View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10973_high_19 (Length: 217)
Name: NF10973_high_19
Description: NF10973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10973_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 8072689 - 8072879
Alignment:
| Q |
10 |
agatgaagagtacaataagaaccgaaaccaacaacaatttcaaatgcaactgcaaatgtttccaaatcatcagaaccataattatggaccgtcctcttct |
109 |
Q |
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| T |
8072689 |
agatgaagagtacaataagaaccaaaaccaacaacaatttcaaatgcaactgcaaatgtttccaaatcatcagaaccataattatggaccgtcctcttct |
8072788 |
T |
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| Q |
110 |
tctgttacattgggcatcaacatcaacaacaatgataataatggcctaatagctcttcctgatctgaactcaacagcagaagagttgatcg |
200 |
Q |
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| T |
8072789 |
tctgttacattgggcatcaacatcaacaacaatgataataatggcctaatagctcttcctgatctgaactcaacagcagaagagttgatcg |
8072879 |
T |
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