View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10977_low_10 (Length: 567)

Name: NF10977_low_10
Description: NF10977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10977_low_10
NF10977_low_10
[»] chr7 (26 HSPs)
chr7 (17-557)||(32817776-32818318)
chr7 (83-562)||(9736792-9737262)
chr7 (68-446)||(14644454-14644836)
chr7 (68-425)||(14634776-14635136)
chr7 (125-434)||(33292165-33292478)
chr7 (83-446)||(15947349-15947714)
chr7 (178-413)||(11634340-11634576)
chr7 (284-460)||(13874433-13874610)
chr7 (180-446)||(15174481-15174751)
chr7 (180-434)||(7592947-7593205)
chr7 (402-557)||(28344230-28344379)
chr7 (83-263)||(28344053-28344232)
chr7 (301-446)||(48709984-48710131)
chr7 (149-305)||(48711401-48711557)
chr7 (43-151)||(28343972-28344079)
chr7 (158-397)||(4306585-4306821)
chr7 (470-556)||(48709852-48709938)
chr7 (43-161)||(9736710-9736828)
chr7 (246-423)||(19352589-19352768)
chr7 (470-562)||(48709726-48709820)
chr7 (69-151)||(33292492-33292574)
chr7 (172-209)||(14777359-14777396)
chr7 (172-209)||(15229497-15229534)
chr7 (503-562)||(15947218-15947277)
chr7 (68-151)||(15947688-15947771)
chr7 (507-557)||(5293070-5293120)
[»] chr4 (22 HSPs)
chr4 (18-556)||(50516361-50516900)
chr4 (83-562)||(11482162-11482645)
chr4 (83-425)||(20884447-20884790)
chr4 (180-450)||(26812449-26812723)
chr4 (180-434)||(3242276-3242534)
chr4 (180-434)||(26821916-26822174)
chr4 (180-446)||(37059027-37059297)
chr4 (180-446)||(54689889-54690160)
chr4 (180-446)||(54699320-54699591)
chr4 (180-446)||(3918007-3918278)
chr4 (180-446)||(15842875-15843145)
chr4 (158-390)||(23622850-23623070)
chr4 (43-151)||(11482080-11482188)
chr4 (218-303)||(18125530-18125616)
chr4 (503-562)||(20884321-20884380)
chr4 (68-151)||(20884764-20884847)
chr4 (158-300)||(41902641-41902782)
chr4 (169-209)||(16490047-16490087)
chr4 (215-305)||(21667754-21667845)
chr4 (215-305)||(21676518-21676609)
chr4 (341-388)||(45609551-45609598)
chr4 (341-385)||(41902572-41902616)
[»] chr8 (44 HSPs)
chr8 (83-562)||(42712033-42712518)
chr8 (83-562)||(20030026-20030505)
chr8 (121-482)||(20044701-20045064)
chr8 (43-446)||(12767438-12767843)
chr8 (83-446)||(12925200-12925565)
chr8 (151-557)||(31575272-31575681)
chr8 (178-425)||(18143427-18143675)
chr8 (178-423)||(25037026-25037272)
chr8 (178-423)||(25051063-25051309)
chr8 (178-420)||(18883163-18883406)
chr8 (178-425)||(4843720-4843970)
chr8 (178-413)||(18251770-18252006)
chr8 (178-413)||(18232868-18233104)
chr8 (178-413)||(18242319-18242555)
chr8 (277-446)||(12915499-12915668)
chr8 (180-446)||(20714010-20714280)
chr8 (180-429)||(7789072-7789325)
chr8 (284-446)||(33601750-33601913)
chr8 (284-446)||(33592111-33592274)
chr8 (284-413)||(24634015-24634145)
chr8 (284-390)||(42896183-42896289)
chr8 (430-562)||(12767861-12767993)
chr8 (470-562)||(26193875-26193967)
chr8 (359-425)||(20714417-20714484)
chr8 (218-422)||(15833931-15834137)
chr8 (486-562)||(20047441-20047517)
chr8 (43-151)||(20029944-20030052)
chr8 (489-562)||(24095963-24096038)
chr8 (341-421)||(24096077-24096159)
chr8 (43-151)||(42712492-42712600)
chr8 (68-151)||(12925143-12925226)
chr8 (16-77)||(24633851-24633912)
chr8 (163-211)||(24633960-24634008)
chr8 (503-562)||(12915718-12915777)
chr8 (502-556)||(18143274-18143328)
chr8 (363-420)||(26194048-26194106)
chr8 (502-562)||(18883006-18883066)
chr8 (151-206)||(33592287-33592343)
chr8 (17-77)||(33592378-33592438)
chr8 (151-206)||(33601926-33601982)
chr8 (17-77)||(33602017-33602077)
chr8 (151-206)||(42896302-42896358)
chr8 (17-77)||(42896393-42896453)
chr8 (459-521)||(7788985-7789049)
[»] chr5 (45 HSPs)
chr5 (83-562)||(11223223-11223705)
chr5 (151-557)||(42732445-42732847)
chr5 (83-446)||(33955476-33955840)
chr5 (83-446)||(20035846-20036210)
chr5 (83-419)||(20834277-20834614)
chr5 (178-425)||(13815371-13815619)
chr5 (151-446)||(26652536-26652829)
chr5 (151-446)||(26924121-26924414)
chr5 (178-413)||(24244053-24244289)
chr5 (178-413)||(24290677-24290913)
chr5 (180-446)||(22489126-22489396)
chr5 (180-434)||(24412769-24413027)
chr5 (180-446)||(24422218-24422488)
chr5 (180-446)||(30459236-30459506)
chr5 (287-446)||(22448307-22448467)
chr5 (180-446)||(30454178-30454448)
chr5 (180-446)||(18568979-18569251)
chr5 (180-446)||(30444806-30445076)
chr5 (180-446)||(4635886-4636156)
chr5 (43-151)||(11223142-11223249)
chr5 (218-392)||(22118134-22118310)
chr5 (172-390)||(31150669-31150876)
chr5 (172-390)||(5600524-5600731)
chr5 (172-390)||(5610170-5610377)
chr5 (470-557)||(26652879-26652968)
chr5 (470-557)||(26924464-26924553)
chr5 (43-151)||(20035764-20035872)
chr5 (284-351)||(22457720-22457788)
chr5 (341-426)||(37514856-37514942)
chr5 (68-151)||(33955814-33955897)
chr5 (470-557)||(22117913-22118002)
chr5 (151-210)||(22448478-22448538)
chr5 (151-210)||(22457796-22457856)
chr5 (17-77)||(22457891-22457951)
chr5 (17-77)||(22448573-22448633)
chr5 (29-76)||(26652449-26652496)
chr5 (29-76)||(26924034-26924081)
chr5 (503-562)||(33955349-33955408)
chr5 (354-390)||(16111002-16111038)
chr5 (172-208)||(17553997-17554033)
chr5 (367-446)||(22457643-22457723)
chr5 (503-562)||(20038476-20038535)
chr5 (68-151)||(20834220-20834303)
chr5 (216-317)||(16110860-16110962)
chr5 (343-388)||(17553829-17553874)
[»] scaffold0206 (2 HSPs)
scaffold0206 (83-562)||(1956-2435)
scaffold0206 (43-151)||(1874-1982)
[»] chr6 (18 HSPs)
chr6 (87-556)||(17512088-17512560)
chr6 (124-425)||(22066178-22066482)
chr6 (124-421)||(23884377-23884677)
chr6 (180-434)||(23895605-23895863)
chr6 (243-557)||(14102312-14102624)
chr6 (180-444)||(18420492-18420760)
chr6 (265-557)||(11421322-11421611)
chr6 (413-562)||(2850629-2850782)
chr6 (440-562)||(8668629-8668751)
chr6 (43-136)||(17512553-17512646)
chr6 (260-423)||(10259779-10259944)
chr6 (151-314)||(13218265-13218429)
chr6 (218-429)||(12173401-12173614)
chr6 (243-387)||(23110256-23110401)
chr6 (281-388)||(24564649-24564756)
chr6 (158-209)||(12414995-12415045)
chr6 (68-151)||(23884281-23884364)
chr6 (68-150)||(22066082-22066164)
[»] chr2 (19 HSPs)
chr2 (121-562)||(35877399-35877852)
chr2 (121-562)||(35884888-35885341)
chr2 (121-562)||(36724601-36725054)
chr2 (121-446)||(3396806-3397134)
chr2 (178-557)||(14273144-14273521)
chr2 (180-446)||(31710443-31710713)
chr2 (180-446)||(24022719-24022989)
chr2 (172-390)||(22632346-22632553)
chr2 (172-390)||(1800437-1800644)
chr2 (172-390)||(1790943-1791146)
chr2 (43-150)||(3396688-3396795)
chr2 (340-411)||(16446667-16446739)
chr2 (354-429)||(29911278-29911354)
chr2 (260-427)||(18578708-18578877)
chr2 (43-151)||(35877281-35877389)
chr2 (43-151)||(35884770-35884878)
chr2 (43-151)||(36724483-36724591)
chr2 (483-556)||(16446743-16446817)
chr2 (503-562)||(3397214-3397273)
[»] chr3 (31 HSPs)
chr3 (83-562)||(13328139-13328617)
chr3 (43-498)||(23486848-23487303)
chr3 (83-446)||(46305550-46305913)
chr3 (83-420)||(5385537-5385874)
chr3 (180-450)||(28367626-28367900)
chr3 (180-434)||(24794535-24794793)
chr3 (180-434)||(28375460-28375718)
chr3 (180-434)||(28383282-28383540)
chr3 (180-434)||(28351709-28351967)
chr3 (180-446)||(38529154-38529424)
chr3 (182-426)||(4951537-4951784)
chr3 (470-557)||(7783863-7783950)
chr3 (158-390)||(54624586-54624806)
chr3 (218-331)||(7784101-7784215)
chr3 (172-390)||(17529895-17530102)
chr3 (43-151)||(13328591-13328699)
chr3 (247-390)||(32877877-32878021)
chr3 (172-390)||(48978614-48978817)
chr3 (172-390)||(48988154-48988357)
chr3 (43-151)||(5385455-5385563)
chr3 (337-408)||(19388864-19388936)
chr3 (218-303)||(4361634-4361720)
chr3 (58-151)||(46305887-46305980)
chr3 (337-387)||(24285487-24285537)
chr3 (510-557)||(23487370-23487417)
chr3 (496-557)||(4951837-4951898)
chr3 (172-209)||(17535004-17535041)
chr3 (409-450)||(23487323-23487364)
chr3 (347-429)||(7783983-7784066)
chr3 (503-562)||(46305313-46305372)
chr3 (158-206)||(32877801-32877848)
[»] scaffold0021 (5 HSPs)
scaffold0021 (233-562)||(124043-124373)
scaffold0021 (83-306)||(143016-143238)
scaffold0021 (158-390)||(99914-100134)
scaffold0021 (43-151)||(142934-143042)
scaffold0021 (158-209)||(180837-180887)
[»] chr1 (19 HSPs)
chr1 (124-434)||(14272008-14272320)
chr1 (124-419)||(14281888-14282186)
chr1 (83-411)||(3470949-3471277)
chr1 (149-562)||(21633493-21633901)
chr1 (218-556)||(5378296-5378632)
chr1 (284-423)||(21919431-21919571)
chr1 (178-562)||(26906112-26906490)
chr1 (222-434)||(40999024-40999239)
chr1 (178-434)||(15809965-15810230)
chr1 (215-386)||(30676766-30676938)
chr1 (43-151)||(3471251-3471359)
chr1 (487-562)||(15809846-15809921)
chr1 (163-210)||(21919579-21919626)
chr1 (503-562)||(14271885-14271944)
chr1 (503-562)||(14281752-14281811)
chr1 (68-150)||(14272331-14272413)
chr1 (68-150)||(14282197-14282279)
chr1 (496-557)||(40998913-40998974)
chr1 (17-77)||(21919674-21919734)
[»] scaffold0010 (2 HSPs)
scaffold0010 (178-420)||(256899-257142)
scaffold0010 (502-562)||(257244-257304)
[»] scaffold0053 (3 HSPs)
scaffold0053 (284-521)||(2162-2401)
scaffold0053 (161-210)||(2409-2458)
scaffold0053 (17-77)||(2504-2564)
[»] scaffold0040 (4 HSPs)
scaffold0040 (180-450)||(30796-31070)
scaffold0040 (178-446)||(9984-10252)
scaffold0040 (487-562)||(23525-23600)
scaffold0040 (487-562)||(26702-26777)
[»] scaffold0028 (2 HSPs)
scaffold0028 (180-446)||(94407-94678)
scaffold0028 (180-425)||(103870-104119)
[»] scaffold0001 (1 HSPs)
scaffold0001 (180-446)||(408269-408539)
[»] scaffold0482 (2 HSPs)
scaffold0482 (180-429)||(3474-3727)
scaffold0482 (459-521)||(3750-3814)
[»] scaffold0334 (3 HSPs)
scaffold0334 (284-446)||(12525-12688)
scaffold0334 (151-210)||(12696-12756)
scaffold0334 (17-77)||(12791-12851)
[»] scaffold0269 (1 HSPs)
scaffold0269 (247-390)||(14848-14992)
[»] scaffold0223 (1 HSPs)
scaffold0223 (214-389)||(27088-27269)
[»] scaffold0247 (2 HSPs)
scaffold0247 (247-387)||(24600-24741)
scaffold0247 (158-209)||(24524-24574)
[»] scaffold0233 (1 HSPs)
scaffold0233 (180-228)||(26320-26368)
[»] scaffold0101 (1 HSPs)
scaffold0101 (178-274)||(42118-42214)


Alignment Details
Target: chr7 (Bit Score: 475; Significance: 0; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 17 - 557
Target Start/End: Original strand, 32817776 - 32818318
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcct 116  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32817776 atatttatcatctttatctcatttatttgagaacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacattct 32817875  T
Q  117 acaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagtt 216  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  32817876 acaatatttttgtttgagacgctagatccaaacaatcatcctacaaagtgtaaactagatctcaagtctattgggcttaatagtttaagataggaaagtt 32817975  T
Q  217 ccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgt 316  Q
    | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32817976 cgaacctttcttgtgcgaaaacaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgt 32818075  T
Q  317 tggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcat 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |    
T  32818076 tggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggaccggaagtagccgggtttggtgaaccaggataactctcct 32818175  T
Q  416 gtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacac-actatcacacacattaatatttatttatctccagaatatt 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  32818176 gtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacacaactatcacacacattaatatctatttatctccagaatatt 32818275  T
Q  515 ctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  32818276 ctggtcctaattaatcacaaccaaattaatcaagagttctctg 32818318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 83 - 562
Target Start/End: Original strand, 9736792 - 9737262
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||| ||||||| ||||||||||| |||| |||||| |||||||| |||||||||||||||||||| |||||||||  |||||||| |||||    
T  9736792 tttgtttgagacacaaagatccaaacaacatcttaca-tattttggtttgagaagctagatccaaacaatcatcctacaaagtgataactagatctcaag 9736890  T
Q  183 tctattgggcttaatagtttgagataggaaa-gttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||    
T  9736891 tctattgggcttaatagtttgagataggaaaagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacaggggcta 9736990  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  9736991 cagactgatctggtgtgatcaaggccttatagtgttggttagaagtttctacaaactgaatactataatggataatctcacacgaagtgtggggactgga 9737090  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacacactatc 480  Q
    ||||||||||||| || |||||||||||||||| ||||||||||||||||        |||||| | |||||||||||||||| |||  |||||||||||    
T  9737091 agtagccgggtttagtgaaccaggataactctcctgtgttattcttcttt--------ctctctatctcttttatttttacacaata--cacacactatc 9737180  T
Q  481 acacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||| | || || |||| ||| |||||||| ||||||||||||||||||| | |||| ||||||| ||| ||||||| ||||    
T  9737181 acacgctttcatttttacttaactccagaacattctggtcctaattaatctcaaccatattaatctagaattctctggtcct 9737262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 68 - 446
Target Start/End: Complemental strand, 14644836 - 14644454
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa-tcatcttacaaagtg 166  Q
    |||||| ||||||||||||||||| |   |||| | ||||||||||||||||    |||||||||||||  | ||||||||||| ||| ||||||||| |    
T  14644836 tttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacattcgatccaaacaaatcaccttacaaagag 14644737  T
Q  167 taaactagatatcaagtctattgggcttaatagtttgagataggaaa-gttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggtt 265  Q
      |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  14644736 ataactagatctcaagtctattgggcttaatagtttgagataggaaaagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggtt 14644637  T
Q  266 gataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacg 365  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14644636 gataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacg 14644537  T
Q  366 aagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  14644536 aagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctctctctctctctctct 14644454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 68 - 425
Target Start/End: Complemental strand, 14635136 - 14634776
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa-tcatcttacaaagtg 166  Q
    |||||| ||||||||||||||||| |   |||| | ||||||||||||||||    |||||||||||||  | ||||||||||| ||| ||||||||| |    
T  14635136 tttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacattcgatccaaacaaatcaccttacaaagag 14635037  T
Q  167 taaactagatatcaagtctattgggcttaatagtttgagataggaaa-gttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggtt 265  Q
      |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  14635036 ataactagatctcaagtctattgggcttaatagtttgagataggaaaagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggtt 14634937  T
Q  266 gataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacg 365  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  14634936 gataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccagctgcatactatagtggataatctcacacg 14634837  T
Q  366 aagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct 425  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  14634836 aagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 14634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 125 - 434
Target Start/End: Complemental strand, 33292478 - 33292165
Alignment:
Q  125 tttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttccaacc 222  Q
    ||||||||||||  | ||||||||||| ||| ||||||||| |  |||||||| |||||||||||||||| |||||||||||||||||| ||||||||||    
T  33292478 tttgtttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaagtctattgggctcaatagtttgagataggaagagttccaacc 33292379  T
Q  223 tttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggtta 322  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  33292378 tttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggtta 33292279  T
Q  323 gaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgtta 421  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  33292278 gaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtta 33292179  T
Q  422 ttct-tctttctct 434  Q
    |||| |||||||||    
T  33292178 ttctctctttctct 33292165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 83 - 446
Target Start/End: Complemental strand, 15947714 - 15947349
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaa 181  Q
    |||||||||||||| | ||| ||||||||||| | |  || |||||||||||||  | ||||||||||| ||| ||||||||| |  |||||||| ||||    
T  15947714 tttgtttgagacgcca-gatccaaacaacatctttct-tacttttgtttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaa 15947617  T
Q  182 gtctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtt 280  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||    
T  15947616 ggctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggtt 15947517  T
Q  281 acagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgg 380  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15947516 acggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggtgactgg 15947417  T
Q  381 aagtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  15947416 aagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctctctctctctctctct 15947349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 178 - 413
Target Start/End: Complemental strand, 11634576 - 11634340
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||||||||| ||||||||||||||||     
T  11634576 tcaagtctattgggctgaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaagcctgctgaggttgataatacaga 11634478  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11634477 ggttacaaactgatcgggtgtgatcaagacgttatagtgttggttagaagtttctgccaactgaatactatagtggataatctcacacgaagtgtgggga 11634378  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctc 413  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  11634377 ctggaagtagccggatttggtgaaccaggataactctc 11634340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 284 - 460
Target Start/End: Original strand, 13874433 - 13874610
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaag 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13874433 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaaaactatagtggataatctcacacgaagtgtggggactggaag 13874532  T
Q  384 tagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatct-tttattttta 460  Q
    ||| ||| || ||| |||||||||||||||| |||||||||  ||| ||||| || |||||||| ||| ||||||||||    
T  13874533 tag-cggattgggtgaaccaggataactctcctgtgttatttctctctctctctctctctctctctctctttattttta 13874610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 15174481 - 15174751
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| |||| || |||||||| |||||||||||||||||    
T  15174481 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattatataagcctgctgaggttgataatacagg 15174579  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || || |||||||||||||||||||||| ||| ||||| | || |||||||| |   | |||  ||| |||||||||||||||||||||||| ||||||    
T  15174580 tgtaacggactgatctggtgtgatcaagatcttgtagtgctagtcagaagtttttgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 15174677  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| ||||| || ||||||||    
T  15174678 ggactggaagtagccgggtttggtgaaccaggataaatctcctgtgttattcttctctctctctctctctctct 15174751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 180 - 434
Target Start/End: Original strand, 7592947 - 7593205
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||  |||||||||||||||||    
T  7592947 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgatgaggttgataatacagg 7593045  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||| ||||||||||||||||| ||||||    
T  7593046 tgttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactataatggataatctcacacgaggtgtgg 7593143  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| |||||    
T  7593144 ggactggaagtagccaggtttggtgaaccaggataactctcttgtgttattcttctctctct 7593205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 402 - 557
Target Start/End: Original strand, 28344230 - 28344379
Alignment:
Q  402 aggataactctcatgtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttattta 501  Q
    |||||||||||| |||||||||||||||||||| ||||| |||      |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28344230 aggataactctcctgtgttattcttctttctctctccctgtct------tttatttttacacgatatgcacacactatcacacacattaatatttattta 28344323  T
Q  502 tctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    ||||||||||||| || || ||||||||||| |||||||||||| |||||||||||    
T  28344324 tctccagaatattttgatcttaattaatcacaaccaaattaatccagagttctctg 28344379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 83 - 263
Target Start/End: Original strand, 28344053 - 28344232
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  |||||||||||||||||| |||||||||  |||||||| |||||    
T  28344053 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattagatccaaacaatcatcctacaaagtgataactagatctcaag 28344150  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggagg 263  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||| |||| ||||    
T  28344151 tctattgggcttaatagtttgagataggaagagttccagcctttcttgtgcaaaagcaaataattgtagaagtctgctgagg 28344232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 301 - 446
Target Start/End: Complemental strand, 48710131 - 48709984
Alignment:
Q  301 caagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgt-ggggactggaagtagccgggtttggt-a 398  Q
    ||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| |    
T  48710131 caagaccttatagtgctagttagaagtttctactagctgaatactatagtggataatctcacacgaagtgtgggggactggaagtatccgagtttggtga 48710032  T
Q  399 accaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    ||||| ||| ||||| |||||||||||| ||||||| || ||||||||    
T  48710031 accagaatatctctcctgtgttattcttatttctctctctctctctct 48709984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 149 - 305
Target Start/End: Complemental strand, 48711557 - 48711401
Alignment:
Q  149 caatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgt 248  Q
    |||||||| |||||||||||| |||| | |||||||||||| ||||||||||||||||||| ||||||  ||||||||||||| ||||| ||| |||| |    
T  48711557 caatcatcatacaaagtgtaatctaggtctcaagtctattgtgcttaatagtttgagatagaaaagttttaacctttcttgtgtgaaagcaaagaattat 48711458  T
Q  249 agaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaaga 305  Q
    |||||||||  ||||||||||||||| | ||| |  |||||| ||||||||||||||    
T  48711457 agaagcctgttgaggttgataatacatgtgttccgaactgatatggtgtgatcaaga 48711401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 28343972 - 28344079
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||| || ||||||||||||||||||||    
T  28343972 ttgagaacatctttctgagtttgtatttgtaaaatgatagtttgttggagacacaaagatccaaacaacatcctac-atttttttgtttgagacgctaga 28344070  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  28344071 tccaaacaa 28344079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 158 - 397
Target Start/End: Complemental strand, 4306821 - 4306585
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctg 257  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| ||||    |||||||||||||||||| ||   | || ||||||||||| |||    
T  4306821 tacaaagtgtaaactaggtttcaagtctattgggcttaatagtttgatatagagttgttccaacctttcttgtgtga---tcaataattgtagaagtctg 4306725  T
Q  258 cggaggttgataatacaggggtta--cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggata 355  Q
    | |||||||||||||||| |  ||  | |||||||||||||||||||| | |  |||||| |  | | ||||||||   |  || |||||||||| || |    
T  4306724 ctgaggttgataatacagagtgtaatcggactgatctggtgtgatcaacaac--atagtgctattcataagtttctgatagttggatactatagtagaaa 4306627  T
Q  356 atctcacacgaagtgtggggactggaagtagccgggtttggt 397  Q
    ||||||| ||||||||||| |||||||||||| || ||||||    
T  4306626 atctcactcgaagtgtgggaactggaagtagctggctttggt 4306585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 470 - 556
Target Start/End: Complemental strand, 48709938 - 48709852
Alignment:
Q  470 cacacactatcacacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctct 556  Q
    ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  48709938 cacacactaccacacgcattaatatttatttatctctagaatattctggtcctaattaatcacaaccatattaatccagagttctct 48709852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 9736710 - 9736828
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgc-tag 141  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||||   |||||||||||||| |  ||    
T  9736710 ttgagaacatctttctgagtttgtatttgtaaaaggatagtctgtctgagacacaaagatccaaacaacatcctacatattttttgtttgagacacaaag 9736809  T
Q  142 atccaaacaatcatcttaca 161  Q
    |||||||||| |||||||||    
T  9736810 atccaaacaa-catcttaca 9736828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 423
Target Start/End: Complemental strand, 19352768 - 19352589
Alignment:
Q  246 tgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatac 344  Q
    ||||||||||||  |||||| ||||||||||| || || ||  ||||||||||||||| ||  |||||||    || ||||||||||   | | | | ||    
T  19352768 tgtagaagcctgatgaggttcataatacagggtgtaacggaaagatctggtgtgatcaggaatttatagtacaagtcagaagtttctgttagcaggagac 19352669  T
Q  345 tatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttatt 423  Q
    |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||| ||||||||| ||| |||||    
T  19352668 tatagtggataatctcacacgaagtgtgaggactggaagtagccgaatttggtgaaccagtataactctcctgtattatt 19352589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 470 - 562
Target Start/End: Complemental strand, 48709820 - 48709726
Alignment:
Q  470 cacacactatcacacacat--taatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||||||||||| |||  ||||||||||| ||||||| |||||| ||||||||||||||||  | |||||||||| ||||||||||| ||||    
T  48709820 cacacactatcacactcatattaatatttattaatctccataatattttggtcctaattaatcaaaatcaaattaatccagagttctctgatcct 48709726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 33292574 - 33292492
Alignment:
Q  69 ttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa 151  Q
    ||||| ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||||| ||||||||||||    
T  33292574 ttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgccagatccaaacaa 33292492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 14777359 - 14777396
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagatag 209  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  14777359 tagatctcaagtctattgggcttaatagtttgagatag 14777396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 15229497 - 15229534
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagatag 209  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  15229497 tagatctcaagtctattgggcttaatagtttgagatag 15229534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 562
Target Start/End: Complemental strand, 15947277 - 15947218
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||| ||||||||||||| ||||| | |||| ||||||| ||||||||||| ||||    
T  15947277 ctccagaacattctggtcctaaataatctcaaccatattaatccagagttctctggtcct 15947218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 15947771 - 15947688
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa 151  Q
    |||||| ||||||||||||||||| |   |||| | |||||||||||||||     ||||||||||||||| ||||||||||||    
T  15947771 tttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctactcatcttttgtttgagacgccagatccaaacaa 15947688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 557
Target Start/End: Complemental strand, 5293120 - 5293070
Alignment:
Q  507 agaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    |||||||| ||||||||||||| ||| | |||||||||| |||||||||||    
T  5293120 agaatattttggtcctaattaaacacaatcaaattaatccagagttctctg 5293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 370; Significance: 0; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 18 - 556
Target Start/End: Complemental strand, 50516900 - 50516361
Alignment:
Q  18 tatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatccta 117  Q
    |||||||||| |||||||||||||||||| || ||||    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  50516900 tatttatcatatttatctcatttatttgagaaaatct----gagtttgtatttgtaaaaggatagtttgtttgagacgcggagatccaaacaacatccta 50516805  T
Q  118 caatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttc 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  50516804 caatatttttgtttgagacgctagatccaaacaatcatcctacaaagtgtaaaatagatctcaagtctattgggcttaatagtttgagataggaaagttc 50516705  T
Q  218 caacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgtt 317  Q
    |||||||||||| ||||||| ||| |||||||  ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  50516704 caacctttcttgagcgaaagcaaagaattgtaacagcctgctgaggttgataatacaagggttacggactgatctggtgtgatcaagaccttatagtgtt 50516605  T
Q  318 ggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggttt-ggtaaccaggataactctcatg 416  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||| ||    
T  50516604 ggttagaaatttctaccaacggaatactatagtggataatctcacacgaagtgtggggactggaagtagtcgggtttggggaaccaggataactctcctg 50516505  T
Q  417 tgttattcttctttctctgt----ccctctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttatttatctccagaata 512  Q
    |||||||||||||||||| |    | ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||  |||    
T  50516504 tgttattcttctttctctctctccctctctctctatcttttatttttactcgatatgcacacattatcacacacattaatatttatttatctccaagata 50516405  T
Q  513 ttctggtcctaattaatcacgaccaaattaatcaagagttctct 556  Q
    | |||| ||||||||||||| | |||||||||| ||||||||||    
T  50516404 tcctggacctaattaatcacaagcaaattaatccagagttctct 50516361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 83 - 562
Target Start/End: Original strand, 11482162 - 11482645
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  |||||||||||||||||||||||||| | ||||||||| |||||    
T  11482162 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattagatccaaacaatcatcttacaaagagaaaactagatctcaag 11482259  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||    
T  11482260 tctattcggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagccggctgaggttgataatacaggggtta 11482359  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    | ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  11482360 cggactgatatggtgtgataaagaccttatagtgttggttagaagtttctaccaactgtatactatagtggataatctcacacgaagtgtggggactaga 11482459  T
Q  382 agtagccgggtttgg-taaccaggataactctcatgtgttattcttctt--tctctgtccctc--tctctatcttttatttttacacgatatgcacacac 476  Q
    |||||||||||||||  |||||||||||||||| |  ||||||||||||  ||||| ||||||  |||||||||||||||||| ||| |||| ||||| |    
T  11482460 agtagccgggtttggacaaccaggataactctcctacgttattcttctttctctctctccctctatctctatcttttatttttgcacaatatacacaccc 11482559  T
Q  477 tatcacacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  11482560 tatcacaagcattaatatttatttatctccagaatgttctggtcctaattaatcacaaccaaattaatccagagttctctggtcct 11482645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 83 - 425
Target Start/End: Complemental strand, 20884790 - 20884447
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaa 181  Q
    |||||||||||||| | ||| ||||||||||| | |  || |||||||||||||  | ||||||||||| ||| ||||||||| |  |||||||| ||||    
T  20884790 tttgtttgagacgcta-gatccaaacaacatctttct-tacttttgtttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaa 20884693  T
Q  182 gtctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtt 280  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||    
T  20884692 gtctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggtt 20884593  T
Q  281 acagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgg 380  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20884592 acggactgatctggtgtgatcaaaaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactgg 20884493  T
Q  381 aagtagccgggttt-ggtaaccaggataactctcatgtgttattct 425  Q
    |||||||||||||| || |||||||||||||||| |||||||||||    
T  20884492 aagtagccgggtttggggaaccaggataactctcctgtgttattct 20884447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 180 - 450
Target Start/End: Original strand, 26812449 - 26812723
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  26812449 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagg 26812547  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  26812548 tgttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 26812645  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatct 450  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| || || |||||||||    
T  26812646 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctctctctctatctctatct 26812723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 434
Target Start/End: Complemental strand, 3242534 - 3242276
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  3242534 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 3242436  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  3242435 ggttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 3242338  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  3242337 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctct 3242276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 434
Target Start/End: Original strand, 26821916 - 26822174
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  26821916 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagg 26822014  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  26822015 tgttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 26822112  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  26822113 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctct 26822174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 37059027 - 37059297
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    |||||||||| |||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  37059027 aagtctattgagcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagg 37059125  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || || |||||||||||||||||||||| ||| ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  37059126 tgtaacggactgatctggtgtgatcaagatcttgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 37059223  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| || ||||||||    
T  37059224 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctctctctctctctct 37059297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 54690160 - 54689889
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  54690160 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 54690062  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  54690061 ggttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 54689964  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  54689963 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctctctctctctctctct 54689889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 54699591 - 54699320
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  54699591 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 54699493  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  54699492 ggttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 54699395  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  54699394 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctctctctctctctctct 54699320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 3918007 - 3918278
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| |||| || ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  3918007 aagtctattgggcttaatagttttgagaaagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 3918105  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || || || | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  3918106 ggttacggactgatctggtgtgatcaagaaattgtaatgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 3918203  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  3918204 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctctctctctctctctct 3918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 15843145 - 15842875
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| ||| |||||||||| ||| |  ||  ||| ||||||||||||||||  ||||||||||||||||    
T  15843145 aagtctattgggcttaatagttttgagatagaaaatttc-aacctttcttttgctagtgtgcaaagaattgtagaagcctgcttaggttgataatacagg 15843047  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || ||||||||||||| ||||||||||| ||||||||| | || ||||||||||   | |||  ||  |||||||||||||||||||||||| ||||||    
T  15843046 tgtaacagactgatctgatgtgatcaagatcttatagtgctagtcagaagtttctgttagcaa--gacaactatagtggataatctcacacgaggtgtgg 15842949  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||| ||||||| ||||| |||||||||| |||||||||| ||| ||||| || ||||||||    
T  15842948 ggactggaagtagccgagtttggtgaaccaagataactctcctgtgttattcctctctctctctctctctctct 15842875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 158 - 390
Target Start/End: Original strand, 23622850 - 23623070
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctg 257  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||    
T  23622850 tacaaagtgtaa-ctagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctg 23622936  T
Q  258 cggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataa 356  Q
    | |||||||||||||||| | || ||||||||||||||||||||||| |  |||||||| |  | ||||||||||   | | | ||||||||||||||||    
T  23622937 ctgaggttgataatacagagtgtaacagactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataa 23623036  T
Q  357 tctcacacgaagtgtggggactggaagtagccgg 390  Q
    ||||||||| ||||||||||||||| ||||||||    
T  23623037 tctcacacgtagtgtggggactggacgtagccgg 23623070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 11482080 - 11482188
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatat-ttttgtttgagacgctag 141  Q
    |||| ||||||||| ||||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  11482080 ttgagaacatctttatgagtttgtatttatacaaggatagtttgtttgagacacaaagatccaaacaacatcctac-atatcttttgtttgagacgctag 11482178  T
Q  142 atccaaacaa 151  Q
    ||||||||||    
T  11482179 atccaaacaa 11482188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 18125616 - 18125530
Alignment:
Q  218 caacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatac-aggggttacagactgatctggtgtgatcaa 303  Q
    |||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||| ||| || ||||| ||||||| |||||||||    
T  18125616 caacctttcttgtgcgaaagtaaagaattgaagaagtctgctgaggttgataatacaaggtgtaacagaatgatctgttgtgatcaa 18125530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 503 - 562
Target Start/End: Complemental strand, 20884380 - 20884321
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| ||||||||||| ||||    
T  20884380 ctccagaacattctggtcctaattaatctcaaccatattaatccagagttctctggtcct 20884321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 20884847 - 20884764
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa 151  Q
    |||||| || |||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||||||||||||||||||    
T  20884847 tttgtacaatgatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgctagatccaaacaa 20884764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 41902782 - 41902641
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctg 257  Q
    |||||||||||| |||| | ||||||||||| |    |||||||||||| || |  ||||||||||||| ||||| |||| ||| ||||||| |||| ||    
T  41902782 tacaaagtgtaatctagttctcaagtctatttgttacaatagtttgagaaagaactgttccaacctttcctgtgcaaaagcaaagaattgtataagcatg 41902683  T
Q  258 cggaggttgataatacaggggttacagactgatctggtgtgat 300  Q
      || |||||||||| | | || || |||||||||||||||||    
T  41902682 ttgaagttgataataga-gtgtaactgactgatctggtgtgat 41902641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 16490087 - 16490047
Alignment:
Q  169 aactagatatcaagtctattgggcttaatagtttgagatag 209  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  16490087 aactagatctcaagtttattgggcttaatagtttgagatag 16490047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 21667845 - 21667754
Alignment:
Q  215 ttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatac-aggggttacagactgatctggtgtgatcaaga 305  Q
    ||||||||||||||||||||||  ||| |||||||||||| | | || ||||| ||||| | | || | |||||||||| ||||||||||||    
T  21667845 ttccaacctttcttgtgcgaaaacaaagaattgtagaagcttactgaagttgacaatacaatgtgtaatagactgatctagtgtgatcaaga 21667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 21676609 - 21676518
Alignment:
Q  215 ttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatac-aggggttacagactgatctggtgtgatcaaga 305  Q
    ||||||||||||||||||||||  ||| |||||||||||| | | || ||||| ||||| | | || | |||||||||| ||||||||||||    
T  21676609 ttccaacctttcttgtgcgaaaacaaagaattgtagaagcttactgaagttgacaatacaatgtgtaatagactgatctagtgtgatcaaga 21676518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 388
Target Start/End: Original strand, 45609551 - 45609598
Alignment:
Q  341 atactatagtggataatctcacacgaagtgtggggactggaagtagcc 388  Q
    |||| |||||||||||||||| |||||||| | |||||||||||||||    
T  45609551 ataccatagtggataatctcatacgaagtgcgaggactggaagtagcc 45609598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 41902616 - 41902572
Alignment:
Q  341 atactatagtggataatctcacacgaagtgtggggactggaagta 385  Q
    ||||||||||||||||||||||| | ||  |||||||||||||||    
T  41902616 atactatagtggataatctcacaaggagcctggggactggaagta 41902572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 317; Significance: 1e-178; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 83 - 562
Target Start/End: Complemental strand, 42712518 - 42712033
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  | |||||||||||||| ||||||||| |  |||||||| |||||    
T  42712518 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattcgatccaaacaatcaccttacaaagagataactagatctcaag 42712421  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  42712420 tctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggtta 42712321  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42712320 cggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactgga 42712221  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattcttctt------tctctgtccctctctctatcttttatttttacacgatatgcacac 474  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||      ||||| || |||||||| |||||||||||||||||||||||||||    
T  42712220 agtagccgggtttggtgaaccaggataactctcctgtgttattcttctttctctctctctctctctctctctctcttttatttttacacgatatgcacac 42712121  T
Q  475 actatcacacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  42712120 actatcacaagcattaatatttatttatctccagaatgttctggtcctaattaatcacaaccaaattaatccagagttctctggtcct 42712033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 83 - 562
Target Start/End: Original strand, 20030026 - 20030505
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  | |||||||||||||| ||||||||| |  |||||||| |||||    
T  20030026 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattcgatccaaacaatcaccttacaaagagataactagatctcaag 20030123  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||    
T  20030124 tctatttggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagggatta 20030223  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20030224 cggactgatctggtgtgatcaagaccttatagtgttggttagaagtttataccaactgtatactatagtggataatctcacacgaagtgtggggactgga 20030323  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacacactatc 480  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||  | |||||||||||||||||||||||||||||| |||||||| ||    
T  20030324 agtagccgggtttggtgaaccaggataactctcttgtgttattcttctttctctccctctctctctatcttttatttttacacgatattcacacactgtc 20030423  T
Q  481 acacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||  |||||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||| ||||||||||| ||||    
T  20030424 acaagcattaatatttatttatctccagaatgttctgttcctaattaatcacaaacaaattaatccagagttctctggtcct 20030505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 121 - 482
Target Start/End: Original strand, 20044701 - 20045064
Alignment:
Q  121 tatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttcca 219  Q
    ||||||||||||||||  | |||||||||| ||| ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  20044701 tatttttgtttgagacattcgatccaaacattcaccttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaagagttcca 20044800  T
Q  220 acctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttgg 319  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20044801 acctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacaggggttacggactgatctggtgtgatcaagaccttatagtgttgg 20044900  T
Q  320 ttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtg 418  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  20044901 ttagaagtttctaccaactgtatactatcgtggataatctcacacgaagtgtggggactggatgtagccgggtttggtgaaccaggataactctcatgtg 20045000  T
Q  419 ttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacacactatcac 482  Q
    ||||||||||||||||  | |||||||||||||||||||||||||||||| |||||||||||||    
T  20045001 ttattcttctttctctccctctctctctatcttttatttttacacgatattcacacactatcac 20045064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 43 - 446
Target Start/End: Original strand, 12767438 - 12767843
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||||||| |||||||||||||||| ||||||||||| |||||||||| | ||| ||||||||||| | |   ||||| |||||||||  ||||    
T  12767438 ttgagaacatctttatgagtttgtatttgtacaaggatagtttttttgagacgcta-gatccaaacaacatctttctc-attttcgtttgagacattaga 12767535  T
Q  143 tccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaa 241  Q
    |||||||||||||||||||||  |  |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  12767536 tccaaacaatcatcttacaaaaagataactagatctcaagtctattgagcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaa 12767635  T
Q  242 aaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaa 341  Q
     |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12767636 gaattgtagaagcctgctgaggttgataatacaggggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaa 12767735  T
Q  342 tactatagtggataatctcacacgaagtgtggggac--tggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtcc 438  Q
    |||||||||||||||||||||||||| |||||||||  |||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||| |||    
T  12767736 tactatagtggataatctcacacgaaatgtggggactgtggaagtaaccgggattggtgaaccaggataactctcctgtgttattcttctttctctctcc 12767835  T
Q  439 ctctctct 446  Q
    ||||||||    
T  12767836 ctctctct 12767843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 83 - 446
Target Start/End: Original strand, 12925200 - 12925565
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaa 181  Q
    |||||||||||||| | ||| ||||||||||| | |  || |||||||||||||  | ||||||||||| ||| ||||||||| |  |||||||| ||||    
T  12925200 tttgtttgagacgcta-gatccaaacaacatctttct-tacttttgtttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaa 12925297  T
Q  182 gtctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtt 280  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||||||| ||||    
T  12925298 gtctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaaacaaagaattgtagaagcctgctgaggttgataatacagtggtt 12925397  T
Q  281 acagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgg 380  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12925398 acggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactgg 12925497  T
Q  381 aagtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    |||||| ||||||| || |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  12925498 aagtagtcgggtttcgtgaaccaggataactctcctgtgttattctctctctctctctctctctctct 12925565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 151 - 557
Target Start/End: Complemental strand, 31575681 - 31575272
Alignment:
Q  151 atcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtag 250  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||   | || ||||||||    
T  31575681 atcatcatacaaagtgtaaactagatctcaagtctattgggcttaatagtttgagatagaagagttccaacctttcttgtgtga---tcaagaattgtag 31575585  T
Q  251 aagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagt 350  Q
    |||| ||| |||||||||||||||||||||   ||||||| |||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||    
T  31575584 aagcttgctgaggttgataatacaggggttctggactgatttggtgtgatcaagaccttatagtgctagttagaagtttctactagctgaatactatagt 31575485  T
Q  351 ggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatc 449  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||| ||| ||||||    |||| ||| ||    
T  31575484 ggataatctcacacgaagtgtggggactggaagtagccggatttggtgaaccaggataactctcttgtgttattgttccttctct----ctctatctctc 31575389  T
Q  450 tttta-tttttacacgat------atgcacacactatcaca--cacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaat 540  Q
    ||||| ||||||||  ||      |  ||||||||||||||  || ||||||||||||| | |||||||||||||||||||||||||||||  |||||||    
T  31575388 ttttattttttacataatacacacacacacacactatcacactcatattaatatttattaacctccagaatattctggtcctaattaatcataaccaaat 31575289  T
Q  541 taatcaagagttctctg 557  Q
    ||||| |||||||||||    
T  31575288 taatccagagttctctg 31575272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 178 - 425
Target Start/End: Complemental strand, 18143675 - 18143427
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||||||| | ||||||||||||||| |    
T  18143675 tcaagtctattgggcttaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaagcctactgaggttgataatacaag 18143577  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  18143576 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttttaccaactgaatgctatagtggataatctcacacgaagtgtgggga 18143477  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgttattct 425  Q
    |||||||||||||| |||||| ||||| |||||||||| |||||||||||    
T  18143476 ctggaagtagccggatttggtgaaccaagataactctcctgtgttattct 18143427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 178 - 423
Target Start/End: Complemental strand, 25037272 - 25037026
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||||||||| ||||||||||||||||     
T  25037272 tcaagtatattgggcttaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaagcctgctgaggttgataatacaga 25037174  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25037173 ggttacagactgatctggtgtgatcaagactttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 25037074  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgttatt 423  Q
    |||||||||||| | || ||| ||||| |||||||||| |||||||||    
T  25037073 ctggaagtagccagattgggtgaaccaagataactctcttgtgttatt 25037026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 178 - 423
Target Start/End: Complemental strand, 25051309 - 25051063
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||||||||| ||||||||||||||||     
T  25051309 tcaagtatattgggcttaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaagcctgctgaggttgataatacaga 25051211  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25051210 ggttacagactgatctggtgtgatcaagacattatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 25051111  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgttatt 423  Q
    |||||||||||| | || ||| ||||| |||||||||| |||||||||    
T  25051110 ctggaagtagccagattgggtgaaccaagataactctcttgtgttatt 25051063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 178 - 420
Target Start/End: Complemental strand, 18883406 - 18883163
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||||||||| ||||||||||||||||     
T  18883406 tcaagtctattgggctgaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaagcctgctgaggttgataatacaga 18883308  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    || |||  |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18883307 gggtacgaactgatctggtgtgatcaagactttatagtgttggttagaattttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 18883208  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgtt 420  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||    
T  18883207 ctggaagtagccggatttggtgaaccaggataactctcctgtgtt 18883163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 178 - 425
Target Start/End: Complemental strand, 4843970 - 4843720
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataata--ca 274  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||||||||  |||||||||||||  ||    
T  4843970 tcaagtctattggccttaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaagcctgatgaggttgataatataca 4843872  T
Q  275 ggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggg 374  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4843871 agggttacagactgatctggtgtgatcaagaccttatagtcttggttagaaatttctaccaactgaatactatagtggataatctcacacgaagtgtggg 4843772  T
Q  375 gactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct 425  Q
    |||||||||||||||| ||| || |||||||||||||||| | |||||||||    
T  4843771 gactggaagtagccggatttagtgaaccaggataactctcctttgttattct 4843720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 178 - 413
Target Start/End: Original strand, 18251770 - 18252006
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||| ||||| ||||||||||||||||     
T  18251770 tcaagtctattgggctgaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaatcctgctgaggttgataatacaga 18251868  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18251869 ggttacaaactgatcgggtgtgatcaagacgttatagtgttggttagaagtttctgccaactgaatactatagtggataatctcacacgaagtgtgggga 18251968  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctc 413  Q
    |||||||||||||| |||||| || |||||||||||||    
T  18251969 ctggaagtagccggatttggtgaatcaggataactctc 18252006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 178 - 413
Target Start/End: Original strand, 18232868 - 18233104
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||| ||||| ||||||||||||||||     
T  18232868 tcaagtctattgggctgaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaatcctgctgaggttgataatacaga 18232966  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||| ||||||| |||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18232967 ggttacaaactgatcgggtgtgatcaagacgttgtagtgttgattagaagtttctgccaactgaatactatagtggataatctcacacgaagtgtgggga 18233066  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctc 413  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  18233067 ctggaagtagccggatttggtgaaccaggataactctc 18233104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 178 - 413
Target Start/End: Original strand, 18242319 - 18242555
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||| ||||| ||||||||||||||||     
T  18242319 tcaagtctattgggctgaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaatcctgctgaggttgataatacaga 18242417  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||| ||||||| |||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18242418 ggttacaaactgatcgggtgtgatcaagacgttgtagtgttgattagaagtttctgccaactgaatactatagtggataatctcacacgaagtgtgggga 18242517  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctc 413  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  18242518 ctggaagtagccggatttggtgaaccaggataactctc 18242555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 277 - 446
Target Start/End: Original strand, 12915499 - 12915668
Alignment:
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12915499 ggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtgggga 12915598  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||| ||| ||||| || ||||||||    
T  12915599 ctggaagtagccgggtttggtgaaccaggataactctcctgtgttattc-tctctctctctctctctctct 12915668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 20714010 - 20714280
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    |||| |||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| |||||||||||||||| |||||||||||||||||    
T  20714010 aagtatattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtagaagcctgctgaggttgataatacagg 20714108  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || ||||||||||||||||||||||||| ||||||||| | || ||||||||||   | |||  ||  |||||| |||||||| |||||||| ||||||    
T  20714109 tgtaacagactgatctggtgtgatcaagatcttatagtgctagtcagaagtttctgttagcaa--gacaactataatggataatgtcacacgaggtgtgg 20714206  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  20714207 ggactggaagtagccgggtttggtgaaccaggataactctcatgtgttattcttctctctctctctctctctct 20714280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 180 - 429
Target Start/End: Complemental strand, 7789325 - 7789072
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  7789325 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 7789227  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||||||||||||||||||||||||||  || ||||| | || |||||||||   || |||  ||  |||||||||||||||||||||||| ||||||    
T  7789226 ggttacagactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gacaactatagtggataatctcacacgaggtgtgg 7789129  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctt 429  Q
    |||||||||||||||||||||||| |||||| |||| |||| |||||||||||||||    
T  7789128 ggactggaagtagccgggtttggtgaaccagaataattctcctgtgttattcttctt 7789072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 284 - 446
Target Start/End: Complemental strand, 33601913 - 33601750
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaag 383  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33601913 gactgatctagtgtgatcaagaccttatagtgttggtcagaagtttctgtcaactgaaaactatagtggataatctcacacgaagtgtggggactggaag 33601814  T
Q  384 tagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    ||||||| || ||| |||||||||||||||| ||||||||| |||| ||||| || ||||||||    
T  33601813 tagccggattgggtgaaccaggataactctcctgtgttatttttctctctctctctctctctct 33601750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 284 - 446
Target Start/End: Complemental strand, 33592274 - 33592111
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaag 383  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33592274 gactgatctagtgtgatcaagaccttatagtgttggtcagaagtttctgtcaactgaaaactatagtggataatctcacacgaagtgtggggactggaag 33592175  T
Q  384 tagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    ||||||| || ||| |||||||||||||||| |||||||||  ||| ||||| || ||||||||    
T  33592174 tagccggattgggtgaaccaggataactctcctgtgttatttctctctctctctctctctctct 33592111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 284 - 413
Target Start/End: Original strand, 24634015 - 24634145
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaag 383  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  24634015 gactgatctggtgtgatcaagaccttatagtgctagttagaagtttctactagctgaatactatagtggataatatcacacgaagtgtggggactggaag 24634114  T
Q  384 tagccgggtttg-gtaaccaggataactctc 413  Q
    ||| |||||||| | ||||||||||||||||    
T  24634115 tagtcgggtttgaggaaccaggataactctc 24634145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 42896289 - 42896183
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaag 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  42896289 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctatcaactgaaatctatagtggataatctcacacgaagtgtggagactggaag 42896190  T
Q  384 tagccgg 390  Q
    |||||||    
T  42896189 tagccgg 42896183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 430 - 562
Target Start/End: Original strand, 12767861 - 12767993
Alignment:
Q  430 tctctgtccctctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttatttatctccagaatattctggtcctaattaat 529  Q
    ||||| || |||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |  |||| || ||||||||||||    
T  12767861 tctctctctctctctctatcttttacttttacacaatatgcacacactatcacacgcattaatatttatttatctctaagatatactcgtcctaattaat 12767960  T
Q  530 cacgaccaaattaatcaagagttctctgctcct 562  Q
    ||| | |||||||||| ||||||||||| ||||    
T  12767961 cacaatcaaattaatccagagttctctggtcct 12767993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 470 - 562
Target Start/End: Complemental strand, 26193967 - 26193875
Alignment:
Q  470 cacacactatcacacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||| || |||| ||||||| ||||||||||| ||||    
T  26193967 cacacacaatcacacacattaatatttatttatctccaaaatattatggtcctaattaattacaaccagattaatccagagttctctggtcct 26193875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 359 - 425
Target Start/End: Original strand, 20714417 - 20714484
Alignment:
Q  359 tcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct 425  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20714417 tcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcatgtgttattct 20714484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 422
Target Start/End: Original strand, 15833931 - 15834137
Alignment:
Q  218 caacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgt 316  Q
    ||||||||| |||| ||||| ||| |||||||||| ||| | || ||||||||||||||| || ||  ||| ||||||| || |||||| |||||||||     
T  15833931 caacctttcatgtgtgaaagcaaagaattgtagaaacctactgatgttgataatacagggagtaacgaacttatctggtatggtcaagaacttatagtgc 15834030  T
Q  317 tggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcat 415  Q
    | || |||||||||    | |   |||||||| ||||||||||||||||| ||||| |||||| |||||||||| |||||| ||||| ||||| |||| |    
T  15834031 tagtcagaagtttcagttagcatgatactataatggataatctcacacgaggtgtgtggactgaaagtagccggatttggtgaaccaagataaatctctt 15834130  T
Q  416 gtgttat 422  Q
    |||||||    
T  15834131 gtgttat 15834137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 562
Target Start/End: Original strand, 20047441 - 20047517
Alignment:
Q  486 cattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||||||||||||||||||||| || || |||||||||||||| | |||||||||| ||||||||||| ||||    
T  20047441 cattaatatttatttatctccagaatgttatgttcctaattaatcacaaacaaattaatccagagttctctggtcct 20047517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 20029944 - 20030052
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| ||||||||||||  || ||||||||||||||||| |   |||| | ||||||||||||||||    |||||||||||||||||||    
T  20029944 ttgagaacatatttctgagtttgtattcatacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgctaga 20030043  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  20030044 tccaaacaa 20030052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 24096038 - 24095963
Alignment:
Q  489 taatatttatttatctc--cagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||    
T  24096038 taatatttattaatctcttcagaatattctggtcctaattaatcacaaccaaattaatccagagttttctggtcct 24095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 24096159 - 24096077
Alignment:
Q  341 atactatagtggataatctcacacgaagtgt-ggggactggaagtagccgggtttggt-aaccaggataactctcatgtgtta 421  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||| |||||| |||| |||| |||||||    
T  24096159 atactatagtggataatctcacacgaggtgtgggggactggaagtagtcgagtttggtgaaccagaataaatctcctgtgtta 24096077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 42712600 - 42712492
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| |||||||||| |  || ||||||||||||||||| |   |||| | ||||||||||||||||    |||||||||||||||||||    
T  42712600 ttgagaacatatttatgagtttgtactcatacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgctaga 42712501  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  42712500 tccaaacaa 42712492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 12925143 - 12925226
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa 151  Q
    |||||| ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||||||||||||||||||    
T  12925143 tttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgctagatccaaacaa 12925226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 24633851 - 24633912
Alignment:
Q  16 catatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    |||||||||||| |||||||| ||| ||||| || ||||||||||||||| |||||||||||    
T  24633851 catatttatcatctttatctcttttgtttgagaatatctttttgagtttgcatttgtaaaag 24633912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 24633960 - 24634008
Alignment:
Q  163 agtgtaaactagatatcaagtctattgggcttaatagtttgagatagga 211  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  24633960 agtgtaaactagatctcaagtctattgggtttaatagtttgggatagga 24634008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 503 - 562
Target Start/End: Original strand, 12915718 - 12915777
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| ||||||||||| ||||    
T  12915718 ctccagaacattctggtcctaattaatctcaaccatattaatccagagttctctggtcct 12915777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 556
Target Start/End: Complemental strand, 18143328 - 18143274
Alignment:
Q  502 tctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctct 556  Q
    ||||||||||| |||||||| |||||||||| |||| ||||||| ||||||||||    
T  18143328 tctccagaataatctggtccaaattaatcacaaccatattaatccagagttctct 18143274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 420
Target Start/End: Complemental strand, 26194106 - 26194048
Alignment:
Q  363 acgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgtt 420  Q
    |||||||||||||||| |||||||  ||||||| | |||||||||||||||||||||||    
T  26194106 acgaagtgtggggactagaagtagttgggtttgatgaaccaggataactctcatgtgtt 26194048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 562
Target Start/End: Complemental strand, 18883066 - 18883006
Alignment:
Q  502 tctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||||||| |||||||| |||||||||  |||| ||||||| ||||||||||| ||||    
T  18883066 tctccagaataatctggtccaaattaatcataaccatattaatccagagttctctggtcct 18883006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 33592343 - 33592287
Alignment:
Q  151 atcatcttacaa-agtgtaaactagatatcaagtctattgggcttaatagtttgaga 206  Q
    |||||| ||||| ||||||| |||| | |||||||||||||||||||||||||||||    
T  33592343 atcatcatacaagagtgtaatctagttctcaagtctattgggcttaatagtttgaga 33592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 33592438 - 33592378
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    ||||||| ||| |||||||| ||||||||| || |||||||||||||||  ||||||||||    
T  33592438 atatttaccatctttatctcttttatttgagaatatctttttgagtttgcctttgtaaaag 33592378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 33601982 - 33601926
Alignment:
Q  151 atcatcttacaa-agtgtaaactagatatcaagtctattgggcttaatagtttgaga 206  Q
    |||||| ||||| ||||||| |||| | |||||||||||||||||||||||||||||    
T  33601982 atcatcatacaagagtgtaatctagttctcaagtctattgggcttaatagtttgaga 33601926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 33602077 - 33602017
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    ||||||| ||| |||||||| ||||||||| || |||||||||||||||  ||||||||||    
T  33602077 atatttaccatctttatctcttttatttgagaatatctttttgagtttgcctttgtaaaag 33602017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 42896358 - 42896302
Alignment:
Q  151 atcatcttacaa-agtgtaaactagatatcaagtctattgggcttaatagtttgaga 206  Q
    |||||| ||||| ||||||| |||| | |||||||||||||||||||||||||||||    
T  42896358 atcatcatacaagagtgtaatctagttctcaagtctattgggcttaatagtttgaga 42896302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 42896453 - 42896393
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    ||||||| ||| |||||||| ||||||||| || |||||||||||||||  ||||||||||    
T  42896453 atatttaccatctttatctcttttatttgagaatatctttttgagtttgcctttgtaaaag 42896393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 521
Target Start/End: Complemental strand, 7789049 - 7788985
Alignment:
Q  459 tacacgatatgcacacactatcaca--cacattaatatttatttatctccagaatattctggtcc 521  Q
    ||||| |||| ||||||||||||||  || || |||||||||| |||||||||| ||||||||||    
T  7789049 tacacaatatacacacactatcacactcatatgaatatttattaatctccagaacattctggtcc 7788985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 317; Significance: 1e-178; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 83 - 562
Target Start/End: Original strand, 11223223 - 11223705
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  |||||||||||||||||| |||||||||  |||||||| |||||    
T  11223223 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattagatccaaacaatcatcctacaaagtgataactagatctcaag 11223320  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  11223321 tctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacaggggtta 11223420  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  11223421 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctacc-actgtatactataatggataatctcacacgaagtgtggggactgga 11223519  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattctt----ctttctctgtccctctctctatcttttatttttacacgatatgcacacac 476  Q
    |||||||| ||||||| |||||||||||||||  ||||||||||||    || ||||| || ||||||||||||||||||||||||||||||||||||||    
T  11223520 agtagccgagtttggtgaaccaggataactcttttgtgttattcttctccctctctctctctctctctctatcttttatttttacacgatatgcacacac 11223619  T
Q  477 tatcacacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  11223620 tatcacaagcattaatatttatttatctccagaatgttctggtcctaattaatcacaaccaaattaatccagagttctctggtcct 11223705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 151 - 557
Target Start/End: Complemental strand, 42732847 - 42732445
Alignment:
Q  151 atcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtag 250  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||||| ||   | || ||||||||    
T  42732847 atcatcatacaaagtgtaaactagatctcaagtctattgggcttaatagtttgagatagaagagtttcaacctttcttgtgtga---tcaagaattgtag 42732751  T
Q  251 aagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagt 350  Q
    |||||||  |||||||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||    
T  42732750 aagcctgttgaggttgataatacaggggttctggactgatctggtgtgatcaagaccttatagtgctagttagaagtttctactagctgaatactatagt 42732651  T
Q  351 ggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatc 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    |||| ||| ||    
T  42732650 ggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcttgtgttattcttctttctct----ctctatctctc 42732555  T
Q  450 ttttatttttacacgatatgcacacactatcaca--cacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaa 547  Q
    |||||||||||||  |||| ||||||||||||||  || ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  42732554 ttttatttttacataatatacacacactatcacactcatattaatatttattaatctccagaatattctggtcctaattaatcacaaccaaattaatcca 42732455  T
Q  548 gagttctctg 557  Q
    ||||||||||    
T  42732454 gagttctctg 42732445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 83 - 446
Target Start/End: Complemental strand, 33955840 - 33955476
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  || |||||||||||||  | |||||||||||||| ||||||||| |  |||||||| |||||    
T  33955840 tttgtttgagacgcta-gatccaaacaacatctttct-tacttttgtttgagacattcgatccaaacaatcaccttacaaagagataactagatctcaag 33955743  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  33955742 tctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggtta 33955643  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33955642 cgtactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactgga 33955543  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  33955542 agtagccgggtttggtgaaccaggataactctcctgtgttattctctctctctctctctctctctct 33955476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 83 - 446
Target Start/End: Original strand, 20035846 - 20036210
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  |||||||||||||||| ||||||||| |  |||||||| |||||    
T  20035846 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattagatccaaacaatcaccttacaaagagataactagatctcaag 20035943  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||  |||||||||||| || |||||    
T  20035944 tctattgggcttaatagtttgagataggaagagttccaaccttttttgtgcgaaagcaaagaattgtagaagcctgctaaggttgataatatagtggtta 20036043  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  20036044 tggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgtatactatagtggataatctcacatgatgtgtggggactgga 20036143  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    |||||||||||||||| |||||||||||||||| | ||||||||| ||| ||||| || ||||||||    
T  20036144 agtagccgggtttggtgaaccaggataactctcctatgttattctctctctctctctctctctctct 20036210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 83 - 419
Target Start/End: Original strand, 20834277 - 20834614
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaa 181  Q
    |||||||||||||| | ||| ||||||||||| |  | || |||||||||||||  | ||||||||||| ||| ||||||||| |  |||||||| ||||    
T  20834277 tttgtttgagacgcca-gatccaaacaacatcttt-attacttttgtttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaa 20834374  T
Q  182 gtctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtt 280  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||| |||||| ||||    
T  20834375 gtctattgggcttaatagtttgacataggaagagttccaacctttcttgtgcgaaagcaaagaattggagaagcctgctgaggttgattatacagtggtt 20834474  T
Q  281 acagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgg 380  Q
    ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  20834475 acgaactgatctggtatgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacggagtgtggggactgg 20834574  T
Q  381 aagtagccgggtttggt-aaccaggataactctcatgtgt 419  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  20834575 aagtagccgggtttggtgaaccaggataactctcctgtgt 20834614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 178 - 425
Target Start/End: Complemental strand, 13815619 - 13815371
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||| |||||||||||||||||| |||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||||||||  ||||||||||||||| |    
T  13815619 tcaagtttattgggcttaatagtttaagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaagcctgttgaggttgataatacaag 13815521  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13815520 ggttacagaatgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacatgaagtgtgggga 13815421  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgttattct 425  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  13815420 ctggaagtagccggatttggtgaaccaggataactctcctgtgttattct 13815371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 151 - 446
Target Start/End: Original strand, 26652536 - 26652829
Alignment:
Q  151 atcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtag 250  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| | |||| |||||||||||||| ||   | || ||||||||    
T  26652536 atcatcatacaaagtgtaaactagatctcaagtctactgggcttaatagtttgagatagaagagttacaacctttcttgtgtga---tcaagaattgtag 26652632  T
Q  251 aagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagt 350  Q
    ||| |  | ||||||||||||||| |||||    |||||| ||||||||||||||||| |||||| | ||||||||||||||  | ||||||||||||||    
T  26652633 aagtccaccgaggttgataatacaagggttctgaactgatatggtgtgatcaagacctaatagtgctagttagaagtttctattagctgaatactatagt 26652732  T
Q  351 ggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||| |||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  26652733 ggattatctcacacgaagtgtggggactggaagtagtcaggtttggtgaaccagcataactctcctgtgttattcttctttctctctccctctctct 26652829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 151 - 446
Target Start/End: Original strand, 26924121 - 26924414
Alignment:
Q  151 atcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtag 250  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| | |||| |||||||||||||| ||   | || ||||||||    
T  26924121 atcatcatacaaagtgtaaactagatctcaagtctactgggcttaatagtttgagatagaagagttacaacctttcttgtgtga---tcaagaattgtag 26924217  T
Q  251 aagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagt 350  Q
    ||| |  | ||||||||||||||| |||||    |||||| ||||||||||||||||| |||||| | ||||||||||||||  | ||||||||||||||    
T  26924218 aagtccaccgaggttgataatacaagggttctgaactgatatggtgtgatcaagacctaatagtgctagttagaagtttctattagctgaatactatagt 26924317  T
Q  351 ggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||| |||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  26924318 ggattatctcacacgaagtgtggggactggaagtagtcaggtttggtgaaccagcataactctcctgtgttattcttctttctctctccctctctct 26924414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 178 - 413
Target Start/End: Complemental strand, 24244289 - 24244053
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||| ||||| ||||||||||||||||     
T  24244289 tcaagtctattgggctgaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaatcctgctgaggttgataatacaga 24244191  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||| ||||||| |||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24244190 ggttacaaactgatcgggtgtgatcaagacgttgtagtgttgattagaagtttctgccaactgaatactatagtggataatctcacacgaagtgtgggga 24244091  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctc 413  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  24244090 ctggaagtagccggatttggtgaaccaggataactctc 24244053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 178 - 413
Target Start/End: Complemental strand, 24290913 - 24290677
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||| ||||| ||||||||||||||||     
T  24290913 tcaagtctattgggctgaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaatcctgctgaggttgataatacaga 24290815  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||| ||||||| |||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24290814 ggttacaaactgatcgggtgtgatcaagacgttgtagtgttgattagaagtttctgccaactgaatactatagtggataatctcacacgaagtgtgggga 24290715  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctc 413  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  24290714 ctggaagtagccggatttggtgaaccaggataactctc 24290677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 22489126 - 22489396
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||||||| |||| |||||||||||||||||    
T  22489126 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtagaagtctgctgaggttgataatacagg 22489224  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || || |||||||||||||||||||||| ||||||||| | || | ||||||||   | |||  ||  |||||||||||||||||||||||| ||||||    
T  22489225 tgtaacggactgatctggtgtgatcaagatcttatagtgctagtcataagtttctgttagcaa--gacaactatagtggataatctcacacgaggtgtgg 22489322  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| || ||||||||    
T  22489323 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctctctctctctctct 22489396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 434
Target Start/End: Original strand, 24412769 - 24413027
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  24412769 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 24412867  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||||||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  24412868 ggttacagactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 24412965  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| |||||    
T  24412966 ggactggaagtagccggatttggtgaaccaggataactctcctgtgttattcttctctctct 24413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 24422218 - 24422488
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  24422218 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 24422316  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  24422317 ggttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 24422414  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||| || ||||||||    
T  24422415 ggactggaagtagccggatttggtgaaccaggataactctcctgtgttattcttctctctctctctctctctct 24422488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 30459506 - 30459236
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  30459506 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgccgaggttgataatacagg 30459408  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  30459407 tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 30459310  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||| || ||||||||    
T  30459309 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttatttttctctctctctctctctctct 30459236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 287 - 446
Target Start/End: Complemental strand, 22448467 - 22448307
Alignment:
Q  287 tgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtag 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22448467 tgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgtatactatagtggataatctcacacgaagtgtggggactggaagtag 22448368  T
Q  387 ccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||| || ||| |||||||||||||||| |||||||||  ||| ||||| || ||||||||    
T  22448367 ccggattgggtgaaccaggataactctcttgtgttatttctctctctctctctctctctct 22448307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 30454448 - 30454178
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  30454448 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagg 30454350  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  30454349 tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 30454252  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| | ||| || ||||||||    
T  30454251 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttatttttctctttctctctctctctct 30454178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 18568979 - 18569251
Alignment:
Q  180 aagtctattgggcttaatagttt--gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacag 275  Q
    |||||||||||||||||||||||  ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||    
T  18568979 aagtctattgggcttaatagtttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacag 18569077  T
Q  276 gggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtg 372  Q
     |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| |||||    
T  18569078 aggttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtg 18569175  T
Q  373 gggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  18569176 gggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctctctctctctctctct 18569251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 30445076 - 30444806
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  30445076 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagg 30444978  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     ||||  ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  30444977 tgttatggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 30444880  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||  ||| ||||| || ||||||||    
T  30444879 ggactggaagtagccgggtttggtgaatcaggataactctcctgtgttatttctctctctctctctctctctct 30444806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 4635886 - 4636156
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||| |||||| ||| |  ||  ||| |||||||||||||||| ||||||||||| |||||    
T  4635886 aagtctattgggcttaatagttttgagatagaaaa-ttccaacatttcttttgctagtgtgcaaagaattgtagaagcctgctgaggttgataaaacagg 4635984  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || || ||||||| |||||||||||||| ||||||||| |||| |||||||||   || |||  ||  ||||||||||||||||||||  || ||||||    
T  4635985 tgtaacggactgatatggtgtgatcaagatcttatagtgctggtcagaagtttctgttagcaa--gacaactatagtggataatctcacgtgaggtgtgg 4636082  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||||||| ||| ||||| || ||||||||    
T  4636083 ggactgaaaatagccgggtttggtgaaccaggataactctcatgtgttattcctctctctctctctctctctct 4636156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 11223142 - 11223249
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  11223142 ttgagaacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacacaaagatccaaacaacatcctac-atatttttgtttgagacgctaga 11223240  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  11223241 tccaaacaa 11223249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 218 - 392
Target Start/End: Complemental strand, 22118310 - 22118134
Alignment:
Q  218 caacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgt 316  Q
    |||| ||||||||||||||| ||| |||||||||||| ||| || ||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  22118310 caacgtttcttgtgcgaaagcaaataattgtagaagcatgctgatgttgataatacaggatgtaacagactgatctggtgtgatcaagaccttatagtgt 22118211  T
Q  317 tggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggt 392  Q
    |  | |||||||||   || |||  ||  |||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  22118210 tattcagaagtttctgttagcaa--gacaactataatggataatctcacacgaggtgtggggactggaagtagtcgggt 22118134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 172 - 390
Target Start/End: Complemental strand, 31150876 - 31150669
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  31150876 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 31150789  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||   | | | ||||||||||||||||||||||||| ||||    
T  31150788 acagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataatctcacacgtagtg 31150689  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  31150688 tggggactggacgtagccgg 31150669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 172 - 390
Target Start/End: Original strand, 5600524 - 5600731
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  5600524 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 5600611  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||   | | | |||||||||||||||||||||||||  |||    
T  5600612 acagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataatctcacacgtggtg 5600711  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  5600712 tggggactggacgtagccgg 5600731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 172 - 390
Target Start/End: Original strand, 5610170 - 5610377
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  5610170 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 5610257  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||   | | | |||||||||||||||||||||||||  |||    
T  5610258 acagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataatctcacacgtggtg 5610357  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  5610358 tggggactggacgtagccgg 5610377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 557
Target Start/End: Original strand, 26652879 - 26652968
Alignment:
Q  470 cacacactatcacacacat--taatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    ||||||||||||||| |||  ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  26652879 cacacactatcacactcatattaatatttattaatctccagaatattatggtcctaattaatcacaaccaaattaatctagagttctctg 26652968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 557
Target Start/End: Original strand, 26924464 - 26924553
Alignment:
Q  470 cacacactatcacacacat--taatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    ||||||||||||||| |||  ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  26924464 cacacactatcacactcatattaatatttattaatctccagaatattatggtcctaattaatcacaaccaaattaatctagagttctctg 26924553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 20035764 - 20035872
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| ||||||||||||| || ||||||||||||||||| ||  ||| || ||||||||||||||||    |||||||||||||||||||    
T  20035764 ttgagaacatatttctgagtttgtatttatacaaggatagtttgtttgacacataaatatccaaacaacatcctacacatcttttgtttgagacgctaga 20035863  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  20035864 tccaaacaa 20035872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 284 - 351
Target Start/End: Complemental strand, 22457788 - 22457720
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttcta-ccaactgaatactatagtg 351  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  22457788 gactgatctggtgtgatcatgaccttatagtgttggttagaagtttctacccaactgtatactatagtg 22457720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 341 - 426
Target Start/End: Complemental strand, 37514942 - 37514856
Alignment:
Q  341 atactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattctt 426  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||| |||| | |||||| |||| |||||||||||||||||    
T  37514942 atactatagtggataatctcacacaaggtgtggggactagaagtagccggctttgatgaaccagtataaatctcatgtgttattctt 37514856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 33955897 - 33955814
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa 151  Q
    |||||| ||||||||||||||||| |   |||| ||||||||||||||||||    ||||||||||||||||||||||||||||    
T  33955897 tttgtacaaggatagtttgtttgacatataaagtttcaaacaacatcctacacatcttttgtttgagacgctagatccaaacaa 33955814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 557
Target Start/End: Complemental strand, 22118002 - 22117913
Alignment:
Q  470 cacacactatcacac--acattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    |||||||||||||||  | |||||||| |||| |||| || ||||||| |||||||||||||||| | |||||||||| |||||||||||    
T  22118002 cacacactatcacacttatattaatatctattaatcttcaaaatattcaggtcctaattaatcacaatcaaattaatccagagttctctg 22117913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 22448538 - 22448478
Alignment:
Q  151 atcatcttacaa-agtgtaaactagatatcaagtctattgggcttaatagtttgagatagg 210  Q
    |||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  22448538 atcatcatacaagagtgtaaactagatctaaagtctattgggcttaatagtttgagatagg 22448478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 22457856 - 22457796
Alignment:
Q  151 atcatcttacaa-agtgtaaactagatatcaagtctattgggcttaatagtttgagatagg 210  Q
    |||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  22457856 atcatcatacaagagtgtaaactagatcttaagtctattgggcttaatagtttgagatagg 22457796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 22457951 - 22457891
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||||||| ||||||||||    
T  22457951 atatttatcatctttatctcttttatttgagaatatctttttgagtttgtctttgtaaaag 22457891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 22448633 - 22448573
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||||||  ||||||||||    
T  22448633 atatttatcatctttatctcttttatttgagaatatctttttgagtttgcctttgtaaaag 22448573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 26652449 - 26652496
Alignment:
Q  29 tttatctcatttatttgataacatctttttgagtttgtatttgtaaaa 76  Q
    ||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  26652449 tttatctcatttaattgagaacatctttttgagtttgtgtttgtaaaa 26652496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 26924034 - 26924081
Alignment:
Q  29 tttatctcatttatttgataacatctttttgagtttgtatttgtaaaa 76  Q
    ||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  26924034 tttatctcatttaattgagaacatctttttgagtttgtgtttgtaaaa 26924081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 503 - 562
Target Start/End: Complemental strand, 33955408 - 33955349
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||||||||||||| |||||||||| | |||| ||||||| ||||||||||| ||||    
T  33955408 ctccagaatattctggttctaattaatctcaaccatattaatccagagttctctggtcct 33955349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 390
Target Start/End: Original strand, 16111002 - 16111038
Alignment:
Q  354 taatctcacacgaagtgtggggactggaagtagccgg 390  Q
    |||||||||||||||||| ||||||||||||||||||    
T  16111002 taatctcacacgaagtgtcgggactggaagtagccgg 16111038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 17554033 - 17553997
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagata 208  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17554033 tagatctcaagtctattgggcttaatagtttgagata 17553997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 446
Target Start/End: Complemental strand, 22457723 - 22457643
Alignment:
Q  367 agtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| || ||| ||| |||||||||||  |||||||||  ||| ||||| || ||||||||    
T  22457723 agtgtggggactggaagtagccggattgggtgaacaaggataactcttctgtgttatttctctctctctctctctctctct 22457643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 562
Target Start/End: Original strand, 20038476 - 20038535
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||| ||||||||||||||||||| | |||| ||||||  ||||||||||| ||||    
T  20038476 ctccagaacattctggtcctaattaatctcaaccatattaatgcagagttctctggtcct 20038535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 20834220 - 20834303
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa 151  Q
    |||||| ||||||||||||||||| |   |||| | |||||| |||||||||    ||||||||||||||| ||||||||||||    
T  20834220 tttgtacaaggatagtttgtttgacatataaagttccaaacagcatcctacacatcttttgtttgagacgccagatccaaacaa 20834303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 317
Target Start/End: Original strand, 16110860 - 16110962
Alignment:
Q  216 tccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacag-gggttacagactgatctggtgtgatcaagaccttatagt 314  Q
    ||||||||||||||  |||||| ||| ||||||| || ||||  || |||||||||||||   || ||||| || |||||||||||||||| | ||||||    
T  16110860 tccaacctttcttgaacgaaagcaaataattgtataaacctgttgatgttgataatacagaatgtaacagattggtctggtgtgatcaagaacatatagt 16110959  T
Q  315 gtt 317  Q
    |||    
T  16110960 gtt 16110962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 17553874 - 17553829
Alignment:
Q  343 actatagtggataatctcacacgaagtgtggggactggaagtagcc 388  Q
    ||||||||||| |||||||||| ||||||||||||| || ||||||    
T  17553874 actatagtggaaaatctcacacaaagtgtggggactagacgtagcc 17553829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 310; Significance: 1e-174; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 83 - 562
Target Start/End: Original strand, 1956 - 2435
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  | |||||||||||||| ||||||||| |  |||||||| |||||    
T  1956 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattcgatccaaacaatcaccttacaaagagataactagatctcaag 2053  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||    
T  2054 tctatttggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagggatta 2153  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2154 cggactgatctggtgtgatcaagaccttatagtgttggttagaagtttataccaactgtatactatagtggataatctcacacgaagtgtggggactgga 2253  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacacactatc 480  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||  | |||||||||||||||||||||||||||||| |||||||| ||    
T  2254 agtagccgggtttggtgaaccaggataactctcttgtgttattcttctttctctccctctctctctatcttttatttttacacgatattcacacactgtc 2353  T
Q  481 acacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||  |||||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||| ||||||||||| ||||    
T  2354 acaagcattaatatttatttatctccagaatgttctgttcctaattaatcacaaacaaattaatccagagttctctggtcct 2435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 1874 - 1982
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| ||||||||||||  || ||||||||||||||||| |   |||| | ||||||||||||||||    |||||||||||||||||||    
T  1874 ttgagaacatatttctgagtttgtattcatacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgctaga 1973  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  1974 tccaaacaa 1982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 87 - 556
Target Start/End: Complemental strand, 17512560 - 17512088
Alignment:
Q  87 tttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaagtcta 186  Q
    |||||||| ||||||| ||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||  |||||||| |||||||||    
T  17512560 tttgagacacaaagatccaaacaacatcctacatattttttgtttgagacgctagatccaaacaatcatcctacaaagtgataactagatctcaagtcta 17512461  T
Q  187 ttgggcttaatagtttgagataggaaa-gttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacaga 285  Q
    |||||||||||||||| |||||||||| |||||||||||||| ||||| ||  ||| ||||||||||||||||  ||||||||||||||||| |||||||    
T  17512460 ttgggcttaatagttttagataggaaaagttccaacctttctcgtgcgtaaacaaagaattgtagaagcctgctaaggttgataatacaggg-ttacaga 17512362  T
Q  286 ctgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagta 385  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  17512361 ctgatctagtgtgatcaagactttatagtgttggttagaagtttctaccaactgtatactatagtggataatctcacaagaagtgtggggactgaaagta 17512262  T
Q  386 gccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgt--ccctctctctatcttttatttttacacgatatgcacacactatcac 482  Q
    |||| ||||||| |||||||||||||||  |||||||||||||||||||| |  | |||||||||||||||| |||||||||||||||||||||||||||    
T  17512261 gccgagtttggtgaaccaggataactcttctgtgttattcttctttctctcttcctctctctctatcttttacttttacacgatatgcacacactatcac 17512162  T
Q  483 acacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctct 556  Q
    |   ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||||||||    
T  17512161 aagtattaatatttatttatctccagaatgttctggtccaaattaatcacaaccaaattaatccagagttctct 17512088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 124 - 425
Target Start/End: Original strand, 22066178 - 22066482
Alignment:
Q  124 ttttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaa-gttccaac 221  Q
    |||||||||||||  | ||||||||||| ||| ||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  22066178 ttttgtttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaaaagttccaac 22066277  T
Q  222 ctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggtt 321  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  22066278 ctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctagtgtgatcaagaccttatagtgttggtt 22066377  T
Q  322 agaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgtt 420  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  22066378 agaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtt 22066477  T
Q  421 attct 425  Q
    |||||    
T  22066478 attct 22066482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 124 - 421
Target Start/End: Original strand, 23884377 - 23884677
Alignment:
Q  124 ttttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttccaac 221  Q
    |||||||||||||  | ||||||||||| ||| ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  23884377 ttttgtttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaagagttccaac 23884476  T
Q  222 ctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggtt 321  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  23884477 ctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggtt 23884576  T
Q  322 agaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgtt 420  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  23884577 agaagtttctaccaactgcatactatagtggacaatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtt 23884676  T
Q  421 a 421  Q
    |    
T  23884677 a 23884677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 180 - 434
Target Start/End: Complemental strand, 23895863 - 23895605
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  23895863 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagg 23895765  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || || ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  23895764 tgtaacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 23895667  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  23895666 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctct 23895605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 243 - 557
Target Start/End: Original strand, 14102312 - 14102624
Alignment:
Q  243 aattgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaact 338  Q
    ||||||||||| |||| |||||| ||||||||||| || |||| |||||||| |||||||||||||||| |||| | || | ||||||||   | |||      
T  14102312 aattgtagaagtctgctgaggttaataatacagggtgtaacaggctgatctgttgtgatcaagaccttacagtgctagtcaaaagtttctgttagcaa-- 14102409  T
Q  339 gaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtc 437  Q
    ||  ||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||| |||   |||||||||||||       ||    
T  14102410 gacaactatagtggataatctcacaagaggtgtggggactggaagtagccgggtttggtgaaccaggataattcttcagtgttattcttct-------tc 14102502  T
Q  438 cctctctctatcttttatttttacacgatatgcacacactatcaca--cacattaatatttatttatctccagaatattctggtcctaattaatcacgac 535  Q
    ||| ||||| |  ||||    ||||| |||| ||||||||||||||  || ||||||||||||| ||||| |||||||||| | ||||||||||||| ||    
T  14102503 cctttctcttttatttaaggctacacaatatacacacactatcacactcatattaatatttattaatctctagaatattcttgccctaattaatcacaac 14102602  T
Q  536 caaattaatcaagagttctctg 557  Q
    |||||||||| |||||||||||    
T  14102603 caaattaatccagagttctctg 14102624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 180 - 444
Target Start/End: Original strand, 18420492 - 18420760
Alignment:
Q  180 aagtctattgggcttaatagtttg-agataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  18420492 aagtctattgggcttaatagtttggagatagaaaa-ttccaacctttcttttgctattgtgcaaagaattgtataagcctgctgaggttgataatacagg 18420590  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || || ||||||||||||||||||||||  |  ||||| | || ||||||||||   | |||  ||| ||||||||| |||||||||||||| |||| |    
T  18420591 tgtaacggactgatctggtgtgatcaagatttgttagtgctagtcagaagtttctgttagcaa--gaaaactatagtgtataatctcacacgaggtgtcg 18420688  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctct 444  Q
    ||||||||||||||||||||| || ||||||||||||| || |||||||||||||| ||||| || ||||||    
T  18420689 ggactggaagtagccgggttttgtgaaccaggataactatcctgtgttattcttctctctctctctctctct 18420760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 557
Target Start/End: Complemental strand, 11421611 - 11421322
Alignment:
Q  265 tgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcaca 363  Q
    |||||||||| || || ||||||||||||||||||||||||| ||||||||||| || |||| ||| |   |||   |||||||||||||||||||||||    
T  11421611 tgataatacatggtgtaacagactgatctggtgtgatcaagatcttatagtgttagtcagaattttttgttaacatgatactatagtggataatctcaca 11421512  T
Q  364 cgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatcttttattt---tt 459  Q
    ||| ||||||||||||||||||||||| |||| | ||| ||||||| | || ||||||||| |||||       || | |||||   ||||||||   ||    
T  11421511 cgaggtgtggggactggaagtagccggatttgatgaactaggataattatcttgtgttattgttctt-------ccatttctct---ttttatttaagtt 11421422  T
Q  460 acacgatatgcacacactatcacacacat--taatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    ||| ||||| ||||||||||||||| |||  ||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||    
T  11421421 acatgatatacacacactatcacactcatattaatatttattaatctccagaatattatggtactaattaatcacaaccaaattaatccagagttctctg 11421322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 413 - 562
Target Start/End: Original strand, 2850629 - 2850782
Alignment:
Q  413 catgtgttattcttctttctctgtccctctctc----tatcttttatttttacacgatatgcacacactatcacacacattaatatttatttatctccag 508  Q
    |||||||||||||||||||||| |||||| |||    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||    
T  2850629 catgtgttattcttctttctctctccctccctccctctatcttttatttttagacaatatgcacacaccatcacacacattaatatttatttatcttcag 2850728  T
Q  509 aatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||||| ||||    
T  2850729 aatattctggtcctaattaatcaaaaccaaattaattcagagttctctggtcct 2850782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 440 - 562
Target Start/End: Complemental strand, 8668751 - 8668629
Alignment:
Q  440 tctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaa 539  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  ||| || |||||||||||| ||||||    
T  8668751 tctctctctcttttatttttacacgatatgcacacactatcacaagcattaatatttatttatctccagaatgctctagtactaattaatcacaaccaaa 8668652  T
Q  540 ttaatcaagagttctctgctcct 562  Q
    |||||| ||||||||||| ||||    
T  8668651 ttaatccagagttctctggtcct 8668629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 17512646 - 17512553
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagac 136  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   ||||| ||||||||    
T  17512646 ttgagaacatctttctgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagatccaaacaacatcctacatattttttctttgagac 17512553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 260 - 423
Target Start/End: Complemental strand, 10259944 - 10259779
Alignment:
Q  260 gaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatc 358  Q
    |||||| ||||||||||| || || ||||||||||||||||||||||  |||||||| | || ||||||||||   | | | ||||||||||||| ||||    
T  10259944 gaggtttataatacagggtgtaacggactgatctggtgtgatcaagaatttatagtgctagtcagaagtttctcttagcaggatactatagtggagaatc 10259845  T
Q  359 tcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttatt 423  Q
     ||||||||||||| |||||||||||||| || |||||| |||||| |||| |||| |||||||||    
T  10259844 ccacacgaagtgtgaggactggaagtagctggatttggtgaaccagaataattctcctgtgttatt 10259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 13218265 - 13218429
Alignment:
Q  151 atcatcttacaaagtgtaaactagatatcaagtctattgggctt-aatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta 249  Q
    |||||| | |||||||||| |||| | ||||||||||| || || |||| |||||||||| ||||||||||| |||||||||| |||| | || ||||||    
T  13218265 atcatcattcaaagtgtaatctaggtctcaagtctatttggttttaataatttgagatagaaaagttccaacttttcttgtgcaaaagcataagattgta 13218364  T
Q  250 gaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagt 314  Q
     |||| ||  ||||||||||||| || | || |  |||| |||||||||||||| ||||||||||    
T  13218365 taagcttgttgaggttgataatatagtgattccgaactggtctggtgtgatcaataccttatagt 13218429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 429
Target Start/End: Original strand, 12173401 - 12173614
Alignment:
Q  218 caacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacaga-ctgatctggtgtgatcaagaccttatagtgt 316  Q
    ||||||||||||| |  || ||||||||||||||||||| |  ||||| ||  ||||||  |||  || ||||||||||||||||||||  |||| |||     
T  12173401 caacctttcttgtccagaattaaaaaattgtagaagcctactaaggtttattttacaggatttaacgaactgatctggtgtgatcaagaatttatggtgc 12173500  T
Q  317 tggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcat 415  Q
    | || | ||||||||   | |   ||||||||||||||||||| |||| | |||||||||||| ||||||||| ||||||| ||| | ||||| |||||     
T  12173501 tagtcataagtttctgttagcatgatactatagtggataatcttacacaaggtgtggggactgaaagtagccgagtttggtgaactatgataaatctcag 12173600  T
Q  416 gtgttattcttctt 429  Q
    ||||||||||||||    
T  12173601 gtgttattcttctt 12173614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 387
Target Start/End: Complemental strand, 23110401 - 23110256
Alignment:
Q  243 aattgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaa 341  Q
    |||| ||||||||||  || ||||||||||  ||| || | ||||| ||||||||||||||||| | ||||||| | || ||||||||||   | | |||    
T  23110401 aattttagaagcctgttgatgttgataatattgggtgtaatagacttatctggtgtgatcaagaacatatagtgctagtcagaagtttctgttagccgaa 23110302  T
Q  342 tactatagtggataatctcacacgaagtgtggggactggaagtagc 387  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||    
T  23110301 tactatagtggataatctaacacggggtgtggggactggaagtagc 23110256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 24564756 - 24564649
Alignment:
Q  281 acagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgg 380  Q
    ||||| ||||||| ||||||||||| | |||||||||  | |||||||||||  |  |||||| ||||||||| ||||||| ||||||||||| |||||     
T  24564756 acagattgatctgatgtgatcaagaacatatagtgttattcagaagtttctagtagttgaatattatagtggacaatctcatacgaagtgtggagactga 24564657  T
Q  381 aagtagcc 388  Q
    ||||||||    
T  24564656 aagtagcc 24564649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 12414995 - 12415045
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagatag 209  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  12414995 tacaaagtgtaa-ctagatctcaagtctattgggcttaatagtttgagatag 12415045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 23884281 - 23884364
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa 151  Q
    |||||| ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||||| ||||||||||||    
T  23884281 tttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgccagatccaaacaa 23884364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 22066082 - 22066164
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaaca 150  Q
    |||||| ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||||| |||||||||||    
T  22066082 tttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgccagatccaaaca 22066164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 121 - 562
Target Start/End: Original strand, 35877399 - 35877852
Alignment:
Q  121 tatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttcca 219  Q
    ||||||||||||||||  | |||||||||||||| ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  35877399 tatttttgtttgagacattcgatccaaacaatcaccttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaagagttcca 35877498  T
Q  220 acctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttgg 319  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  35877499 acctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacgaactgatctggtgtgatcaagaccttatagtgttgg 35877598  T
Q  320 ttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtg 418  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  35877599 ttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatg 35877698  T
Q  419 ttattcttctttctctgtcc----------ctctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttatttatctccag 508  Q
    |||||||| ||||||| |||          |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  35877699 ttattcttatttctctctccctctctctctctctctctctcttttatttttacacgatatgcacacactatcacaagcattaatatttatttatctccag 35877798  T
Q  509 aatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  35877799 aatgttctggtcctaattaatcacaaccaaattaatccagagttctctggtcct 35877852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 121 - 562
Target Start/End: Original strand, 35884888 - 35885341
Alignment:
Q  121 tatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttcca 219  Q
    ||||||||||||||||  | |||||||||||||| ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  35884888 tatttttgtttgagacattcgatccaaacaatcaccttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaagagttcca 35884987  T
Q  220 acctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttgg 319  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  35884988 acctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacgaactgatctggtgtgatcaagaccttatagtgttgg 35885087  T
Q  320 ttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtg 418  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  35885088 ttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatg 35885187  T
Q  419 ttattcttctttctctgtcc----------ctctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttatttatctccag 508  Q
    |||||||| ||||||| |||          |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  35885188 ttattcttatttctctctccctctctctctctctctctctcttttatttttacacgatatgcacacactatcacaagcattaatatttatttatctccag 35885287  T
Q  509 aatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  35885288 aatgttctggtcctaattaatcacaaccaaattaatccagagttctctggtcct 35885341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 121 - 562
Target Start/End: Original strand, 36724601 - 36725054
Alignment:
Q  121 tatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttcca 219  Q
    ||||||||||||||||  | |||||||||||||| ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  36724601 tatttttgtttgagacattcgatccaaacaatcaccttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaagagttcca 36724700  T
Q  220 acctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttgg 319  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  36724701 acctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacgaactgatctggtgtgatcaagaccttatagtgttgg 36724800  T
Q  320 ttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtg 418  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  36724801 ttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatg 36724900  T
Q  419 ttattcttctttctctgtcc----------ctctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttatttatctccag 508  Q
    |||||||| ||||||| |||          |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  36724901 ttattcttatttctctctccctctctctctctctctctctcttttatttttacacgatatgcacacactatcacaagcattaatatttatttatctccag 36725000  T
Q  509 aatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  36725001 aatgttctggtcctaattaatcacaaccaaattaatccagagttctctggtcct 36725054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 121 - 446
Target Start/End: Original strand, 3396806 - 3397134
Alignment:
Q  121 tatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttcca 219  Q
    ||||||||||||||||  |||||||||||||||| ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  3396806 tatttttgtttgagacattagatccaaacaatcaccttacaaagagacaactagatctcaagtctattgggcttaatagtttgagataggaagagttcca 3396905  T
Q  220 acctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttgg 319  Q
    |||||||||||||||||| ||| |||| |||||| |||| |||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  3396906 acctttcttgtgcgaaagcaaagaattttagaagtctgctgaggttgataatacaatggttacggactgatctggtgtgatcaagaccttatagtgttgg 3397005  T
Q  320 ttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtg 418  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||| ||||    
T  3397006 ttagaagtttctaccaactgtatactatagtggataatctcacacgaagtgtggggactagaagtagctgggtttggtgaaccatgataactctcctgtg 3397105  T
Q  419 ttattct-tctttctctgtccctctctct 446  Q
    ||| ||| ||| ||||| || ||||||||    
T  3397106 ttactctctctctctctctctctctctct 3397134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 178 - 557
Target Start/End: Original strand, 14273144 - 14273521
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacag 275  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||| |||||| ||| |  ||  ||| |||||||||||||||| ||||||||||||| ||    
T  14273144 tcaagtctattgggcttaatagtttaagatagaaaa-ttccaacatttcttttgctagtgtgcaaagaattgtagaagcctgctgaggttgataatatag 14273242  T
Q  276 gggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtg 372  Q
    | || |||||||||| ||||||||| |||| ||||||||| | || |||||||||   || |||  ||  |||||||||||||||||||||||| |||||    
T  14273243 gtgtaacagactgatatggtgtgattaagatcttatagtgctagtcagaagtttctgttagcaa--gacaactatagtggataatctcacacgaggtgtg 14273340  T
Q  373 gggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgca 471  Q
    | ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||       ||||| ||||| |  ||||    ||||| |||| ||    
T  14273341 gagactgaaagtagccgggtttggtgaaccaggataattctcgtgtgttattcttct-------tccctttctcttttatttaaagctacacaatataca 14273433  T
Q  472 cacactatca--cacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    ||||||||||  | || ||||||||||||| || |||||||||||||||||||||| |||||| |||||||||||| |||||| ||||    
T  14273434 cacactatcacgctcatattaatatttattaatatccagaatattctggtcctaatcaatcacaaccaaattaatccagagttatctg 14273521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 31710713 - 31710443
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| |||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||||||| |||| |||||||||||||||||    
T  31710713 aagtctattgggcttactagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtagaagtctgctgaggttgataatacagg 31710615  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || || |||||||||||||||||||||| ||||||||| | || ||||||||||   | |||  ||  |||||||||||||||||||||||| ||||||    
T  31710614 tgtaacggactgatctggtgtgatcaagatcttatagtgctagtcagaagtttctgttagcaa--gacaactatagtggataatctcacacgaggtgtgg 31710517  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| || ||||||||    
T  31710516 ggactggaagtagccgggtttggtgaacaaggataactctcatgtgttattcttctctctctctctctctctct 31710443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 24022989 - 24022719
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    |||||||||||| |||||||||| ||||||| ||| ||| |||||| ||| ||| |  ||  ||| |||||||||||||||  |||||||||||||||||    
T  24022989 aagtctattggggttaatagttttgagatagaaaatttc-aaccttccttttgctagtgtgcaaagaattgtagaagcctgttgaggttgataatacagg 24022891  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || || |||||||||||||||||||||| ||||||||| | || ||||||||||   | |||  ||  |||||||||||||||||||||||| ||||||    
T  24022890 tgtaacggactgatctggtgtgatcaagatcttatagtgctagtcagaagtttctgttagcaa--gacaactatagtggataatctcacacgaggtgtgg 24022793  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    | | |||||||||||||||||||| ||| ||||||||||||   |||||||||||| ||||| || ||||||||    
T  24022792 gaattggaagtagccgggtttggtgaacgaggataactctccaatgttattcttctctctctctctctctctct 24022719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 172 - 390
Target Start/End: Original strand, 22632346 - 22632553
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  22632346 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 22632433  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||||| || ||||||||||   | | | ||||||||||||||||||||||||| ||||    
T  22632434 acagagtgtaacggactgatctggtgtgatcaacatattatagtgttagtcagaagtttctgatagcaggatactatagtggataatctcacacgtagtg 22632533  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  22632534 tggggactggacgtagccgg 22632553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 172 - 390
Target Start/End: Original strand, 1800437 - 1800644
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  1800437 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 1800524  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||   | | | ||||||||||||||||||||||||| ||||    
T  1800525 acagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataatctcacacgtagtg 1800624  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  1800625 tggggactggacgtagccgg 1800644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 172 - 390
Target Start/End: Original strand, 1790943 - 1791146
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  1790943 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 1791030  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||      || ||||||||||||||||||||||||| ||||    
T  1791031 acagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctga----tggatactatagtggataatctcacacgtagtg 1791126  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  1791127 tggggactggacgtagccgg 1791146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 3396688 - 3396795
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| ||||||||||||| || ||||||||||||||||| ||  |||||| ||||||||||||||||    |||||||||||||||||||    
T  3396688 ttgagaacatatttctgagtttgtatttatataaggatagtttgtttgacacataaagatccaaacaacatcctacacatcttttgtttgagacgctaga 3396787  T
Q  143 tccaaaca 150  Q
    ||||||||    
T  3396788 tccaaaca 3396795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 16446667 - 16446739
Alignment:
Q  340 aatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactc 411  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| ||| ||| || | ||||||||||||    
T  16446667 aatactatagtggataatctcacacgaaatgtggggactgaaagtagtcggatttagtgatccaggataactc 16446739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 354 - 429
Target Start/End: Original strand, 29911278 - 29911354
Alignment:
Q  354 taatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctt 429  Q
    ||||||||||||| ||| |||||||||||| ||| || |||||| ||||| ||||| ||||||||||||||||||||    
T  29911278 taatctcacacgaggtgaggggactggaagcagctggatttggttaaccatgataaatctcatgtgttattcttctt 29911354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 427
Target Start/End: Original strand, 18578708 - 18578877
Alignment:
Q  260 gaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatc 358  Q
    |||||||||||||||||| || ||||| || |||||||| ||||||| ||||||||  | || | ||||||||   |   | ||| ||  ||| ||||||    
T  18578708 gaggttgataatacagggtgtaacagattggtctggtgttatcaagaacttatagtcctagtcaaaagtttctgttaggaggatattactgtgaataatc 18578807  T
Q  359 tcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttc 427  Q
    |||||| | |||||||||||| |||||| |||||||| | |||  |||||| ||||||||||||||||||    
T  18578808 tcacacaaggtgtggggactgaaagtagtcgggtttgatgaacatggataaatctcatgtgttattcttc 18578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 35877281 - 35877389
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| |||||||||| |  || ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||| |||||    
T  35877281 ttgagaacatatttatgagtttgtactcatacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacactaga 35877380  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  35877381 tccaaacaa 35877389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 35884770 - 35884878
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| |||||||||| |  || ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||| |||||    
T  35884770 ttgagaacatatttatgagtttgtactcatacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacactaga 35884869  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  35884870 tccaaacaa 35884878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 36724483 - 36724591
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| |||||||||| |  || ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||| |||||    
T  36724483 ttgagaacatatttatgagtttgtactcatacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacactaga 36724582  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  36724583 tccaaacaa 36724591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 556
Target Start/End: Original strand, 16446743 - 16446817
Alignment:
Q  483 acacattaatatttatttatctccagaatattctggtcctaa-ttaatcacgaccaaattaatcaagagttctct 556  Q
    ||||||||||||||||| ||||||||||||||||  | |||| |||||||| || ||| ||||| ||||||||||    
T  16446743 acacattaatatttattaatctccagaatattctaatactaatttaatcacaactaaagtaatccagagttctct 16446817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 562
Target Start/End: Original strand, 3397214 - 3397273
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||| ||||| ||||||||||||| | |||| ||||||| ||||||||||| ||||    
T  3397214 ctccagaacattctagtcctaattaatctcaaccatattaatccagagttctctggtcct 3397273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 294; Significance: 1e-165; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 83 - 562
Target Start/End: Complemental strand, 13328617 - 13328139
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  |||||| |||||||||  |||||||||||||||||||||||||| |  |||||||| |||||    
T  13328617 tttgtttgagacgcta-gatccaaacaacatctttct-tattttcgtttgagact-tagatccaaacaatcatcttacaaagagataactagatctcaag 13328521  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||| ||||||    
T  13328520 tctactgggattaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcttgctgaggttgataatacaagggtta 13328421  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13328420 cggactgatctggtgtgatcaagacctaatagtgttggttagaagtttctaccaactgtatactatagtggataatctcacacgaagtgtggggactgga 13328321  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacacactatc 480  Q
    ||||| |||||||||| ||||| |||||||||| ||||||||| ||||||||||  | ||||||||||||||||||| |||||||||| |||||||||||    
T  13328320 agtagtcgggtttggtgaaccaagataactctcctgtgttattattctttctctccctctctctctatcttttatttgtacacgatattcacacactatc 13328221  T
Q  481 acacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||  |||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||| ||||||||||| ||||    
T  13328220 acaggcattaatatttatttatctccagaatgttctggtcctaattaatcacaatcaaattaatccagagttctctggtcct 13328139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 43 - 498
Target Start/End: Original strand, 23486848 - 23487303
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||| | |   ||||| |||||||||  ||||    
T  23486848 ttgagaacatctttctgagtttgtatttgtacaaggatagtttgtttgagacgcta-gatccaaacaacatctttctc-attttcgtttgagacattaga 23486945  T
Q  143 tccaaacaatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaa 241  Q
    |||||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||    
T  23486946 tccaaacaatcatcttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaagagttccaagctttcttgtgcaaaagcaaa 23487045  T
Q  242 aaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaa 341  Q
     |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23487046 gaattgtagaagcctgctgaggttgataatacaagggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaa 23487145  T
Q  342 tactatagtggataatctcacacgaagtgtggggac--tggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtcc 438  Q
    |||||||||||||||||||||||||| |||||||||  |||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||| |||    
T  23487146 tactatagtggataatctcacacgaaatgtggggactgtggaagtaaccgggattggtgaaccaggataactctcctgtgttattcttctttctctctcc 23487245  T
Q  439 ctctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttat 498  Q
      ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  23487246 --ctctctatcttttatttttacacaatatgcacacactatcacactcattaatatttat 23487303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 83 - 446
Target Start/End: Complemental strand, 46305913 - 46305550
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||||| |  ||||||||||||||||  |  ||||||||||||| ||||||||| |  |||||||| |||||    
T  46305913 tttgtttgagacgcta-gatccaaacaacatccttct-tatttttgtttgagacattctatccaaacaatcaccttacaaagagataactagatctcaag 46305816  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  46305815 tctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggtta 46305716  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  46305715 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgtatactaaagtggataatctca-acgaagtgtggggactgga 46305617  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    |||||||||||||| | ||||| |||||||||| ||||||||||| ||| ||||| || ||||||||    
T  46305616 agtagccgggtttgatgaaccaagataactctcctgtgttattctctctctctctctctctctctct 46305550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 83 - 420
Target Start/End: Original strand, 5385537 - 5385874
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  |||||||||||||||| ||| ||||| |  |||||||| |||||    
T  5385537 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattagatccaaacaatcaccttccaaagaggtaactagatctcaag 5385634  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||| |||||    
T  5385635 tctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgatgatacagtggtta 5385734  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  5385735 catactgatctggtgtgatcaagaccttatagtgttggttagaagtttctatcagctgtatactatagtggataatctcacacgaagtgtggggactgga 5385834  T
Q  382 agtagccgggtttggt-aaccaggataactctcatgtgtt 420  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  5385835 agtagccgggtttggtgaaccaggataactctcctgtgtt 5385874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 180 - 450
Target Start/End: Complemental strand, 28367900 - 28367626
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  28367900 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 28367802  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  28367801 ggttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 28367704  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatct 450  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| || ||||||||||||    
T  28367703 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctctctctctctctctatct 28367626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 434
Target Start/End: Complemental strand, 24794793 - 24794535
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  24794793 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 24794695  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  24794694 ggttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 24794597  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  24794596 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctct 24794535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 434
Target Start/End: Complemental strand, 28375718 - 28375460
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  28375718 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 28375620  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  28375619 ggttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 28375522  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  28375521 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctct 28375460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 180 - 434
Target Start/End: Complemental strand, 28383540 - 28383282
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  28383540 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 28383442  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  28383441 ggttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 28383344  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  28383343 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctct 28383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 180 - 434
Target Start/End: Complemental strand, 28351967 - 28351709
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| ||||||||  |||||||||||||||     
T  28351967 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctaaggttgataatacaga 28351869  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  28351868 ggttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 28351771  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||    
T  28351770 ggactggaagtagccgggtttggtgaaccagcataactctcctgtgttattcttctctctct 28351709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 38529424 - 38529154
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||||| |||| ||||||| ||| |||||||||||||| ||| |  ||  ||| |||||||||||||| | ||||||||||||||| |    
T  38529424 aagtctattgggcttaatcgttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtagaagcctactgaggttgataatacaag 38529326  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     || ||||||| ||||||||||||||||| ||||||||| | || |||| |||||   | |||  ||  |||||||||||||||||||||||| ||||||    
T  38529325 tgtaacagactcatctggtgtgatcaagatcttatagtgctagtcagaaatttctgttagcaa--gacaactatagtggataatctcacacgaggtgtgg 38529228  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    | |||||||||||||||||||||| ||| | |||||||||| ||| |||||| ||| ||||| || ||||||||    
T  38529227 gcactggaagtagccgggtttggtgaactatgataactctcctgtattattcctctctctctctctctctctct 38529154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 182 - 426
Target Start/End: Original strand, 4951537 - 4951784
Alignment:
Q  182 gtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgc--gaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggt 279  Q
    ||||||| ||||||||||||||||||| |||| || ||||||||||| |||  |   ||||| ||||||||||| |||  ||||||||||||||||| ||    
T  4951537 gtctatttggcttaatagtttgagata-gaaaatttcaacctttcttttgctagtgtgtaaagaattgtagaaggctgttgaggttgataatacaggtgt 4951635  T
Q  280 tacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
     ||||||||||||||||||| ||| ||||| ||||| | || |||| ||||   || |||  ||  | |||||||||||||||||||||| ||||| |||    
T  4951636 aacagactgatctggtgtgaccaataccttgtagtgctagtcagaaatttctgttagcaa--gacaaatatagtggataatctcacacgaggtgtgagga 4951733  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgttattctt 426  Q
    || ||||||| || ||||||| ||||| |||||||||||||||||||||||    
T  4951734 cttgaagtagtcgagtttggtgaaccaagataactctcatgtgttattctt 4951784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 470 - 557
Target Start/End: Complemental strand, 7783950 - 7783863
Alignment:
Q  470 cacacactatcacacacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  7783950 cacacactatcacactcattaatatttattaatctccagaatattctggtcctaattaatcacaaccaatttaatcaagagttctctg 7783863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 390
Target Start/End: Original strand, 54624586 - 54624806
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctg 257  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||         | | ||||||||| ||   | || ||| |||||||||||    
T  54624586 tacaaagtgtaa-ctagatctcaagtctattgggcttaatagtttgagatag---------atcttttcttgtgtga---tcaagaatcgtagaagcctg 54624672  T
Q  258 cggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataa 356  Q
    | |||||||||||||||| | || ||||||||||||||| ||||||| |  |||||||| |  | ||||||||||   | | | ||||||||||||||||    
T  54624673 ctgaggttgataatacagagtgtaacagactgatctggtatgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataa 54624772  T
Q  357 tctcacacgaagtgtggggactggaagtagccgg 390  Q
    ||||||||| ||||||||||||||| ||||||||    
T  54624773 tctcacacgtagtgtggggactggacgtagccgg 54624806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 218 - 331
Target Start/End: Complemental strand, 7784215 - 7784101
Alignment:
Q  218 caacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgt 316  Q
    |||||||||||||  ||| | ||| |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  7784215 caacctttcttgtaggaaggaaaagaattgtagaagcctgctgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaccttatagtgt 7784116  T
Q  317 tggttagaagtttct 331  Q
    | || | ||||||||    
T  7784115 tagtcataagtttct 7784101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 172 - 390
Target Start/End: Complemental strand, 17530102 - 17529895
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  17530102 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 17530015  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||   | | | ||||||||||||||||||||||||| ||||    
T  17530014 acagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataatctcacacgtagtg 17529915  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  17529914 tggggactggacgtagccgg 17529895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 13328699 - 13328591
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||| |   |||||| ||||||||||||||||    |||||||||||||||||||    
T  13328699 ttgagaacatctttctgagtttgtatttgtacaaggatagtttgtttgacatataaagatccaaacaacatcctacacatcttttgtttgagacgctaga 13328600  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  13328599 tccaaacaa 13328591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 247 - 390
Target Start/End: Original strand, 32877877 - 32878021
Alignment:
Q  247 gtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatact 345  Q
    |||||||||||| |||||||||||||||| | || ||||||||||||||||||||||| |  ||||||||||  | |||||||| |   | |   |||||    
T  32877877 gtagaagcctgctgaggttgataatacagagtgtaacagactgatctggtgtgatcaacaaattatagtgttattcagaagtttatgatagcatgatact 32877976  T
Q  346 atagtggataatctcacacgaagtgtggggactggaagtagccgg 390  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  32877977 atagtggataatctcacacgtagtgtggggactggacgtagccgg 32878021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 172 - 390
Target Start/End: Original strand, 48978614 - 48978817
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  48978614 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 48978701  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||      || ||||||||||||||||||||||||| ||||    
T  48978702 acagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctga----tggatactatagtggataatctcacacgtagtg 48978797  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  48978798 tggggactggacgtagccgg 48978817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 172 - 390
Target Start/End: Original strand, 48988154 - 48988357
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataat 271  Q
    ||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || ||| |||||||||||| ||||||||||||    
T  48988154 tagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcgtagaagcctgctgaggttgataat 48988241  T
Q  272 acaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtg 370  Q
    |||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||      || ||||||||||||||||||||||||| ||||    
T  48988242 acagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctga----tggatactatagtggataatctcacacgtagtg 48988337  T
Q  371 tggggactggaagtagccgg 390  Q
    ||||||||||| ||||||||    
T  48988338 tggggactggacgtagccgg 48988357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 5385455 - 5385563
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| ||||||||||||  || ||||||||||||||||| ||  |||||| ||||||||||||||||    |||||||||||||||||||    
T  5385455 ttgagaacatatttctgagtttgtattcatacaaggatagtttgtttgacacataaagatccaaacaacatcctacacatcttttgtttgagacgctaga 5385554  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  5385555 tccaaacaa 5385563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 19388864 - 19388936
Alignment:
Q  337 ctgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataa 408  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  19388864 ctgaatactatagtcgataatctcacacgaagtgtggggacttgaagtagccgattttggtgaaccaggataa 19388936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 4361720 - 4361634
Alignment:
Q  218 caacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatac-aggggttacagactgatctggtgtgatcaa 303  Q
    |||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||| ||| || ||||| ||||||| |||||||||    
T  4361720 caacctttcttgtgcgaaagtaaagaattgaagaagtctgctgaggttgataatacaaggtgtaacagaatgatctgttgtgatcaa 4361634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 46305980 - 46305887
Alignment:
Q  58 tgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaa 151  Q
    ||||||||||||  || || |||||||||||||| |   |||||| |||||||||||||||||   ||||||||||||||||||||||||||||    
T  46305980 tgagtttgtattcatacaatgatagtttgtttgacatataaagatccaaacaacatcctacaaatcttttgtttgagacgctagatccaaacaa 46305887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 24285487 - 24285537
Alignment:
Q  337 ctgaatactatagtggataatctcacacgaagtgtggggactggaagtagc 387  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  24285487 ctgaatactatagtggataatctcacacgaagtgtagggagtggaagtagc 24285537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 557
Target Start/End: Original strand, 23487370 - 23487417
Alignment:
Q  510 atattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  23487370 atattctggtcctaattaatcacaaccaaattaatccagagttctctg 23487417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 496 - 557
Target Start/End: Original strand, 4951837 - 4951898
Alignment:
Q  496 tatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    |||| ||||||| |||||||||||||||||||||||  | |||||||||| ||||| |||||    
T  4951837 tattaatctccaaaatattctggtcctaattaatcattatcaaattaatcgagagtgctctg 4951898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 17535041 - 17535004
Alignment:
Q  172 tagatatcaagtctattgggcttaatagtttgagatag 209  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  17535041 tagatctcaagtctattgggcttaatagtttgagatag 17535004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 450
Target Start/End: Original strand, 23487323 - 23487364
Alignment:
Q  409 ctctcatgtgttattcttctttctctgtccctctctctatct 450  Q
    ||||| |||||||||||||||||||| |||||||||||||||    
T  23487323 ctctcctgtgttattcttctttctctctccctctctctatct 23487364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 429
Target Start/End: Complemental strand, 7784066 - 7783983
Alignment:
Q  347 tagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctt 429  Q
    ||||||||||||||||| |  ||||||| ||||||||||| | |||||||| |||||| | |  |||| |||||||||||||||    
T  7784066 tagtggataatctcacatgtggtgtgggaactggaagtagtcaggtttggtgaaccagaacagttctcctgtgttattcttctt 7783983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 562
Target Start/End: Complemental strand, 46305372 - 46305313
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||| ||||||||||||||||||| | | || ||||||| ||||||||||| ||||    
T  46305372 ctccagaacattctggtcctaattaatctcaatcatattaatccagagttctctggtcct 46305313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 32877801 - 32877848
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgaga 206  Q
    |||||||||||| |||||| |||||||||||| || |||||||||||||    
T  32877801 tacaaagtgtaa-ctagatctcaagtctattgagcataatagtttgaga 32877848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 235; Significance: 1e-130; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 233 - 562
Target Start/End: Original strand, 124043 - 124373
Alignment:
Q  233 gaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttcta 332  Q
    ||||| ||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  124043 gaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttcta 124142  T
Q  333 ccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttc 431  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||| | |||||||||||||||| |||||||||||||||||    
T  124143 ccaactgcatactatagtggataatctcacacgaagtgtggggactggaagtaacaggatttgatgaaccaggataactctcctgtgttattcttctttc 124242  T
Q  432 tctgtccctctctctatcttttatttttacacgatatgcacacactatcacacacattaatatttatttatctccagaatattctggtcctaattaatca 531  Q
    |||  | |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  124243 tctccctctctctctatcttttatttttacacgatattcacacactatcacaagcattaatatttatttatctccagaatgttctggtcctaattaatca 124342  T
Q  532 cgaccaaattaatcaagagttctctgctcct 562  Q
    | |||||||||||  ||||||||||| ||||    
T  124343 caaccaaattaatacagagttctctggtcct 124373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 83 - 306
Target Start/End: Original strand, 143016 - 143238
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  || |||||||||||||  | |||||||||||||| ||||||||| |  |||||||| |||||    
T  143016 tttgtttgagacgcta-gatccaaacaacatctttct-taattttgtttgagacattcgatccaaacaatcaccttacaaagagataactagatctcaag 143113  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  143114 tctattgggcttaatagtttgagataggaagagttccaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggtta 143213  T
Q  282 cagactgatctggtgtgatcaagac 306  Q
    | |||||||||||||||||||||||    
T  143214 cggactgatctggtgtgatcaagac 143238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 390
Target Start/End: Original strand, 99914 - 100134
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctg 257  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||         ||| ||||||||| ||   | || |||  ||||||| ||    
T  99914 tacaaagtgtaa-ctagatctcaagtctattgggcttaatagtttgagatag---------aacttttcttgtgtga---tcaagaatcatagaagcttg 100000  T
Q  258 cggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataa 356  Q
      |||||||||||||||| | || |||||||||| |||||||||||| |  |||||||| |  | ||||||||||   | | | |||||||| |||||||    
T  100001 ttgaggttgataatacagagtgtaacagactgatttggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactataatggataa 100100  T
Q  357 tctcacacgaagtgtggggactggaagtagccgg 390  Q
    ||||||||| |||||||||||||||  |||||||    
T  100101 tctcacacgtagtgtggggactggacatagccgg 100134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 142934 - 143042
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctaca-atatttttgtttgagacgctag 141  Q
    |||| ||||| ||| ||||||||||||  || ||||||||||||||| | |   |||| | |||||||||||||||| ||||||| ||||||||||||||    
T  142934 ttgagaacatatttctgagtttgtattcatacaaggatagtttgtttaacatataaagttccaaacaacatcctacacatatttt-gtttgagacgctag 143032  T
Q  142 atccaaacaa 151  Q
    ||||||||||    
T  143033 atccaaacaa 143042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 180837 - 180887
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagatag 209  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  180837 tacaaagtgtaa-ctagatctcaagtctattgggcttaatagtttgagatag 180887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 124 - 434
Target Start/End: Complemental strand, 14272320 - 14272008
Alignment:
Q  124 ttttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttccaac 221  Q
    |||| ||||||||  | ||||||||||| ||| ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  14272320 ttttttttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaagagttccaac 14272221  T
Q  222 ctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggtt 321  Q
     |||| |||||||||| ||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||    
T  14272220 atttcctgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgtttgtt 14272121  T
Q  322 agaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgtt 420  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  14272120 agaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtt 14272021  T
Q  421 attcttctttctct 434  Q
    |||| |||||||||    
T  14272020 attc-tctttctct 14272008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 124 - 419
Target Start/End: Complemental strand, 14282186 - 14281888
Alignment:
Q  124 ttttgtttgagacgctagatccaaacaa-tcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaa-agttccaac 221  Q
    |||| ||||||||  | ||||||||||| ||| ||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  14282186 ttttttttgagacattcgatccaaacaaatcaccttacaaagagataactagatctcaagtctattgggcttaatagtttgagataggaagagttccaac 14282087  T
Q  222 ctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggtt 321  Q
     |||| |||||||||| ||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||    
T  14282086 atttcctgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgtttgtt 14281987  T
Q  322 agaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgt 419  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  14281986 agaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 14281888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 83 - 411
Target Start/End: Complemental strand, 3471277 - 3470949
Alignment:
Q  83 tttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaacaatcatcttacaaagtgtaaactagatatcaag 182  Q
    |||||||||||||| | ||| ||||||||||| | |  ||||||||||||||||  |||||||||||||||| ||||||||| |  |||||||| |||||    
T  3471277 tttgtttgagacgcta-gatccaaacaacatctttct-tatttttgtttgagacattagatccaaacaatcaccttacaaagagataactagatctcaag 3471180  T
Q  183 tctattgggcttaatagtttgagataggaa-agttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggggtta 281  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  3471179 tctattgggtttaatagtttgagataggaagagttctaacctttcttgtgcgaaagcaaagaattgtagaagcctgctgaggttgataatacagtggtta 3471080  T
Q  282 cagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactgga 381  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||| |||||||||||||||| ||||||||||| |||||    
T  3471079 cggactgatctggtgtgatcaagaccttataatgttggttagaagtttctaccaattgtatactacagtggataatctcacatgaagtgtgggggctgga 3470980  T
Q  382 agtagccgggtttggt-aaccaggataactc 411  Q
    |||| ||||||||||| ||||||||||||||    
T  3470979 agtaaccgggtttggtgaaccaggataactc 3470949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 149 - 562
Target Start/End: Original strand, 21633493 - 21633901
Alignment:
Q  149 caatcatcttacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgt 248  Q
    |||||||| |||||||||||| |||| | ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| ||||| ||  |||| |    
T  21633493 caatcatcatacaaagtgtaatctaggtctcaagtctattgggcataatagtttgagatagaaaagttccaacatttcttgtgtgaaagcaaggaatt-t 21633591  T
Q  249 agaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactata 348  Q
    |||||||||| ||||||||||||||||  ||| | |||||||||||||||| |||||||||||| || | || |||||||||||| |   ||||||||||    
T  21633592 agaagcctgctgaggttgataatacagttgttccggactgatctggtgtgaccaagaccttataatgctagtcagaagtttctactagtagaatactata 21633691  T
Q  349 gtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctcta 447  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||||| |||||| |||  | || ||||||||||||||       ||||| |||||     
T  21633692 gtggataatctcacaaaaagtgtggggactagacgtagccgggtttggtgaaccagaatatttatcttgtgttattcttct-------tccctttctct- 21633783  T
Q  448 tcttttattt---ttacacgatatgcacacactatcaca--cacattaatatttatttatctccagaatattctggtcctaattaatcacgaccaaatta 542  Q
      ||||||||   |||||| |||  ||||||||||||||  || ||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  21633784 --ttttatttaagttacacaatacacacacactatcacactcatattaatatttattaatctccagaatattctagtcctaattaatcacaaccaaatta 21633881  T
Q  543 atcaagagttctctgctcct 562  Q
    ||| ||||||||||| ||||    
T  21633882 atccagagttctctgatcct 21633901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 218 - 556
Target Start/End: Complemental strand, 5378632 - 5378296
Alignment:
Q  218 caacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgt 316  Q
    |||||||||||||||||||| ||| ||||||||||| |||| |||||| |||||| |||| || |||||||||||||||||||||||||||||||||||     
T  5378632 caacctttcttgtgcgaaagcaaagaattgtagaagtctgctgaggtttataatatagggtgtaacagactgatctggtgtgatcaagaccttatagtgc 5378533  T
Q  317 tggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactct 412  Q
    | ||||||||||||   || |||  ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  5378532 tagttagaagtttctgttagcaa--gacaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataattct 5378435  T
Q  413 catgtgttattcttctttctctgtccctctctctatcttttatttttacacgatatgcacacactatcaca--cacattaatatttatttatctccagaa 510  Q
    | ||||||||||||||       ||||| ||||| |  ||||    ||||  |||| ||||||||||||||  || ||||||||||||| ||||||||||    
T  5378434 cctgtgttattcttct-------tccctttctcttttatttaaagctacataatatacacacactatcacactcatattaatatttattaatctccagaa 5378342  T
Q  511 tattctggtcctaattaatcacgaccaaattaatcaagagttctct 556  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||    
T  5378341 tattctggtcttaattaatcacaaccaaattaatctagagttctct 5378296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 284 - 423
Target Start/End: Complemental strand, 21919571 - 21919431
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaag 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21919571 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaaaactatagtggataatctcacacgaagtgtggggactggaag 21919472  T
Q  384 tagccgggtttggt-aaccaggataactctcatgtgttatt 423  Q
    ||||||| || ||| || ||||||||||||| |||||||||    
T  21919471 tagccggattgggtgaatcaggataactctcctgtgttatt 21919431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 178 - 562
Target Start/End: Complemental strand, 26906490 - 26906112
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg 277  Q
    ||||||||||| | | ||||||||||||| || |  |||||||||||||||||| ||   | || ||||||| ||| |||| |||||||||||||||| |    
T  26906490 tcaagtctatttgtcataatagtttgagaaagaattgttccaacctttcttgtgtga---tcaagaattgtaaaagtctgctgaggttgataatacagag 26906394  T
Q  278 -gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
     || ||||||||||||||||||| ||||| ||||||||| | || ||||||||||   |||   ||| |||| ||||||||||||||||| || ||||||    
T  26906393 tgtaacagactgatctggtgtgaccaagaacttatagtgctagtcagaagtttctgttaacaagatattataatggataatctcacacgaggtatgggga 26906294  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatcttttattt---ttacacgatatgcac 472  Q
    || ||||||||| |||||||| ||||||||||| |||| ||||||||||||||       ||||| |||||   ||||||||   ||||||  ||| |||    
T  26906293 ctagaagtagcctggtttggtgaaccaggataaatctcgtgtgttattcttct-------tccctttctct---ttttatttaaattacac--tatacac 26906206  T
Q  473 acactatcaca--cacattaatatttatttatc--tccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||| ||||||  || ||||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  26906205 acacaatcacaatcatattaatatttattaatctttccagaatattctggtcctaattaatcacaaccaaattaatccagagttctctggtcct 26906112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 222 - 434
Target Start/End: Complemental strand, 40999239 - 40999024
Alignment:
Q  222 ctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggt 320  Q
    |||||||||| ||||| ||| ||||||||||| |||  ||||||||||||||| || || ||| ||||||||||||||||||| ||||||||||| | ||    
T  40999239 ctttcttgtgtgaaagcaaagaattgtagaagtctgttgaggttgataatacatggtgtaacaaactgatctggtgtgatcaaaaccttatagtgctagt 40999140  T
Q  321 tagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggt-aaccaggataactctcatg 416  Q
     | |||||||   || |||  ||  |||||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||||| |||    
T  40999139 cataagtttccgttagcaa--gacaactatagtggataatctcacacgaggtgtggggactggaagttgtcgggtttggtgaaccaggataactcttatg 40999042  T
Q  417 tgttattcttctttctct 434  Q
    |||||||| ||| |||||    
T  40999041 tgttattcctctctctct 40999024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 178 - 434
Target Start/End: Complemental strand, 15810230 - 15809965
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg 277  Q
    |||||| | ||| ||||||||||||||||||| ||| |||||||||||||| |||      ||| |||||||||||| ||| || ||||||||||||||     
T  15810230 tcaagtatgttgagcttaatagtttgagatagaaaa-ttccaacctttcttttgctggttcaaagaattgtagaagcatgccgaagttgataatacaggt 15810132  T
Q  278 gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtggg 374  Q
    || || |||||||||||||||||||||||||||||||| |  | |||||||||   ||||||  ||  | |||||||||||||||||||||| |||||||    
T  15810131 gtaacggactgatctggtgtgatcaagaccttatagtgctactcagaagtttctgttaccaa--gataattatagtggataatctcacacgaggtgtggg 15810034  T
Q  375 ga--------ctggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctct 434  Q
    ||        |||||||||| ||| |||||| ||||||||||| |||| ||||||||| |||| |||||    
T  15810033 gactcgaactctggaagtagtcggatttggtgaaccaggataattctcttgtgttattattctctctct 15809965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 215 - 386
Target Start/End: Original strand, 30676766 - 30676938
Alignment:
Q  215 ttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatag 313  Q
    ||||||||||||||||| ||||| ||| |||| || |||  ||  ||| |||||||||||| | || |||||||||||| |||||||||||| | |||||    
T  30676766 ttccaacctttcttgtgtgaaagcaaagaattatataagtatgttgagattgataatacagagtgtaacagactgatcttgtgtgatcaagaacatatag 30676865  T
Q  314 tgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtag 386  Q
    || |  | | ||||||||   | ||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  30676866 tgctattcataagtttcttatagctgaatattgtaatggataatctcacacgaagtgtggggactgaaagtag 30676938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 3471359 - 3471251
Alignment:
Q  43 ttgataacatctttttgagtttgtatttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctaga 142  Q
    |||| ||||| ||| |||||||||| |  || ||||||||||||||||| ||  |||||| |||||||||||| |||    |||||||||||||||||||    
T  3471359 ttgagaacatatttatgagtttgtactcatacaaggatagtttgtttgacacataaagatccaaacaacatcccacacatcttttgtttgagacgctaga 3471260  T
Q  143 tccaaacaa 151  Q
    |||||||||    
T  3471259 tccaaacaa 3471251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 562
Target Start/End: Complemental strand, 15809921 - 15809846
Alignment:
Q  487 attaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||| |  ||||||||  ||||||||||| ||||    
T  15809921 attaatatttattaatctccagaatattctggtaataattaatcactataaaattaatacagagttctctgatcct 15809846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 21919626 - 21919579
Alignment:
Q  163 agtgtaaactagatatcaagtctattgggcttaatagtttgagatagg 210  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||    
T  21919626 agtgtaaactagttctcaagtctattgggcttaatagtttgagatagg 21919579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 503 - 562
Target Start/End: Complemental strand, 14271944 - 14271885
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| ||||||||||| ||||    
T  14271944 ctccagaacattctggtcctaattaatctcaaccatattaatccagagttctctggtcct 14271885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 503 - 562
Target Start/End: Complemental strand, 14281811 - 14281752
Alignment:
Q  503 ctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| ||||||||||| ||||    
T  14281811 ctccagaacattctggtcctaattaatctcaaccatattaatccagagttctctggtcct 14281752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 14272413 - 14272331
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaaca 150  Q
    |||||| ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||||| |||||||||||    
T  14272413 tttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgccagatccaaaca 14272331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 14282279 - 14282197
Alignment:
Q  68 tttgtaaaaggatagtttgtttgagacgcaaagattcaaacaacatcctacaatatttttgtttgagacgctagatccaaaca 150  Q
    |||||| ||||||||||||||||| |   |||| | ||||||||||||||||    ||||||||||||||| |||||||||||    
T  14282279 tttgtacaaggatagtttgtttgacatataaagttccaaacaacatcctacacatcttttgtttgagacgccagatccaaaca 14282197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 496 - 557
Target Start/End: Complemental strand, 40998974 - 40998913
Alignment:
Q  496 tatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctg 557  Q
    |||| ||||| |||||||||| ||||||||||||||| | |||||||||| |||||| ||||    
T  40998974 tattaatctcaagaatattctagtcctaattaatcactatcaaattaatccagagttttctg 40998913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 21919734 - 21919674
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    ||||||| ||| |||||||| ||||||||| || |||||||||||||||  ||||||||||    
T  21919734 atatttaccatctttatctcttttatttgagaatatctttttgagtttgcctttgtaaaag 21919674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 153; Significance: 8e-81; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 178 - 420
Target Start/End: Original strand, 256899 - 257142
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgta-gaagcctgcggaggttgataatacagg 276  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| |  | ||| ||||||| ||||| ||| ||||||||||||||||     
T  256899 tcaagtctattgggctgaatagtttgagatagaaaa-ttccaacctttcttttgctagtgcaaagaattgtaagaagcttgctgaggttgataatacaga 256997  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtgggga 376  Q
    ||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  256998 ggttacgaactgatctggtgtgatcaagactttatagtgttggttagaagtttctaccaactgaatactatagtggataatttcacacgaagtgtgggga 257097  T
Q  377 ctggaagtagccgggtttggt-aaccaggataactctcatgtgtt 420  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||    
T  257098 ctggaagtagccggatttggtgaaccaggataactctcctgtgtt 257142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 562
Target Start/End: Original strand, 257244 - 257304
Alignment:
Q  502 tctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||||||| |||||||| |||||||||  |||| ||||||| ||||||||||| ||||    
T  257244 tctccagaataatctggtccaaattaatcataaccatattaatccagagttctctggtcct 257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 134; Significance: 2e-69; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 284 - 521
Target Start/End: Complemental strand, 2401 - 2162
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaag 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  2401 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgtatactatagtggataatctcacaagaagtgtggggactagaag 2302  T
Q  384 tagccgggtttggt-aaccaggataactctcatgtgttattct--tctttctctgtccctctctctatcttttatttttacacgatatgcacacactatc 480  Q
    ||||||| || ||| |||||||||||||||| |||||||||||  ||| ||||| || |||||||| ||| |||| || |||| |||| ||||||| |||    
T  2301 tagccggattgggtgaaccaggataactctcctgtgttattcttctctctctctctctctctctctctctcttatcttgacacaatattcacacacaatc 2202  T
Q  481 acacacattaatatttatttatctccagaatattctggtcc 521  Q
    |||||||||  |||||  |||||||||||| ||||||||||    
T  2201 acacacatt-ttatttgcttatctccagaacattctggtcc 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 2458 - 2409
Alignment:
Q  161 aaagtgtaaactagatatcaagtctattgggcttaatagtttgagatagg 210  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2458 aaagtgtaaactagatctcaagtctattgggcttaatagtttgagatagg 2409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 2564 - 2504
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||||||  ||||||||||    
T  2564 atatttatcatctttatctcttttatttgagaatatctttttgagtttgcctttgtaaaag 2504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 122; Significance: 3e-62; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 180 - 450
Target Start/End: Complemental strand, 31070 - 30796
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| |||||||||||||||||    
T  31070 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagg 30972  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     ||||| |||||||||||||||||||| |  || ||||||| || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  30971 tgttactgactgatctggtgtgatcaaaatattgtagtgttagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 30874  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctctatct 450  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| || || |||||||||    
T  30873 ggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctctctctctatctctatct 30796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 178 - 446
Target Start/End: Original strand, 9984 - 10252
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataatacaggg 277  Q
    |||||||||||  ||||||||||||||||||| ||| ||| ||| ||| || | | |  | ||| ||||||||||||||   |||||||||||||||||     
T  9984 tcaagtctattatgcttaatagtttgagatagaaaa-ttctaacatttatttttctagtgcaaagaattgtagaagcctattgaggttgataatacaggt 10082  T
Q  278 gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtggg 374  Q
    || ||||||||||||||||||||| ||||||||||||| | || |||||||||   || |||  ||  |||||||||||||||||||||||  |||||||    
T  10083 gtaacagactgatctggtgtgatctagaccttatagtgctagtcagaagtttctgttagcaa--gacaactatagtggataatctcacacggggtgtggg 10180  T
Q  375 gactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    |||||||| |||||| ||||||| ||||| |||||||||||||||||||||  || ||||| || ||||||||    
T  10181 gactggaa-tagccgtgtttggtgaaccaagataactctcatgtgttattcccctctctctctctctctctct 10252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 562
Target Start/End: Original strand, 23525 - 23600
Alignment:
Q  487 attaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||||||||| |||||||||||||||| || |||||||||||| | |||||||||| ||||||||||| ||||    
T  23525 attaatatttattaatctccagaatattctagtactaattaatcactatcaaattaatccagagttctctggtcct 23600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 487 - 562
Target Start/End: Original strand, 26702 - 26777
Alignment:
Q  487 attaatatttatttatctccagaatattctggtcctaattaatcacgaccaaattaatcaagagttctctgctcct 562  Q
    ||||||||||||| |||||||||||||||| ||  ||||||||||| | |||||||||| ||||||||||| ||||    
T  26702 attaatatttattaatctccagaatattctagtattaattaatcactatcaaattaatccagagttctctggtcct 26777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 111; Significance: 9e-56; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 180 - 446
Target Start/End: Complemental strand, 94678 - 94407
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  94678 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 94580  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  94579 ggttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 94482  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct-tctttctctgtccctctctct 446  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||| ||||| || ||||||||    
T  94481 ggactggaagtagccgggtttagtgaaccaggataactctcctgtgttattctctctctctctttctctctctct 94407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 180 - 425
Target Start/End: Complemental strand, 104119 - 103870
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  104119 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 104021  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  104020 ggttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 103923  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattct 425  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||||||||||    
T  103922 ggactggaattagccgggtttggtgaaccaggataactctcctgtgttattct 103870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 180 - 446
Target Start/End: Original strand, 408269 - 408539
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||  |||||||||||||||||    
T  408269 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgaagaggttgataatacagg 408367  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
     ||||| |||| |||||||||||||||||  || ||||| | || ||||||||||   | |||  ||| |||||||||||||||||||||||| ||||||    
T  408368 tgttacggactaatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtgg 408465  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||| || ||||||||    
T  408466 ggactggaagtagacgggtttggtgaaccaggataactctcctgtgttattcttctctctctctctctctctct 408539  T

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Target: scaffold0482 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 180 - 429
Target Start/End: Original strand, 3474 - 3727
Alignment:
Q  180 aagtctattgggcttaatagttt-gagataggaaagttccaacctttcttgtgcgaaagt--aaaaaattgtagaagcctgcggaggttgataatacagg 276  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||| |  ||  ||| ||||||| |||||||| ||||||||||||||||     
T  3474 aagtctattgggcttaatagttttgagatagaaaa-ttccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaga 3572  T
Q  277 ggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtgg 373  Q
    |||||||||||||||||||||||||||||  || ||||| | || |||||||||   || |||  ||  |||||||||||||||||||||||| ||||||    
T  3573 ggttacagactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gacaactatagtggataatctcacacgaggtgtgg 3670  T
Q  374 ggactggaagtagccgggtttggt-aaccaggataactctcatgtgttattcttctt 429  Q
    |||||||||||||||||||||||| |||||| |||| |||| |||||||||||||||    
T  3671 ggactggaagtagccgggtttggtgaaccagaataattctcctgtgttattcttctt 3727  T

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Target: scaffold0482; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 521
Target Start/End: Original strand, 3750 - 3814
Alignment:
Q  459 tacacgatatgcacacactatcaca--cacattaatatttatttatctccagaatattctggtcc 521  Q
    ||||| |||| ||||||||||||||  || || |||||||||| |||||||||| ||||||||||    
T  3750 tacacaatatacacacactatcacactcatatgaatatttattaatctccagaacattctggtcc 3814  T

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Target: scaffold0334 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 284 - 446
Target Start/End: Complemental strand, 12688 - 12525
Alignment:
Q  284 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatctcacacgaagtgtggggactggaag 383  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  12688 gactaatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactaaaaactatagtggataatctcacacgaagtgtagggactggaag 12589  T
Q  384 tagccgggtttggt-aaccaggataactctcatgtgttattcttctttctctgtccctctctct 446  Q
    ||||||| || ||| |||||||||||||||| | |||||||  ||| ||||| || ||||||||    
T  12588 tagccggattgggtgaaccaggataactctcctatgttatttctctctctctctctctctctct 12525  T

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Target: scaffold0334; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 12756 - 12696
Alignment:
Q  151 atcatcttacaa-agtgtaaactagatatcaagtctattgggcttaatagtttgagatagg 210  Q
    |||||| ||||| |||||||||||| | ||||||||||||||| |||||||||||||||||    
T  12756 atcatcatacaagagtgtaaactagttctcaagtctattgggcgtaatagtttgagatagg 12696  T

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Target: scaffold0334; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 12851 - 12791
Alignment:
Q  17 atatttatcatttttatctcatttatttgataacatctttttgagtttgtatttgtaaaag 77  Q
    ||||||| ||| |||||||| ||||||||| || |||||||||||||||  ||||||||||    
T  12851 atatttaccatctttatctcttttatttgagaatatctttttgagtttgcctttgtaaaag 12791  T

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Target: scaffold0269 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 247 - 390
Target Start/End: Complemental strand, 14992 - 14848
Alignment:
Q  247 gtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatact 345  Q
    |||||||||||| |||||||||||||||| | || ||||||||||||||||||||||| |  |||||||| |  | ||||||||||   | | | |||||    
T  14992 gtagaagcctgctgaggttgataatacagagtgtaacagactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatact 14893  T
Q  346 atagtggataatctcacacgaagtgtggggactggaagtagccgg 390  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  14892 atagtggataatctcacacgtagtgtggggactggacgtagccgg 14848  T

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Target: scaffold0223 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 214 - 389
Target Start/End: Complemental strand, 27269 - 27088
Alignment:
Q  214 gttccaacctttcttgtgcgaaagtaaaaaattgt-agaagcctgcggaggttgataatacag-gggttacagactgatctggtgtgatcaagaccttat 311  Q
    |||||||||||||||||||||||| ||| |||||| | |||||||| |||||||||||||||| | || ||  | |||||| |||||||||||| | |||    
T  27269 gttccaacctttcttgtgcgaaagcaaagaattgtaataagcctgctgaggttgataatacagagtgtaacgaattgatctagtgtgatcaagaacatat 27170  T
Q  312 agtgttggttagaagtttctaccaactgaatactatag----tggataatctcacacgaagtgtggggactggaagtagccg 389  Q
    ||||||  | ||||||||||   |  || |||||||||    |||||||||||||||||||| |||||||||||||||||||    
T  27169 agtgttattaagaagtttctgatagttggatactatagtggatggataatctcacacgaagtatggggactggaagtagccg 27088  T

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Target: scaffold0247 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 247 - 387
Target Start/End: Original strand, 24600 - 24741
Alignment:
Q  247 gtagaagcctgcggaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatact 345  Q
    |||||||||||| |||||||||||||||| | || || |||||||||||||||||||| |  |||||||| |  | ||||||||||   | | | |||||    
T  24600 gtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatact 24699  T
Q  346 atagtggataatctcacacgaagtgtggggactggaagtagc 387  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  24700 atagtggataatctcacacgtagtgtggggactggacgtagc 24741  T

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Target: scaffold0247; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 24524 - 24574
Alignment:
Q  158 tacaaagtgtaaactagatatcaagtctattgggcttaatagtttgagatag 209  Q
    |||||||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  24524 tacaaagtgtaa-ctagatctcaagtctattgggtttaatagtttgatatag 24574  T

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Target: scaffold0233 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 26368 - 26320
Alignment:
Q  180 aagtctattgggcttaatag-tttgagataggaaagttccaacctttctt 228  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  26368 aagtctattgggcttaatagttttgagata-gaaaattccaacctttctt 26320  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 42214 - 42118
Alignment:
Q  178 tcaagtctattgggcttaatagtttgagataggaaagttccaacctttcttgtgcgaaagtaaaaaattgtagaagcctgcggaggttgataataca 274  Q
    ||||||||||| | |  |||||||||||| || |  |||| ||||||||||||||||||| ||  || | ||||||| | | |||||||||||||||    
T  42214 tcaagtctatttgtcggaatagtttgagaaagaattgttcaaacctttcttgtgcgaaagcaaggaaatttagaagcttactgaggttgataataca 42118  T

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