View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10982_low_9 (Length: 485)
Name: NF10982_low_9
Description: NF10982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10982_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 417; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 1 - 468
Target Start/End: Original strand, 42894447 - 42894915
Alignment:
| Q |
1 |
aagaagtggagcgtaaatagcactattttaatcaatagtnnnnnnnntata-tgtactgtgaaatttaagaatattaggggggtttcagtgtagtagggt |
99 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42894447 |
aagaagtggagcgtaaatagcactattttaatcaatagtaaaaaaaaaaaaatgtactgtgaaatttaagaatattaggggggtttcagtgtagtagggt |
42894546 |
T |
|
| Q |
100 |
tttacatgatgtacccttttagttttcttgttgaaatttaaggtcaaaatcaatcttttagcttatcttgacttccatttctcttttattaatattgctg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42894547 |
tttacatgatgtacccttttagttttcttgttgaaatttaaggtcaaaatcaatcttttagcttatcttgacttccatttctcttttattaatattgctg |
42894646 |
T |
|
| Q |
200 |
ttttatccaatttgttcatgtttgacatcattcaataaaaatagcggcaacaaaagtaacataatattaacatcgaatctacgacgacagtgtgtagatc |
299 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
42894647 |
ttttatccaatttgttcatgtttgacatcattcaataaaaatagcggcaacaaaagtaacataatattaacatcgtatctacgacgacagtgtgtagatc |
42894746 |
T |
|
| Q |
300 |
ctctgaagtactatgaggacagtaaaaacttaaaatggtttgaatgttgaggcccacataaccaatgtttacaccatactacactgaaatgaactcatgc |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42894747 |
ctctgaagtactatgaggacagtaaaaacttaaaatggtttgaatgttaaggcccacataaccaatgtttacaccatactacactgaaatgaactcatgc |
42894846 |
T |
|
| Q |
400 |
gaggtaaaattacacatgtgcatgttgttgtatccaagccaagaaatatcatcaattcatgtgcgtttt |
468 |
Q |
| |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
42894847 |
gaggtaaaattacacatgtgcatgtcgttgtatccaagccaagaaatatcatcaattcatgtgcgtttt |
42894915 |
T |
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