View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10978_low_8 (Length: 300)
Name: NF10978_low_8
Description: NF10978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10978_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 7 - 280
Target Start/End: Complemental strand, 11800926 - 11800651
Alignment:
| Q |
7 |
gaagcataggattgggcaccaaacacttagtttagtgttgttattttaaatttaaaaaacaatagctcctacacaagatgggtgcacaaatcaagactaa |
106 |
Q |
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| T |
11800926 |
gaagcataggattgggcaccaaacacttagtttagtgttgttattttaaattttaaaaacaatagctcctacacaagatgggtgcacaaatcaagactaa |
11800827 |
T |
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| Q |
107 |
aaataagatcaagaataagattttgtttcccaatattgcatgcttaac--ataattaaattgattctattctatcatttatcaatttctttgagtcatgg |
204 |
Q |
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| T |
11800826 |
aaataagaacaagaataagattttgtttcccaatattgcattcttaacatataattaaattgaatctattctatcatttatcaatttctttgagtcatgg |
11800727 |
T |
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| Q |
205 |
catatttttgtcttaactctccgatttttaggtgaaagagacttgagtgattcaaaattctactcagagacaagta |
280 |
Q |
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| T |
11800726 |
catatttttgtcttaactctccgatttttaggtgaaagagatttgagtaattcaaaattctactcagagacaagta |
11800651 |
T |
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