View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10978_high_8 (Length: 223)

Name: NF10978_high_8
Description: NF10978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10978_high_8
NF10978_high_8
[»] chr6 (28 HSPs)
chr6 (1-207)||(33260530-33260736)
chr6 (56-207)||(33282826-33282977)
chr6 (56-207)||(33386287-33386433)
chr6 (60-197)||(33416873-33417010)
chr6 (54-176)||(33281627-33281749)
chr6 (54-187)||(33397353-33397486)
chr6 (1-57)||(24356259-24356315)
chr6 (54-186)||(33408265-33408397)
chr6 (1-57)||(17193138-17193194)
chr6 (1-57)||(23777276-23777332)
chr6 (1-57)||(1751636-1751692)
chr6 (1-57)||(9838327-9838383)
chr6 (1-57)||(23923918-23923974)
chr6 (1-57)||(3849045-3849101)
chr6 (1-57)||(11676817-11676872)
chr6 (1-57)||(17835873-17835929)
chr6 (1-57)||(19645877-19645933)
chr6 (1-57)||(24635688-24635744)
chr6 (1-57)||(26470928-26470984)
chr6 (9-57)||(31244962-31245010)
chr6 (1-58)||(17251461-17251518)
chr6 (5-58)||(30388700-30388753)
chr6 (1-57)||(373703-373759)
chr6 (1-57)||(8176416-8176472)
chr6 (1-57)||(22050029-22050085)
chr6 (1-57)||(22400769-22400825)
chr6 (1-57)||(24948223-24948279)
chr6 (1-57)||(27313480-27313536)
[»] scaffold0428 (3 HSPs)
scaffold0428 (56-207)||(11275-11426)
scaffold0428 (76-207)||(4586-4717)
scaffold0428 (54-176)||(12503-12625)
[»] chr2 (26 HSPs)
chr2 (72-207)||(17442767-17442902)
chr2 (1-58)||(32854987-32855044)
chr2 (1-57)||(19594331-19594387)
chr2 (1-58)||(34884745-34884802)
chr2 (1-57)||(13849922-13849978)
chr2 (1-57)||(14295964-14296020)
chr2 (1-57)||(26342560-26342616)
chr2 (1-57)||(32674191-32674247)
chr2 (1-57)||(34399182-34399238)
chr2 (1-57)||(41885605-41885661)
chr2 (1-52)||(37093435-37093486)
chr2 (1-50)||(2012848-2012897)
chr2 (1-57)||(4952895-4952950)
chr2 (1-57)||(9369954-9370010)
chr2 (1-57)||(10812179-10812235)
chr2 (1-57)||(14288411-14288467)
chr2 (1-57)||(15183208-15183264)
chr2 (1-57)||(31025147-31025203)
chr2 (1-57)||(35158558-35158614)
chr2 (1-57)||(43077272-43077328)
chr2 (12-57)||(29041932-29041977)
chr2 (1-58)||(34357157-34357214)
chr2 (1-57)||(11222523-11222579)
chr2 (1-57)||(11560254-11560310)
chr2 (1-57)||(28145779-28145835)
chr2 (9-57)||(33947644-33947692)
[»] chr3 (24 HSPs)
chr3 (1-57)||(47104365-47104421)
chr3 (1-57)||(53745491-53745547)
chr3 (1-57)||(20848929-20848985)
chr3 (1-57)||(33874756-33874812)
chr3 (1-57)||(41351405-41351461)
chr3 (6-57)||(51064863-51064914)
chr3 (1-58)||(7328434-7328491)
chr3 (1-58)||(19550225-19550282)
chr3 (1-57)||(13167996-13168052)
chr3 (1-57)||(17102734-17102790)
chr3 (1-57)||(41425609-41425665)
chr3 (1-57)||(43554370-43554426)
chr3 (1-57)||(52663422-52663478)
chr3 (11-57)||(32853543-32853589)
chr3 (1-50)||(11473389-11473438)
chr3 (1-58)||(20105171-20105228)
chr3 (1-57)||(790530-790586)
chr3 (9-57)||(35077367-35077415)
chr3 (1-57)||(36234347-36234403)
chr3 (1-57)||(40319138-40319194)
chr3 (1-57)||(45513825-45513881)
chr3 (1-57)||(47070067-47070123)
chr3 (1-57)||(52627448-52627504)
chr3 (1-57)||(54898296-54898352)
[»] chr7 (22 HSPs)
chr7 (1-57)||(42842073-42842129)
chr7 (1-58)||(47408117-47408174)
chr7 (1-58)||(33100040-33100097)
chr7 (1-57)||(1553495-1553551)
chr7 (1-57)||(8264927-8264983)
chr7 (1-57)||(18470287-18470343)
chr7 (1-57)||(31430539-31430595)
chr7 (1-57)||(32966256-32966312)
chr7 (1-56)||(30866943-30866998)
chr7 (9-57)||(3177910-3177958)
chr7 (1-57)||(13431338-13431394)
chr7 (1-57)||(17896730-17896786)
chr7 (1-57)||(20035028-20035084)
chr7 (1-57)||(20045439-20045495)
chr7 (1-57)||(43874289-43874345)
chr7 (1-57)||(12838285-12838341)
chr7 (22-58)||(14771014-14771050)
chr7 (22-58)||(15221466-15221502)
chr7 (1-57)||(18194421-18194477)
chr7 (1-57)||(35746851-35746907)
chr7 (1-57)||(46286052-46286108)
chr7 (9-57)||(46563338-46563386)
[»] chr5 (36 HSPs)
chr5 (1-57)||(5144199-5144255)
chr5 (1-57)||(38702103-38702159)
chr5 (1-58)||(26854295-26854352)
chr5 (1-57)||(4175681-4175737)
chr5 (1-57)||(5843194-5843250)
chr5 (1-57)||(7579869-7579925)
chr5 (1-57)||(21606459-21606515)
chr5 (1-57)||(42394329-42394385)
chr5 (1-55)||(10889295-10889349)
chr5 (8-57)||(1795325-1795374)
chr5 (1-57)||(6007845-6007901)
chr5 (1-57)||(8825019-8825075)
chr5 (1-57)||(18465663-18465719)
chr5 (1-57)||(18794745-18794801)
chr5 (1-57)||(19831741-19831797)
chr5 (1-57)||(25343922-25343978)
chr5 (1-57)||(28447185-28447241)
chr5 (9-57)||(28463594-28463642)
chr5 (1-52)||(14793991-14794042)
chr5 (1-52)||(25027925-25027976)
chr5 (1-51)||(13703063-13703113)
chr5 (1-57)||(7403816-7403870)
chr5 (1-58)||(30368316-30368373)
chr5 (12-57)||(38297829-38297874)
chr5 (9-57)||(425091-425139)
chr5 (1-57)||(1297939-1297995)
chr5 (1-57)||(3686356-3686411)
chr5 (1-57)||(9959078-9959134)
chr5 (1-57)||(12664820-12664876)
chr5 (1-57)||(12723160-12723216)
chr5 (1-57)||(12784643-12784699)
chr5 (9-57)||(13957369-13957417)
chr5 (1-57)||(32440113-32440169)
chr5 (1-57)||(38363153-38363209)
chr5 (1-57)||(38503001-38503057)
chr5 (1-57)||(38910236-38910292)
[»] chr4 (53 HSPs)
chr4 (1-57)||(34361039-34361095)
chr4 (1-57)||(42133020-42133076)
chr4 (1-57)||(43887966-43888022)
chr4 (1-57)||(52677350-52677406)
chr4 (7-58)||(36292607-36292658)
chr4 (1-51)||(53691859-53691909)
chr4 (1-57)||(9834247-9834303)
chr4 (1-57)||(13629398-13629454)
chr4 (1-57)||(30939138-30939194)
chr4 (1-57)||(36408706-36408762)
chr4 (1-57)||(36422872-36422928)
chr4 (1-57)||(37502004-37502060)
chr4 (1-57)||(38617512-38617568)
chr4 (1-60)||(12252080-12252139)
chr4 (1-52)||(23719989-23720040)
chr4 (1-58)||(31862191-31862248)
chr4 (1-58)||(39671307-39671364)
chr4 (1-58)||(46871903-46871960)
chr4 (1-57)||(3436272-3436328)
chr4 (1-57)||(4201523-4201579)
chr4 (1-61)||(16464987-16465047)
chr4 (1-57)||(16664224-16664280)
chr4 (1-57)||(19527413-19527469)
chr4 (1-57)||(21044952-21045008)
chr4 (1-57)||(33809070-33809126)
chr4 (9-57)||(34603607-34603655)
chr4 (1-57)||(37394364-37394420)
chr4 (9-57)||(37551878-37551926)
chr4 (1-57)||(44217689-44217745)
chr4 (1-57)||(47751520-47751576)
chr4 (1-57)||(48782183-48782239)
chr4 (1-57)||(53599991-53600047)
chr4 (1-57)||(56576308-56576364)
chr4 (1-51)||(23237399-23237449)
chr4 (1-55)||(27492344-27492398)
chr4 (1-51)||(31984306-31984356)
chr4 (8-57)||(5374562-5374611)
chr4 (1-58)||(19093358-19093415)
chr4 (1-58)||(22828606-22828663)
chr4 (1-54)||(23623700-23623753)
chr4 (1-58)||(29295336-29295393)
chr4 (1-50)||(38617806-38617855)
chr4 (9-57)||(3802143-3802191)
chr4 (9-57)||(18091225-18091273)
chr4 (18-58)||(19740761-19740801)
chr4 (1-57)||(32239383-32239439)
chr4 (12-60)||(33755298-33755346)
chr4 (1-57)||(36750160-36750216)
chr4 (1-57)||(42099691-42099747)
chr4 (1-57)||(44069014-44069070)
chr4 (1-57)||(47093795-47093851)
chr4 (1-57)||(47428512-47428568)
chr4 (1-57)||(55935090-55935146)
[»] chr8 (28 HSPs)
chr8 (1-60)||(39303720-39303779)
chr8 (1-58)||(8731031-8731088)
chr8 (1-57)||(17718483-17718539)
chr8 (1-57)||(34046831-34046887)
chr8 (1-55)||(6750597-6750651)
chr8 (1-55)||(6757388-6757442)
chr8 (1-58)||(2335412-2335469)
chr8 (1-57)||(3720660-3720716)
chr8 (1-57)||(14263524-14263580)
chr8 (1-57)||(23429889-23429945)
chr8 (1-57)||(43553447-43553503)
chr8 (2-57)||(7483724-7483779)
chr8 (1-58)||(2888672-2888729)
chr8 (1-54)||(18842513-18842566)
chr8 (1-57)||(25703781-25703837)
chr8 (1-57)||(25812952-25813008)
chr8 (1-57)||(26062688-26062744)
chr8 (1-57)||(40521448-40521503)
chr8 (1-54)||(16701097-16701150)
chr8 (1-58)||(38221792-38221848)
chr8 (1-57)||(13173909-13173965)
chr8 (1-57)||(15596324-15596380)
chr8 (1-57)||(21651950-21652006)
chr8 (1-57)||(23848760-23848816)
chr8 (1-57)||(27518911-27518967)
chr8 (1-57)||(32010307-32010362)
chr8 (5-57)||(34981809-34981861)
chr8 (9-57)||(45317632-45317680)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-55)||(147333-147387)
[»] chr1 (33 HSPs)
chr1 (1-57)||(1677196-1677252)
chr1 (1-57)||(32168513-32168569)
chr1 (1-57)||(51613391-51613447)
chr1 (1-57)||(8464650-8464706)
chr1 (1-57)||(9361953-9362009)
chr1 (1-57)||(31588940-31588996)
chr1 (1-52)||(45226778-45226829)
chr1 (1-57)||(1429264-1429320)
chr1 (1-57)||(13507750-13507806)
chr1 (1-57)||(13514938-13514994)
chr1 (1-57)||(15660567-15660623)
chr1 (1-57)||(18034027-18034083)
chr1 (1-57)||(19929667-19929723)
chr1 (1-57)||(21927897-21927953)
chr1 (1-57)||(30686391-30686447)
chr1 (1-57)||(31570838-31570894)
chr1 (1-57)||(35531496-35531552)
chr1 (1-57)||(36318333-36318389)
chr1 (1-45)||(43808890-43808934)
chr1 (9-52)||(48174881-48174924)
chr1 (2-57)||(52748997-52749052)
chr1 (3-57)||(1428199-1428253)
chr1 (1-54)||(19093251-19093304)
chr1 (1-49)||(1038071-1038119)
chr1 (1-57)||(1039568-1039624)
chr1 (1-49)||(1044977-1045025)
chr1 (1-57)||(1046474-1046530)
chr1 (1-57)||(10675882-10675938)
chr1 (1-57)||(37296926-37296982)
chr1 (1-57)||(37609502-37609558)
chr1 (1-57)||(48265237-48265293)
chr1 (1-57)||(49908383-49908439)
chr1 (9-57)||(52759008-52759056)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-57)||(184332-184388)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-44)||(7417-7460)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-57)||(49127-49183)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-57)||(195943-195999)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-57)||(138936-138992)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-52)||(419840-419890)
[»] scaffold0325 (1 HSPs)
scaffold0325 (1-57)||(295-351)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-57)||(14926-14982)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-57)||(69080-69136)


Alignment Details
Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 33260736 - 33260530
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtaggtgacaacgatggagctgttccagagaacaatgagatcggtg 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  33260736 taaataggaacaaaaaatttctctaaaactgaccattataaaggaacagagggagtaggtgacaatgatggagctgttccagagaacaatgagatcagtg 33260637  T
Q  101 ctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaaggttatgcttaattcattttcaaatcctgcttgcttgattgaatcag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33260636 ctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaaggttatgcttaattcattttcaaatcctgcttgcttgattgaatcag 33260537  T
Q  201 tgatgtc 207  Q
    || ||||    
T  33260536 tgttgtc 33260530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 33282977 - 33282826
Alignment:
Q  56 taggtgacaacgatggagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaagg 155  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33282977 taggtgacaatgatagagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaatatagg 33282878  T
Q  156 ttatgcttaattcattttcaaatcctgcttgcttgattgaatcagtgatgtc 207  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  33282877 ttatgcttaatgcattttcaaatcctgcttgcttgattgaatcagtgttgtc 33282826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 33386433 - 33386287
Alignment:
Q  56 taggtgacaacgatggagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaagg 155  Q
    |||||||||| | ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  33386433 taggtgacaatgctggagctgttccagagaacaatgagatcgctgctagtttgactggacaaagcggtgatttgtcttctgagaaaatcttgaataaagg 33386334  T
Q  156 ttatgcttaattcattttcaaatcctgcttgcttgattgaatcagtgatgtc 207  Q
         || |||||||||| ||||| ||||||||||| ||||| |||| ||||    
T  33386333 -----ctcaattcatttttaaatcatgcttgcttgactgaattagtgttgtc 33386287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 60 - 197
Target Start/End: Complemental strand, 33417010 - 33416873
Alignment:
Q  60 tgacaacgatggagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaaggttat 159  Q
    |||||||| || |||||||||||||||||||||||| | ||||| |||||| ||||||| ||||||||| ||  | |||  || ||||||||||||||||    
T  33417010 tgacaacgttgcagctgttccagagaacaatgagattgatgctaatttgactggacaaaatggtgatttatcccccgaggaaagcttgaataaaggttat 33416911  T
Q  160 gcttaattcattttcaaatcctgcttgcttgattgaat 197  Q
    |||| |||| ||||||||| |||||| | |||||||||    
T  33416910 gcttcattccttttcaaattctgctttcctgattgaat 33416873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 33281749 - 33281627
Alignment:
Q  54 agtaggtgacaacgatggagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaa 153  Q
    ||||| |||||| | || |||||||||||| ||||||||||||| |||||||||||  |||||||||| |||||||||| ||||  ||| |  |||||||    
T  33281749 agtagatgacaatgttgaagctgttccagataacaatgagatcgatgctagtttgagtggacaaagtgatgatttgtctcctgaaggaagcgcgaataaa 33281650  T
Q  154 ggttatgcttaattcattttcaa 176  Q
    |||||||||| ||| ||||||||    
T  33281649 ggttatgctttattaattttcaa 33281627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 187
Target Start/End: Complemental strand, 33397486 - 33397353
Alignment:
Q  54 agtaggtgacaacgatggagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaa 153  Q
    ||||| |||||| | || || ||||| ||| ||||||||||| | |||||||||||  |||||||||| |||||||||| ||||| ||  | ||||||||    
T  33397486 agtagatgacaatgttgaagatgttctagataacaatgagattgatgctagtttgagtggacaaagtgatgatttgtctcctgagggaggcgtgaataaa 33397387  T
Q  154 ggttatgcttaattcattttcaaatcctgcttgc 187  Q
    |||||||||| ||| |||||||| || |||||||    
T  33397386 ggttatgctttattaattttcaagtcatgcttgc 33397353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24356259 - 24356315
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  24356259 taaataggaacaataaatttctctaaaagtgacaattaaaaaggaacggagggagta 24356315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 33408397 - 33408265
Alignment:
Q  54 agtaggtgacaacgatggagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaa 153  Q
    ||||| |||||| | || || ||||| ||| ||||||||||| | |||||||||| | ||||||||||||||||  ||| ||||| | | | ||||||||    
T  33408397 agtagatgacaatgttgaagatgttctagataacaatgagattgatgctagtttggccggacaaagtggtgattcatctcctgagggcagcatgaataaa 33408298  T
Q  154 ggttatgcttaattcattttcaaatcctgcttg 186  Q
    |||||||||  ||| |||||||| |||||||||    
T  33408297 ggttatgctctattaattttcaagtcctgcttg 33408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17193194 - 17193138
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  17193194 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 17193138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23777332 - 23777276
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  23777332 taaataggaacaaaaaatttctccaaaattgacacttaaaaaggaacggagggagta 23777276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1751636 - 1751692
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| ||||||||||||||||||    
T  1751636 taaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacggagggagta 1751692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9838327 - 9838383
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||| ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  9838327 taaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 9838383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23923918 - 23923974
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||| |||| |||| ||||| ||| ||||||||||||||||||    
T  23923918 taaataggaacaaaaaatctctccaaaagtgacacttaaaaaggaacggagggagta 23923974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3849101 - 3849045
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  3849101 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 3849045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11676817 - 11676872
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||| ||||| | |||| || ||||||||||||||||||    
T  11676817 taaataggaacaaaaaatttctttaaaagttacaa-taaaaaggaacggagggagta 11676872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17835929 - 17835873
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  17835929 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 17835873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19645877 - 19645933
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| |||||||| |||||||||    
T  19645877 taaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacagagggagta 19645933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24635744 - 24635688
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| ||||  |||| ||| ||||||||||||||||||    
T  24635744 taaatagaaacaaaaaatttctccaaaagggacacttaaaaaggaacggagggagta 24635688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26470928 - 26470984
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  ||||  |||| ||| ||||||||||||||||||    
T  26470928 taaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagta 26470984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 31244962 - 31245010
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||| ||||||||| ||| |||||||| |||||    
T  31244962 aacaaaaaatttctctaaaaatgacaattaaaaatgaacggagagagta 31245010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17251461 - 17251518
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||||||||  |||| ||| ||||| ||| |||||||||| ||||    
T  17251461 taaataggaacaaaaaatttcttcaaaagtgataattaaaaaagaacggagggtgtag 17251518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 30388753 - 30388700
Alignment:
Q  5 taggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||||||||| |||||  |||| ||||| ||| |||||||||||||||||||    
T  30388753 taggaacaaaaattttcttcaaaagtgacacttaaaaaggaacggagggagtag 30388700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 373759 - 373703
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||| |||| ||||| ||| ||| |||||||| |||||    
T  373759 taaatatgaacaaaaaatttctccaaaagtgacacttaaaaatgaacggagagagta 373703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8176472 - 8176416
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  ||||  |||| ||| ||||||||| ||||||||    
T  8176472 taaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacgaagggagta 8176416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22050085 - 22050029
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||| ||||| ||||  ||| |||| ||||||||||||||||||    
T  22050085 taaatagaaacaaaaaaattctccaaaagagacgattaaaaaggaacggagggagta 22050029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22400769 - 22400825
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||| ||||  |||| ||| ||||||||||||| ||||    
T  22400769 taaataagaacaaaaaatttctccaaaagagacacttaaaaaggaacggaggtagta 22400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24948279 - 24948223
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||||||||||||||| |||||  || || ||||||||| |||||    
T  24948279 taaatagaaacaaaaaatttctctaaaagtgacatataaaacggaacggagcgagta 24948223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27313536 - 27313480
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| ||||  |||| ||| |||  |||||||||||||    
T  27313536 taaataggaacaaaaaatttctccaaaagagacacttaaaaaaaaacggagggagta 27313480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 140; Significance: 2e-73; HSPs: 3)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 11275 - 11426
Alignment:
Q  56 taggtgacaacgatggagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaagg 155  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11275 taggtgacaatgatagagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaagg 11374  T
Q  156 ttatgcttaattcattttcaaatcctgcttgcttgattgaatcagtgatgtc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11375 ttatgcttaattcattttcaaatcctgcttgcttgattgaatcagtgttgtc 11426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 4717 - 4586
Alignment:
Q  76 gttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaaggttatgcttaattcattttca 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  4717 gttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaatataggttatgcttaatgcattttca 4618  T
Q  176 aatcctgcttgcttgattgaatcagtgatgtc 207  Q
    ||||||||||||||||||||||||||| ||||    
T  4617 aatcctgcttgcttgattgaatcagtgttgtc 4586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 12503 - 12625
Alignment:
Q  54 agtaggtgacaacgatggagctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaa 153  Q
    ||||| |||||| | || |||||||||||| ||||||||||||| |||||||||||  |||||||||| |||||||||| ||||  ||| |  |||||||    
T  12503 agtagatgacaatgttgaagctgttccagataacaatgagatcgatgctagtttgagtggacaaagtgatgatttgtctcctgaaggaagcgcgaataaa 12602  T
Q  154 ggttatgcttaattcattttcaa 176  Q
    |||||||||| ||| ||||||||    
T  12603 ggttatgctttattaattttcaa 12625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 207
Target Start/End: Original strand, 17442767 - 17442902
Alignment:
Q  72 agctgttccagagaacaatgagatcggtgctagtttgacaggacaaagtggtgatttgtcttctgagagaatcttgaataaaggttatgcttaattcatt 171  Q
    |||||||| |||||||||| |||| | |||||||||||  |||||||||| |||||||||| ||||||||| ||||||| || |||||||||||||||||    
T  17442767 agctgttctagagaacaataagattgatgctagtttgagtggacaaagtgatgatttgtctcctgagagaagcttgaattaaagttatgcttaattcatt 17442866  T
Q  172 ttcaaatcctgcttgcttgattgaatcagtgatgtc 207  Q
    ||| |||||||||| |||| ||||||||||| ||||    
T  17442867 ttccaatcctgctttcttgtttgaatcagtgttgtc 17442902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32854987 - 32855044
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  32854987 taaataggaacaaaaaatttctctaaaagtgacaattataaatgaacggagggagtag 32855044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19594387 - 19594331
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  19594387 taaataggaacaaaaaatttctcaaaaagtgacaattaaaaaggaacggagggagta 19594331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34884745 - 34884802
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||||| |||| |||||    
T  34884745 taaataggaacaaaaaatttctctaaaagtgacagttaaaaaggaacagaggtagtag 34884802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13849922 - 13849978
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| ||||||||||||||| ||||| ||||||||| |||| |||||||||||||    
T  13849922 taaataagaacaaaaaatttctttaaaagtgacaattaaaaagaaacggagggagta 13849978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14295964 - 14296020
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  14295964 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 14296020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26342616 - 26342560
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||| ||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  26342616 taaataggaaccaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 26342560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32674247 - 32674191
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||| ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  32674247 taaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 32674191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34399238 - 34399182
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||| |||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  34399238 taaataggaataaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 34399182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41885661 - 41885605
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| |||||  || ||||||||||||||||||    
T  41885661 taaataggaacaaaaaatttctccaaaagtgacacctaaaaaggaacggagggagta 41885605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37093486 - 37093435
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagg 52  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  37093486 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagg 37093435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2012897 - 2012848
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacgga 50  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||||||    
T  2012897 taaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacgga 2012848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4952895 - 4952950
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| ||||||||||||||||||||| ||||||||| ||| ||| ||||||||||    
T  4952895 taaataagaacaaaaaatttctctaaaaatgacaatta-aaaagaaaggagggagta 4952950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9370010 - 9369954
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||||||| |||| ||| |||||||||    
T  9370010 taaatagaaacaaaaaatttctccaaaaatgacaattaaaaagaaactgagggagta 9369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10812235 - 10812179
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  10812235 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 10812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14288467 - 14288411
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| |||| |||||||||||||    
T  14288467 taaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggagta 14288411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15183208 - 15183264
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| ||||||||| ||||||||    
T  15183208 taaatagaaacaaaaaatttctcaaaaagtgacacttaaaaaggaacgaagggagta 15183264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31025147 - 31025203
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||||||||||  ||| ||||| ||| ||||||||||||||||||    
T  31025147 taaatagaaacaaaaaatttctcccaaaatgacacttaaaaaggaacggagggagta 31025203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35158558 - 35158614
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| |||||||| |||||||||    
T  35158558 taaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacagagggagta 35158614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43077328 - 43077272
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||||||| |||||||  |||||||||    
T  43077328 taaataggaacaaaaaatttcttcaaaagtgacaattaaaaaggaatagagggagta 43077272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 29041977 - 29041932
Alignment:
Q  12 aaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||| ||||||| ||||||||| |||||||||||| |||||    
T  29041977 aaaaaatttatctaaaagtgacaattaaaaaggaacggagcgagta 29041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34357214 - 34357157
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||   |||||| |||| ||||| ||| |||||||||||||||||||    
T  34357214 taaataggaacaaattttttctccaaaagtgacacttaaaaaggaacggagggagtag 34357157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11222523 - 11222579
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||  ||||  |||| ||| ||||||||||||||||||    
T  11222523 taaatagaaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagta 11222579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11560254 - 11560310
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||| |||||| |||||||||| |||  ||| |||||||||||||    
T  11560254 taaatagaaacaaaaattttctccaaaactgacacttaagaagaaacggagggagta 11560310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28145779 - 28145835
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||| ||||| |||||| |||| ||||| ||| ||||||||||||| ||||    
T  28145779 taaataggaagaaaaattttctccaaaagtgacacttaaaaaggaacggaggaagta 28145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 33947644 - 33947692
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||| ||||| ||||| ||| ||||||||||||| ||||    
T  33947644 aacaaaaaatttctgtaaaagtgacagttataaaggaacggaggtagta 33947692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47104365 - 47104421
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  47104365 taaataggaacaaaaaatttctctaaaagtgacaattaaaaaggaacggagggagta 47104421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 53745491 - 53745547
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  53745491 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 53745547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20848929 - 20848985
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||   ||||||||||| ||||||||| ||||||||||||||||||    
T  20848929 taaataggaacaaattttttctctaaaagtgacaattataaaggaacggagggagta 20848985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33874756 - 33874812
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||||||||| |||||  || |||||||||| |||||||    
T  33874756 taaataggaacaaaaaatttctctaaaagtgacagataaaaaggaacggtgggagta 33874812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41351405 - 41351461
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||| ||||||||||||||    
T  41351405 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaagaacggagggagta 41351461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 51064914 - 51064863
Alignment:
Q  6 aggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||| ||||| |||| ||||||||| ||||||||||||||||||    
T  51064914 aggaacaaaaaaattctccaaaaatgacaattaaaaaggaacggagggagta 51064863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7328491 - 7328434
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||||||||| ||||  |||| ||| ||||||||||| |||||||    
T  7328491 taaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacggaaggagtag 7328434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19550282 - 19550225
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||||||||| |||| | ||| ||| ||||||||||| |||||||    
T  19550282 taaataggaacaaaaaatttctccaaaagtaacatttaaaaaggaacggatggagtag 19550225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13168052 - 13167996
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||| || ||||||||||| ||||| ||| ||||||||||||||||||    
T  13168052 taaataagaacaataattttctctaaaagtgacacttaaaaaggaacggagggagta 13167996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17102790 - 17102734
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| ||||  |||| ||| ||| ||||||||||||||    
T  17102790 taaataggaacaaaaaatttctccaaaagagacacttaaaaaagaacggagggagta 17102734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41425665 - 41425609
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||| ||||| ||||  |||| ||| ||||||||||||||||||    
T  41425665 taaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagta 41425609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43554426 - 43554370
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||||||||||| ||||||    
T  43554426 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggatggagta 43554370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 52663478 - 52663422
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||||||||| ||| ||| |||||||| |||||    
T  52663478 taaatagtaacaaaaaatttctccaaaactgacacttaaaaatgaacggagagagta 52663422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 32853543 - 32853589
Alignment:
Q  11 caaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||    
T  32853543 caaaaaatttctctaaaagtaacaattaaaaagaaacggagggagta 32853589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11473438 - 11473389
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacgga 50  Q
    |||| |||||||||||||||||| |||| ||||| ||| |||||||||||    
T  11473438 taaacaggaacaaaaaatttctccaaaagtgacatttaaaaaggaacgga 11473389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20105228 - 20105171
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||| ||||||||||| |||||| |||| ||||| ||| ||||||||||||| |||||    
T  20105228 taaagaggaacaaaaattttctccaaaagtgacacttaaaaaggaacggaggtagtag 20105171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 790586 - 790530
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||| ||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  790586 taaatagaaacataaattttctccaaaagtgacacttaaaaaggaacggagggagta 790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 35077415 - 35077367
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||| |||| ||||| ||||| ||| ||||||||||||||||||    
T  35077415 aacaaaaaaattctgtaaaagtgacagttataaaggaacggagggagta 35077367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36234403 - 36234347
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||| |||||  | || ||||| ||||||||||||||||||||||    
T  36234403 taaatagaaacaaaaattttcttcataagtgacacttacaaaggaacggagggagta 36234347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40319138 - 40319194
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||| ||||| ||||  |||| ||| ||||||||||| ||||||    
T  40319138 taaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacggatggagta 40319194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 45513825 - 45513881
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| | ||| ||| ||| ||||||||| ||||    
T  45513825 taaataggaacaaaaaatttctccaaaagtaacacttaaaaaagaacggaggaagta 45513881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47070067 - 47070123
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||   ||| ||||| ||| ||||||| ||||||||||    
T  47070067 taaataggaacaaaaaatttctacgaaagtgacacttaaaaaggaatggagggagta 47070123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52627448 - 52627504
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||| ||||| |||| ||||| ||| ||||||||||| ||||||    
T  52627448 taaatagaaacaaaaaacttctccaaaagtgacacttaaaaaggaacggaaggagta 52627504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 54898296 - 54898352
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| |||||||| |||||||||    
T  54898296 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacagagggagta 54898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42842073 - 42842129
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  42842073 taaataggaacaaaaaatttctctaaaagtgacaattaaaaaggaacggatggagta 42842129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47408174 - 47408117
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  47408174 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtag 47408117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33100040 - 33100097
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||| |||||||||||||||    
T  33100040 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaagaacggagggagtag 33100097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1553551 - 1553495
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| ||||  ||| |||| ||||||||||||||||||    
T  1553551 taaataggaacaaaaaatttctccaaaagagacgattaaaaaggaacggagggagta 1553495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8264983 - 8264927
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| ||||||||||| ||||| ||| ||||||||||| ||||||    
T  8264983 taaataggaacaaaaattttctctaaaagtgacacttaaaaaggaacggaaggagta 8264927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18470343 - 18470287
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  18470343 taaataagaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 18470287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31430595 - 31430539
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| ||||||||||||||||||    
T  31430595 taaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacggagggagta 31430539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32966256 - 32966312
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||| |||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  32966256 taaataggaataaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 32966312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30866943 - 30866998
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagt 56  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||| |||||||||||||    
T  30866943 taaataggaacaaaaaatttctccaaaaatgacacttaaaaaagaacggagggagt 30866998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 3177958 - 3177910
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||| |||| ||||| ||||||||| ||||||||||||||||||    
T  3177958 aacaaaaaaattctgtaaaagtgacaattaaaaaggaacggagggagta 3177910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13431338 - 13431394
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||   ||||||||||| ||||||||| ||| ||||||||||||||    
T  13431338 taaataggaacaaattttttctctaaaagtgacaattaaaaaagaacggagggagta 13431394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17896730 - 17896786
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  17896730 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 17896786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20035084 - 20035028
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| ||||||||||| ||||||    
T  20035084 taaataggaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggatggagta 20035028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20045495 - 20045439
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| ||||||||||| ||||||    
T  20045495 taaataggaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggatggagta 20045439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 43874289 - 43874345
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||| |||||||||| ||||| ||| |||| |||||| ||||||    
T  43874289 taaataggaacaaaaaaattctctaaaagtgacacttaaaaagaaacggatggagta 43874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12838285 - 12838341
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  12838285 taaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 12838341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14771050 - 14771014
Alignment:
Q  22 tctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  14771050 tctaaaactgacacttaaaaaggaacggagggagtag 14771014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 15221502 - 15221466
Alignment:
Q  22 tctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  15221502 tctaaaactgacacttaaaaaggaacggagggagtag 15221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18194421 - 18194477
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||   ||||||||||| ||||| ||| ||| ||||||||||||||    
T  18194421 taaataggaacaaattttttctctaaaagtgacagttaaaaaagaacggagggagta 18194477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35746851 - 35746907
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| || ||||| |||||| |||| ||||||||| ||||| ||||||||||||    
T  35746851 taaatagaaataaaaattttctccaaaagtgacaattaaaaaggtacggagggagta 35746907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46286052 - 46286108
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||| |||| ||||| ||| ||| ||||||||| ||||    
T  46286052 taaataagaacaaaaaatttctccaaaagtgacagttaaaaaagaacggaggaagta 46286108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 46563338 - 46563386
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||  |||| ||||||||| ||||||||||||| ||||    
T  46563338 aacaaaaaatttctgcaaaagtgacaattaaaaaggaacggaggtagta 46563386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5144199 - 5144255
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  5144199 taaataggaacaaaaaatttctccaaaaatgacaattaaaaaggaacggagggagta 5144255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38702159 - 38702103
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  38702159 taaataggaacaaaaaatttctccaaaattgacacttaaaaaggaacggagggagta 38702103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26854295 - 26854352
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||| ||||||||||    
T  26854295 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacagagggagtag 26854352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4175681 - 4175737
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  4175681 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 4175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5843194 - 5843250
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||||||||| | || |||| |||||||| |||||||||    
T  5843194 taaataggaacaaaaaatttctctaaaagtaacgattaaaaaggaacagagggagta 5843250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7579869 - 7579925
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  7579869 taaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 7579925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21606459 - 21606515
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| ||||  |||| ||| ||||||||||||||||||    
T  21606459 taaataggaacaaaaaatttctccaaaagagacatttaaaaaggaacggagggagta 21606515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42394329 - 42394385
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| ||||||||||||||||||    
T  42394329 taaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacggagggagta 42394385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10889295 - 10889349
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggag 55  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||||||||||||||||    
T  10889295 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggag 10889349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 1795325 - 1795374
Alignment:
Q  8 gaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  1795325 gaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 1795374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6007901 - 6007845
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| ||||||||||| ||||||    
T  6007901 taaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggatggagta 6007845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8825075 - 8825019
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||| |||| ||||| ||| ||||||||||| ||||||    
T  8825075 taaatatgaacaaaaaatttctcaaaaaatgacacttaaaaaggaacggaaggagta 8825019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18465719 - 18465663
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| |||||||||| |||||||    
T  18465719 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggtgggagta 18465663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18794801 - 18794745
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| ||||||| ||||||||||    
T  18794801 taaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaatggagggagta 18794745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19831741 - 19831797
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||||||||  |||| ||| |||||||| |||||||||    
T  19831741 taaatagaaacaaaaaatttctctaaaaaagacacttaaaaaggaacagagggagta 19831797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25343978 - 25343922
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||| |||||| |||| ||||| ||||||||||||||| ||||||    
T  25343978 taaatagaaacaaaaattttctccaaaagtgacacttacaaaggaacggaaggagta 25343922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28447185 - 28447241
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| ||||  |||| ||| ||||||||||||||||||    
T  28447185 taaataggaacaaaaattttctccaaaagagacacttaaaaaggaacggagggagta 28447241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 28463594 - 28463642
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  28463594 aacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 28463642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14793991 - 14794042
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagg 52  Q
    ||||||| ||||||||||||||| ||||| |||| ||| |||||||||||||    
T  14793991 taaatagaaacaaaaaatttctccaaaacagacatttaaaaaggaacggagg 14794042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25027925 - 25027976
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagg 52  Q
    ||||| ||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  25027925 taaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagg 25027976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13703113 - 13703063
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggag 51  Q
    ||||||| || ||||||||||||||||| |||| |||| ||||||||||||    
T  13703113 taaatagaaataaaaaatttctctaaaagtgacgattaaaaaggaacggag 13703063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7403870 - 7403816
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| ||||||||||||||||  ||| ||||| ||| ||||||||||||||||||    
T  7403870 taaatatgaacaaaaaatttctc--aaagtgacacttataaaggaacggagggagta 7403816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30368316 - 30368373
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||| |||||||||| |||| |||||  |||| ||| |||||||||||||||||||    
T  30368316 taaataagaacaaaaaaattctttaaaagagacacttaaaaaggaacggagggagtag 30368373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 38297829 - 38297874
Alignment:
Q  12 aaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  38297829 aaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 38297874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 425139 - 425091
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||| |||| ||||| ||| ||| ||||||||||||||    
T  425139 aacaaaaaatttctccaaaagtgacacttaaaaatgaacggagggagta 425091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1297939 - 1297995
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||| |||||||| |||||    
T  1297939 taaataggaacaaaaattttctccaaaagtgacacttaaaaaagaacggagagagta 1297995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3686411 - 3686356
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||| | ||| |||| ||||| ||| ||||||||||||||||||    
T  3686411 taaataggaacaaaaaaat-ctccaaaagtgacacttaaaaaggaacggagggagta 3686356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9959078 - 9959134
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||| ||||||||||  |||||  || ||||||||||||||||||    
T  9959078 taaatagaaacaaaaattttctctaaatgtgacacgtaaaaaggaacggagggagta 9959134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12664876 - 12664820
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| | ||| ||| |||| |||||||||||||    
T  12664876 taaataggaacaaaaattttctccaaaagtaacacttaaaaagaaacggagggagta 12664820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12723160 - 12723216
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| |||||||| |||||||||    
T  12723160 taaataggaacaaaatttttctccaaaaatgacagttaaaaaggaacagagggagta 12723216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12784643 - 12784699
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| |||| |||||||||||||    
T  12784643 taaataggaacaaaatttttctccaaaaatgacagttaaaaagaaacggagggagta 12784699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 13957369 - 13957417
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||| |||| ||||| ||||| ||| ||||||||||||||||||    
T  13957369 aacaaaaaaattctgtaaaagtgacagttataaaggaacggagggagta 13957417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32440113 - 32440169
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| ||||||  ||| ||||| ||| |||||||| |||||||||    
T  32440113 taaataggaacaaaaattttctcctaaagtgacacttaaaaaggaacagagggagta 32440169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38363209 - 38363153
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| | ||| ||| ||||||||||| ||||||    
T  38363209 taaataggaacaaaaattttctccaaaagtaacacttaaaaaggaacggatggagta 38363153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38503001 - 38503057
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||  ||||  |||| ||| ||||||||||||||||||    
T  38503001 taaatatgaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagta 38503057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38910292 - 38910236
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| ||| |||||||| |||||    
T  38910292 taaatagaaacaaaaaatttctccaaaagtgacacttaaaaaagaacggagagagta 38910236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 8e-17; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34361095 - 34361039
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  34361095 taaataggaacaaaaaatttctctaaaagtgacaattaaaaagaaacggagggagta 34361039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42133076 - 42133020
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  42133076 taaataggaacaaaaaatttctctaaaagtgacgattaaaaaggaacggagggagta 42133020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43888022 - 43887966
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  43888022 taaataggaacaaaaaatttatctaaaagtgacaattaaaaaggaacggagggagta 43887966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52677350 - 52677406
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  52677350 taaataggaacaaaaaatttctctaaaagtgacacttaaaaaggaacggagggagta 52677406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 36292658 - 36292607
Alignment:
Q  7 ggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  36292658 ggaacaaaaaatttctctaaaagtgagaattaaaaaggaacggagggagtag 36292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 53691859 - 53691909
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggag 51  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||    
T  53691859 taaattggaacaaaaaatttctctaaaagtgacaattaaaaaggaacggag 53691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9834303 - 9834247
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||| |||||||||    
T  9834303 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaactgagggagta 9834247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13629398 - 13629454
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| ||||||||||||||||||    
T  13629398 taaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacggagggagta 13629454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30939194 - 30939138
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||||||||||||||| ||||||||| |||| |||||||| ||||    
T  30939194 taaatagaaacaaaaaatttctctaaaagtgacaattaaaaagaaacggaggaagta 30939138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36408762 - 36408706
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  36408762 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 36408706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36422928 - 36422872
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  36422928 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 36422872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37502060 - 37502004
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  37502060 taaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 37502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38617512 - 38617568
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||| ||||||| |||| ||||| ||| ||||||||||||||||||    
T  38617512 taaataggaacaaaatatttctccaaaagtgacacttaaaaaggaacggagggagta 38617568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12252139 - 12252080
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtaggt 60  Q
    |||||||||||||||| |||||  |||| ||||| ||| |||||||||||||||||||||    
T  12252139 taaataggaacaaaaattttcttcaaaagtgacacttaaaaaggaacggagggagtaggt 12252080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23719989 - 23720040
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagg 52  Q
    |||| ||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  23719989 taaacaggaacaaaaaatttctctaaaagtgacacttaaaaaggaacggagg 23720040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31862191 - 31862248
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||||||||||||| |||||| ||||  |||| ||| |||||||||||||||||||    
T  31862191 taaataggaacaaaaattttctccaaaagagacacttaaaaaggaacggagggagtag 31862248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39671364 - 39671307
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||| |||||||||||||||| |||| |||||||||  ||||||||||| ||||||    
T  39671364 taaataagaacaaaaaatttctccaaaagtgacaattatgaaggaacggagagagtag 39671307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46871960 - 46871903
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||||||||||||||||| || |||| ||||| ||| ||||||||||||| |||||    
T  46871960 taaataggaacaaaaaatttatccaaaagtgacacttaaaaaggaacggaggaagtag 46871903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3436272 - 3436328
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  3436272 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 3436328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4201523 - 4201579
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  ||||  |||| ||| ||||||||||||||||||    
T  4201523 taaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagta 4201579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16464987 - 16465047
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtaggtg 61  Q
    ||||||| ||||||||||||||  |||| ||||| ||| ||||||||||| ||||||||||    
T  16464987 taaatagtaacaaaaaatttcttcaaaagtgacacttaaaaaggaacggatggagtaggtg 16465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16664280 - 16664224
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||| |||||| ||||||| |||| ||||| ||| ||||||||||||||||||    
T  16664280 taaatagggacaaaatatttctccaaaagtgacacttaaaaaggaacggagggagta 16664224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19527413 - 19527469
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| |||| |||||||||||||    
T  19527413 taaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggagta 19527469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21044952 - 21045008
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| |||||||| |||||||||    
T  21044952 taaataggaacaaaaattttctcaaaaagtgacacttaaaaaggaactgagggagta 21045008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33809126 - 33809070
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| ||||||||| |||||| |||| ||||||||| |||||||||||| |||||    
T  33809126 taaataagaacaaaaattttctccaaaagtgacaattaaaaaggaacggagagagta 33809070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 34603655 - 34603607
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||| ||||| ||||| ||| ||||||||||||||||||    
T  34603655 aacaaaaaatttctgtaaaagtgacagttataaaggaacggagggagta 34603607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37394364 - 37394420
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| |||||||||||| |||||    
T  37394364 taaatagaaacaaaaaatttctccaaaaatgacatttagaaaggaacggagagagta 37394420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 37551878 - 37551926
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||  |||| ||||||||| ||||||||||||||||||    
T  37551878 aacaaaaaatttctacaaaagtgacaattaaaaaggaacggagggagta 37551926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44217745 - 44217689
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| ||||| ||| |||||||||||| |||||    
T  44217745 taaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagagagta 44217689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 47751576 - 47751520
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||| ||||||||||||||||| |||| ||||| ||| ||||||||||| ||||||    
T  47751576 taaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggaaggagta 47751520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48782239 - 48782183
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||| || |||| ||||| ||| |||| |||||||||||||    
T  48782239 taaataggaacaaaaaatttatccaaaagtgacacttaaaaagaaacggagggagta 48782183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 53599991 - 53600047
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  53599991 taaataggaacaaaatttttctccaaaaatgacacttaaaaaggaacggagggagta 53600047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 56576308 - 56576364
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  56576308 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 56576364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23237449 - 23237399
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggag 51  Q
    ||||||||||||||||| ||||| |||| ||||| ||| ||||||||||||    
T  23237449 taaataggaacaaaaaaattctccaaaaatgacacttaaaaaggaacggag 23237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27492398 - 27492344
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggag 55  Q
    |||||||||||||||| |||||| |||| ||||| ||| |||| |||||||||||    
T  27492398 taaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggag 27492344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31984306 - 31984356
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggag 51  Q
    ||||||||||||||||||||||| ||||  |||| ||| ||||||||||||    
T  31984306 taaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacggag 31984356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 5374562 - 5374611
Alignment:
Q  8 gaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||| ||||| ||| |||| |||||||||||||    
T  5374562 gaacaaaaaatttctccaaaagtgacacttaaaaagaaacggagggagta 5374611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19093358 - 19093415
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||| |||||||||||||| |||||  |||| ||| |||| ||||||||||||||    
T  19093358 taaatagaaacaaaaaatttctttaaaagagacacttaaaaagaaacggagggagtag 19093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22828606 - 22828663
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||| ||||||||| ||||| ||||  |||| ||| |||||||||||||||||||    
T  22828606 taaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagtag 22828663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23623700 - 23623753
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggaggga 54  Q
    ||||||| |||||||| |||||| |||| ||||| ||| |||||||||||||||    
T  23623700 taaatagtaacaaaaattttctcaaaaagtgacacttaaaaaggaacggaggga 23623753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29295393 - 29295336
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||| |||||||||||    
T  29295393 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaaaggagggagtag 29295336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38617855 - 38617806
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacgga 50  Q
    |||||||||||| | | ||||||||||| ||||||||| |||||||||||    
T  38617855 taaataggaacagatagtttctctaaaagtgacaattaaaaaggaacgga 38617806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 3802191 - 3802143
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||| |  |||| ||||||||| ||||||||||||||||||    
T  3802191 aacaaaaaatttatgcaaaaatgacaattaaaaaggaacggagggagta 3802143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 18091273 - 18091225
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||| ||||| ||||| ||| ||||||||||||| ||||    
T  18091273 aacaaaaaatttctgtaaaagtgacagttataaaggaacggaggtagta 18091225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 19740761 - 19740801
Alignment:
Q  18 tttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||| ||||||||| ||||||| |||||||||||    
T  19740761 tttctctaaaagtgacaattaaaaaggaatggagggagtag 19740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32239439 - 32239383
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| ||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  32239439 taaatatgaacaaaatttttctccaaaagtgacatttaaaaaggaacggagggagta 32239383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 33755298 - 33755346
Alignment:
Q  12 aaaaaatttctctaaaactgacaattacaaaggaacggagggagtaggt 60  Q
    ||||| ||||||||||| ||||| ||| ||||||||| |||||||||||    
T  33755298 aaaaattttctctaaaagtgacacttaaaaaggaacgaagggagtaggt 33755346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36750216 - 36750160
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| |||||||| |||| ||||    
T  36750216 taaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacagaggaagta 36750160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42099747 - 42099691
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||| ||||| ||||  |||| ||| ||||||||||||||||||    
T  42099747 taaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagta 42099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44069070 - 44069014
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||  |||| ||||| ||| ||||||||||||||||||    
T  44069070 taaataggaacaaaatttttctacaaaagtgacacttaaaaaggaacggagggagta 44069014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 47093851 - 47093795
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| ||||||| ||||| ||||    
T  47093851 taaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaatggaggaagta 47093795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 47428568 - 47428512
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||| ||||||||||    
T  47428568 taaataggaacaaaatttttctccaaaagtgacacttataaaggaatggagggagta 47428512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 55935146 - 55935090
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||||||||| |||| | ||| ||| ||||||||||| ||||||    
T  55935146 taaatagaaacaaaaaatttctccaaaaataacacttaaaaaggaacggatggagta 55935090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39303720 - 39303779
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtaggt 60  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  39303720 taaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggagggagtaggt 39303779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8731031 - 8731088
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  8731031 taaataggaacaaaaaatttctccaaaaatgacacttagaaaggaacggagggagtag 8731088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17718539 - 17718483
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||| || |||| ||||||||| ||||||||||||||||||    
T  17718539 taaataggaacaaaaaatttatccaaaagtgacaattaaaaaggaacggagggagta 17718483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34046887 - 34046831
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  34046887 taaatagaaacaaaaaatttctctaaaagtgacacttaaaaaggaacggagggagta 34046831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6750651 - 6750597
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggag 55  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||| |||||||    
T  6750651 taaataggaacaaaaaatttctccaaaaatgacaattaaaaaggaacagagggag 6750597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6757442 - 6757388
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggag 55  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||| |||||||    
T  6757442 taaataggaacaaaaaatttctccaaaaatgacaattaaaaaggaacagagggag 6757388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2335469 - 2335412
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||||| |||||||    
T  2335469 taaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggatggagtag 2335412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3720716 - 3720660
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||| |  |||| ||||||||| ||||||||||||||||||    
T  3720716 taaataggaacaaaaaatttattcaaaagtgacaattaaaaaggaacggagggagta 3720660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14263580 - 14263524
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  14263580 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 14263524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23429945 - 23429889
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  23429945 taaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 23429889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 43553447 - 43553503
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| ||||  |||| ||| ||||||||||||||||||    
T  43553447 taaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacggagggagta 43553503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 7483779 - 7483724
Alignment:
Q  2 aaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||| |||| ||||| ||| ||||||||||| ||||||    
T  7483779 aaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggatggagta 7483724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2888672 - 2888729
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||||||||||| ||||| ||||  |||| ||| |||||||||||||||||||    
T  2888672 taaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagtag 2888729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18842566 - 18842513
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggaggga 54  Q
    ||||||||||||||||| ||||| |||| ||||| ||| |||||||||||||||    
T  18842566 taaataggaacaaaaaaattctccaaaagtgacacttaaaaaggaacggaggga 18842513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25703781 - 25703837
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||| ||||||  |||| ||||| ||| ||||||||||||||||||    
T  25703781 taaataggaacaaaatatttcttcaaaagtgacacttaaaaaggaacggagggagta 25703837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25812952 - 25813008
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||| ||||||  |||| ||||| ||| ||||||||||||||||||    
T  25812952 taaataggaacaaaatatttcttcaaaagtgacacttaaaaaggaacggagggagta 25813008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26062744 - 26062688
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||| || ||||||| ||||| ||| |||||||||||| |||||    
T  26062744 taaataggaacaaaaaaattttctaaaaatgacacttaaaaaggaacggagagagta 26062688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40521448 - 40521503
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||| |||||||||||| |||| ||||||||| |||||||||| |||||||    
T  40521448 taaataggaa-aaaaaatttctccaaaagtgacaattaaaaaggaacggggggagta 40521503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16701097 - 16701150
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggaggga 54  Q
    |||||||||||||||  |||||| |||| ||||| ||| |||||||||||||||    
T  16701097 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggaggga 16701150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38221848 - 38221792
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagtag 58  Q
    ||||||||| |||||||||||||||||| ||||| ||| |||| ||||||| ||||||    
T  38221848 taaatagga-caaaaaatttctctaaaaatgacacttaaaaagaaacggagagagtag 38221792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13173965 - 13173909
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| ||||||| ||| ||||| ||| ||||||||  ||||||||    
T  13173965 taaataggaacaaaaactttctcttaaagtgacacttaaaaaggaacatagggagta 13173909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15596380 - 15596324
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||||| ||||| ||||  |||| ||| ||||||||||||||||||    
T  15596380 taaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagta 15596324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21651950 - 21652006
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  ||||  |||| ||| |||||||||||| |||||    
T  21651950 taaataggaacaaaaaatttcttcaaaaaagacacttaaaaaggaacggagagagta 21652006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23848760 - 23848816
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||| ||||    
T  23848760 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggaggtagta 23848816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27518911 - 27518967
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  ||||  |||| ||| |||||||||||| |||||    
T  27518911 taaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagagagta 27518967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32010307 - 32010362
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| ||||  |||| ||| ||||||||||| ||||||    
T  32010307 taaataggaacaaaaaatttctccaaaa-agacacttaaaaaggaacggatggagta 32010362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 34981861 - 34981809
Alignment:
Q  5 taggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||| ||||  |||| ||| |||| |||||||||||||    
T  34981861 taggaacaaaaaatttctccaaaagcgacacttaaaaagtaacggagggagta 34981809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 45317680 - 45317632
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||| |||| ||||| ||||| ||| ||||||||||||||||||    
T  45317680 aacaaaaaaattctgtaaaagtgacagttataaaggaacggagggagta 45317632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 147333 - 147387
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggag 55  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  147333 taaatatgaacaaaaaatttctctaaaagtgacaattaaaaaggaacggagggag 147387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1677252 - 1677196
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  1677252 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 1677196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32168513 - 32168569
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  32168513 taaatagaaacaaaaattttctctaaaagtgacaattaaaaaggaacggagggagta 32168569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 51613447 - 51613391
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||    
T  51613447 taaataggaacaaaaattttctctaaaagtgacaattaaaaaggaatggagggagta 51613391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8464650 - 8464706
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||| ||||||||||||||    
T  8464650 taaataggaacaaaaaatttctccaaaagtgacacttaaaaacgaacggagggagta 8464706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9362009 - 9361953
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  |||| ||||| ||| ||||||||||||||||||    
T  9362009 taaataggaacaaaaaatttcttcaaaaatgacacttaaaaaggaacggagggagta 9361953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31588940 - 31588996
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||| ||||||||||| ||||| ||| ||||||||||||||||||    
T  31588940 taaatagaaacaaaaattttctctaaaaatgacacttaaaaaggaacggagggagta 31588996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 45226778 - 45226829
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagg 52  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  45226778 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagg 45226829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1429320 - 1429264
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||| |||| ||||| ||| ||| ||||||||||||||    
T  1429320 taaataggaacaaaaattttctccaaaagtgacacttagaaaagaacggagggagta 1429264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13507806 - 13507750
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||  ||||||||    
T  13507806 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacttagggagta 13507750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13514994 - 13514938
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||  ||||||||    
T  13514994 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacttagggagta 13514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15660623 - 15660567
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||| ||||||| |||| ||||| ||| |||||||||||| |||||    
T  15660623 taaataggaacaaaatatttctccaaaaatgacacttaaaaaggaacggagagagta 15660567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18034027 - 18034083
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||| |||||||||||| |||| ||||| ||| ||||||||||| ||||||    
T  18034027 taaataggaataaaaaatttctcaaaaagtgacacttaaaaaggaacggatggagta 18034083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19929667 - 19929723
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| ||||  |||| ||| |||| |||||||||||||    
T  19929667 taaataggaacaaaaaatttctccaaaagagacacttaaaaagaaacggagggagta 19929723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21927897 - 21927953
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||  |||| ||||| ||| ||||||||||||||||||    
T  21927897 taaataagaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggagggagta 21927953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30686447 - 30686391
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| ||||||||  ||||||||    
T  30686447 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacatagggagta 30686391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31570838 - 31570894
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||| ||||  |||| ||| ||||||||||||||||||    
T  31570838 taaatatgaacaaaaaatttctccaaaagagacacttaaaaaggaacggagggagta 31570894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35531496 - 35531552
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||    
T  35531496 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 35531552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36318389 - 36318333
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||||||| ||||||| ||||| ||| ||||||||||||| ||||    
T  36318389 taaatagaaacaaaaaatttatctaaaagtgacacttaaaaaggaacggaggaagta 36318333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43808934 - 43808890
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaagga 45  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||    
T  43808934 taaataggaacaaaaaatttctccaaaagtgacaattaaaaagga 43808890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 48174881 - 48174924
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagg 52  Q
    |||||||||||||||||||| | ||||||| |||||||||||||    
T  48174881 aacaaaaaatttctctaaaaataacaattaaaaaggaacggagg 48174924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 52749052 - 52748997
Alignment:
Q  2 aaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||||||  |||| ||||| ||| |||| |||||||||||||    
T  52749052 aaataggaacaaaaaatttcttcaaaaatgacatttaaaaagaaacggagggagta 52748997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 1428253 - 1428199
Alignment:
Q  3 aataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||| |||||||||||||||||||||||| | ||| ||||||| ||||| ||||    
T  1428253 aatagaaacaaaaaatttctctaaaactgatacttaaaaaggaagggaggtagta 1428199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19093304 - 19093251
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggaggga 54  Q
    |||||||||||||||  |||||| |||| ||||| ||| |||||||||||||||    
T  19093304 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggaggga 19093251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1038119 - 1038071
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacgg 49  Q
    ||||||||||||||   ||||||||||| ||||||||| ||||||||||    
T  1038119 taaataggaacaaattttttctctaaaagtgacaattaaaaaggaacgg 1038071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1039568 - 1039624
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||   ||||||||||  ||||||||| ||||||||||||||||||    
T  1039568 taaataagaacaaattttttctctaaaggtgacaattaaaaaggaacggagggagta 1039624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1045025 - 1044977
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacgg 49  Q
    ||||||||||||||   ||||||||||| ||||||||| ||||||||||    
T  1045025 taaataggaacaaattttttctctaaaagtgacaattaaaaaggaacgg 1044977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1046474 - 1046530
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||   ||||||||||  ||||||||| ||||||||||||||||||    
T  1046474 taaataagaacaaattttttctctaaaggtgacaattaaaaaggaacggagggagta 1046530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10675938 - 10675882
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||  ||||  |||| ||| ||| ||||||||||||||    
T  10675938 taaataggaacaaaaaatttcttcaaaagagacacttaaaaaagaacggagggagta 10675882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37296926 - 37296982
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||||||||||||| ||||  |||| ||| ||| ||||||||||||||    
T  37296926 taaatatgaacaaaaaatttctccaaaagagacacttaaaaacgaacggagggagta 37296982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37609502 - 37609558
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| ||||||||| |||||| |||| ||||| ||| |||||||||||| |||||    
T  37609502 taaataagaacaaaaattttctccaaaagtgacacttaaaaaggaacggagagagta 37609558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48265237 - 48265293
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||||  |||| |||| ||||| ||| ||| ||||||||||||||    
T  48265237 taaataggaacaaaaaaaatctcgaaaagtgacacttaaaaaagaacggagggagta 48265293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49908383 - 49908439
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| |||||||  ||||| ||||| ||||| ||| ||||||||||||||||||    
T  49908383 taaatagaaacaaaatttttctttaaaagtgacacttaaaaaggaacggagggagta 49908439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 52759056 - 52759008
Alignment:
Q  9 aacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||| ||||| ||||| ||| ||||||||||||| ||||    
T  52759056 aacaaaaaatttctgtaaaagtgacagttataaaggaacggaggtagta 52759008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 184332 - 184388
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||| |||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  184332 taaataggaataaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 184388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7460 - 7417
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaagg 44  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  7460 taaataggaacaaaaaatttctctaaaaatgacaattaaaaagg 7417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49183 - 49127
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||| || ||||||    
T  49183 taaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaactgatggagta 49127  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 195943 - 195999
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| ||||||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  195943 taaataagaacaaaaattttctccaaaaatgacacttaaaaaggaacggagggagta 195999  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 138936 - 138992
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||| |||||| || ||||||||||| ||||| ||| ||||||||||||||||||    
T  138936 taaataagaacaataattttctctaaaagtgacacttaaaaaggaacggagggagta 138992  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 419840 - 419890
Alignment:
Q  2 aaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagg 52  Q
    |||| ||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  419840 aaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagg 419890  T

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Target: scaffold0325 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 351 - 295
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||||| ||||||   ||||||||||| ||||||||| |||| |||||||||||||    
T  351 taaatagtaacaaattttttctctaaaagtgacaattaaaaagaaacggagggagta 295  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14926 - 14982
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    ||||| |||||||||| ||||||  ||| ||||| ||| ||||||||||||||||||    
T  14926 taaattggaacaaaaagtttctccgaaagtgacacttaaaaaggaacggagggagta 14982  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 69136 - 69080
Alignment:
Q  1 taaataggaacaaaaaatttctctaaaactgacaattacaaaggaacggagggagta 57  Q
    |||||||||||||||| |||||  |||| ||||| ||| |||| |||||||||||||    
T  69136 taaataggaacaaaaattttcttcaaaagtgacacttaaaaagaaacggagggagta 69080  T

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