View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10970_low_8 (Length: 406)
Name: NF10970_low_8
Description: NF10970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10970_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 88 - 393
Target Start/End: Complemental strand, 47257400 - 47257095
Alignment:
| Q |
88 |
ctctttgtttcttcaaccttagtaactctttccataaaacagtgcactttggtggccttggtgatggatcatcatccacaaaccaatttactctactatt |
187 |
Q |
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| T |
47257400 |
ctctttgtttcttcaaccttagtaactctttccataaaacagtgcactttggtggccttggtgatggatcatcatccacaaaccaatttactctactatt |
47257301 |
T |
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| Q |
188 |
attattatcttctttgttgtccactaccacctcaatcacttcctcctcctcttcttctttgaggttgatcttgttgagtttctctagatgttgcatctgc |
287 |
Q |
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| T |
47257300 |
attattatcttctttgttgtccactaccacctcaatcacttcctcctcttcttcttctttgaggttgatcttgttgagtttctctagatgttgcatctgc |
47257201 |
T |
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| Q |
288 |
caaaagggaaggatttttccttcaaagaaaagttcatcagctgataaaactgtgtttttgtcacttatgttgatgtttgaaagaaactcaaactgatctg |
387 |
Q |
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| T |
47257200 |
caaaagggaaggatttttccttcaaagaaaagttcatcagctgataaaactgtgtttttgtcacttatgttgatgtttgaaagaaactcaaactgatctg |
47257101 |
T |
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| Q |
388 |
tgttct |
393 |
Q |
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|||||| |
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| T |
47257100 |
tgttct |
47257095 |
T |
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