View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10984_low_4 (Length: 315)
Name: NF10984_low_4
Description: NF10984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10984_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 29296138 - 29296436
Alignment:
| Q |
1 |
ttggatcggagaatctttgtgacgtgtggttgaagttcgaagttgttgatgagtgatttcttttgggattgtttaatgcgtcttcttttgtgtggccttt |
100 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
29296138 |
ttggatcggagaatctttgtgacatgtggttgaagttcgaagttgttgatgagtgatttcttttgggattgtttaatgcgtcttcttttgtgtggtcttt |
29296237 |
T |
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| Q |
101 |
cttctaagaagtcgcgtgttggtggtagtagttccgatgggaatggattacggagggaggcttgtggcggannnnnnnnnnnnnnnnnnnnnnnnnaaga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
29296238 |
cttctaagaagtcgcgtgttggtggtagtagttccgatgggaatggattacggagggaggcttgtggcggaggtggtggcggtggtggtggtggtgaaga |
29296337 |
T |
|
| Q |
201 |
aggtggcgaaatggagttggaggttgaagccattgttgagagggttttcgaacttcgaagtttgagcgcggttttttgagggaaaaataactgtcaatt |
299 |
Q |
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||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
29296338 |
aggtggcgagatggagttggaggttgaagccatggttgagagggttttcgaacttcgaagtttgagcgcggtgttttgagggaaaaataactgtcaatt |
29296436 |
T |
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