||     
T  23408381 atttaattattgtaattgtcaataatagaaaacagatttttttcttcaaaaaaacaactcgtttacttattaatttaataatttggtgtaccggtacact 23408282  T
Q  162 caaatttattgggtgtaccatataattt 189  Q
    |||| || ||||||||||||||||||||    
T  23408281 caaa-ttgttgggtgtaccatataattt 23408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 27353461 - 27353419
Alignment:
Q  152 ccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  27353461 ccgatacacccaaatttattgggtataccatagaatttgcctt 27353419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 4618056 - 4618120
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||||    
T  4618056 tattaatttattgatttggtgtaccaatacactcaaattt-ttaggtgtaccataaaatttgcctt 4618120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 5204967 - 5205027
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  5204967 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 5205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 6560888 - 6560828
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| ||||||    
T  6560888 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 40756891 - 40756951
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  40756891 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 40756951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 43393088 - 43393159
Alignment:
Q  118 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 189  Q
    |||||||||| |||||| ||| || ||||||||||||| ||||| ||||||| ||| ||||||||||||||||    
T  43393088 aactcatttaattattattttaataatttggtgtaccggtacactcaaattt-ttgagtgtaccatataattt 43393159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 5141017 - 5141075
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  5141017 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtgccatataatttgcc 5141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 6335524 - 6335477
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  6335524 ataagatttaattattatagttgtcaatgatagaaaataattattttt 6335477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 12336347 - 12336300
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  12336347 ataagatttaattattatagttgtcaatgatagaaaataattattttt 12336300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 13593554 - 13593601
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  13593554 ataagatttaattattatagttgtcaatgatagaaaataattattttt 13593601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 32993688 - 32993735
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  32993688 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 32993735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 43237697 - 43237759
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| |  |||||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  43237697 tattaatttaagaatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 2011324 - 2011378
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  2011324 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 2011378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 6447541 - 6447463
Alignment:
Q  569 ttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaaaaataaattctaaccactagactac 647  Q
    |||| |||||||  || |||||||||||| |||| | || ||||||||||||||||  || |||||||||||| |||||    
T  6447541 ttatatgcaggggccggggttcgaacctcggacaccccacttattcactttaaaaatgaatttctaaccactacactac 6447463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 9499368 - 9499314
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  9499368 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 9499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 9499528 - 9499474
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  9499528 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 9499474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 27116524 - 27116459
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    |||||||||  ||||| |||||||| |||||| ||||||| |||||||||||||| ||||| |||||    
T  27116524 tattaatttgttgattgggtgtaccaatacactcaaattt-ttgggtgtaccataaaattttccttt 27116459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 9589271 - 9589207
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| |||||||||||| || |||||| || || | |||||||||||||| ||||||||||    
T  9589271 tattaatttaatgatttggtgtgccaatacactcatatct-ttgggtgtaccatagaatttgcctt 9589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 21605710 - 21605650
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||    
T  21605710 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttg 21605650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 36339208 - 36339253
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  36339208 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 36339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 36409969 - 36409906
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| ||||||||    
T  36409969 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccataaaatttgcc 36409906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 1e-52; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 36569785 - 36569647
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  36569785 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 36569686  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36569685 atacacccaaatttattgggtgtaccatataatttgcct 36569647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 21515126 - 21514987
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  21515126 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 21515027  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  21515026 atacacccaaatttattgggtgtaccatagaatttgcctt 21514987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 45629245 - 45629107
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||||||    
T  45629245 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgtaccg 45629146  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  45629145 atacacccaaatttattgggtgtaccatagaatttgcct 45629107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 44998547 - 44998409
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||     
T  44998547 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttatgacttggtgtacca 44998449  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  44998448 atacacccaaatttattgggtgtaccatagaatttgcctt 44998409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 55 - 193
Target Start/End: Original strand, 10779261 - 10779399
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  10779261 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 10779360  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||| | ||||||| |||||||||    
T  10779361 atacacccaaatttattggatataccatagaatttgcct 10779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 24292114 - 24291978
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  24292114 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtacca 24292016  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24292015 atacacccaaatttattgggtgtaccatagaatttgcc 24291978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 33612657 - 33612521
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  33612657 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaattttacgacttggtgtaccgata 33612558  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  33612557 cacccaaattcattgggtgtaccatagaatttgcctt 33612521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 55 - 193
Target Start/End: Original strand, 16004803 - 16004941
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| | |||||    
T  16004803 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatataccg 16004902  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  16004903 atacacccaaatttattggatgtaccataaaatttgcct 16004941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 48549939 - 48550073
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  48549939 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 48550038  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || ||||||||||||||||||| ||| ||||||||    
T  48550039 catccaaatttattgggtgtacaatagaatttgcc 48550073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 23639508 - 23639639
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  23639508 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 23639607  T
Q  158 cacccaaatttattgggtgtaccatataattt 189  Q
    ||| |||||||||||| ||||||||| |||||    
T  23639608 cactcaaatttattggatgtaccatagaattt 23639639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 42244810 - 42244944
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| ||||||||||    
T  42244810 ataaaatttaattctcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccgata 42244909  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || ||||||||||||||||||||||| ||||||||    
T  42244910 catccaaatttattgggtgtaccatagaatttgcc 42244944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 46222262 - 46222403
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn--caactcatttattattaattttatgatttggtgtac 152  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||         ||||||||||||||||||||||| || |||||||||    
T  46222262 tatataaaattaaattatcttagttgtcaatgatagaaaataattgtttttcttcaaaaaaaaacaactcatttattattaattttacgacttggtgtac 46222361  T
Q  153 cgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  46222362 cgatacacccaaatttattgggtgtaccatagaatttgcctt 46222403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 46633875 - 46634009
Alignment:
Q  57 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccga 155  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||    
T  46633875 tataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggtgtaccga 46633974  T
Q  156 tacacccaaatttattgggtgtaccatataatttg 190  Q
    |||| ||||||||||||||||||||||| ||||||    
T  46633975 tacatccaaatttattgggtgtaccataaaatttg 46634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 27967647 - 27967507
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatga-tttggtgtacc 153  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| || || ||||||||    
T  27967647 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgacttgggtgtacc 27967548  T
Q  154 gatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  27967547 gatacacccaaatttattgggtgtaacatagaatttgcctt 27967507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 46630918 - 46631055
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa-ctcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || ||||||||||||||||| || || |||||||||||||    
T  46630918 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaactcatttattattaattgtacgacttggtgtaccgat 46631017  T
Q  157 acacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  46631018 acacccaaatttattgggtgtaccatagaattttcctt 46631055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 54499708 - 54499573
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  54499708 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtaccgata 54499610  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    || ||||||| | ||| ||||||||| ||||||||||    
T  54499609 catccaaattcactggatgtaccatagaatttgcctt 54499573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 38955312 - 38955453
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  38955312 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacca 38955411  T
Q  155 atacacccaaat--ttattgggtgtaccatataatttgcctt 194  Q
    |||||| |||||  || |||| ||||||||  ||||||||||    
T  38955412 atacactcaaattattgttggatgtaccatggaatttgcctt 38955453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 27635873 - 27635741
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||| ||||||||||||||||| | || ||||||||| ||||    
T  27635873 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaattcatttattattaatttaacgacttggtgtactgata 27635774  T
Q  158 cacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||||||||| ||||||| || ||||||    
T  27635773 cacccaaatttattgagtgtaccgtagaatttg 27635741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 52257266 - 52257130
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||| |  | |||||    
T  52257266 ataaaatttaattatcttagttatcaatgatagaaaataattatttttctttaaaaaaacaactcatttattattaattttacgacttgatacatcgata 52257167  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||||||||| | ||||||| ||||||||||    
T  52257166 cacccaaatttattggatataccatagaatttgcctt 52257130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 54505838 - 54505973
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||        ||||  ||||||||||||||| |  | |||||||||||||    
T  54505838 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaaccaatttattattaatttaacaaattggtgtaccgat 54505937  T
Q  157 acacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||| ||||||||    
T  54505938 acacccaaatttattgggtgtaccatagaatttgcc 54505973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 42680856 - 42680999
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| |||||||||||||||  |||||| |||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||| |    
T  42680856 ttgataaataaaatttaattattatagttgccaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtat 42680955  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||| ||||| | ||||||| | | |||||| || ||||||||||    
T  42680956 accaatacatctaaatttagtagatgtaccgtagaatttgcctt 42680999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 56016937 - 56016796
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| ||||||||||||||   ||||||||||| |||||||||||||||||||||||        |||||||||||||||||  | | || || ||||    
T  56016937 ttgataaataaaatttaattactatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaacctaacgacttagtgt 56016838  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||| |||||||||||| ||||||||| || |||||    
T  56016837 accgatacacacaaatttattggatgtaccataaaaattgcc 56016796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 2526305 - 2526171
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgta-ccgat 156  Q
    |||||||||||||||||||||||||||| ||| |||||||||| ||||||||       ||||||||||||||||||||||| ||   | |  | || ||    
T  2526305 ataaaatttaattatcttagttgtcaatgatataaaataattacttttcttcaaaaaaacaactcatttattattaattttacga-ccgatacacccaat 2526207  T
Q  157 acacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||| ||||||||    
T  2526206 acacccaaatttattgggtgtaccatagaatttgcc 2526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 23645231 - 23645297
Alignment:
Q  123 atttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 189  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||| |||||    
T  23645231 atttattattaattttacgacttggtgtaccgatacactcaaatttattggatgtaccatagaattt 23645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 45754518 - 45754468
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  45754518 tatataaaatttaattattttagttgtcaatgatagaaaataattattttt 45754468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 42080600 - 42080650
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 108  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  42080600 ataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 42080650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 10972959 - 10973008
Alignment:
Q  144 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  10972959 ttggtgtaccgatacacccaaatttattggatataccatagaatttgcct 10973008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 12756060 - 12756000
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||    
T  12756060 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcctt 12756000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 13548735 - 13548810
Alignment:
Q  117 caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| ||||||| |||| || |||||| ||||||||    
T  13548735 caactcatttaattattaatttaatgatttggtgtaccggtacactcaaattt-ttggatgcaccataaaatttgcc 13548810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 15640504 - 15640426
Alignment:
Q  569 ttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaaaaataaattctaaccactagactac 647  Q
    |||| ||||| ||||| ||||||||||||||||| | || |||||||||||||||   || ||||| ||||||||||||    
T  15640504 ttatatgcagtgttcggggttcgaacctcagacaccccacttattcactttaaaagtgaatttctagccactagactac 15640426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 16601724 - 16601633
Alignment:
Q  78 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaattt 168  Q
    |||||||| ||| ||||||||| |||||||||       ||||||||||| |||||||||| | |||||||||||||| ||||| |||||||    
T  16601724 ttgtcaatgataaaaaataattctttttcttcaaaaatacaactcatttaattattaatttaacgatttggtgtaccggtacactcaaattt 16601633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 36091121 - 36091056
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||| ||||||||||||||| |||||| || || | |||| |||||||||||||||||||||    
T  36091121 tattaatttaatgatttggtgtaccaatacactcatatct-ttggatgtaccatataatttgccttt 36091056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 44957267 - 44957323
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| ||||||    
T  44957267 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttg 44957323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 31681399 - 31681336
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||  |||||||||||||| ||||||| |||||| || ||||||||||| |||||||||    
T  31681399 tattaatttattgatttggtgtaccaatacaccaaaattt-ttaggtgtaccatagaatttgcct 31681336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 53936843 - 53936919
Alignment:
Q  117 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||  ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  53936843 caactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 53936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 3716387 - 3716325
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| ||||||||    
T  3716387 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 18425462 - 18425524
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| ||||||||    
T  18425462 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcc 18425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 30342887 - 30342825
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | ||||||||||||| |||||| |||||   |||||||||||||||||||||||    
T  30342887 tattaatttaaagatttggtgtaccaatacactcaaatgg-ttgggtgtaccatataatttgcc 30342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 39412442 - 39412493
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 109  Q
    |||| ||||||||||  ||||||||||| ||||||||||||| |||||||||    
T  39412442 ataagatttaattattatagttgtcaatgatagaaaataattttttttcttc 39412493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 40438983 - 40439041
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  40438983 aatttaatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 40439041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 50607729 - 50607682
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  50607729 gtgtaccggtacactcaaatatattgggtgtaccataaaatttgcctt 50607682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 1414443 - 1414508
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||| ||||||||||||||| |||||| ||||| | || ||||| ||||| |||||||||||    
T  1414443 tattaatttaatgatttggtgtaccaatacactcaaatct-ttaggtgtgccataaaatttgccttt 1414508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 23059131 - 23059173
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataattt 189  Q
    |||||||||||||| ||||| |||||||||||||||| |||||    
T  23059131 gtgtaccgatacactcaaatatattgggtgtaccatagaattt 23059173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 39103887 - 39103948
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||| ||||||| |||||||| ||||| ||||||| ||| |||||||||| |||||||||||    
T  39103887 aatttgatgatttagtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgccttt 39103948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 46216114 - 46216179
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||  ||||| |||||||| |||||| ||||||| |||||||||| ||| |||||||||    
T  46216114 attattaatttgttgattgggtgtaccaatacactcaaattt-ttgggtgtacaatagaatttgcct 46216179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 48647383 - 48647429
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  48647383 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 48647429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 56546510 - 56546432
Alignment:
Q  569 ttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaaaaataaattctaaccactagactac 647  Q
    |||| |||||||  || |||||||||| |||||| | || |||||||||||||||| | ||||||| ||||||| ||||    
T  56546510 ttatatgcaggggccggggttcgaaccacagacaccccacttattcactttaaaaagtgaattctagccactaggctac 56546432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 19842512 - 19842436
Alignment:
Q  118 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||| |||||||||| |  ||||||||||| | ||||| ||||||| |||| ||||||||| ||||||||||    
T  19842512 aactcatttaattattaatttaacaatttggtgtactggtacactcaaattt-ttggatgtaccatagaatttgcctt 19842436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 24535850 - 24535895
Alignment:
Q  150 taccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||| ||||| ||||| || |||||||||||||||||||||||||    
T  24535850 taccggtacactcaaatatagtgggtgtaccatataatttgccttt 24535895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 33491954 - 33492003
Alignment:
Q  144 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||| ||||| ||||| ||||||||||||| || |||||||||    
T  33491954 ttggtgtaccggtacactcaaatatattgggtgtaccgtagaatttgcct 33492003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 34280573 - 34280637
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| || |||||||    
T  34280573 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaacttgcctt 34280637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 50383691 - 50383736
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| ||||| ||||| |||||| ||||||||||||||||||    
T  50383691 gtgtaccggtacactcaaatatattggatgtaccatataatttgcc 50383736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 52324311 - 52324375
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| ||| |||||||||||| ||||| ||||  | |||||||||||||| ||||||||||    
T  52324311 tattaatttaatgctttggtgtaccggtacactcaaa-atgttgggtgtaccataaaatttgcctt 52324375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 24505260 - 24505123
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||||    
T  24505260 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 24505161  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24505160 atacacccaaatttattgggtgtaccatagaatttgcc 24505123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 15090802 - 15090667
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||    
T  15090802 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatgtattattaattttacgatttggtgtaccgata 15090703  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||||||||||||||| |||||||||    
T  15090702 cacccaaatttattgggtgtaccatagaatttgcct 15090667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 47220092 - 47219956
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||    
T  47220092 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaa-aactcatttattattaattttacgatttggtgtaccg 47219994  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  47219993 atacacccaaatttattgggtgtaccatagaatttgcc 47219956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 1282326 - 1282183
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||    
T  1282326 ttgataaataaaatttaattatcttagttctcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgt 1282227  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  1282226 accgatacacccaaatttattgggtgtaccatagaatttgcctt 1282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 45197070 - 45197212
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||    
T  45197070 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgt 45197169  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  45197170 accgatacatccaaatttattgggtgtaccatagaatttgcct 45197212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 3062034 - 3061902
Alignment:
Q  60 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 159  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||| || ||||||||||||||||    
T  3062034 aaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaataactcatttattattaattttacgacttggtgtaccgataca 3061935  T
Q  160 cccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||||||||||||||    
T  3061934 cccaaatttattgggtgtaccatataatttgcc 3061902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 25867039 - 25866905
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| ||||    
T  25867039 ataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtactgata 25866940  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||||||| ||||||||    
T  25866939 cacccaaatttattgggtgtaccatagaatttgcc 25866905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 32186698 - 32186832
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  32186698 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 32186797  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || ||||||||||||||||||| ||| ||||||||    
T  32186798 catccaaatttattgggtgtacaatagaatttgcc 32186832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 41715414 - 41715548
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  41715414 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 41715513  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || ||||||||||||||||||| ||| ||||||||    
T  41715514 catccaaatttattgggtgtacaatagaatttgcc 41715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 2038368 - 2038503
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  2038368 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 2038467  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||| ||||| ||||||||| |||||||||    
T  2038468 cacccaaattcattggatgtaccataaaatttgcct 2038503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 42039439 - 42039300
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | |||||||| ||    
T  42039439 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtatcg 42039340  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||| |||||| || ||||||||||    
T  42039339 atacacccaaatttattggatgtaccgtagaatttgcctt 42039300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 18922713 - 18922575
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||||||||    
T  18922713 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaataaaacaactaatttattattaattttacgacttggtgtaccg 18922614  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||  ||||| ||| |||||||||    
T  18922613 atacacccaaatttattgaatgtactatagaatttgcct 18922575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 42902659 - 42902801
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || |||||||||| |||    
T  42902659 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaacttatttattattaattttacgacttggtgtaccaata 42902758  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctttaataa 200  Q
    |||||||||||||| ||||||||||| |||||||||| |||||    
T  42902759 cacccaaatttattaggtgtaccatagaatttgccttaaataa 42902801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 47069234 - 47069368
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       || | ||||||||||||||||||||| ||||||||||||||    
T  47069234 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacatcccatttattattaattttatgacttggtgtaccgata 47069333  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || ||||||||||||| ||||||||| ||||||||    
T  47069334 catccaaatttattggatgtaccatagaatttgcc 47069368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 40947246 - 40947381
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||| | |||    
T  40947246 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgaattagtgtaacaata 40947345  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||||| ||||||||| |||||||||    
T  40947346 cacccaaatttattggatgtaccatagaatttgcct 40947381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 27130816 - 27130950
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 156  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||| |    
T  27130816 ataaaatttaattatattagttgt-aatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttatgacttggtgtaccggt 27130914  T
Q  157 acacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||| ||||||||    
T  27130915 acacccaaatttattgggtgtaccatagaatttgcc 27130950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 7574387 - 7574524
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||| | |  ||||||||||||||    
T  7574387 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaacggattggtgtaccgata 7574486  T
Q  158 cacccaaatttattgggtgtaccatataatttgccttt 195  Q
    || ||||||||||||| ||||||||| |||||||||||    
T  7574487 catccaaatttattggatgtaccatagaatttgccttt 7574524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 17334870 - 17334739
Alignment:
Q  60 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 159  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||       ||||| | |||||||||||||||  | ||||||||||| ||||    
T  17334870 aaaatttaattatcttagttgtcaatgatagaaaattattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccggtaca 17334771  T
Q  160 cccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| ||| ||||||||||| ||||||||    
T  17334770 cccaaattcatt-ggtgtaccatagaatttgcc 17334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 9923207 - 9923123
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaatttta 139  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  9923207 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaatttta 9923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 33704821 - 33704952
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||| | ||||||||    
T  33704821 ataaaatttaattatcttagttgccaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttgatataccgata 33704919  T
Q  158 cacccaaatttattgggtgtaccatataatttg 190  Q
    ||   ||||||||||| ||||||||| ||||||    
T  33704920 catataaatttattggatgtaccatagaatttg 33704952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 39444099 - 39444004
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 153  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||    
T  39444099 ataaaatataattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacc 39444004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 13806491 - 13806359
Alignment:
Q  63 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacc 161  Q
    ||||||||||  || |||||||| |||||||| || |||||||||||       |||||| |||| |||||||||| || |||||||||| || || ||     
T  13806491 atttaattattgtaattgtcaatgatagaaaacaaatatttttcttcaaaaaaacaactcgtttaattattaatttaataatttggtgtatcggtatact 13806392  T
Q  162 caaatttattgggtgtaccatataatttgccttt 195  Q
    |||||| ||||| |||||||||||||||||||||    
T  13806391 caaatt-attggatgtaccatataatttgccttt 13806359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 586 - 643
Target Start/End: Original strand, 20947812 - 20947869
Alignment:
Q  586 ggttcgaacctcagacatctcaattattcactttaaaaaataaattctaaccactaga 643  Q
    ||||||||| |||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  20947812 ggttcgaacttcagacatctcacttattcactttaaaaagtgaattctagccactaga 20947869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 9682357 - 9682432
Alignment:
Q  117 caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| ||||||| |||| || |||||| ||||||||    
T  9682357 caactcatttaattattaatttaatgatttggtgtaccggtacactcaaattt-ttggatgcaccataaaatttgcc 9682432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 406 - 466
Target Start/End: Original strand, 24454174 - 24454234
Alignment:
Q  406 tttgttcaagattattattgcatttcttttagtttttgttgtcattgatttgctccacaca 466  Q
    ||||| |||||||||||||||||| ||||| ||||| || | |||||||||||||||||||    
T  24454174 tttgtgcaagattattattgcattccttttggttttagtcgccattgatttgctccacaca 24454234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 1343150 - 1343018
Alignment:
Q  63 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn--caactcattta-ttattaattttatgatttggtgtaccgataca 159  Q
    ||||||||||  || |||||||| |||||||| ||||||||||||||         |||||| |||| ||||| |||| || ||||||||||||| ||||    
T  1343150 atttaattattgtaattgtcaatgatagaaaacaattatttttcttcaaaaaaaaacaactcgtttaattattgatttaataatttggtgtaccggtaca 1343051  T
Q  160 cccaaatttattgggtgtaccatataatttgcct 193  Q
    | |||| || |||||||||||||| |||||||||    
T  1343050 ctcaaa-ttgttgggtgtaccatagaatttgcct 1343018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 6791799 - 6791844
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  6791799 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 31743367 - 31743295
Alignment:
Q  124 tttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 197  Q
    |||| ||||||||| ||||||||||| || | ||||| ||||||| ||| |||||||||| |||||||||||||    
T  31743367 tttaatattaatttgatgatttggtgcactggtacactcaaattt-ttgagtgtaccatagaatttgcctttaa 31743295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 31760051 - 31759991
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  31760051 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccataaaatttgcctt 31759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 41913438 - 41913501
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||| |||||||||||||||||||    
T  41913438 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttggatgtaccatataatttgcct 41913501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 41968784 - 41968832
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    |||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  41968784 gtgtaccgatacactcaaatatattaggtgtaccatagaatttgccttt 41968832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 45857818 - 45857881
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| |||||||||    
T  45857818 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcct 45857881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 47369581 - 47369637
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataatat 203  Q
    ||||| || ||||| ||||| |||||||||||||||| |||||||||||||| ||||    
T  47369581 gtgtatcggtacactcaaatatattgggtgtaccatagaatttgcctttaattatat 47369637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 18990153 - 18990091
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||    
T  18990153 tattaatttattgatttggtgtaccaatacactcaaattt-tttggtgtaccatagaatttgcc 18990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 21920040 - 21920098
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  21920040 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 21920098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 27427405 - 27427452
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  27427405 ataagatttaattattatagttgtcaatgatagaaaataattattttt 27427452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 649
Target Start/End: Complemental strand, 32309213 - 32309127
Alignment:
Q  565 attgttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaaaaata--aattctaaccactagactactt 649  Q
    |||||||| ||||||| |||  ||||||| |||||||| | || |||||||| |||||||||   ||||||| ||||||||||||||    
T  32309213 attgttatatgcaggggtcggagttcgaatctcagacaccccagttattcaccttaaaaaatgtgaattctagccactagactactt 32309127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 36533409 - 36533452
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||    
T  36533409 gtgtaccggtacactcaaatatattgggtgtaccatataatttg 36533452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 44964165 - 44964227
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| |||||||| |||||| |||||| ||||| | || ||||||||||||||||||||    
T  44964165 tattaatttaatgatttgttgtaccaatacactcaaatct-ttaggtgtaccatataatttgcc 44964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 17340839 - 17340794
Alignment:
Q  146 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  17340839 ggtgtaccgatacacccaaattcatt-ggtgtaccatagaatttgcc 17340794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 41771770 - 41771816
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  41771770 gtgtaccggtacactcaaatatattgggtgtaccataaaatttgcct 41771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 46291461 - 46291503
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataattt 189  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  46291461 gtgtaccggtacactcaaatatattgggtgtaccatataattt 46291503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 17833989 - 17833929
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| |||||||||||| ||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  17833989 aatttgatgatttggtgtgccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 17833929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 27800384 - 27800436
Alignment:
Q  141 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||||||||| ||||| ||||||| |||| ||||||||| ||||||||||    
T  27800384 gatttggtgtaccggtacactcaaattt-ttggatgtaccatagaatttgcctt 27800436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 30624067 - 30624131
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| |  |||||||||||| |||||| |||||| ||||||||||||||| || |||||||    
T  30624067 tattaatttaaaaatttggtgtaccaatacactcaaatt-attgggtgtaccatagaacttgcctt 30624131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 31311480 - 31311386
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtgta 151  Q
    |||| ||||||||||  || |||||||| ||||||||||||| |||||||||       |||||||||| ||||||||||| | |||||| ||||    
T  31311480 ataagatttaattattataattgtcaatgatagaaaataattctttttcttcaaaaaaacaactcatttaattattaatttaacgatttgatgta 31311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 3e-50; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 33830667 - 33830529
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||       |||||||||||||||||||||||||| |||||||||||    
T  33830667 tatataaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 33830568  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  33830567 atacacccaaatttattgggtgtaccatagaatttgcct 33830529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 45927354 - 45927220
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||    
T  45927354 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgata 45927255  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||||||| ||||||||    
T  45927254 cacccaaatttattgggtgtaccataaaatttgcc 45927220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 2667621 - 2667482
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||       |||||||||||||||||||||||||| |||||||||||    
T  2667621 tatataaaatttaattatcttagttgtcaatgatagaaaataataatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 2667522  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  2667521 atacaccctaatttattgggtgtaccatagaatttgcctt 2667482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 52782429 - 52782568
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  52782429 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 52782528  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  52782529 atacacccaaatttattggatgtaccatagaatttgcctt 52782568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 53186141 - 53186000
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  53186141 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 53186042  T
Q  155 atacacccaaatttattgggtgtaccatataatttgccttta 196  Q
    ||||||||||||||||| |||||||| || ||||||||||||    
T  53186041 atacacccaaatttatttggtgtaccgtagaatttgccttta 53186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 9322699 - 9322841
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       |||||||||||||||| |||||| || |||||||    
T  9322699 ttgatatataaaatttaattatcttagttgtcaatgatataaaataattatttttcttcaaaaaaacaactcatttattatttattttacgacttggtgt 9322798  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  9322799 accgatacaccaaaatttattgggtgtaccatagaatttgcct 9322841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 44500385 - 44500527
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| || |||||||||||    
T  44500385 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 44500484  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctttaa 197  Q
    || |||||||||||||||||||||||||| |||||||||||||    
T  44500485 atgcacccaaatttattgggtgtaccatagaatttgcctttaa 44500527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 44962739 - 44962601
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  44962739 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacca 44962640  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  44962639 atacacccaaatttattggatgtaccatagaatttgcct 44962601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 37567355 - 37567218
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  37567355 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 37567256  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||| |||||||||||||||||||| || ||||||||    
T  37567255 atacatccaaatttattgggtgtaccgtagaatttgcc 37567218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 54009039 - 54008902
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  54009039 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 54008940  T
Q  158 cacccaaatttattgggtgtaccatataatttgccttt 195  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  54008939 cacccaaattcattgggtgtaccatagaatttgccttt 54008902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 57 - 193
Target Start/End: Original strand, 48925683 - 48925819
Alignment:
Q  57 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 156  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||||    
T  48925683 tataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgat 48925782  T
Q  157 acacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||  |||||||||||||||||||||| |||||||||    
T  48925783 acattcaaatttattgggtgtaccatagaatttgcct 48925819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 32720119 - 32719985
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  32720119 ataaaatttaattatcttaattgttaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 32720020  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||||||| ||||||||    
T  32720019 cacccaaatttattgggtgtaccatagaatttgcc 32719985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 1326735 - 1326599
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||  ||||||||||||||||    
T  1326735 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacaatttggtgtaccgata 1326636  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctt 194  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  1326635 catccaaattcattgggtgtaccatagaatttgcctt 1326599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 55 - 206
Target Start/End: Original strand, 49951195 - 49951346
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| ||| |||    
T  49951195 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtgccg 49951294  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctttaataatatgtg 206  Q
    ||||| ||||||||||| ||||||||||| |||||||| ||| | |||||||    
T  49951295 atacatccaaatttattaggtgtaccatagaatttgccattatttatatgtg 49951346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 55365647 - 55365783
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnnc-aactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||| || |||||||||||||    
T  55365647 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaataactcatttattattaattttacgacttggtgtaccgat 55365746  T
Q  157 acacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  55365747 acacccaaatttattggatgtaccatagaatttgcct 55365783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 48389031 - 48389166
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || |||||||| ||||    
T  48389031 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggtgtatcgat 48389130  T
Q  157 acacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||| ||||||||||||||||||||||| ||||||||    
T  48389131 acatccaaatttattgggtgtaccatagaatttgcc 48389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 346827 - 346689
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||       |||||||||||||||||||||||  | || ||||||||    
T  346827 tatatacaatttaattatcttagttgtcgatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttaccacttagtgtaccg 346728  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  346727 atacatccaaatttattgggtgtaccatagaatttgcct 346689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 50560634 - 50560768
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  50560634 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 50560733  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || | ||||||||||||| ||||||| || |||||    
T  50560734 catctaaatttattgggtttaccatagaacttgcc 50560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 53376728 - 53376604
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  53376728 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgaattggtgtactg 53376629  T
Q  155 atacacccaaatttattgggtgtac 179  Q
    ||||| ||||||||||||| |||||    
T  53376628 atacatccaaatttattggatgtac 53376604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 26409893 - 26410029
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||| ||||| |||||||||||||||||||||||       ||||| ||||||||||||||| |||| ||||||||||||||    
T  26409893 ataaaatttaattattatagtt-tcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 26409991  T
Q  158 cacccaaatttattgggtgtaccatataatttgccttt 195  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  26409992 cacccaaatttattggatgtaccataaaatttgccttt 26410029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 14460322 - 14460210
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||| |||||||||||||||| || |||||||    
T  14460322 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcttttattattaattttacgacttggtgt 14460223  T
Q  151 accgatacaccca 163  Q
    |||||||||||||    
T  14460222 accgatacaccca 14460210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 7157311 - 7157445
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||| | | ||     
T  7157311 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgcatcaatg 7157410  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||| ||||||||||||||| ||||||||    
T  7157411 cacccaaattcattgggtgtaccatagaatttgcc 7157445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 36019682 - 36019784
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||    
T  36019682 ttgatagataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgt 36019781  T
Q  151 acc 153  Q
    |||    
T  36019782 acc 36019784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 50465606 - 50465473
Alignment:
Q  58 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 156  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||||| ||       |||||||||||||||||||||||  | |||||||||||||    
T  50465606 ataaaatttaattatcttagttgtcaaatgatggaaaataattatttttcctcaaaaaaacaactcatttattattaattttacaacttggtgtaccgat 50465507  T
Q  157 acacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||||||||||  ||||||||| ||||||    
T  50465506 acacccaaatttattgaatgtaccataaaatttg 50465473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 48990449 - 48990351
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 153  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||||||||||    
T  48990449 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtacc 48990351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 52788755 - 52788832
Alignment:
Q  117 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  52788755 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcctt 52788832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 35320633 - 35320770
Alignment:
Q  58 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttctt-cnnnnnnncaactcatttattattaattttatgatttggtgtaccga 155  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||||| || |       ||| |||||||||| |||| ||| || ||||||||||||    
T  35320633 ataaaatttaattatcgtagttgtcaaatgatagaaaataattatttttttttcaaaaaaacaattcatttattactaatattacgacttggtgtaccga 35320732  T
Q  156 tacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  35320733 tacacccaaatttagtgggtgtaccatagaatttgcct 35320770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 54011217 - 54011141
Alignment:
Q  117 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  54011217 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtactatagaatttgcct 54011141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 51235658 - 51235558
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc--nnnnnnncaactcatttattattaattttatgatttggtgtac 152  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||          |||||||||||||||||||||| || |||||||||    
T  51235658 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaaactcatttattattaattttacgacttggtgtac 51235559  T
Q  153 c 153  Q
    |    
T  51235558 c 51235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 370 - 494
Target Start/End: Complemental strand, 21334734 - 21334607
Alignment:
Q  370 ttttcttcttttcattcctcattcatattg---tttaattttgttcaagattattattgcatttcttttagtttttgttgtcattgatttgctccacaca 466  Q
    |||||||||| || |||||| ||| |||||   |||| ||||||| ||||||||||||||||| ||||| ||||| |||| ||||| ||||||||| |||    
T  21334734 ttttcttcttctccttcctccttcgtattgctgtttacttttgtttaagattattattgcattccttttggttttggttgccattggtttgctccataca 21334635  T
Q  467 tcatgtaatggtgtaactctgtttgaat 494  Q
    ||| ||| ||| || |||||||||||||    
T  21334634 tcaagtattggcgtgactctgtttgaat 21334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 42622752 - 42622608
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta--ttattaattttatgatttggt 148  Q
    |||||| |||| |||||| |||  || ||||||||  ||||||||||||| ||||||||       |||||||||||  |||||||||| | ||||||||    
T  42622752 ttgataaataagatttaaatattataattgtcaatgctagaaaataattaattttcttcagaaaaacaactcatttaatttattaatttaacgatttggt 42622653  T
Q  149 gtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||| | ||||| ||| ||| |||||||||||||| |||||||||    
T  42622652 gtactggtacactcaatttttttgggtgtaccatagaatttgcct 42622608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 7347224 - 7347173
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 109  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  7347224 ataaaatttaattatcttagttgtcaatgatagaaagtaattatttttcttc 7347173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 881865 - 881808
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 108  Q
    |||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  881865 ttgataaataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 881808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 23043625 - 23043766
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||   |       ||||||||||||||||||| | |  | ||| |||||| |||    
T  23043625 ataaaatttaattattatagttgtcaatgatagaaaataattattttt-gacaaaaaaacaactcatttattattaatgtaacaacttgatgtaccaata 23043723  T
Q  158 cacccaaatttattgggtgtaccatataatttgcctttaataa 200  Q
    || | ||||||||||   ||||||||||||||||||| |||||    
T  23043724 catcaaaatttattgaaagtaccatataatttgccttaaataa 23043766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 26885302 - 26885379
Alignment:
Q  117 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||  ||||||||| | || ||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  26885302 caactcatttaactattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcct 26885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 38785426 - 38785488
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  38785426 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatataatttgcc 38785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 11140309 - 11140246
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||| |||||||||    
T  11140309 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcct 11140246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 31479630 - 31479559
Alignment:
Q  118 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 189  Q
    |||||||||| |||||||||| |  ||||||||||||||||||| ||||||| || |||||||||||||||||    
T  31479630 aactcatttaattattaatttaacaatttggtgtaccgatacactcaaattt-ttaggtgtaccatataattt 31479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 42364271 - 42364333
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| ||||||||    
T  42364271 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 876566 - 876631
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||| | ||||||||||||| ||||||  |||||  ||||||||||||||||||||||||||    
T  876566 tattaatttaaggatttggtgtaccaatacacttaaattg-ttgggtgtaccatataatttgccttt 876631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 36331787 - 36331709
Alignment:
Q  569 ttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaaaaataaattctaaccactagactac 647  Q
    |||| ||||||| ||| |||||||||| | |||| | || |||||||||||||||| | ||||||| ||||||||||||    
T  36331787 ttatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactagactac 36331709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 9506979 - 9506902
Alignment:
Q  117 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||  ||||||||| | || ||||||||||||| ||| ||||| ||||||||||| |||| |||||||||    
T  9506979 caactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9506902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 9514954 - 9514877
Alignment:
Q  117 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||  ||||||||| | || ||||||||||||| ||| ||||| ||||||||||| |||| |||||||||    
T  9514954 caactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 25482574 - 25482651
Alignment:
Q  117 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||  ||||||||| | || | ||||||||||||||| ||||| |||| |||||||| ||||||||||||    
T  25482574 caactcatttaactattaatttaaagaataggtgtaccgatacactcaaatatattaggtgtaccttataatttgcct 25482651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 29491726 - 29491661
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  29491726 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 29491661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 42622193 - 42622258
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  42622193 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcctt 42622258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 42067641 - 42067578
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| |||||||||    
T  42067641 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcct 42067578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 43715103 - 43715154
Alignment:
Q  140 tgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| |||||||||||||| |||| ||||||||| ||||||||    
T  43715103 tgatttggtgtaccaatacacccaaattt-ttggatgtaccatagaatttgcc 43715154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 52776795 - 52776862
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||||| || ||||||||||||| ||||| |||| ||||||||||||| ||| ||||| |||||    
T  52776795 attattaatttaataatttggtgtaccggtacactcaaa-ttattgggtgtacgatagaattttccttt 52776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 5328402 - 5328331
Alignment:
Q  400 tttaattttgttcaagattattattgcatttct-tttagtttttgttgtcattgatttgctccacacatcat 470  Q
    |||| ||||||| || |||||||||||||| || |||| |||| ||||||||||| ||||||||| ||||||    
T  5328402 tttacttttgtttaacattattattgcattcctatttatttttggttgtcattgacttgctccacgcatcat 5328331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 14998506 - 14998556
Alignment:
Q  141 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| ||||||||    
T  14998506 gatttggtgtaccggtacactcaaattt-ttgggtgtaccataaaatttgcc 14998556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 19547551 - 19547489
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||  ||||| ||||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  19547551 tattaatttgttgattgggtgtaccgatacactcaaattt-ttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 25592350 - 25592412
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||  |||||||||||| | |||||| ||||||| |||| ||||||||||||||||||    
T  25592350 tattaatttattgatttggtgtatcaatacactcaaattt-ttggatgtaccatataatttgcc 25592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 7352529 - 7352583
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataat 201  Q
    |||||||||||||| ||||| || ||| ||||||||| |||||||||| ||||||    
T  7352529 gtgtaccgatacactcaaatatagtggatgtaccatagaatttgccttaaataat 7352583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 20199487 - 20199433
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  20199487 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 20199433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 29347604 - 29347669
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||| |||||    
T  29347604 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttaccttt 29347669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 47175607 - 47175553
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  47175607 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 47175553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 23795837 - 23795788
Alignment:
Q  143 tttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||| ||||| |||| ||||||| ||| ||||||||    
T  23795837 tttggtgtaccgatacactcaaatatattaggtgtacgataaaatttgcc 23795788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 24170001 - 24169956
Alignment:
Q  146 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 191  Q
    ||||||||||||||| ||||| || ||||||||||||| |||||||    
T  24170001 ggtgtaccgatacactcaaatatactgggtgtaccataaaatttgc 24169956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 649
Target Start/End: Original strand, 26583135 - 26583218
Alignment:
Q  569 ttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaaaaata---aattctaaccactagactactt 649  Q
    |||| ||||||| ||| |||||||||  | |||| ||||||||||||  ||||||||||   |||||||||||||||| |||||    
T  26583135 ttatatgcaggggtcggggttcgaactacggacacctcaattattcatcttaaaaaatagtgaattctaaccactagattactt 26583218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 26849969 - 26849924
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| ||||| || ||||||||||||| ||||||||    
T  26849969 gtgtaccgatacactcaaatataatgggtgtaccatagaatttgcc 26849924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 40477820 - 40477759
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||    
T  40477820 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttg 40477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 46671382 - 46671337
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  46671382 gtgtaccggtacactcaaatatattgggtgtaccgtataatttgcc 46671337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 28897173 - 28897310
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||     
T  28897173 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtacca 28897272  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  28897273 atacacccaaatttattgggtgtaccatagaatttgcc 28897310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 45393716 - 45393855
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | |||||||||||    
T  45393716 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtaccg 45393815  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| ||||||||||||| ||||||||| ||||||||||    
T  45393816 atacatccaaatttattggatgtaccatagaatttgcctt 45393855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 37766572 - 37766706
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||| |||||    
T  37766572 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtataccg 37766671  T
Q  155 atacacccaaatttattgggtgtaccatataattt 189  Q
    ||||| ||||||||||| ||||||||||| |||||    
T  37766672 atacatccaaatttattaggtgtaccatagaattt 37766706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 21835566 - 21835430
Alignment:
Q  57 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||||    
T  21835566 tataaaatttaattatcttagttgccaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccgat 21835467  T
Q  157 acacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||| |||||||||||||||||| |||| |||||||||    
T  21835466 acagccaaatttattgggtgtaacatagaatttgcct 21835430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 37404875 - 37405010
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||||||    
T  37404875 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaagaactcatttattattaattttatgacttggtgtaccgata 37404974  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||| | | || |||| |||||||||    
T  37404975 cacccaaatttattagatatatcatagaatttgcct 37405010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 1426601 - 1426735
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  1426601 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgacttggtgtaccgata 1426700  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
     || |||||||||||||| ||||||| ||||||||    
T  1426701 tactcaaatttattgggtctaccatacaatttgcc 1426735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 36835483 - 36835345
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| |||||||||||||| || || |||||||    
T  36835483 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaacttatttattattaattgtacgacttggtgt 36835384  T
Q  151 accgatacacccaaatttattgggtgtaccatataattt 189  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  36835383 accgatacacccaaatttatttggtgtaccatagaattt 36835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 464383 - 464250
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa-ctcatttattattaattttatgatttggtgtaccgat 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || |||||||||||||||||||| || || ||||||||||    
T  464383 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaactcatttattattaattttacgagttagtgtaccgat 464284  T
Q  157 acacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||||||||||||||||||||| ||||||    
T  464283 acacccaaatttattgggtgtaccatagaatttg 464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 12266349 - 12266481
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| ||||||||||    
T  12266349 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgata 12266448  T
Q  158 cacccaaatttattgggtgtaccatataatttg 190  Q
    |||||||||| | ||||||||||||| ||||||    
T  12266449 cacccaaattcaatgggtgtaccatagaatttg 12266481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 45401285 - 45401146
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||| |||||||    
T  45401285 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttgatgtaccg 45401186  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| ||||||||||| | ||||||||| ||||| ||||    
T  45401185 atacatccaaatttattagatgtaccatagaatttacctt 45401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 196338 - 196471
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||||    
T  196338 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgata 196436  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
     ||| ||||||||||  ||||||||| ||||||||    
T  196437 aacctaaatttattgaatgtaccatagaatttgcc 196471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 311175 - 311308
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||||    
T  311175 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgata 311273  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
     ||| ||||||||||  ||||||||| ||||||||    
T  311274 aacctaaatttattgaatgtaccatagaatttgcc 311308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 29039885 - 29040019
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  ||||||||||| ||||||||||| |||||||||||       ||||| ||||||||||||||| |||| ||||||||||||||    
T  29039885 ataaaatttaattattatagttgtcaatgatagaaaataaatatttttcttcaaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 29039984  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| | ||||||||| ||||||||    
T  29039985 cacccaaatttatttgatgtaccatagaatttgcc 29040019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 38971601 - 38971453
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||  ||| || | |||||||||    
T  38971601 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaaacttacgactaggtgtaccg 38971502  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct-ttaataata 202  Q
    ||||| ||||||||||||| |||| | || ||||||||| |||||||||    
T  38971501 atacaaccaaatttattggatgtatcgtagaatttgcctcttaataata 38971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 39002699 - 39002551
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||  ||| || | |||||||||    
T  39002699 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaaacttacgactaggtgtaccg 39002600  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcct-ttaataata 202  Q
    ||||| ||||||||||||| |||| | || ||||||||| |||||||||    
T  39002599 atacaaccaaatttattggatgtatcgtagaatttgcctcttaataata 39002551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 7223620 - 7223511
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  7223620 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 7223521  T
Q  155 atacacccaa 164  Q
    ||||| ||||    
T  7223520 atacatccaa 7223511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 38803575 - 38803434
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 150  Q
    |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||     
T  38803575 ttgataaataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgc 38803476  T
Q  151 accgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| ||||||||||| |||||||  || ||||||||    
T  38803475 accgatacatccaaatttattaggtgtacagtagaatttgcc 38803434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 27101084 - 27101223
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 156  Q
    ||||||||||||||   ||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||| | || |||||||||||||    
T  27101084 ataaaatttaattactatagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaatttaacgacttggtgtaccgat 27101183  T
Q  157 acacccaaatttattgggtgtaccatataatttgccttta 196  Q
    ||||| ||||||||||| ||||||||| || |||||||||    
T  27101184 acacctaaatttattggatgtaccatagaaattgccttta 27101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 43182995 - 43183109
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || |||||||||||    
T  43182995 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccg 43183093  T
Q  155 atacacccaaatttat 170  Q
    |||||  |||||||||    
T  43183094 atacattcaaatttat 43183109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 38627124 - 38627026
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 153  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||    
T  38627124 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacc 38627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 3052933 - 3052799
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    ||||| |||||||||  ||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||| | || ||||||||||||||    
T  3052933 ataaagtttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactaatttattattaatttaacgaattggtgtaccgata 3052834  T
Q  158 cacccaaatttattgggtgtaccatataatttgcc 192  Q
    || ||||||||||||| | ||||||| ||||||||    
T  3052833 catccaaatttattggatataccatagaatttgcc 3052799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 29565687 - 29565756
Alignment:
Q  123 atttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29565687 atttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 29565756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 41571982 - 41572113
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||  || |||||||| |||||||||||||||| ||||||       ||||| ||||||||||||||| |  | || |||||||||||    
T  41571982 ataaaatttaattattataattgtcaatgatagaaaataattattcttcttcaaaaaa-caactaatttattattaatttaacaaattagtgtaccgata 41572080  T
Q  158 cacccaaatttattgggtgtaccatataatttg 190  Q
     | ||||||||||||||||||||||||||||||    
T  41572081 tatccaaatttattgggtgtaccatataatttg 41572113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 14914154 - 14914225
Alignment:
Q  126 tattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 197  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  14914154 tattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgccattaa 14914225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 58 - 169
Target Start/End: Original strand, 18844432 - 18844543
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    ||||||||||||||   ||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||| | || ||||||||||||||    
T  18844432 ataaaatttaattactatagttgtcaatgataaaaaataattatttttcttcaaaaaatcaactcatttattattaatttaacgacttggtgtaccgata 18844531  T
Q  158 cacccaaattta 169  Q
    |||  |||||||    
T  18844532 cacataaattta 18844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 622
Target Start/End: Complemental strand, 4955052 - 4954991
Alignment:
Q  561 atgtattgttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaa 622  Q
    |||||||||||| |||||||  ||||||||||||||||||||||  | ||||||||||||||    
T  4955052 atgtattgttatatgcaggggccgtggttcgaacctcagacatcctatttattcactttaaa 4954991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 14914114 - 14914155
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaata 96  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  14914114 tatataaaatttaattatcttagttgtcaatgatagaaaata 14914155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 26988749 - 26988797
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  26988749 gtgtaccgatacactcaaatatattgggtgtaccatataatttgtcttt 26988797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 19718693 - 19718758
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||| ||||||||||||||  |||||| ||||||| |||| ||||||||| |||||||||    
T  19718693 attattaatttaatgatttggtgtactaatacactcaaattt-ttggatgtaccatagaatttgcct 19718758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 1043121 - 1043060
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||| | || | ||||||||||||||| ||||| |||||||||||||||| ||||||    
T  1043121 tattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 12801157 - 12801106
Alignment:
Q  141 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| |||||||||    
T  12801157 gatttggtgtaccggtacactcaaattt-ttgggtgtaccatagaatttgcct 12801106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 15726234 - 15726297
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| |||||||||    
T  15726234 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcct 15726297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 29454553 - 29454617
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  29454553 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 29454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 29773507 - 29773444
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| |||||||||    
T  29773507 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcct 29773444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 2273072 - 2273010
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| ||||||||    
T  2273072 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcc 2273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 5982459 - 5982510
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 109  Q
    |||| ||||||||||  || |||||||| |||||||||||||||||||||||    
T  5982459 ataagatttaattattataattgtcaatgatagaaaataattatttttcttc 5982510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 28090254 - 28090192
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||| | ||||||||||||| ||| || |||||| ||||||||||||||| ||||||||    
T  28090254 tattaatttaaggatttggtgtaccaatatactcaaatt-attgggtgtaccatagaatttgcc 28090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 34058103 - 34058150
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  34058103 ataagatttaattattatagttgtcaatgatagaaaataattattttt 34058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 37676299 - 37676354
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataata 202  Q
    |||||||| ||||| ||||| || ||||||||||||| ||||||||||| ||||||    
T  37676299 gtgtaccggtacactcaaatatagtgggtgtaccatagaatttgccttttataata 37676354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 40154552 - 40154487
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| ||||||||||    
T  40154552 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccataaaatttgcctt 40154487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 43331877 - 43331830
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  43331877 ataagatttaattattatagttgtcaatgatagaaaataattattttt 43331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 44309699 - 44309652
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  44309699 ataagatttaattattatagttgtcaatgatagaaaataattattttt 44309652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 16323621 - 16323556
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    |||||||||  |||||||||||||| |||||| ||||| | ||||||||| |||| |||||||||||    
T  16323621 tattaatttattgatttggtgtaccaatacactcaaatct-ttgggtgtatcatagaatttgccttt 16323556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 17096624 - 17096688
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| |||||||||    
T  17096624 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccatagaatttgcct 17096688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 26522328 - 26522374
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||| ||||| ||||| || |||||||||||||||||||||||    
T  26522328 gtgtaccggtacactcaaatatagtgggtgtaccatataatttgcct 26522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 34047762 - 34047823
Alignment:
Q  130 attaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| || ||||||||||||| ||||| |||| || |||||||||||||| ||||||||    
T  34047762 attaatttaataatttggtgtaccggtacactcaaa-ttgttgggtgtaccatagaatttgcc 34047823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 41674624 - 41674570
Alignment:
Q  51 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 105  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  41674624 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 41674570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 43049598 - 43049537
Alignment:
Q  130 attaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||| ||||||||||||||| |||||  ||||||| |||| ||||||||| ||||||||    
T  43049598 attaatttaatgatttggtgtaccaatacattcaaattt-ttggatgtaccatagaatttgcc 43049537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 2261094 - 2261029
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||| | || | ||||||||| ||||| ||||| ||||| |||||||||| ||||||||    
T  2261094 attattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 2261029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 5215663 - 5215727
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||| ||| ||| |||||||||||||| ||||  ||||| |||||||||| ||||||||    
T  5215663 attattaatttaatgtttttgtgtaccgatacactcaaa-atattgagtgtaccataaaatttgcc 5215727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 5985885 - 5985812
Alignment:
Q  397 ttgtttaattttgttcaagattattattgcatttcttttag-tttttgttgtcattgatttgctccacacatca 469  Q
    ||||||| |||||||||||| |||||||||||| ||||  | ||||||||| ||| ||||| |||||| |||||    
T  5985885 ttgtttacttttgttcaagactattattgcattcctttaggttttttgttgccatcgattttctccacgcatca 5985812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 6631249 - 6631314
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| | || | ||| ||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  6631249 tattaatttaaagaatgggtataccggtacactcaaatatattgggtgtaccatagaatttgcctt 6631314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 6800116 - 6800180
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||  ||||||||||||||| |||||| ||||| | ||| |||||||||| ||||||||||    
T  6800116 tattaattcaatgatttggtgtaccaatacactcaaatct-ttgagtgtaccataaaatttgcctt 6800180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 17642136 - 17642072
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| ||||||||||||||| |||||| || || | |||| ||||||||| ||||||||||    
T  17642136 tattaatttaatgatttggtgtaccaatacactcatatct-ttggatgtaccatagaatttgcctt 17642072  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 23286627 - 23286563
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| | ||||||||||||| |||||| |||| || || ||||||||||| ||||||||||    
T  23286627 tattaatttaaggatttggtgtaccaatacacgcaaa-ttgttaggtgtaccatagaatttgcctt 23286563  T

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Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 32071586 - 32071650
Alignment:
Q  127 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||| | ||||| |||||||||| ||| ||||||| || ||||||||||| ||||||||    
T  32071586 attattaatttaacgatttcgtgtaccgattcactcaaattt-ttcggtgtaccataaaatttgcc 32071650  T

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Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 646
Target Start/End: Original strand, 33982220 - 33982301
Alignment:
Q  565 attgttatgtgcagggttcgtggttcgaacctcagacatctcaattattcactttaaaaaataaattctaaccactagacta 646  Q
    |||||||| ||||||| ||| |||||||||| |||||| | || |||||||||||| ||  | ||||||| ||| |||||||    
T  33982220 attgttatatgcaggggtcggggttcgaaccccagacaccgcacttattcactttataaggtgaattctagccaatagacta 33982301  T

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Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 37511150 - 37511086
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||  ||||||||||    
T  37511150 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatcgaatttgcctt 37511086  T

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Target: scaffold0022 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 166687 - 166827
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  166687 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 166786  T
Q  155 atacacccaaatttattgggtgtaccatataatttgccttt 195  Q
    ||||||||||||||||||  ||||||||| |||||||||||    
T  166787 atacacccaaatttattgaatgtaccatagaatttgccttt 166827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 13737 - 13602
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  13737 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 13638  T
Q  158 cacccaaatttattgggtgtaccatataatttgcct 193  Q
    |||||||||| ||||||||||||||| |||||||||    
T  13637 cacccaaattcattgggtgtaccatagaatttgcct 13602  T

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Target: scaffold1999 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold1999
Description:

Target: scaffold1999; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 1140 - 1003
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||| ||||||    
T  1140 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggagtaccg 1041  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||| | ||||||||| ||||||||    
T  1040 atacacccaaatttattagatgtaccataaaatttgcc 1003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 15512 - 15380
Alignment:
Q  60 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 159  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||| || ||||||||||||||||    
T  15512 aaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaataactcatttattattaattttacgacttggtgtaccgataca 15413  T
Q  160 cccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||||||||||||| ||||||||    
T  15412 cccaaatttattgggtgtaccatagaatttgcc 15380  T

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Target: scaffold0493 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 1519 - 1379
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaa--ttttatgatttggtgtac 152  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||| |  |||||||| |||||||||    
T  1519 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattatttaatttttatgacttggtgtac 1421  T
Q  153 cgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    | ||||||||||||||||||||||||||||| ||||||||||    
T  1420 caatacacccaaatttattgggtgtaccatagaatttgcctt 1379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 291760 - 291623
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||         | | ||||||||||||||||| ||||||||||||||    
T  291760 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaattatttatttattattaattttacgatttggtgtaccg 291661  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||||||||||||||  ||||||||| ||||||||    
T  291660 atacacccaaatttattgaatgtaccatagaatttgcc 291623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 17764 - 17900
Alignment:
Q  55 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | ||       ||||||||||||||||||||||| || ||||||||||     
T  17764 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttt-catcaaaaaaacaactcatttattattaattttacgacttggtgtacca 17862  T
Q  155 atacacccaaatttattgggtgtaccatataatttgcc 192  Q
    ||||||| ||||||||||| ||||||||| ||||||||    
T  17863 atacacctaaatttattggatgtaccatagaatttgcc 17900  T

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Target: scaffold0349 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 58 - 165
Target Start/End: Original strand, 8699 - 8806
Alignment:
Q  58 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 157  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  8699 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 8798  T
Q  158 cacccaaa 165  Q
    ||| ||||    
T  8799 cactcaaa 8806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 26974 - 27047
Alignment:
Q  117 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 190  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  26974 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttg 27047  T

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Target: scaffold0301 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 21563 - 21459
Alignment:
Q  87 atagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataa 186  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| |||| ||    
T  21563 atagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacaccc-aatttattgggtgta-catagaa 21466  T
Q  187 tttgcct 193  Q
    |||||||    
T  21465 tttgcct 21459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 16944 - 16989
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  16944 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 16989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 55900 - 55855
Alignment:
Q  147 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  55900 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 55855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 6607 - 6669
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 192  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||    
T  6607 tattaatttattgatttggtgtaccaatacactcaaattt-tttggtgtaccatagaatttgcc 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1844 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1844
Description:

Target: scaffold1844; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 1174 - 1114
Alignment:
Q  133 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 194  Q
    ||||| |||||||||||||||| ||||| ||||||| ||  |||||||||| ||||||||||    
T  1174 aatttgatgatttggtgtaccggtacactcaaattt-ttaagtgtaccatagaatttgcctt 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 3373 - 3442
Alignment:
Q  129 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaat 198  Q
    ||||||||| | || | ||||||| | ||||| ||||| |||||||||||||||| |||||||| |||||    
T  3373 tattaatttaaagagtaggtgtactggtacactcaaatatattgggtgtaccatagaatttgcccttaat 3442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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