View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10984_low_2 (Length: 356)
Name: NF10984_low_2
Description: NF10984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10984_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 4173218 - 4173550
Alignment:
| Q |
17 |
aattgaacatttaagaaaaagttatattaaaaacaaattaaagtgttgttgatcaaatcaacatatcctatgatttaagaactacaaattgnnnnnnntt |
116 |
Q |
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| T |
4173218 |
aattgaacatttaagaaaaagttatattaaaaacaaattaaagtgttgttgatcaaatcaacatatcctatgatttaagaactacaaattgaaaaaaatt |
4173317 |
T |
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| Q |
117 |
cactagcatctactaatatcttaataaaattgcatactacactttttaatttaaaaattagctactaacatccattgattagcatttgccaacaaatgaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
4173318 |
cactagcatctactaatatcttaataaaattgcatactacactttttaatttaaaaattagctactaacattcattgattagcatttgccaacaaatgaa |
4173417 |
T |
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| Q |
217 |
cactatcaatcatagttgtgctaatattatatgactcatatctaatctgatatatgtggcctctctctttctgttagggtaaggtatccaaggcgttctc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4173418 |
cactatcaatcatagttgtgctaatattatatgactcatatctaatctgatatatgtggcctctctctttctgttagggtaaggtatccaaggcgttctc |
4173517 |
T |
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| Q |
317 |
tgtctctccttttacttttgtctttcctctgtg |
349 |
Q |
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|||||||||||||||||||||||||||| |||| |
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| T |
4173518 |
tgtctctccttttacttttgtctttcctttgtg |
4173550 |
T |
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