View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10982_low_18 (Length: 375)

Name: NF10982_low_18
Description: NF10982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10982_low_18
NF10982_low_18
[»] chr1 (24 HSPs)
chr1 (78-356)||(28663700-28663976)
chr1 (136-356)||(28636186-28636406)
chr1 (141-356)||(28606406-28606621)
chr1 (138-356)||(28656682-28656900)
chr1 (7-78)||(1815240-1815310)
chr1 (5-76)||(13011223-13011294)
chr1 (5-74)||(18556466-18556534)
chr1 (5-78)||(38078667-38078739)
chr1 (5-78)||(46348389-46348461)
chr1 (6-78)||(22515893-22515964)
chr1 (5-77)||(14359529-14359599)
chr1 (1-78)||(42359455-42359531)
chr1 (5-78)||(48450593-48450665)
chr1 (16-76)||(113291-113350)
chr1 (5-53)||(10577766-10577813)
chr1 (10-78)||(22881622-22881689)
chr1 (43-82)||(26830606-26830645)
chr1 (16-78)||(51410016-51410078)
chr1 (5-58)||(398791-398843)
chr1 (5-78)||(1486715-1486787)
chr1 (1-58)||(2896147-2896203)
chr1 (5-77)||(5927347-5927418)
chr1 (10-78)||(24577192-24577259)
chr1 (16-76)||(32461471-32461530)
[»] chr6 (22 HSPs)
chr6 (5-78)||(426520-426592)
chr6 (10-78)||(3209367-3209435)
chr6 (5-75)||(17841598-17841667)
chr6 (16-78)||(32978905-32978967)
chr6 (9-78)||(16766682-16766750)
chr6 (5-77)||(12696305-12696376)
chr6 (5-77)||(17302537-17302609)
chr6 (5-78)||(28152080-28152151)
chr6 (5-78)||(9107376-9107448)
chr6 (1-78)||(33001295-33001371)
chr6 (5-78)||(34595115-34595187)
chr6 (5-76)||(8776981-8777051)
chr6 (16-78)||(853865-853926)
chr6 (16-78)||(4877934-4877996)
chr6 (16-78)||(7977836-7977897)
chr6 (43-76)||(4118341-4118374)
chr6 (9-78)||(7938101-7938169)
chr6 (5-78)||(8365525-8365597)
chr6 (9-78)||(10770680-10770748)
chr6 (1-78)||(15489738-15489814)
chr6 (5-78)||(16833289-16833361)
chr6 (5-78)||(31959140-31959212)
[»] chr2 (17 HSPs)
chr2 (5-78)||(37558958-37559030)
chr2 (5-78)||(6940236-6940308)
chr2 (9-78)||(11223869-11223937)
chr2 (5-78)||(14996229-14996302)
chr2 (5-78)||(19536403-19536476)
chr2 (5-78)||(21624247-21624320)
chr2 (5-78)||(20539680-20539752)
chr2 (5-58)||(24894370-24894422)
chr2 (5-78)||(30404856-30404928)
chr2 (5-77)||(21374706-21374777)
chr2 (5-78)||(18421944-18422016)
chr2 (9-78)||(18841019-18841087)
chr2 (9-58)||(20242753-20242801)
chr2 (9-58)||(27460011-27460060)
chr2 (5-78)||(30717536-30717608)
chr2 (5-58)||(34785008-34785060)
chr2 (9-53)||(18054834-18054878)
[»] chr8 (14 HSPs)
chr8 (5-78)||(22651957-22652029)
chr8 (17-78)||(4298892-4298952)
chr8 (5-78)||(20873050-20873122)
chr8 (5-78)||(29510310-29510382)
chr8 (10-78)||(18407705-18407772)
chr8 (7-78)||(15816135-15816205)
chr8 (16-78)||(24613513-24613573)
chr8 (8-75)||(30271300-30271366)
chr8 (5-76)||(36450762-36450832)
chr8 (11-81)||(41831943-41832012)
chr8 (5-78)||(2572062-2572134)
chr8 (9-58)||(13436990-13437038)
chr8 (11-76)||(22595981-22596045)
chr8 (5-77)||(8343297-8343368)
[»] chr5 (16 HSPs)
chr5 (5-78)||(14674250-14674322)
chr5 (10-78)||(31084309-31084376)
chr5 (5-78)||(21191062-21191134)
chr5 (5-78)||(21522731-21522803)
chr5 (5-78)||(21533297-21533369)
chr5 (7-77)||(39698524-39698593)
chr5 (2-78)||(19579679-19579754)
chr5 (11-78)||(6247609-6247675)
chr5 (19-78)||(15883982-15884041)
chr5 (5-60)||(19552567-19552621)
chr5 (16-78)||(8420019-8420080)
chr5 (16-78)||(30135305-30135367)
chr5 (16-78)||(33178017-33178078)
chr5 (24-77)||(17088284-17088337)
chr5 (5-78)||(21576751-21576823)
chr5 (9-78)||(42893345-42893413)
[»] chr4 (15 HSPs)
chr4 (5-78)||(30298927-30299000)
chr4 (5-78)||(30327795-30327868)
chr4 (16-77)||(28084513-28084574)
chr4 (16-78)||(49431017-49431079)
chr4 (5-78)||(12895122-12895193)
chr4 (5-78)||(23292992-23293064)
chr4 (5-78)||(31800484-31800556)
chr4 (5-53)||(5414203-5414250)
chr4 (10-78)||(12708132-12708200)
chr4 (17-76)||(715615-715674)
chr4 (17-76)||(752941-753000)
chr4 (5-78)||(21945484-21945556)
chr4 (1-78)||(35157991-35158067)
chr4 (5-77)||(3947773-3947844)
chr4 (10-75)||(50280867-50280933)
[»] scaffold0103 (1 HSPs)
scaffold0103 (5-76)||(51792-51862)
[»] chr3 (19 HSPs)
chr3 (7-78)||(27505229-27505299)
chr3 (5-78)||(8587027-8587099)
chr3 (10-73)||(14747547-14747610)
chr3 (11-76)||(4987299-4987363)
chr3 (16-77)||(14209105-14209165)
chr3 (5-78)||(28917982-28918054)
chr3 (5-78)||(55401056-55401128)
chr3 (9-77)||(10268493-10268560)
chr3 (10-78)||(35222924-35222991)
chr3 (6-77)||(14832081-14832151)
chr3 (16-82)||(35994740-35994804)
chr3 (5-78)||(14829671-14829742)
chr3 (16-78)||(26508102-26508163)
chr3 (5-78)||(10954933-10955005)
chr3 (5-77)||(14216873-14216944)
chr3 (5-77)||(14223002-14223073)
chr3 (17-69)||(21305238-21305290)
chr3 (10-78)||(21479104-21479171)
chr3 (10-58)||(40052318-40052365)
[»] scaffold0223 (1 HSPs)
scaffold0223 (5-77)||(20153-20224)
[»] chr7 (8 HSPs)
chr7 (1-76)||(25481879-25481953)
chr7 (5-79)||(13770672-13770745)
chr7 (16-78)||(24339634-24339695)
chr7 (5-78)||(11061082-11061154)
chr7 (5-58)||(18213059-18213112)
chr7 (11-78)||(7438693-7438759)
chr7 (16-78)||(7197303-7197364)
chr7 (5-78)||(24105659-24105731)
[»] scaffold0053 (1 HSPs)
scaffold0053 (5-78)||(8779-8851)
[»] scaffold0793 (1 HSPs)
scaffold0793 (17-76)||(4891-4950)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-78)||(45536-45613)
[»] scaffold0066 (1 HSPs)
scaffold0066 (13-82)||(33366-33433)
[»] scaffold0027 (1 HSPs)
scaffold0027 (5-78)||(46663-46735)
[»] scaffold0021 (1 HSPs)
scaffold0021 (5-78)||(130463-130535)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-77)||(178825-178897)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-58)||(241575-241627)
[»] scaffold0652 (1 HSPs)
scaffold0652 (6-78)||(468-539)
[»] scaffold0007 (1 HSPs)
scaffold0007 (5-81)||(225271-225346)


Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 78 - 356
Target Start/End: Original strand, 28663700 - 28663976
Alignment:
Q  78 gtgtccgtgcttcatatacattatataacatttacttcaaaagtcaaacataaacataattaattggtcactttgattcaatcaggaggacactcagtgg 177  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28663700 gtgtctgtgcttcatatacattata--acatttacttcaaaagtcaaacataaacataattaattggtcactttgattcaatcaggaggacactcagtgg 28663797  T
Q  178 gaagagtacattgcatgaatttggtccacagactataccccacagtggacccaaagctagaccccacatatgttgcctacttaaaacttagatgcccaac 277  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  28663798 gaagagtacattgcatgaatatggtccatagactataccccacggtggacccaaagctagaccccacatatgctgcctatctaaaacttagatgcccaac 28663897  T
Q  278 accaaatccagatccaaatgctgttttatatgcaagaaatgatagaaaaacaccaatgataattgacaacaactactac 356  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28663898 accaaatccagatccaaatgctgttctatatgcaagaaatgatagaaaaacaccaatgataattgacaacaactactac 28663976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 136 - 356
Target Start/End: Original strand, 28636186 - 28636406
Alignment:
Q  136 attaattggtcactttgattcaatcaggaggacactcagtgggaagagtacattgcatgaatttggtccacagactataccccacagtggacccaaagct 235  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |    
T  28636186 attaactggtcactttgattaaatcaggagcacactcagttggaagagtacattgcatgaatttggtccacagactataccccacagtggatccaacgtt 28636285  T
Q  236 agaccccacatatgttgcctacttaaaacttagatgcccaacaccaaatccagatccaaatgctgttttatatgcaagaaatgatagaaaaacaccaatg 335  Q
    ||| || ||| ||| | ||||| |||||| ||| |||||||||||||||||||||||||| |||||   |||||  || ||||||  |||||||||||||    
T  28636286 agatcctacacatgctacctacctaaaacgtaggtgcccaacaccaaatccagatccaaaagctgtccaatatgtgaggaatgatctaaaaacaccaatg 28636385  T
Q  336 ataattgacaacaactactac 356  Q
    |||||||||||||||||||||    
T  28636386 ataattgacaacaactactac 28636406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 141 - 356
Target Start/End: Original strand, 28606406 - 28606621
Alignment:
Q  141 ttggtcactttgattcaatcaggaggacactcagtgggaagagtacattgcatgaatttggtccacagactataccccacagtggacccaaagctagacc 240  Q
    ||||||||||||||||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |    
T  28606406 ttggtcactttgattcaattaggagcacactcggttggaagagtacattgcatgaatttggtccacagactataccccacagtggatccaacgttagatc 28606505  T
Q  241 ccacatatgttgcctacttaaaacttagatgcccaacaccaaatccagatccaaatgctgttttatatgcaagaaatgatagaaaaacaccaatgataat 340  Q
    | ||| ||| ||||||| |||||| ||| |||||||||||||||||||||||||| |||||   |||||  || ||||||  ||||||||||||||||||    
T  28606506 ctacacatgctgcctacctaaaacgtaggtgcccaacaccaaatccagatccaaaagctgtccaatatgtgaggaatgatctaaaaacaccaatgataat 28606605  T
Q  341 tgacaacaactactac 356  Q
    ||||||||||||||||    
T  28606606 tgacaacaactactac 28606621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 138 - 356
Target Start/End: Original strand, 28656682 - 28656900
Alignment:
Q  138 taattggtcactttgattcaatcaggaggacactcagtgggaagagtacattgcatgaatttggtccacagactataccccacagtggacccaaagctag 237  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||||||||||||||| | ||||||||||| |||||    
T  28656682 taattggtcactatgattgaatcaggagcacattcagtgggaagagtacactgcataaatatggtccacagactataccctatagtggacccaacgctag 28656781  T
Q  238 accccacatatgttgcctacttaaaacttagatgcccaacaccaaatccagatccaaatgctgttttatatgcaagaaatgatagaaaaacaccaatgat 337  Q
    |||| |||||||||| |||| |||||| |||||| |||| |||||| ||| |  |||| |||||   ||||| ||| ||||||  |||||| ||| ||||    
T  28656782 accctacatatgttgtctacctaaaacgtagatgtccaaaaccaaacccaaaggcaaaagctgtccaatatgtaaggaatgatctaaaaactccattgat 28656881  T
Q  338 aattgacaacaactactac 356  Q
    |||||||||||||||||||    
T  28656882 aattgacaacaactactac 28656900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 1815240 - 1815310
Alignment:
Q  7 acggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||| ||||||||||||||  |||||||||| |||||||||||||||| | ||| |||||||||||||    
T  1815240 acggacactgacacgccgacacaaataattatttt-aaaaaatcacataattcagtgtaattacaagtgtcg 1815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 13011294 - 13011223
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    ||||| |||| |||| ||||||||||||||| ||||  |||||||||||||||||| ||| |||||||||||    
T  13011294 acacgaacactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 18556534 - 18556466
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagt 74  Q
    |||||||||| ||||||||||||||||||| || ||| |||| ||||||||||| ||||| |||||||||    
T  18556534 acacggacactgacacgccgacacagctaa-taatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 38078739 - 38078667
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||| |||||| ||||||||||||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  38078739 acacgaacactgacacgtcgacacagctaataatttg-aaaaaatcacataattcaatgtaattacaagtgtcg 38078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 46348461 - 46348389
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||| ||||||||| |||||| | ||| |||||||||||||    
T  46348461 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 22515964 - 22515893
Alignment:
Q  6 cacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||||| ||||||| |||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  22515964 cacggacacggacacgcagacacagctaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 22515893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 14359599 - 14359529
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||| ||||| |||||||||||||||||||| |  ||| ||||||||||||||| | ||| ||||||||||||    
T  14359599 acacagacacggacacgccgacacagctaataa--tttgaaaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42359531 - 42359455
Alignment:
Q  1 cacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||| ||||||| |||||| |||| || ||| ||||||||||| |||| | ||| |||||||||||||    
T  42359531 cacaacacggacactgacacgctgacacatctaa-taatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 42359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 48450665 - 48450593
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||| |||||||||| || ||| ||||||| |||||||| | ||| |||||||||||||    
T  48450665 acacggacactgacacgccaacacagctaa-taatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 113291 - 113350
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||||||||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  113291 gacacgccgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 10577813 - 10577766
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcaca 53  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  10577813 acacggacaccgacacgccgacacagctaatt-tttttagaaaatcaca 10577766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 22881689 - 22881622
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 22881622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 26830606 - 26830645
Alignment:
Q  43 aaaaaatcacataattaaatgtgattacaagtgtcgtgtc 82  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  26830606 aaaaaatcacataattaaatgtaattataagtgtcgtgtc 26830645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 51410016 - 51410078
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||| ||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  51410016 gacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 51410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 398843 - 398791
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||||||| ||||||||||||| ||||| || ||| ||||||||||||||||    
T  398843 acacggacactgacacgccgacaccgctaa-taatttgaaaaaatcacataatt 398791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 1486787 - 1486715
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||| || ||||||| |||||||||||| ||||  |||||||||||||||| | ||| |||| ||||||||    
T  1486787 acacggatactgacacgctgacacagctaataatttg-aaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2896203 - 2896147
Alignment:
Q  1 cacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||||||||||| ||||||||||||| ||||| || ||| | ||||||||||||||    
T  2896203 cacaacacggacactgacacgccgacaccgctaa-taatttgagaaaatcacataatt 2896147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 5927418 - 5927347
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||||||| |||||||  |||| |||||| ||||  ||||||||| |||||| ||||| ||||||||||||    
T  5927418 acacggacactgacacgctaacactgctaataatttg-aaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 24577259 - 24577192
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| ||||||| |||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  24577259 gacacggacacgctgacacaactaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 24577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 32461530 - 32461471
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    ||||||||| |||| ||||| ||||  |||||||||||||||| ||||| |||||||||||    
T  32461530 gacacgccggcacaactaataatttg-aaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 426592 - 426520
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||| |||| ||||  |||||||||||||||||||||| |||||||||||||    
T  426592 acacggacactgacacgccgacacagttaataatttg-aaaaaatcacataattaaatgtaattacaagtgtcg 426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 3209367 - 3209435
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  3209367 gacacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcg 3209435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 17841667 - 17841598
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtg 75  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| | ||| ||||||||||    
T  17841667 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 32978967 - 32978905
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||||||||| ||||  |||||| ||||||||||| ||| |||||||||||||    
T  32978967 gacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcg 32978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 16766682 - 16766750
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||| ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||||    
T  16766682 ggacactgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtcg 16766750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 12696305 - 12696376
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||||||| ||||||||||||||||||| || ||| ||||||| |||||||| | ||| ||||||||||||    
T  12696305 acacggacactgacacgccgacacagctaa-taatttgaaaaaattacataattcagtgtaattacaagtgtc 12696376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 17302537 - 17302609
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    ||||| |||| ||||||| |||||| ||||| ||||  |||||||||||||||| ||||| ||||||||||||    
T  17302537 acacgaacactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 28152080 - 28152151
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||||||| ||||||| |  ||| ||||||||||||||| | ||| |||||||||||||    
T  28152080 acacggacactgacacgccgacaaagctaataa--tttgaaaaatcacataattcagtgtaattacaagtgtcg 28152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 9107448 - 9107376
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||||||  |||||||||||||||||| || ||| ||||||||||| |||| | ||| |||||||||||||    
T  9107448 acacggacactaacacgccgacacagctaa-taatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 9107376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33001371 - 33001295
Alignment:
Q  1 cacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||  ||||||||||||| |||||| ||||  |||||||||||||||||||||| |||| | ||||||    
T  33001371 cacaacacggtcaatgacacgccgacactgctaataatttg-aaaaaatcacataattaaatgtaattatatgtgtcg 33001295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 34595115 - 34595187
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||  |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  34595115 acacggacaatgacacgccgacacaactaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 8777051 - 8776981
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||||||||| |||||||||||||| |||| || ||| ||||||||||| |||| | ||| |||||||||||    
T  8777051 acacggacactgacacgccgacacaactaa-taatttgaaaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 853926 - 853865
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||| ||||| ||||  |||||||||||||||||| ||  |||||||||||||    
T  853926 gacacgccgacacaactaataatttg-aaaaaatcacataattaagtgcaattacaagtgtcg 853865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 4877934 - 4877996
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||||||||||||| ||||  ||||| |||||||||||| | | |||||||||||||    
T  4877934 gacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcg 4877996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 7977897 - 7977836
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||||||||||||||| || ||| ||||||| |||||||| | ||| |||||||||||||    
T  7977897 gacacgccgacacagctaa-taatttgaaaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 4118374 - 4118341
Alignment:
Q  43 aaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||||||||||||||||||||| |||||||||||    
T  4118374 aaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 7938101 - 7938169
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||| ||||||||||||||||||| || ||| ||||||||| |||||| | ||| |||| ||||||||    
T  7938101 ggacactgacacgccgacacagctaa-taatttgaaaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 8365597 - 8365525
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||||||||| |||| || ||| |||| |||||||||||   ||| |||||||||||||    
T  8365597 acacggacactgacacgccgacacaactaa-taatttgaaaatatcacataattcggtgtaattacaagtgtcg 8365525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 10770748 - 10770680
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||| |||||||| ||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  10770748 ggacactgacacgccaacacaactaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 10770680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15489814 - 15489738
Alignment:
Q  1 cacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||||||||||  ||||| ||||||| ||||| ||||  ||||||| ||| |||| ||||| |||||||||||||    
T  15489814 cacaacacggacactaacacgtcgacacaactaataatttg-aaaaaattacacaattcaatgtaattacaagtgtcg 15489738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16833289 - 16833361
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||| ||||| |||||||||||||| |||| || ||| ||||||||||||| || | ||| |||||||||||||    
T  16833289 acacagacactgacacgccgacacaactaa-taatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 31959140 - 31959212
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||| ||||||||| |||||||||| ||||  |||||||||||||||  | ||| |||||||||||||    
T  31959140 acacgaacactgacacgccgtcacagctaataatttg-aaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 37558958 - 37559030
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||||||||||||||| |||| | ||||||||||||||| ||||| |||||||||||||    
T  37558958 acacggacactgacacgccgacacagctaataatttgt-aaaaatcacataattcaatgtaattacaagtgtcg 37559030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 6940236 - 6940308
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||||||||| | |||||||||| ||| |||||||||||||    
T  6940236 acacggacactgacacgccgacacagctaa-taattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 11223937 - 11223869
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||| |||||||||||| ||||| ||||||| |||||||| | ||| |||||||||||||    
T  11223937 ggacacagacacgctgacacagctaat-attttgaaaaaataacataattcagtgtaattacaagtgtcg 11223869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 14996302 - 14996229
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||| ||||||||||||||| ||||  ||||||||| |||||| | ||| |||||||||||||    
T  14996302 acacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcg 14996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 19536476 - 19536403
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||  |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  19536476 acacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 19536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 21624247 - 21624320
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||| ||||| |||||||||||||||||||| ||||| |||||||  ||||||| | ||| |||||||||||||    
T  21624247 acacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcg 21624320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 20539752 - 20539680
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||| |||||||||||| || ||| ||||||||| |||||| | ||| |||||||||||||    
T  20539752 acacggacactgacacgtcgacacagctaa-taatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 24894370 - 24894422
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  24894370 acacggacactgacacgccgacacagctaa-taatttaaaaaaatcacataatt 24894422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 30404928 - 30404856
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||| | |||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  30404928 acacggacactgacacgccgacacggttaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 21374777 - 21374706
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    ||||||||||  |||||||||||||||||| || ||| ||||||| |||||||| | ||| ||||||||||||    
T  21374777 acacggacactaacacgccgacacagctaa-taatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18421944 - 18422016
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||  ||| || ||| |||| ||||||||||| | ||| |||||||||||||    
T  18421944 acacggacactgacacgccgacacaattaa-taatttaaaaatatcacataattcagtgtaattacaagtgtcg 18422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 18841087 - 18841019
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||| ||||||| |||||| ||||| ||||  ||||||| |||||||||| ||| |||||||||||||    
T  18841087 ggacactgacacgctgacacaactaataatttg-aaaaaattacataattaagtgtaattacaagtgtcg 18841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 20242801 - 20242753
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||| |||||||||||||| |||||| |||||| ||||||||||||||    
T  20242801 ggacactgacacgccgacacaactaatt-tttttagaaaatcacataatt 20242753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 27460011 - 27460060
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||| |||||||||||||||||||| ||||  ||||||| ||||||||    
T  27460011 ggacactgacacgccgacacagctaataatttgaaaaaaatgacataatt 27460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 30717608 - 30717536
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||  |||||| ||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  30717608 acacggacactgacaaaccgacaaagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 30717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 34785060 - 34785008
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||||||| ||||| |||||||| |||||| |||||| ||||||||||||||    
T  34785060 acacggacactgacacaccgacacaactaatt-tttttagaaaatcacataatt 34785008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 18054878 - 18054834
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcaca 53  Q
    |||||| |||||| |||||||||||||| |||||| |||||||||    
T  18054878 ggacaccgacacgtcgacacagctaattttttttagaaaatcaca 18054834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22651957 - 22652029
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| ||| | |||||||||||||    
T  22651957 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcacataattcaatataattacaagtgtcg 22652029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 4298952 - 4298892
Alignment:
Q  17 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||| |||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  4298952 acacgccgacacagttaataatttg-aaaaaatcacataatttaatgtaattacaagtgtcg 4298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 20873050 - 20873122
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||||||| || |||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  20873050 acacggacactgacacgccgacatagataataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 29510382 - 29510310
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||| ||||||||||| |||| | | | |||||||||||||    
T  29510382 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 18407705 - 18407772
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||| |||   |||||||||||||||| | ||| |||||||||||||    
T  18407705 gacacagacatgccgacacagctaataattca-aaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 15816205 - 15816135
Alignment:
Q  7 acggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||| |||||||||||||| |||| || ||| |||||||||||||||| | ||| |||| ||||||||    
T  15816205 acggacactgacacgccgacacaactaa-taatttgaaaaaatcacataatttagtgtaattataagtgtcg 15816135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 24613513 - 24613573
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||||||||||||| ||||   ||||||||||||||||| ||| |||||||||||||    
T  24613513 gacacaccgacacagctaataatttg--aaaaatcacataattaagtgtaattacaagtgtcg 24613573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 30271366 - 30271300
Alignment:
Q  8 cggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtg 75  Q
    ||||||| |||||||||||||||||||| | ||| |||||||||||||||  | ||| ||||||||||    
T  30271366 cggacactgacacgccgacacagctaatca-tttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 36450832 - 36450762
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||||||||| |||||||||||||| |||| || ||| ||||||||||| |||| | ||| |||||||||||    
T  36450832 acacggacactgacacgccgacacaactaa-taatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 41832012 - 41831943
Alignment:
Q  11 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgt 81  Q
    ||||||||| |||||||||| |||| ||||  |||||||||||||||| | ||| | ||||||||||||||    
T  41832012 acacagacatgccgacacagttaataatttg-aaaaaatcacataattcagtgtaactacaagtgtcgtgt 41831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 2572134 - 2572062
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||| || |||||| ||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  2572134 acacggataccgacacgtcgacacacctaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 2572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 13437038 - 13436990
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  13437038 ggacactgacacgccgacacagctaa-taatttgaaaaaatcacataatt 13436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 22595981 - 22596045
Alignment:
Q  11 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||| ||||||||||||||||||| || ||| ||||||| |||||||| | ||| |||||||||||    
T  22595981 acactgacacgccgacacagctaa-taatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 8343297 - 8343368
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||| ||||| ||||| |||||| ||||||| ||||  |||||||||||||||| | ||| ||||||||||||    
T  8343297 acactgacaccgacacaccgacatagctaataatttg-aaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 14674250 - 14674322
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||||    
T  14674250 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 31084309 - 31084376
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||||||||||||||||||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  31084309 gacactgacacgccgacacagctaataatttg-aaaaaatcacataattcaatgtaattacaagtgtcg 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 21191134 - 21191062
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||| ||||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  21191134 acacggacactgacatgccgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 21522731 - 21522803
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||||||||||| |||||||| | ||| ||||||| |||||    
T  21522731 acacggacactgacacgccgacacagctaa-taattttaaaaaataacataattcagtgtaattacaattgtcg 21522803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 21533297 - 21533369
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||||||||||| |||||||| | ||| ||||||| |||||    
T  21533297 acacggacactgacacgccgacacagctaa-taattttaaaaaataacataattcagtgtaattacaattgtcg 21533369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 39698524 - 39698593
Alignment:
Q  7 acggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||||| ||||||| |||||||||||| ||||  |||||||||||||||| | ||| ||||||||||||    
T  39698524 acggacactgacacgctgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtc 39698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 19579679 - 19579754
Alignment:
Q  2 acaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||||||||| || |||||||||||||||| || ||| | |||||||||||||| | ||  |||||||||||||    
T  19579679 acaacacggacactgatacgccgacacagctaa-taatttgagaaaatcacataatttagtgcaattacaagtgtcg 19579754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 6247609 - 6247675
Alignment:
Q  11 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||| |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  6247609 acactgacacgccgacacatctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 15883982 - 15884041
Alignment:
Q  19 acgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||||||||| ||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  15883982 acgccgacacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcg 15884041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 19552621 - 19552567
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaa 60  Q
    |||||||||| ||||||||||||||| ||| || ||| ||||||||||||||||||    
T  19552621 acacggacactgacacgccgacacagttaa-taatttgaaaaaatcacataattaa 19552567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 8420019 - 8420080
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||| ||||||| ||||  ||||||| |||||||| ||||| |||||||||||||    
T  8420019 gacacgccgacatagctaataatttg-aaaaaataacataattcaatgtaattacaagtgtcg 8420080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 30135305 - 30135367
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||| ||||| ||||  |||||||||||||| | | ||| |||||||||||||    
T  30135305 gacacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcg 30135367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 33178017 - 33178078
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  33178017 gacacgccgacacaactaataattta-aaaaaatcacataatttagtgtaattacaagtgtcg 33178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 17088284 - 17088337
Alignment:
Q  24 gacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||| ||||| ||||  |||||||||||||||| | ||||||||||||||||    
T  17088284 gacacatctaataatttgaaaaaaatcacataatttagtgtgattacaagtgtc 17088337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 21576823 - 21576751
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||| || ||||| ||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  21576823 acacgaacactgatacgccaacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 42893345 - 42893413
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||| ||||| ||||||||||||| || ||| |||||||||||||||  | ||| |||||||||||||    
T  42893345 ggacacggacacaccgacacagctaa-taatttgaaaaaatcacataatccagtgtaattacaagtgtcg 42893413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 30298927 - 30299000
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||||||||||||||| ||||  ||||||| |||||||| | ||| |||||||||||||    
T  30298927 acacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 30327795 - 30327868
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||||||||||||||| ||||  ||||||| |||||||| | ||| |||||||||||||    
T  30327795 acacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 28084513 - 28084574
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||||||||||||||||  ||||  |||||||||||||||| ||||| ||||||||||||    
T  28084513 gacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 49431017 - 49431079
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||||||||| ||||  |||||||||||||||| | ||| |||| ||||||||    
T  49431017 gacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcg 49431079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 12895193 - 12895122
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||||||||||||| || || |||||||||||||    
T  12895193 acacggacac-gacacgccgaaacagctaataatttg-aaaaaatcacataattcaaagtaattacaagtgtcg 12895122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 23293064 - 23292992
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||  ||||||||||||||||||| || ||| |||||||||||||||| | | | |||||||||||||    
T  23293064 acacggacaatgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtataattacaagtgtcg 23292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 31800556 - 31800484
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||| ||||| |||||||||||||| ||||| ||||||| | |||||| ||||| |||||||||||||    
T  31800556 acacgaacaccgacacaccgacacagctaataatttt-aaaaaattaaataatttaatgtaattacaagtgtcg 31800484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 5414250 - 5414203
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcaca 53  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  5414250 acacggacacggacacgccgacacagctaatt-tttttagaaaatcaca 5414203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 12708132 - 12708200
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| ||||||| |||||| ||||| ||||||||||||| | |||||| | ||| |||||||||||||    
T  12708132 gacactgacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtgtcg 12708200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 715674 - 715615
Alignment:
Q  17 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||| |||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  715674 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 753000 - 752941
Alignment:
Q  17 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||| |||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  753000 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 21945484 - 21945556
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||| ||||| |||| |||||||||||||| || ||| ||||||| |||||||| | ||| |||||||||||||    
T  21945484 acacagacactgacatgccgacacagctaa-taatttgaaaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35158067 - 35157991
Alignment:
Q  1 cacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||| ||||||||||| || |||| || |||  ||||||||||||||| | ||| |||| ||||||||    
T  35158067 cacaacacggacactgacacgccgacgcaactaa-taatttggaaaaatcacataatttagtgtaattataagtgtcg 35157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 3947844 - 3947773
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||| ||||| |||| |||||||||||||| || ||| |||||||| ||||||| | ||| ||||||||||||    
T  3947844 acacagacacggacatgccgacacagctaa-taatttgaaaaaatcgcataattcagtgtaattacaagtgtc 3947773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 50280867 - 50280933
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtg--attacaagtg 75  Q
    ||||| ||||||||||||||||||| || ||| ||||| |||||||||||| ||||  ||||||||||    
T  50280867 gacacggacacgccgacacagctaa-taatttgaaaaattcacataattaagtgtgtaattacaagtg 50280933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 51792 - 51862
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||    
T  51792 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 27505229 - 27505299
Alignment:
Q  7 acggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| || |||| ||||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||    
T  27505229 acggatacggacaagccgacacagctaataatttttaaaa-atcacataattaagtgtaattacaagtgtcg 27505299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 8587099 - 8587027
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| |||||||||||||| ||| | ||||  |||||||||||||||||| ||| |||||||||||||    
T  8587099 acacggacactgacacgccgacacatctagtaatttg-aaaaaatcacataattaagtgtaattacaagtgtcg 8587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 14747547 - 14747610
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaag 73  Q
    ||||| |||||||||||||||||||| ||||  |||||||||||||||| | ||| ||||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 4987363 - 4987299
Alignment:
Q  11 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||| |||||||||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  4987363 acactgacacgccgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 14209105 - 14209165
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| | ||| ||||||||||||    
T  14209105 gacacgccgacacaactaataatttt-aaaaaatcacataattcagtgtaattacaagtgtc 14209165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 28917982 - 28918054
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||| || |||||||||||| ||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  28917982 acacggaaactgacacgccgacatagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 55401056 - 55401128
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| || ||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  55401056 acacggacactgatacgccgacacaactaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 55401128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 10268560 - 10268493
Alignment:
Q  9 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||| ||||||||||||||| |||| ||||  |||||||||||||||| | ||| ||||||||||||    
T  10268560 ggacactgacacgccgacacagttaataatttg-aaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 35222924 - 35222991
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||||||||| ||||  ||||||| |||||||||||||| ||||| |||| | ||||||    
T  35222924 gacacagacacgccgacacaactaac-atttttagaaaatcacataattcaatgtaattatatgtgtcg 35222991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 14832081 - 14832151
Alignment:
Q  6 cacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||| || |||||||||| ||||||||| ||||  |||||||||||||| | ||||| ||||||||||||    
T  14832081 cacggatacggacacgccgatacagctaataatttg-aaaaaatcacataactcaatgtaattacaagtgtc 14832151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 35994804 - 35994740
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgtc 82  Q
    |||| ||||||||||||||| ||||   ||||||||||||||| | ||| |||||||||||||||||    
T  35994804 gacaagccgacacagctaataatttg--aaaaatcacataattcagtgtaattacaagtgtcgtgtc 35994740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 14829671 - 14829742
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||| ||||| |||||||||||||||||||| |  ||| ||||||||||||||| |  || |||||||||||||    
T  14829671 acacagacactgacacgccgacacagctaataa--tttgaaaaatcacataattcatggtaattacaagtgtcg 14829742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 26508102 - 26508163
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||| |||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  26508102 gacacgctgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 10954933 - 10955005
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| |||| |||||||||||||| |||| || ||| |||||||||||||||| | ||| || ||||||||||    
T  10954933 acacgaacactgacacgccgacacaactaa-taatttgaaaaaatcacataattcagtgtaatcacaagtgtcg 10955005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 14216873 - 14216944
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||||||| |||||| ||||||| ||||| ||||| |||| |||| |||||| | ||| ||||||||||||    
T  14216873 acacggacactgacacgtcgacacaactaataatttt-aaaatatcatataattcagtgtaattacaagtgtc 14216944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 14223002 - 14223073
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||||||| |||||| ||||||| ||||| ||||| |||| |||| |||||| | ||| ||||||||||||    
T  14223002 acacggacactgacacgtcgacacaactaataatttt-aaaatatcatataattcagtgtaattacaagtgtc 14223073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 21305238 - 21305290
Alignment:
Q  17 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgatta 69  Q
    ||||||||||||  ||||| ||||  |||||||||||||||||||||| ||||    
T  21305238 acacgccgacacctctaataatttgaaaaaaatcacataattaaatgtaatta 21305290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 21479104 - 21479171
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||| ||||||||||||||||||| || ||| ||||||||||| |||| | ||| ||||| |||||||    
T  21479104 gacactgacacgccgacacagctaa-taatttgaaaaaatcacacaattcagtgtaattactagtgtcg 21479171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 40052318 - 40052365
Alignment:
Q  10 gacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    ||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaa-taatttgaaaaaatcacataatt 40052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 20153 - 20224
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 77  Q
    |||||||||  ||||||||||||||||||| || ||| |||||||||||||||| | ||| ||||||||||||    
T  20153 acacggacaatgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25481879 - 25481953
Alignment:
Q  1 cacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    ||||||| |||||  ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||    
T  25481879 cacaacatggacaatgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 13770672 - 13770745
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgt 79  Q
    |||||||||| || |||||||||||||||| || ||| ||||||| |||||||| | ||| ||||||||||||||    
T  13770672 acacggacactgatacgccgacacagctaa-taatttaaaaaaattacataattcagtgtaattacaagtgtcgt 13770745  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 24339634 - 24339695
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  24339634 gacacgccgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 24339695  T

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Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11061154 - 11061082
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||| ||||||||||||| || ||| |||||||||||||||| | | | |||||||||||||    
T  11061154 acacggacactgacacaccgacacagctaa-taatttgaaaaaatcacataatttagtataattacaagtgtcg 11061082  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 18213112 - 18213059
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||||||| || ||||||||||| |||||| |||||| ||||||||||||||    
T  18213112 acacggacactgatacgccgacacaactaattttttttagaaaatcacataatt 18213059  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 7438693 - 7438759
Alignment:
Q  11 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||| |||| |||||||||| |||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  7438693 acactgacatgccgacacagttaataatttg-aaaaaatcacataattcaatgtaattacaagtgtcg 7438759  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 7197364 - 7197303
Alignment:
Q  16 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||||||||||||||| || ||| |||||||||  ||||| ||||| |||||||||||||    
T  7197364 gacacgccgacacagctaa-taatttaaaaaaatcatttaattcaatgtaattacaagtgtcg 7197303  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 24105659 - 24105731
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||  ||| ||| | ||| |||||||||||||    
T  24105659 acacggacactgacacgccgacacagctaa-taatttgaaaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 8779 - 8851
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||| ||||||||||||||||||| || ||| ||||||||| || ||| | ||| |||||||||||||    
T  8779 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcatattatttagtgtaattacaagtgtcg 8851  T

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Target: scaffold0793 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 4950 - 4891
Alignment:
Q  17 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 76  Q
    |||| |||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  4950 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45613 - 45536
Alignment:
Q  1 cacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||||||| |||||| |||||||  ||||||| |  ||||||  |||||||| | ||| |||||||||||||    
T  45613 cacaacacggacactgacacgtcgacacaattaattatctaaaaaaaaatacataattcagtgtaattacaagtgtcg 45536  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 33433 - 33366
Alignment:
Q  13 acagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgtc 82  Q
    |||||||||||||||||||||| || ||| ||||||| |||||||| | ||| ||||||| |||||||||    
T  33433 acagacacgccgacacagctaa-taatttgaaaaaataacataattcagtgtaattacaa-tgtcgtgtc 33366  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 46663 - 46735
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||  ||||||||||||||| ||| || ||| |||||||||||||||| | ||| ||||||| |||||    
T  46663 acacggacaatgacacgccgacacagttaa-taatttgaaaaaatcacataattcagtgtaattacaaatgtcg 46735  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 130463 - 130535
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    |||||||||  |||| |||||||||| |||| | ||| |||||||||||||||| | ||| |||||||||||||    
T  130463 acacggacaatgacaagccgacacagttaat-agtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 178897 - 178825
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatca-cataattaaatgtgattacaagtgtc 77  Q
    |||||||||| |||||||||||||| |||| || ||| ||||||||| ||||||| | ||| ||||||||||||    
T  178897 acacggacactgacacgccgacacaactaa-taatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 241575 - 241627
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 58  Q
    |||||||||| ||||||||||||||||||| || |||  |||||||||||||||    
T  241575 acacggacactgacacgccgacacagctaa-taatttggaaaaatcacataatt 241627  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 539 - 468
Alignment:
Q  6 cacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 78  Q
    ||||||||| || |||||||||| |||||| ||||  ||||||||||| |||| | ||| |||||||||||||    
T  539 cacggacactgatacgccgacactgctaataatttg-aaaaaatcacaaaattcagtgtaattacaagtgtcg 468  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 225346 - 225271
Alignment:
Q  5 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgt 81  Q
    |||||||||| ||||||||||||||| ||| || ||| | ||||| |||||||  ||||| |||| |||||||||||    
T  225346 acacggacactgacacgccgacacagataa-taatttgagaaaatgacataatacaatgtaattataagtgtcgtgt 225271  T

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