View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10978_high_7 (Length: 237)
Name: NF10978_high_7
Description: NF10978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10978_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 3684672 - 3684511
Alignment:
| Q |
58 |
tcctaccacactcctagtgcccaaaatcaaaggaagaatggatcaagcatactccaccagagcgaagagacacaagtgataagcaagcagactcgaacaa |
157 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || |
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| T |
3684672 |
tcctaccacactcctattgcccaaaatcaaaggaagaatggatcaagcatactccaccagagcgaagagacacaagtgataaggaagcaggttcgaaaaa |
3684573 |
T |
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| Q |
158 |
ccccacttaaagacacccaaacaagcaccccacatagtgagactaccaactccagcagagaa |
219 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |
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| T |
3684572 |
ccccacttaaagacacccaaacaagcaccccacacagtgagactaccgactccagcagagaa |
3684511 |
T |
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