View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10970_low_33 (Length: 240)
Name: NF10970_low_33
Description: NF10970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10970_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 51930702 - 51930943
Alignment:
| Q |
1 |
tagagtgacaacaatttctatattgggttagtctatagtactctacacatatatttgctctgactataactgaaacctcgttagtagaattggtccgcct |
100 |
Q |
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| T |
51930702 |
tagagtgacaacaatttctatattgggttagtctatagtactctacacatatatttgctctgactataactgaaacctcgttagtagaattggtccgcct |
51930801 |
T |
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| Q |
101 |
ttgagttggatacat--------------------aacactactcaacatatattttccagtaggataaagaaaaacatttacattaatgatagcaatat |
180 |
Q |
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| T |
51930802 |
ttgagttggatacatgaattggttagtttatagtgtactctactcaacatatattttccagtaagataaagaaaaacatttacattaaatatagcaatat |
51930901 |
T |
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| Q |
181 |
tcaaggttcacgtgaaaaatgaaattaacataacactacttc |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
51930902 |
tcaaggttcacgtgaaaaatgaaattaacataacactacttc |
51930943 |
T |
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