View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10987_high_5 (Length: 267)
Name: NF10987_high_5
Description: NF10987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10987_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 37058164 - 37058399
Alignment:
| Q |
7 |
cccatgacgtgttgaagcttcaaatgatatataattgaggtccgacattaacaaagaatattgcaagtgttgacagagtatatgggacaagaagcaaagg |
106 |
Q |
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| T |
37058164 |
cccatgacgtgttgaagcttcaaatgatatataattgaggtccgacattaacaaagaatattgcaagtgttgacagagtatatgggacaagaagcaaagg |
37058263 |
T |
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| Q |
107 |
ggtgaagagaagaaatagtgagaatcctatgcaaaatatacattgtctgtcggaaatacttttatacccaaaaaatttaatatgcttcatggttttttct |
206 |
Q |
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| T |
37058264 |
ggtgaagagaaaaaatagtgagaatcctatgcaaaatatacattgtctgtcggaaatacttttatacccaaaaattttaatatgcttcatggttttttct |
37058363 |
T |
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| Q |
207 |
acattccccttgatcaattggaaataattaaccttt |
242 |
Q |
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| T |
37058364 |
acattccccttgatgaattggaaataattaaccttt |
37058399 |
T |
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