View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10977_high_36 (Length: 241)

Name: NF10977_high_36
Description: NF10977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10977_high_36
NF10977_high_36
[»] chr4 (9 HSPs)
chr4 (126-223)||(14021817-14021914)
chr4 (126-223)||(10533113-10533199)
chr4 (126-163)||(9320353-9320390)
chr4 (126-223)||(17806153-17806239)
chr4 (126-163)||(21526181-21526218)
chr4 (126-163)||(26607799-26607836)
chr4 (126-162)||(43366632-43366668)
chr4 (178-215)||(26607759-26607796)
chr4 (174-222)||(54480286-54480335)
[»] chr5 (10 HSPs)
chr5 (126-223)||(35824267-35824365)
chr5 (126-215)||(27856378-27856455)
chr5 (145-223)||(35100890-35100969)
chr5 (177-215)||(18275447-18275485)
chr5 (126-160)||(21581849-21581883)
chr5 (126-163)||(15437845-15437882)
chr5 (174-215)||(15437881-15437922)
chr5 (174-215)||(32240358-32240399)
chr5 (126-163)||(32859017-32859054)
chr5 (178-210)||(2003560-2003592)
[»] chr8 (12 HSPs)
chr8 (135-203)||(38525864-38525932)
chr8 (171-223)||(284204-284257)
chr8 (171-223)||(631620-631673)
chr8 (171-223)||(817432-817485)
chr8 (131-223)||(18431952-18432032)
chr8 (126-163)||(8386902-8386939)
chr8 (174-223)||(10608702-10608752)
chr8 (127-209)||(41322241-41322323)
chr8 (122-163)||(6073638-6073679)
chr8 (178-215)||(40112288-40112325)
chr8 (126-163)||(40112328-40112365)
chr8 (131-163)||(5801951-5801983)
[»] chr3 (4 HSPs)
chr3 (123-163)||(11569527-11569567)
chr3 (126-223)||(51241070-51241156)
chr3 (174-223)||(28710490-28710540)
chr3 (126-163)||(28710539-28710576)
[»] chr7 (7 HSPs)
chr7 (174-223)||(8072067-8072117)
chr7 (126-163)||(319184-319221)
chr7 (174-215)||(8454579-8454620)
chr7 (174-223)||(37648467-37648517)
chr7 (122-163)||(8454619-8454660)
chr7 (134-163)||(25415646-25415675)
chr7 (126-158)||(8072031-8072063)
[»] chr6 (5 HSPs)
chr6 (174-223)||(2367651-2367701)
chr6 (126-163)||(2367700-2367737)
chr6 (174-215)||(9875025-9875066)
chr6 (174-215)||(29608936-29608977)
chr6 (126-163)||(33021213-33021250)
[»] scaffold0472 (1 HSPs)
scaffold0472 (174-215)||(12563-12604)
[»] chr2 (4 HSPs)
chr2 (130-163)||(3943751-3943784)
chr2 (121-163)||(43032618-43032660)
chr2 (174-223)||(43032659-43032709)
chr2 (174-215)||(4987937-4987978)
[»] chr1 (7 HSPs)
chr1 (126-223)||(29172641-29172727)
chr1 (174-223)||(933179-933229)
chr1 (174-216)||(15964978-15965020)
chr1 (126-163)||(933228-933265)
chr1 (178-215)||(1748522-1748559)
chr1 (126-163)||(6342121-6342158)
chr1 (131-163)||(1748562-1748594)


Alignment Details
Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 14021914 - 14021817
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttcaaaagcgggtgc 223  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  14021914 taaagagtaataatatattaaattaggttggtgcttatttgacagaaaatgaaaataagattataaaatttgataaggtaaatttcaaaagcgggtgc 14021817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 10533199 - 10533113
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||| |||||||||||||||||||||||||||||||||            ||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  10533199 taaagagtaataatatattaaaataggttggtgcttat------------ggaaataagattataaaatttaataaagtaaatttcaaaaagcgggtgc 10533113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 9320390 - 9320353
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||||||||||||||||    
T  9320390 taaagagtaataatatattaaaataggttggtgcttat 9320353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 17806153 - 17806239
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||| |||||||||||||||||||||||||||||||||            ||||||||||||||| | |||||||| ||||||||| ||||||||||||    
T  17806153 taaagagtaataatatattaaaataggttggtgcttat------------ggaaataagattataaattttaataaagtaaatttcaaaaagcgggtgc 17806239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 21526218 - 21526181
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21526218 taaagagtaataatatattaaaataggttggtgcttat 21526181  T

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Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 26607836 - 26607799
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||||||||||||||||    
T  26607836 taaagagtaataatatattaaaataggttggtgcttat 26607799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 43366632 - 43366668
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgctta 162  Q
    |||| ||||||||||||||||||||||||||||||||    
T  43366632 taaagagtaataatatattaaaataggttggtgctta 43366668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 26607796 - 26607759
Alignment:
Q  178 aaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  26607796 aaataagattataaaatttaataaagtaaatttcaaaa 26607759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 54480335 - 54480286
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaa-tttcaaaagcgggtg 222  Q
    ||||||||||||||||| |||||||||| ||||| ||| |||||||||||    
T  54480335 atggaaataagattataaaatttaataaagtaaactttaaaaagcgggtg 54480286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 35824267 - 35824365
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||||| ||||||||||||    
T  35824267 taaagagtaataatatattaaaacaggttggtacttatttgacagaaaatggaaataaaattataaaatttaataaagtaaatttcaaaaagcgggtgc 35824365  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 27856378 - 27856455
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    |||| |||||||||||||||||||||||||||||||            ||||||||||||||||| |||||||||| |||||||||||||    
T  27856378 taaagagtaataatatattaaaataggttggtgctt------------atggaaataagattataaaatttaataaagtaaatttcaaaa 27856455  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 35100969 - 35100890
Alignment:
Q  145 aaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttcaa-aagcgggtgc 223  Q
    ||||||| ||| | ||||||||||| ||||| | |||||||||||  ||||||||||| |||||||||| ||||||||||    
T  35100969 aaaatagtttgatacttatttgacacaaaataggaataagattattaaatttaataagataaatttcaataagcgggtgc 35100890  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 18275485 - 18275447
Alignment:
Q  177 gaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  18275485 gaaataagattataaaatttaataaagtaaatttcaaaa 18275447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 21581883 - 21581849
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgct 160  Q
    |||| ||||||||||||||||||||||||||||||    
T  21581883 taaagagtaataatatattaaaataggttggtgct 21581849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 15437845 - 15437882
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  15437845 taaagagtaataatatattaaaataggttgatgcttat 15437882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 15437881 - 15437922
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    |||||||||| |||||| |||||||||| |||||||||||||    
T  15437881 atggaaataaaattataaaatttaataaagtaaatttcaaaa 15437922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 32240358 - 32240399
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    |||||||||| |||||| |||||||||| |||||||||||||    
T  32240358 atggaaataaaattataaaatttaataaagtaaatttcaaaa 32240399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 32859054 - 32859017
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  32859054 taaagagtaataatatattaaaataggttggggcttat 32859017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 2003592 - 2003560
Alignment:
Q  178 aaataagattatacaatttaataaggtaaattt 210  Q
    |||||||||||||||||||||||||||| ||||    
T  2003592 aaataagattatacaatttaataaggtagattt 2003560  T

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Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 38525864 - 38525932
Alignment:
Q  135 ataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataagg 203  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  38525864 ataatatattaaaataagttggtgcttatttgacagaaaatgaaaataagattataaaatttaataagg 38525932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 284204 - 284257
Alignment:
Q  171 aaaatggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  284204 aaaatggaaataagattataaaatttaataaagtaaatttcaaaaagcgggtgc 284257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 631673 - 631620
Alignment:
Q  171 aaaatggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  631673 aaaatggaaataagattataaaatttaataaagtaaatttcaaaaagcgggtgc 631620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 817485 - 817432
Alignment:
Q  171 aaaatggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  817485 aaaatggaaataagattataaaatttaataaagtaaatttcaaaaagcgggtgc 817432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 18432032 - 18431952
Alignment:
Q  131 agtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttcaaaagcgggtgc 223  Q
    |||||||||||||||||||||||||||||||||            ||||||||||||||| ||||||| || ||||||||||||||| |||||    
T  18432032 agtaataatatattaaaataggttggtgcttat------------ggaaataagattataaaatttaaaaaagtaaatttcaaaagcaggtgc 18431952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 8386939 - 8386902
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||||||||||||||||    
T  8386939 taaagagtaataatatattaaaataggttggtgcttat 8386902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 10608702 - 10608752
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaa-tttcaaaagcgggtgc 223  Q
    ||||||||||||||||| |||||||||| ||||| ||| ||||||||||||    
T  10608702 atggaaataagattataaaatttaataaagtaaattttaaaaagcgggtgc 10608752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 41322241 - 41322323
Alignment:
Q  127 aaatagtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatt 209  Q
    ||||| ||| |||||| |||||||| ||  |  |||||| |||||||||||||||||||||||  |||||| ||| |||||||    
T  41322241 aaataataacaatatactaaaatagtttaatatttattttacagaaaatggaaataagattattaaatttattaatgtaaatt 41322323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 6073638 - 6073679
Alignment:
Q  122 tttttaaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||||||| |||||||| |||||||||||||||||| |||||    
T  6073638 tttttaaagagtaataaaatattaaaataggttggttcttat 6073679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 40112325 - 40112288
Alignment:
Q  178 aaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  40112325 aaataagattataaaatttaataaagtaaatttcaaaa 40112288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 40112365 - 40112328
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  40112365 taaagagtaataatatattaaaataggttcgtgcttat 40112328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 5801983 - 5801951
Alignment:
Q  131 agtaataatatattaaaataggttggtgcttat 163  Q
    ||||||||||||||||||||||||||| |||||    
T  5801983 agtaataatatattaaaataggttggtacttat 5801951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 11569527 - 11569567
Alignment:
Q  123 ttttaaatagtaataatatattaaaataggttggtgcttat 163  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11569527 ttttaaagagtaataatatattaaaataggttggtgcttat 11569567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 51241070 - 51241156
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||| |||||||||||||||||||||||||||||||            | ||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  51241070 taaagagtaataatatattaaaataggttggtgctt------------aaggaaataagattataaaatttaataaagtaaatttcaaaaagcgggtgc 51241156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 28710540 - 28710490
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaa-agcgggtgc 223  Q
    ||||||||| ||||||| |||| |||||||||||||||||| |||||||||    
T  28710540 atggaaatatgattataaaattaaataaggtaaatttcaaacagcgggtgc 28710490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 28710576 - 28710539
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  28710576 taaagagtaataatatattaaaatagcttggtgcttat 28710539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 8072067 - 8072117
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaattt-caaaagcgggtgc 223  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  8072067 atggaaataagattataaaatttaataaagtaaatttccaaaagcgggtgc 8072117  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 319184 - 319221
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||||||||||||||||    
T  319184 taaagagtaataatatattaaaataggttggtgcttat 319221  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 8454620 - 8454579
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  8454620 atggaaataagattataaaatttaataaagtaaatttcaaaa 8454579  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 37648517 - 37648467
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaa-tttcaaaagcgggtgc 223  Q
    ||||||||||||||||| |||||||||| ||||| ||| ||||||||||||    
T  37648517 atggaaataagattataaaatttaataaagtaaattttaaaaagcgggtgc 37648467  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 8454660 - 8454619
Alignment:
Q  122 tttttaaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| ||| |||||||||||||||||| ||||||||||||||    
T  8454660 ttttcaaagagtaataatatattaaaacaggttggtgcttat 8454619  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 25415646 - 25415675
Alignment:
Q  134 aataatatattaaaataggttggtgcttat 163  Q
    ||||||||||||||||||||||||||||||    
T  25415646 aataatatattaaaataggttggtgcttat 25415675  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 8072031 - 8072063
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtg 158  Q
    |||| ||||||||||||||||||||||||||||    
T  8072031 taaagagtaataatatattaaaataggttggtg 8072063  T

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Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 2367701 - 2367651
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  2367701 atggaaataagattataaaatttaataaagtaaatttcaaaaagcgggtgc 2367651  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 2367737 - 2367700
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  2367737 taaagagtaataatatattaaaatagtttggtgcttat 2367700  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 9875066 - 9875025
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    ||||||||||||||||  |||||||||| |||||||||||||    
T  9875066 atggaaataagattatgaaatttaataaagtaaatttcaaaa 9875025  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 29608977 - 29608936
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    ||||||||||| ||||| |||||||||| |||||||||||||    
T  29608977 atggaaataagtttataaaatttaataaagtaaatttcaaaa 29608936  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 33021250 - 33021213
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  33021250 taaagagtaataatatattaaaatatgttggtgcttat 33021213  T

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Target: scaffold0472 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 12604 - 12563
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  12604 atggaaataagattataaaatttaataaagtaaatttcaaaa 12563  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 3943784 - 3943751
Alignment:
Q  130 tagtaataatatattaaaataggttggtgcttat 163  Q
    ||||||||||||||||||||||||||||||||||    
T  3943784 tagtaataatatattaaaataggttggtgcttat 3943751  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 43032618 - 43032660
Alignment:
Q  121 atttttaaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||| |||||||||||||||||||||||| ||||||||    
T  43032618 atttctaaagagtaataatatattaaaataggttagtgcttat 43032660  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 43032659 - 43032709
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||| |||||||||||| |||||||||| ||||||||| ||||||||||||    
T  43032659 atgggaataagattataaaatttaataaagtaaatttcaaaaagcgggtgc 43032709  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 4987978 - 4987937
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    |||||||||| |||||| |||||||||| |||||||||||||    
T  4987978 atggaaataaaattataaaatttaataaagtaaatttcaaaa 4987937  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 29172641 - 29172727
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttatttgacagaaaatggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    |||| |||||||||||||||||||||||||||||||||            ||||||||||||||| ||| |||||| ||||||||| ||||||||||||    
T  29172641 taaagagtaataatatattaaaataggttggtgcttat------------ggaaataagattataaaatataataaagtaaatttcaaaaagcgggtgc 29172727  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 933229 - 933179
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttc-aaaagcgggtgc 223  Q
    ||||||||||||||||| |||||||||| ||||||| | ||||||||||||    
T  933229 atggaaataagattataaaatttaataaagtaaattccaaaaagcgggtgc 933179  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 15964978 - 15965020
Alignment:
Q  174 atggaaataagattatacaatttaataaggtaaatttcaaaag 216  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||    
T  15964978 atggaaataagattataaaatttaataaagtaaaattcaaaag 15965020  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 933265 - 933228
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  933265 taaagagtaataatatattaaaataggttgatgcttat 933228  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 1748559 - 1748522
Alignment:
Q  178 aaataagattatacaatttaataaggtaaatttcaaaa 215  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  1748559 aaataagattataaaatttaataaagtaaatttcaaaa 1748522  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 6342121 - 6342158
Alignment:
Q  126 taaatagtaataatatattaaaataggttggtgcttat 163  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  6342121 taaaaagtaataatatattaaaatatgttggtgcttat 6342158  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 1748594 - 1748562
Alignment:
Q  131 agtaataatatattaaaataggttggtgcttat 163  Q
    ||||||||||||||||||||||||||| |||||    
T  1748594 agtaataatatattaaaataggttggtacttat 1748562  T

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