View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10975_low_6 (Length: 240)
Name: NF10975_low_6
Description: NF10975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10975_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 60 - 218
Target Start/End: Complemental strand, 3808921 - 3808763
Alignment:
| Q |
60 |
tcgacctctacatgagtaaatggcaagttatgttaagcttatcgcataattgatgtccaagaggatgacccttcgagtgttgctcaaaatctttgttaac |
159 |
Q |
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| T |
3808921 |
tcgacctctgcatgagtaaatggcaagttccgttaagcttatcgcataattgatgtccaagcggatgaccctttgagtgttgctcaaaatctttgttaac |
3808822 |
T |
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| Q |
160 |
nnnnnnncataattacaagctgcataaataaatatatagaaacttgcctaagttaagcc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3808821 |
aaaaaaacataattacaagctgcataaataaatatatagaaacttgcctaagttaagcc |
3808763 |
T |
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