View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10982_low_35 (Length: 234)
Name: NF10982_low_35
Description: NF10982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10982_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 33160003 - 33160221
Alignment:
| Q |
1 |
aaggaggaatcctgatataaaacctccaatgcttgaaaaattgtctacataaggcagaaaaccaaggaggaagttgcacacaaagataaagacgaatgat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
33160003 |
aaggaggaatcctgatataaaacctccaatgcttgaaaaattgtctacataaggcagaaaaccaaggaggaagttgcacacaaagataaagacgaaagat |
33160102 |
T |
|
| Q |
101 |
gctacttctgaaatctgcattccaccaaagaaataattgatcaaaaatcaatcatgcctaacaatgagaaacagctatgaggtgaaaaactaagaagcac |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33160103 |
gctacttctgaaatctgcattccaccaaagaaaaaattgatcaaaaatcaatcatgcctaacaatgagaaacagctatgaggtgaaaaactaagaagcac |
33160202 |
T |
|
| Q |
201 |
ctttttggtatgatatttc |
219 |
Q |
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||||||||||||||||||| |
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| T |
33160203 |
ctttttggtatgatatttc |
33160221 |
T |
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