View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10988_high_5 (Length: 265)

Name: NF10988_high_5
Description: NF10988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10988_high_5
NF10988_high_5
[»] chr1 (91 HSPs)
chr1 (1-237)||(18798454-18798691)
chr1 (1-238)||(46328005-46328263)
chr1 (13-236)||(38536080-38536314)
chr1 (13-236)||(38558298-38558532)
chr1 (1-234)||(29219251-29219493)
chr1 (1-238)||(51701543-51701801)
chr1 (1-238)||(6312537-6312795)
chr1 (1-238)||(29396367-29396625)
chr1 (1-238)||(25612120-25612378)
chr1 (1-237)||(48177442-48177699)
chr1 (1-238)||(15835032-15835290)
chr1 (1-160)||(49230849-49231008)
chr1 (1-235)||(45272550-45272793)
chr1 (1-238)||(5495095-5495333)
chr1 (1-238)||(9322479-9322737)
chr1 (2-161)||(9577509-9577668)
chr1 (1-235)||(28387375-28387630)
chr1 (28-232)||(48668770-48668982)
chr1 (1-95)||(8141271-8141365)
chr1 (10-161)||(19451885-19452036)
chr1 (10-161)||(35279644-35279795)
chr1 (2-161)||(37014717-37014876)
chr1 (28-161)||(21222137-21222270)
chr1 (10-161)||(35679205-35679356)
chr1 (10-161)||(730120-730272)
chr1 (10-161)||(45760086-45760238)
chr1 (10-161)||(50192627-50192779)
chr1 (10-161)||(28824450-28824600)
chr1 (10-161)||(29556076-29556227)
chr1 (10-161)||(45535916-45536067)
chr1 (28-161)||(6304329-6304463)
chr1 (12-161)||(47780685-47780834)
chr1 (13-161)||(49198346-49198493)
chr1 (10-161)||(32589030-32589181)
chr1 (28-161)||(47654428-47654562)
chr1 (18-161)||(49418064-49418207)
chr1 (10-152)||(48524291-48524433)
chr1 (1-76)||(47784392-47784466)
chr1 (10-95)||(953791-953876)
chr1 (1-162)||(33025475-33025637)
chr1 (10-125)||(22183342-22183457)
chr1 (12-162)||(47784361-47784510)
chr1 (18-84)||(15835249-15835315)
chr1 (18-84)||(19452046-19452112)
chr1 (10-82)||(19452006-19452078)
chr1 (20-84)||(25612097-25612161)
chr1 (18-82)||(28824570-28824634)
chr1 (18-82)||(49198466-49198529)
chr1 (10-76)||(21222161-21222227)
chr1 (18-84)||(29219226-29219292)
chr1 (112-162)||(31622535-31622585)
chr1 (112-161)||(955824-955873)
chr1 (19-84)||(18798430-18798495)
chr1 (112-161)||(31572274-31572323)
chr1 (18-82)||(730086-730150)
chr1 (18-82)||(953757-953821)
chr1 (10-66)||(14494181-14494237)
chr1 (18-82)||(35679326-35679390)
chr1 (18-84)||(6312512-6312578)
chr1 (18-84)||(8141324-8141390)
chr1 (20-82)||(14494149-14494211)
chr1 (18-84)||(29396584-29396650)
chr1 (18-84)||(49230824-49230890)
chr1 (22-84)||(51701522-51701584)
chr1 (50-87)||(10896845-10896882)
chr1 (112-161)||(51085869-51085918)
chr1 (51-87)||(1928406-1928442)
chr1 (18-82)||(22183308-22183372)
chr1 (18-82)||(28387591-28387655)
chr1 (18-82)||(35279610-35279674)
chr1 (51-87)||(36402293-36402329)
chr1 (18-82)||(45760208-45760272)
chr1 (27-87)||(48524266-48524326)
chr1 (13-76)||(8141248-8141311)
chr1 (18-84)||(9322696-9322762)
chr1 (162-231)||(9577418-9577488)
chr1 (26-60)||(25831084-25831118)
chr1 (10-60)||(44290102-44290152)
chr1 (18-84)||(46327980-46328046)
chr1 (18-80)||(48177662-48177724)
chr1 (12-82)||(47780642-47780713)
chr1 (162-222)||(47780855-47780916)
chr1 (18-82)||(21222086-21222149)
chr1 (51-87)||(29208801-29208837)
chr1 (22-82)||(29556046-29556106)
chr1 (23-84)||(32589149-32589211)
chr1 (51-87)||(33243312-33243348)
chr1 (51-87)||(33263485-33263521)
chr1 (54-86)||(42657763-42657795)
chr1 (28-80)||(45535892-45535944)
chr1 (18-82)||(50192749-50192813)
[»] chr8 (68 HSPs)
chr8 (1-235)||(31623665-31623900)
chr8 (1-238)||(18305949-18306197)
chr8 (1-236)||(7466305-7466551)
chr8 (1-238)||(32497495-32497743)
chr8 (1-201)||(4031294-4031494)
chr8 (1-235)||(16362166-16362411)
chr8 (1-238)||(14782113-14782371)
chr8 (1-238)||(44725788-44726046)
chr8 (1-237)||(9288436-9288693)
chr8 (1-237)||(42305774-42306021)
chr8 (1-238)||(19717859-19718117)
chr8 (1-238)||(39467446-39467703)
chr8 (1-237)||(18958706-18958963)
chr8 (1-238)||(26856036-26856295)
chr8 (1-235)||(10295360-10295617)
chr8 (1-237)||(4403077-4403334)
chr8 (56-237)||(37857144-37857336)
chr8 (10-162)||(32711357-32711509)
chr8 (18-238)||(43166668-43166909)
chr8 (10-161)||(42938193-42938344)
chr8 (10-152)||(2704904-2705046)
chr8 (28-161)||(26374506-26374639)
chr8 (10-162)||(41479076-41479228)
chr8 (18-161)||(24501889-24502032)
chr8 (28-161)||(10392313-10392446)
chr8 (10-161)||(42937332-42937481)
chr8 (10-161)||(23115245-23115395)
chr8 (10-161)||(42735353-42735504)
chr8 (10-161)||(43959637-43959787)
chr8 (10-151)||(5576706-5576848)
chr8 (1-76)||(43166809-43166884)
chr8 (28-161)||(7506975-7507108)
chr8 (2-95)||(9770959-9771052)
chr8 (22-234)||(39189798-39190028)
chr8 (18-84)||(14782330-14782396)
chr8 (18-84)||(18958922-18958988)
chr8 (18-84)||(44726005-44726071)
chr8 (112-210)||(9770446-9770545)
chr8 (1-80)||(32497453-32497532)
chr8 (18-84)||(7466280-7466346)
chr8 (18-84)||(18306156-18306222)
chr8 (27-84)||(19718076-19718133)
chr8 (18-87)||(32497428-32497497)
chr8 (18-82)||(4031455-4031519)
chr8 (18-82)||(5576818-5576882)
chr8 (18-82)||(23115365-23115429)
chr8 (18-82)||(42735474-42735538)
chr8 (18-82)||(42938314-42938378)
chr8 (18-82)||(43959603-43959667)
chr8 (112-159)||(13478328-13478375)
chr8 (10-76)||(24501932-24501998)
chr8 (10-76)||(26374549-26374615)
chr8 (18-84)||(39467663-39467728)
chr8 (18-84)||(42305980-42306046)
chr8 (112-161)||(8410474-8410523)
chr8 (18-82)||(2705016-2705080)
chr8 (22-82)||(32711479-32711539)
chr8 (18-82)||(41479042-41479106)
chr8 (18-84)||(4403052-4403118)
chr8 (18-76)||(7507018-7507076)
chr8 (22-84)||(16362145-16362207)
chr8 (18-84)||(31623640-31623706)
chr8 (51-84)||(4302813-4302846)
chr8 (112-161)||(4950092-4950141)
chr8 (18-95)||(10295565-10295642)
chr8 (10-82)||(8543502-8543574)
chr8 (51-87)||(37567365-37567401)
chr8 (6-90)||(41069919-41070003)
[»] chr5 (45 HSPs)
chr5 (1-238)||(37013884-37014122)
chr5 (1-238)||(4240440-4240688)
chr5 (1-238)||(1461126-1461374)
chr5 (1-235)||(5949079-5949323)
chr5 (1-238)||(40013690-40013938)
chr5 (1-238)||(1152081-1152339)
chr5 (1-238)||(13925901-13926159)
chr5 (1-238)||(14000083-14000341)
chr5 (1-223)||(22746267-22746502)
chr5 (31-235)||(7947554-7947779)
chr5 (1-161)||(4550333-4550493)
chr5 (10-161)||(21147046-21147197)
chr5 (10-151)||(139252-139393)
chr5 (58-238)||(39852372-39852573)
chr5 (10-161)||(5272995-5273146)
chr5 (18-161)||(7016815-7016958)
chr5 (2-164)||(9220780-9220942)
chr5 (27-161)||(14465303-14465437)
chr5 (12-161)||(32157973-32158123)
chr5 (10-161)||(33656117-33656270)
chr5 (10-161)||(27459026-27459176)
chr5 (6-161)||(6460767-6460922)
chr5 (56-161)||(849172-849277)
chr5 (156-227)||(4550246-4550318)
chr5 (10-82)||(5273116-5273188)
chr5 (18-84)||(4550452-4550518)
chr5 (6-161)||(9689635-9689787)
chr5 (18-84)||(14000300-14000366)
chr5 (18-84)||(37013859-37013925)
chr5 (18-84)||(40013897-40013963)
chr5 (18-82)||(33656240-33656304)
chr5 (20-95)||(16894044-16894119)
chr5 (10-76)||(7016858-7016924)
chr5 (18-82)||(21147012-21147076)
chr5 (20-87)||(5273153-5273220)
chr5 (18-82)||(32158095-32158160)
chr5 (22-84)||(4240647-4240709)
chr5 (22-84)||(5949058-5949120)
chr5 (18-84)||(13925876-13925942)
chr5 (54-87)||(26806578-26806611)
chr5 (18-82)||(139218-139282)
chr5 (20-84)||(1152298-1152362)
chr5 (18-82)||(6460737-6460801)
chr5 (51-87)||(17518474-17518510)
chr5 (18-82)||(27459146-27459210)
[»] chr4 (111 HSPs)
chr4 (1-238)||(49834812-49835050)
chr4 (18-237)||(32683988-32684207)
chr4 (18-238)||(23987200-23987431)
chr4 (1-238)||(30967288-30967536)
chr4 (1-238)||(51320890-51321148)
chr4 (1-238)||(5441373-5441631)
chr4 (1-238)||(27768025-27768283)
chr4 (1-238)||(54341113-54341371)
chr4 (1-237)||(54853448-54853705)
chr4 (8-238)||(37915803-37916054)
chr4 (12-235)||(49501501-49501737)
chr4 (12-235)||(49507566-49507802)
chr4 (1-238)||(37828381-37828639)
chr4 (1-235)||(5799946-5800192)
chr4 (12-234)||(12913204-12913437)
chr4 (1-235)||(32322060-32322315)
chr4 (1-219)||(50018220-50018449)
chr4 (18-231)||(36479228-36479451)
chr4 (1-161)||(29649744-29649904)
chr4 (6-153)||(9163050-9163197)
chr4 (1-238)||(41725094-41725346)
chr4 (56-231)||(28483923-28484108)
chr4 (10-161)||(25331109-25331260)
chr4 (18-161)||(44770930-44771074)
chr4 (10-161)||(55302821-55302972)
chr4 (12-152)||(12112925-12113065)
chr4 (18-161)||(28370910-28371053)
chr4 (10-161)||(28541676-28541827)
chr4 (10-161)||(32950913-32951064)
chr4 (12-161)||(7007354-7007503)
chr4 (10-161)||(37046528-37046680)
chr4 (10-161)||(1112871-1113022)
chr4 (10-161)||(19740985-19741136)
chr4 (10-152)||(22201993-22202135)
chr4 (10-152)||(46635728-46635870)
chr4 (13-161)||(41881159-41881308)
chr4 (10-161)||(25504716-25504867)
chr4 (2-95)||(20021314-20021407)
chr4 (1-162)||(31314808-31314965)
chr4 (10-210)||(40537167-40537373)
chr4 (18-161)||(25446037-25446179)
chr4 (154-238)||(48261269-48261354)
chr4 (13-161)||(1044790-1044936)
chr4 (11-152)||(23464934-23465075)
chr4 (28-161)||(53275835-53275968)
chr4 (10-161)||(39479432-39479585)
chr4 (28-161)||(34228660-34228793)
chr4 (1-84)||(37915754-37915837)
chr4 (10-95)||(24131115-24131200)
chr4 (28-161)||(3436589-3436722)
chr4 (56-152)||(42786708-42786804)
chr4 (10-161)||(30009754-30009905)
chr4 (112-226)||(56445346-56445471)
chr4 (22-154)||(39307337-39307469)
chr4 (154-231)||(8712008-8712086)
chr4 (18-87)||(37915729-37915798)
chr4 (112-161)||(48261207-48261256)
chr4 (19-91)||(11090336-11090408)
chr4 (18-84)||(5441348-5441414)
chr4 (103-161)||(7249842-7249900)
chr4 (1-79)||(29855651-29855728)
chr4 (18-84)||(30967495-30967561)
chr4 (103-161)||(41320881-41320939)
chr4 (155-226)||(24736478-24736550)
chr4 (18-82)||(41881281-41881345)
chr4 (13-84)||(40537341-40537412)
chr4 (10-158)||(41581868-41582016)
chr4 (18-84)||(27768000-27768066)
chr4 (18-84)||(54341088-54341154)
chr4 (18-84)||(54853664-54853730)
chr4 (154-222)||(3436735-3436804)
chr4 (13-82)||(37046650-37046719)
chr4 (13-82)||(39479555-39479624)
chr4 (18-82)||(1044754-1044817)
chr4 (18-82)||(20021288-20021352)
chr4 (18-82)||(24131170-24131234)
chr4 (18-82)||(25331075-25331139)
chr4 (18-82)||(25504837-25504901)
chr4 (18-82)||(28541642-28541706)
chr4 (18-82)||(32951034-32951098)
chr4 (13-84)||(50018190-50018261)
chr4 (20-82)||(19741106-19741168)
chr4 (10-76)||(24131092-24131158)
chr4 (18-84)||(37828598-37828664)
chr4 (13-75)||(39307374-39307436)
chr4 (18-76)||(42786712-42786770)
chr4 (18-84)||(49835009-49835075)
chr4 (12-84)||(7249926-7249998)
chr4 (18-82)||(22201959-22202023)
chr4 (154-230)||(36727937-36728013)
chr4 (51-87)||(40143822-40143858)
chr4 (51-87)||(54509760-54509796)
chr4 (18-84)||(12913167-12913234)
chr4 (10-76)||(7007394-7007460)
chr4 (10-76)||(25446070-25446136)
chr4 (18-80)||(30009877-30009939)
chr4 (42-84)||(41320788-41320830)
chr4 (22-84)||(51320869-51320931)
chr4 (162-222)||(1044957-1045018)
chr4 (20-82)||(7249970-7250033)
chr4 (162-222)||(12113095-12113156)
chr4 (112-161)||(27454155-27454204)
chr4 (54-87)||(28100584-28100617)
chr4 (13-82)||(46635840-46635909)
chr4 (54-87)||(50018189-50018222)
chr4 (18-82)||(23464899-23464963)
chr4 (51-87)||(26336123-26336159)
chr4 (18-82)||(34228781-34228844)
chr4 (10-46)||(41320798-41320834)
chr4 (43-87)||(41762017-41762061)
chr4 (51-87)||(47685190-47685226)
[»] chr3 (112 HSPs)
chr3 (1-238)||(23753386-23753623)
chr3 (18-238)||(10728630-10728861)
chr3 (1-238)||(44906492-44906750)
chr3 (22-238)||(39038030-39038257)
chr3 (1-238)||(50762039-50762287)
chr3 (1-227)||(40897113-40897360)
chr3 (1-238)||(36674109-36674367)
chr3 (18-238)||(17946274-17946515)
chr3 (1-238)||(34484009-34484267)
chr3 (22-235)||(37454851-37455075)
chr3 (1-235)||(11431495-11431750)
chr3 (1-238)||(54628812-54629071)
chr3 (1-237)||(26107230-26107487)
chr3 (1-238)||(48379127-48379384)
chr3 (1-161)||(10660504-10660664)
chr3 (1-161)||(52618042-52618202)
chr3 (5-161)||(51737803-51737960)
chr3 (1-238)||(31646265-31646521)
chr3 (13-238)||(18749593-18749839)
chr3 (22-238)||(32580167-32580403)
chr3 (22-232)||(52810368-52810599)
chr3 (10-234)||(44276367-44276598)
chr3 (1-161)||(50903317-50903480)
chr3 (18-161)||(20832978-20833121)
chr3 (27-161)||(6035130-6035264)
chr3 (1-95)||(18749539-18749633)
chr3 (10-161)||(19253805-19253956)
chr3 (74-236)||(39842475-39842648)
chr3 (10-161)||(3999722-3999873)
chr3 (2-162)||(6975719-6975876)
chr3 (10-161)||(20498187-20498338)
chr3 (10-161)||(996163-996314)
chr3 (10-161)||(10139223-10139374)
chr3 (10-161)||(35337713-35337864)
chr3 (10-161)||(37820554-37820705)
chr3 (10-161)||(33807875-33808027)
chr3 (10-161)||(25418344-25418495)
chr3 (27-161)||(33996618-33996752)
chr3 (37-234)||(15492850-15493061)
chr3 (10-161)||(40246822-40246973)
chr3 (153-230)||(45862982-45863060)
chr3 (10-161)||(51699557-51699707)
chr3 (18-161)||(29029992-29030134)
chr3 (13-161)||(1440029-1440178)
chr3 (12-161)||(29448935-29449084)
chr3 (10-161)||(52114506-52114658)
chr3 (10-161)||(6589542-6589693)
chr3 (13-132)||(12103610-12103729)
chr3 (10-161)||(44762114-44762265)
chr3 (30-161)||(53929205-53929336)
chr3 (10-161)||(54625570-54625721)
chr3 (6-161)||(55235161-55235313)
chr3 (56-161)||(539481-539586)
chr3 (1-73)||(27240408-27240480)
chr3 (10-161)||(3206282-3206424)
chr3 (10-161)||(22057739-22057891)
chr3 (154-238)||(52617950-52618029)
chr3 (112-161)||(5825142-5825191)
chr3 (154-222)||(50903235-50903304)
chr3 (112-164)||(27899424-27899476)
chr3 (10-84)||(6131325-6131399)
chr3 (18-84)||(10660479-10660545)
chr3 (6-76)||(27899360-27899430)
chr3 (18-84)||(36674326-36674392)
chr3 (18-82)||(3206394-3206458)
chr3 (18-82)||(23753584-23753648)
chr3 (1-77)||(44276316-44276392)
chr3 (164-235)||(51737709-51737780)
chr3 (18-84)||(11431470-11431536)
chr3 (18-84)||(18749514-18749580)
chr3 (18-84)||(27240439-27240505)
chr3 (18-84)||(44906709-44906775)
chr3 (18-84)||(50903439-50903505)
chr3 (112-162)||(52080007-52080057)
chr3 (19-84)||(54628788-54628853)
chr3 (18-82)||(1440151-1440214)
chr3 (18-82)||(10139344-10139408)
chr3 (18-82)||(12103574-12103637)
chr3 (18-82)||(19253771-19253835)
chr3 (162-202)||(20833142-20833182)
chr3 (18-82)||(35337679-35337743)
chr3 (18-82)||(37820675-37820739)
chr3 (18-82)||(44762235-44762299)
chr3 (18-84)||(2024151-2024217)
chr3 (18-80)||(6589508-6589570)
chr3 (10-76)||(29030026-29030091)
chr3 (18-84)||(31646480-31646546)
chr3 (22-84)||(50762246-50762308)
chr3 (10-76)||(53929248-53929314)
chr3 (18-82)||(996284-996347)
chr3 (168-231)||(6035039-6035103)
chr3 (18-82)||(20498153-20498217)
chr3 (51-87)||(27593198-27593234)
chr3 (51-87)||(36786017-36786053)
chr3 (18-82)||(40246788-40246852)
chr3 (13-84)||(6131367-6131438)
chr3 (37-84)||(6975712-6975759)
chr3 (192-238)||(10660691-10660738)
chr3 (112-159)||(23535890-23535937)
chr3 (18-68)||(38772321-38772371)
chr3 (22-80)||(54625540-54625598)
chr3 (162-210)||(3206212-3206261)
chr3 (154-210)||(6131240-6131297)
chr3 (54-87)||(10216163-10216196)
chr3 (54-87)||(10225671-10225704)
chr3 (155-196)||(12103733-12103774)
chr3 (27-84)||(44276300-44276357)
chr3 (12-76)||(1440072-1440136)
chr3 (22-82)||(6131411-6131470)
chr3 (51-87)||(39338299-39338335)
chr3 (20-84)||(40897090-40897154)
chr3 (22-82)||(51699677-51699737)
[»] chr2 (73 HSPs)
chr2 (1-238)||(6224548-6224787)
chr2 (1-237)||(28740275-28740522)
chr2 (1-231)||(3574818-3575049)
chr2 (1-238)||(215219-215464)
chr2 (1-238)||(13833413-13833661)
chr2 (1-235)||(28844526-28844781)
chr2 (1-235)||(33135594-33135848)
chr2 (1-191)||(7026575-7026775)
chr2 (1-238)||(3463642-3463891)
chr2 (1-238)||(10657377-10657635)
chr2 (2-234)||(10125285-10125530)
chr2 (27-238)||(25288156-25288388)
chr2 (28-238)||(18177265-18177496)
chr2 (1-238)||(26788755-26789012)
chr2 (18-238)||(378925-379156)
chr2 (10-161)||(16269671-16269822)
chr2 (10-161)||(24776335-24776486)
chr2 (10-161)||(20605216-20605367)
chr2 (10-161)||(31170703-31170854)
chr2 (10-152)||(43847626-43847768)
chr2 (1-153)||(22551850-22552002)
chr2 (10-161)||(44765755-44765906)
chr2 (13-161)||(12407363-12407511)
chr2 (13-161)||(14198656-14198804)
chr2 (10-161)||(1789422-1789573)
chr2 (10-161)||(5093126-5093277)
chr2 (10-161)||(35317042-35317193)
chr2 (12-152)||(305553-305693)
chr2 (27-161)||(9120123-9120257)
chr2 (10-162)||(26601278-26601430)
chr2 (10-161)||(32125230-32125384)
chr2 (154-235)||(43078707-43078789)
chr2 (10-84)||(20605132-20605206)
chr2 (174-238)||(7027051-7027116)
chr2 (13-84)||(7026545-7026616)
chr2 (18-84)||(26788730-26788796)
chr2 (10-82)||(20605174-20605246)
chr2 (18-82)||(24776301-24776365)
chr2 (18-84)||(215423-215489)
chr2 (22-92)||(13833612-13833682)
chr2 (10-95)||(19145003-19145090)
chr2 (18-84)||(28844501-28844567)
chr2 (1-62)||(378950-379011)
chr2 (18-82)||(12407326-12407390)
chr2 (18-82)||(16269637-16269701)
chr2 (18-82)||(20605098-20605162)
chr2 (120-160)||(43078653-43078693)
chr2 (29-84)||(10125490-10125545)
chr2 (112-159)||(21370631-21370678)
chr2 (20-82)||(5093247-5093309)
chr2 (18-80)||(14198779-14198840)
chr2 (18-84)||(28740481-28740547)
chr2 (18-80)||(32125196-32125258)
chr2 (18-84)||(33135569-33135635)
chr2 (13-82)||(1789383-1789452)
chr2 (51-87)||(11534881-11534917)
chr2 (18-82)||(31170824-31170888)
chr2 (51-87)||(34028935-34028971)
chr2 (18-82)||(35317008-35317072)
chr2 (18-82)||(44765721-44765785)
chr2 (22-84)||(3574797-3574859)
chr2 (8-62)||(8172156-8172210)
chr2 (10-76)||(14198699-14198765)
chr2 (18-84)||(26601398-26601464)
chr2 (18-82)||(305665-305730)
chr2 (162-222)||(12407532-12407593)
chr2 (13-82)||(19144965-19145033)
chr2 (162-222)||(35317214-35317275)
chr2 (55-87)||(7026545-7026577)
chr2 (18-82)||(10657352-10657416)
chr2 (51-87)||(20157759-20157795)
chr2 (18-82)||(22551963-22552027)
chr2 (51-87)||(24193595-24193631)
[»] chr7 (117 HSPs)
chr7 (1-222)||(17001037-17001259)
chr7 (1-238)||(37327891-37328139)
chr7 (1-238)||(44121888-44122136)
chr7 (1-238)||(7993106-7993364)
chr7 (1-238)||(23101262-23101520)
chr7 (1-238)||(29614742-29615000)
chr7 (1-238)||(40460695-40460943)
chr7 (1-238)||(28342311-28342569)
chr7 (1-238)||(39028061-39028309)
chr7 (1-238)||(39784063-39784321)
chr7 (1-238)||(46405419-46405667)
chr7 (18-238)||(509637-509868)
chr7 (7-235)||(3022896-3023145)
chr7 (1-238)||(18838353-18838611)
chr7 (1-238)||(33382601-33382859)
chr7 (13-212)||(47066679-47066880)
chr7 (1-235)||(9882218-9882472)
chr7 (1-238)||(28034783-28035040)
chr7 (2-161)||(19251504-19251663)
chr7 (22-237)||(29585500-29585725)
chr7 (27-201)||(33892276-33892460)
chr7 (2-161)||(12963666-12963825)
chr7 (1-161)||(32883746-32883906)
chr7 (2-231)||(3797052-3797292)
chr7 (1-237)||(12740337-12740593)
chr7 (30-230)||(8675326-8675547)
chr7 (1-159)||(44256844-44257002)
chr7 (2-153)||(10068431-10068583)
chr7 (13-161)||(47914249-47914397)
chr7 (10-161)||(30440776-30440927)
chr7 (10-161)||(43581166-43581317)
chr7 (1-238)||(41827278-41827526)
chr7 (20-159)||(10676498-10676637)
chr7 (10-161)||(12893388-12893539)
chr7 (10-161)||(40996725-40996876)
chr7 (13-161)||(47879151-47879299)
chr7 (10-161)||(973164-973315)
chr7 (10-161)||(44343472-44343623)
chr7 (28-162)||(44623351-44623485)
chr7 (10-161)||(34008992-34009144)
chr7 (1-84)||(48117746-48117829)
chr7 (10-161)||(7719336-7719487)
chr7 (10-161)||(20275339-20275490)
chr7 (10-161)||(34695253-34695404)
chr7 (18-95)||(29893062-29893139)
chr7 (13-161)||(18914811-18914959)
chr7 (10-161)||(31638855-31639006)
chr7 (154-235)||(37972848-37972930)
chr7 (28-162)||(9179871-9180005)
chr7 (50-161)||(7718438-7718549)
chr7 (10-162)||(727492-727645)
chr7 (18-161)||(39219453-39219596)
chr7 (10-154)||(25805665-25805809)
chr7 (154-234)||(43187339-43187420)
chr7 (163-235)||(44256747-44256820)
chr7 (14-77)||(43187545-43187608)
chr7 (18-84)||(19251478-19251544)
chr7 (112-162)||(19810874-19810924)
chr7 (18-84)||(29614959-29615025)
chr7 (18-84)||(34695177-34695243)
chr7 (10-161)||(7113436-7113583)
chr7 (2-95)||(10616914-10617006)
chr7 (112-161)||(43187433-43187482)
chr7 (112-161)||(43679496-43679545)
chr7 (10-82)||(34695211-34695283)
chr7 (18-84)||(12963640-12963706)
chr7 (18-84)||(17001218-17001284)
chr7 (18-80)||(18914934-18914996)
chr7 (18-84)||(23101237-23101303)
chr7 (18-84)||(28342286-28342352)
chr7 (18-84)||(37327866-37327932)
chr7 (18-84)||(39784038-39784104)
chr7 (18-84)||(48117788-48117854)
chr7 (112-161)||(447858-447907)
chr7 (10-161)||(32142993-32143146)
chr7 (18-87)||(41827253-41827322)
chr7 (18-82)||(12893354-12893418)
chr7 (14-82)||(40996846-40996914)
chr7 (18-82)||(43581287-43581351)
chr7 (18-82)||(44343593-44343657)
chr7 (18-82)||(47879114-47879178)
chr7 (18-82)||(47914212-47914276)
chr7 (10-76)||(7718481-7718547)
chr7 (18-84)||(7993081-7993147)
chr7 (18-84)||(9882431-9882497)
chr7 (18-84)||(10068405-10068471)
chr7 (10-76)||(18914854-18914920)
chr7 (20-82)||(30440744-30440806)
chr7 (123-161)||(37972943-37972981)
chr7 (18-84)||(39028036-39028102)
chr7 (28-84)||(8078393-8078450)
chr7 (18-82)||(973130-973194)
chr7 (28-92)||(1470377-1470441)
chr7 (18-82)||(20275460-20275524)
chr7 (51-87)||(40097140-40097176)
chr7 (10-62)||(43187518-43187570)
chr7 (13-76)||(509674-509737)
chr7 (18-77)||(32143121-32143180)
chr7 (27-82)||(34008967-34009022)
chr7 (18-80)||(727458-727520)
chr7 (10-72)||(9179895-9179957)
chr7 (204-238)||(29893173-29893207)
chr7 (18-80)||(31638821-31638883)
chr7 (18-84)||(33382576-33382642)
chr7 (18-84)||(46405626-46405692)
chr7 (162-210)||(973336-973385)
chr7 (27-84)||(3797252-3797309)
chr7 (27-92)||(7113411-7113476)
chr7 (13-82)||(8078336-8078405)
chr7 (19-84)||(18838329-18838394)
chr7 (154-183)||(32883919-32883948)
chr7 (194-238)||(32883944-32883989)
chr7 (162-222)||(47879320-47879381)
chr7 (162-222)||(47914418-47914479)
chr7 (202-238)||(33892225-33892261)
chr7 (51-87)||(39301247-39301283)
chr7 (27-87)||(44256958-44257018)
[»] chr6 (34 HSPs)
chr6 (1-238)||(30385047-30385293)
chr6 (1-238)||(31895665-31895923)
chr6 (1-237)||(14262412-14262669)
chr6 (1-238)||(34759028-34759287)
chr6 (1-161)||(34773378-34773538)
chr6 (2-161)||(7051815-7051974)
chr6 (27-238)||(7497071-7497302)
chr6 (10-161)||(6197554-6197705)
chr6 (112-238)||(31067573-31067710)
chr6 (10-161)||(2300814-2300965)
chr6 (123-238)||(4200415-4200541)
chr6 (10-161)||(28002643-28002794)
chr6 (10-161)||(1391602-1391753)
chr6 (18-161)||(29076584-29076728)
chr6 (18-161)||(29111557-29111702)
chr6 (2-162)||(3848183-3848340)
chr6 (28-132)||(656962-657065)
chr6 (18-84)||(31895640-31895706)
chr6 (18-84)||(34773353-34773419)
chr6 (163-210)||(34773560-34773608)
chr6 (3-76)||(7497089-7497162)
chr6 (18-82)||(1391568-1391632)
chr6 (18-82)||(2300935-2300999)
chr6 (2-87)||(3848134-3848225)
chr6 (10-74)||(656985-657049)
chr6 (18-82)||(6197675-6197739)
chr6 (51-87)||(10644016-10644052)
chr6 (20-84)||(14262628-14262692)
chr6 (51-87)||(30877898-30877934)
chr6 (20-87)||(28002611-28002678)
chr6 (18-80)||(3848108-3848170)
chr6 (18-82)||(7051789-7051853)
chr6 (18-82)||(29076542-29076606)
chr6 (18-82)||(29111515-29111579)
[»] scaffold0306 (1 HSPs)
scaffold0306 (18-238)||(13869-14100)
[»] scaffold0152 (2 HSPs)
scaffold0152 (18-238)||(21227-21458)
scaffold0152 (153-238)||(28483-28570)
[»] scaffold0543 (2 HSPs)
scaffold0543 (1-238)||(10530-10788)
scaffold0543 (18-84)||(10505-10571)
[»] scaffold0110 (2 HSPs)
scaffold0110 (1-238)||(39596-39854)
scaffold0110 (18-84)||(39813-39879)
[»] scaffold0922 (3 HSPs)
scaffold0922 (1-161)||(4170-4330)
scaffold0922 (18-84)||(4145-4211)
scaffold0922 (50-87)||(4135-4172)
[»] scaffold1504 (2 HSPs)
scaffold1504 (1-238)||(833-1088)
scaffold1504 (20-84)||(810-874)
[»] scaffold0400 (2 HSPs)
scaffold0400 (10-161)||(15110-15261)
scaffold0400 (20-82)||(15231-15293)
[»] scaffold0365 (2 HSPs)
scaffold0365 (10-161)||(15753-15904)
scaffold0365 (20-82)||(15874-15936)
[»] scaffold0113 (1 HSPs)
scaffold0113 (18-161)||(38972-39115)
[»] scaffold0037 (2 HSPs)
scaffold0037 (10-152)||(100190-100332)
scaffold0037 (162-210)||(100362-100411)
[»] scaffold0347 (1 HSPs)
scaffold0347 (154-238)||(14903-14988)
[»] scaffold0042 (1 HSPs)
scaffold0042 (18-238)||(58055-58296)
[»] scaffold0010 (5 HSPs)
scaffold0010 (1-95)||(233707-233801)
scaffold0010 (1-95)||(234555-234649)
scaffold0010 (1-95)||(222539-222633)
scaffold0010 (21-84)||(233685-233748)
scaffold0010 (21-84)||(234533-234596)
[»] scaffold0004 (1 HSPs)
scaffold0004 (10-161)||(102072-102225)
[»] scaffold0276 (2 HSPs)
scaffold0276 (10-152)||(625-767)
scaffold0276 (18-82)||(737-801)
[»] scaffold0839 (1 HSPs)
scaffold0839 (154-238)||(3671-3756)
[»] scaffold0054 (3 HSPs)
scaffold0054 (154-235)||(36892-36971)
scaffold0054 (18-76)||(37027-37085)
scaffold0054 (112-161)||(36984-37033)
[»] scaffold0151 (3 HSPs)
scaffold0151 (56-150)||(38692-38786)
scaffold0151 (18-76)||(38724-38782)
scaffold0151 (154-210)||(38612-38669)
[»] scaffold0651 (1 HSPs)
scaffold0651 (1-62)||(8732-8793)
[»] scaffold0007 (1 HSPs)
scaffold0007 (112-161)||(199906-199955)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18798454 - 18798691
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  18798454 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 18798553  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 200  Q
      ||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18798554 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 18798653  T
Q  201 t-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    | |||||||| || ||||||||| ||||||||||||||    
T  18798654 tgagatttctagagattgtttttgttttaaaagttact 18798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 46328005 - 46328263
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  46328005 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaa 46328104  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||| ||||                    |||||||||||||||||||||||||||    
T  46328105 aagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 46328204  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||    
T  46328205 aaaagtctttcataaaaagataagatttctcgaaattgtttttcttttaaaagttacta 46328263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 38536314 - 38536080
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||       ||||  || |    
T  38536314 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggt 38536215  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat- 201  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||     
T  38536214 attcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 38536115  T
Q  202 agatttcttgaaattgtttttcttttaaaagttac 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  38536114 agatttcttgagattgtttttcttttaaaagttac 38536080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 38558532 - 38558298
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||       ||||  || |    
T  38558532 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggt 38558433  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat- 201  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||     
T  38558432 attcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 38558333  T
Q  202 agatttcttgaaattgtttttcttttaaaagttac 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  38558332 agatttcttgagattgtttttcttttaaaagttac 38558298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 29219251 - 29219493
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||         
T  29219251 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaa 29219348  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||||||||||||  |||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||    
T  29219349 aagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtattt 29219448  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagtt 234  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  29219449 catgaaaagatgagatttcttgagattgtttttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 51701543 - 51701801
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  51701543 ttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 51701642  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  51701643 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 51701742  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| |||||| |||| ||||||||| |||||||||||||||    
T  51701743 aaaagtctttcatgaaaagatgagattttttgagattgtttttattttaaaagttacta 51701801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 6312537 - 6312795
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  6312537 ttttgcaatttaaaaaaagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 6312636  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  6312637 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 6312736  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  6312737 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 6312795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 29396625 - 29396367
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| | |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  29396625 ttttgcaatttaaaaaaaatcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 29396526  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  29396525 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 29396426  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  29396425 aaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttacta 29396367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 25612120 - 25612378
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||         
T  25612120 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaa 25612219  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||||||||||||||| |||||||||||||||||||                    |||||||||||| ||||||||||||||    
T  25612220 aagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaaga 25612319  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  25612320 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 25612378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 48177699 - 48177442
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||         
T  48177699 ttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaa 48177600  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||| ||||||||||||||||                    |||||||||||||||||||||||||||    
T  48177599 aagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 48177500  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  48177499 aaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagatact 48177442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 15835290 - 15835032
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||         
T  15835290 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaa 15835191  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
       |||  || |||||||||||||||||||| | |||||||||||||||||||                    |||||||||||||||||||||||||||    
T  15835190 aaatcttgtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaaga 15835091  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  15835090 aaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttacta 15835032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 49230849 - 49231008
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  49230849 ttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 49230948  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 160  Q
      ||||  || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49230949 aagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 45272550 - 45272793
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         
T  45272550 ttttgcaacttaaaaaaaatcttgttgtattcaatcaaaactctttgtcatttt-aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 45272648  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattg----------gattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
       |||  || |||||||||| ||| ||||||||||||| ||||||||||||||          |||||||||||||||||||||||||||||| |||||    
T  45272649 aaatctcgtggtattcaaaattatttaaatttcgaagga-tgtttaataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttt 45272747  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
     || ||||||| |||||| |||| ||||||||||||||||||||||    
T  45272748 tataaaaagatgagattttttgagattgtttttcttttaaaagtta 45272793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 5495333 - 5495095
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||||||||||||   |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  5495333 ttttgcaacttaaaggaagtcttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 5495234  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || |||||||||||||| ||||||| ||||||| |||||||||||          |||||||||||||||||||||||||||||||||| ||    
T  5495233 aagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctt 5495134  T
Q  191 catgaaaagatagatttcttgaaattgtttttcttttaaaagttacta 238  Q
     |||||||||         ||| |||||||||||||||||||||||||    
T  5495133 tatgaaaaga---------tgagattgtttttcttttaaaagttacta 5495095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 9322737 - 9322479
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |   |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||         
T  9322737 ttttgcaatttaaaaaaaaatttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaa 9322638  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattg--------------------gattttgtagtgtaattttaacaaga 180  Q
      |||   || ||||||||||||||||||||| |||||||||||||||||||||                    ||||||||||||||||||||||||||    
T  9322637 aagtcctgtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaaga 9322538  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||    
T  9322537 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaatttacta 9322479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 9577668 - 9577509
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||| |||||| |||||||          
T  9577668 tttgcaacttaaaaaaagtattgttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaa 9577569  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9577568 agtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttg 9577509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28387630 - 28387375
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  28387630 ttttgcaatttaaaaaaagtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 28387531  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
       |||  || |||||||| |||||||||||||||||||||||||||||||||                    |||||||||||| |||||||||||| |    
T  28387530 aaatcttgtggtattcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaa 28387431  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  28387430 aaaagtctttcataaaaagatgagatttcttgagattgtttttgttttaaaagtta 28387375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 232
Target Start/End: Complemental strand, 48668982 - 48668770
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    ||||||||||||       |||   || |||||||||| |||||    
T  48668982 tattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaattattca 48668886  T
Q  128 aatttcgaaggattgtttaataaattggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaatt 216  Q
    ||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||| |||||| |||  |||    
T  48668885 aatttcgaaagattgtttaataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttgggatt 48668786  T
Q  217 gtttttcttttaaaag 232  Q
    ||||||||||||||||    
T  48668785 gtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8141365 - 8141271
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8141365 ttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcactt 8141271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 19452036 - 19451885
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||| || |||||||       ||||| |    
T  19452036 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagt 19451937  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  19451936 ggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttg 19451885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 35279644 - 35279795
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| || |||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  35279644 ttaaaaaaagacttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagt 35279743  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  35279744 ggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg 35279795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 37014876 - 37014717
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    ||||||| |||||||||||||||| ||||||||| |||||||||||||||||  || |||||||| ||||||||||||| | | ||||||||||          
T  37014876 tttgcaatttaaaaagagtcttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaa 37014777  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     ||||  ||||||||||||||||||||||||| || |||||||| |||||||| ||||||    
T  37014776 agtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaattttg 37014717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 21222137 - 21222270
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       |||||  | ||||||||||||||||    
T  21222137 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattca 21222236  T
Q  128 aatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||  |||||||    
T  21222237 aatttcgaaggattgtttaataaataagattttg 21222270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 35679356 - 35679205
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| |||||||| |||||||||||||| |||||||||||| |||||| |||||  |||||||||||||||| || |||||||       |||   |    
T  35679356 ttaaaaaaagtcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgt 35679257  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35679256 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 35679205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 730120 - 730272
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctat 108  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||        |||||     
T  730120 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctag 730219  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    || |||||||||||||||||||||||| | ||||||||||||||  |||||||    
T  730220 tggtattcaaaatcattcaaatttcgacgaattgtttaataaatcagattttg 730272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 45760238 - 45760086
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctat 108  Q
    ||||||| ||||||||  ||||||||||||| ||||||||| ||||||||| ||| || ||||||||||||||||| || |||||||       |||||     
T  45760238 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag 45760139  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    || |||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  45760138 tggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttg 45760086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 50192779 - 50192627
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctat 108  Q
    ||||||| | ||||||  ||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| || |||||||        |||||     
T  50192779 ttaaaaaaaatcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctag 50192680  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    || ||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  50192679 tggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttg 50192627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 28824600 - 28824450
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||  |    
T  28824600 ttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgt 28824501  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  28824500 ggtattcaaaatcattcaaatttcgaa-gattgtttaataaatcagattttg 28824450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 29556076 - 29556227
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  |||||||| |||| || |||| |||| |||||||||||| | ||||||||||||||| || |||||||        |||| |    
T  29556076 ttaaaaaaagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagt 29556175  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  29556176 gttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttg 29556227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 45535916 - 45536067
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||| | |||||||||||| || ||||| ||| ||||||||||||||||| || ||| |||       ||||| |    
T  45535916 ttaaaaaaagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagt 45536015  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  45536016 ggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttg 45536067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 6304463 - 6304329
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcacttnnnnnnngtctattgatattcaaaatcattc 126  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||||| ||| | || || |||||||       ||||| || |||||||||||||||    
T  6304463 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattc 6304364  T
Q  127 aaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||||||  |||||||    
T  6304363 aaatttcgaaggattgtttaataaatcagattttg 6304329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 47780685 - 47780834
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| ||||||||  ||||||||||||| | | |||||||| ||||||||| || ||||||||||||||||| || |||||||       ||||| |||    
T  47780685 aaaaaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtga 47780784  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||| ||  ||||||||||||||||||  |||||||    
T  47780785 tattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttg 47780834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 49198493 - 49198346
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| ||||||||  ||||||||||||| |||||||||||| |||||||| ||| |||||||||| |||||| || |||||||       ||  | || |    
T  49198493 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggt 49198395  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  49198394 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 49198346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 32589181 - 32589030
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| | |||| | |||||||||||||||||||| |||||  | || | ||||| || |||||||||||||| ||||||||||       ||||  |    
T  32589181 ttaaaaaaaatcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgt 32589082  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  32589081 ggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttg 32589030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 47654562 - 47654428
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctattgatattcaaaatcattc 126  Q
    ||||||||||||| |||||||||||| ||| |||||||| ||||||||||||| ||| || |||||||        ||||| || |||||||||| ||||    
T  47654562 tattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattc 47654463  T
Q  127 aaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||||||  |||||||    
T  47654462 aaatttcgaaggattgtttaataaatcagattttg 47654428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 49418064 - 49418207
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    ||||||||  ||||||||||||| || ||||||||| |||||| |  || |||||||||| |||||| || |||||||       ||||| || ||||||    
T  49418064 agtcttgtgttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattca 49418163  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  49418164 aaatcattcaaatttcaaaggattgtttaataaatcagattttg 49418207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 48524291 - 48524433
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| | |||||||||| |||||| || || |||||| |||||| ||| || |||||||       ||||  |    
T  48524291 ttaaaaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgt 48524390  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  48524391 gatattcaaaatcattcaaattttgaaagattgtttaataaat 48524433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47784392 - 47784466
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  47784392 ttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtattcaa 47784466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 953791 - 953876
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||| || |||||||    
T  953791 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33025475 - 33025637
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatc-aagacttttcatcacttnnnn 99  Q
    |||| ||| ||||||| ||| ||||  ||||||||||||| |||||| |||||| ||||| ||||| ||||||||||| || ||| || |||||||        
T  33025475 ttttccaatttaaaaaaagttttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaa 33025574  T
Q  100 nnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
       ||||  || ||||||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  33025575 aaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagattttgt 33025637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 22183342 - 22183457
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || |||||||       ||||| |    
T  22183342 ttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagt 22183441  T
Q  110 gatattcaaaatcatt 125  Q
    | ||||||||||||||    
T  22183442 ggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 47784361 - 47784510
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| ||||||||  ||||||||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||| ||       ||||  ||     
T  47784361 aaaaaaagtcttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtgg 47784459  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
    |||||||||| ||||||| ||| || |||||||||||||||||||||||||    
T  47784460 tattcaaaattattcaaacttctaaagattgtttaataaattggattttgt 47784510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 15835315 - 15835249
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  15835315 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 15835249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 19452112 - 19452046
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| |||||||||||||||||    
T  19452112 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 19452046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 19452078 - 19452006
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||| |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  19452078 ttaaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19452006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 25612097 - 25612161
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  25612097 tcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 25612161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 28824634 - 28824570
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||||||||| | |||| |||||||||||| | |||||||||||||    
T  28824634 agtcttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaaga 28824570  T

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Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 49198529 - 49198466
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||    
T  49198529 agtcttgtggtattcaatcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaaga 49198466  T

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Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 21222161 - 21222227
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| |||||||||||    
T  21222161 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaa 21222227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 29219226 - 29219292
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  29219226 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 29219292  T

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Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 31622585 - 31622535
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||    
T  31622585 tattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttgt 31622535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 955824 - 955873
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  955824 tattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttg 955873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 18798430 - 18798495
Alignment:
Q  19 gtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  18798430 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18798495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 31572323 - 31572274
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  31572323 tattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg 31572274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 730086 - 730150
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  730086 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 730150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 953757 - 953821
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  953757 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 953821  T

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Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 14494181 - 14494237
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttg 66  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| ||||||||||||    
T  14494181 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttg 14494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 35679390 - 35679326
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||| ||||||   |||| |||||||||||| |||||||||||||||    
T  35679390 agtcttgtggtattcaatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaaga 35679326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 6312512 - 6312578
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||| ||| |||||||||| ||||||    
T  6312512 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaattaagact 6312578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 8141390 - 8141324
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||| ||| |||||||||||||||||    
T  8141390 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 8141324  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 14494149 - 14494211
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  14494149 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 14494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 29396650 - 29396584
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||| ||||  |||||||||||||||||    
T  29396650 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttttggtattcaatcaagact 29396584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 49230824 - 49230890
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| ||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  49230824 agtcatgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagact 49230890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 51701522 - 51701584
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||||||||||| ||||  |||| |||| ||||||| |||||||||||||||||    
T  51701522 ttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagact 51701584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  50 attttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||||||||||| |||||||||||||||||||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 51085869 - 51085918
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||| |||||||||| |||||||| || ||||||||||||||||    
T  51085869 tattcaaaataattcaaattttgaaggattattaaataaattggattttg 51085918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 22183308 - 22183372
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||| ||| | |||||||||||||    
T  22183308 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 22183372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 28387655 - 28387591
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| | |||||||||||||||| ||||  |||| |||||||||||  |||||||||||||||    
T  28387655 agtcttatggtattcaatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaaga 28387591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 35279610 - 35279674
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| ||||||| |||| | |||||||||||||    
T  35279610 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagacttgtgttattcaatcaaga 35279674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 45760272 - 45760208
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||| |||||||   |||| |||||||||||| | |||||||||||||    
T  45760272 agtcttgtggtattcaatcaaaactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 45760208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 48524266 - 48524326
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||||||||   |||| |||||||||||| | ||||||||||||| ||||    
T  48524266 gtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 48524326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 8141311 - 8141248
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    |||| |||||||  |||||||||||||||| ||  ||| || ||||||||||||||||||||||    
T  8141311 aaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattcaa 8141248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 9322762 - 9322696
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| ||||||   ||| |||||||||||||||||    
T  9322762 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaaaatttgtggtattcaatcaagact 9322696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 9577488 - 9577418
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaa 231  Q
    ||||| |||||||  | |||||| ||||||||||||| || ||||||||||  ||||||||||||||||||    
T  9577488 tagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttcttgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 25831118 - 25831084
Alignment:
Q  26 tgtattcaatcaagactctttgtcattttaaaaaa 60  Q
    |||||||||||||| ||||||||||||||||||||    
T  25831118 tgtattcaatcaaggctctttgtcattttaaaaaa 25831084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 44290152 - 44290102
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaa 60  Q
    ||||||| ||||||||  |||||||| ||||||||||||||||| ||||||    
T  44290152 ttaaaaaaagtcttgtaatattcaataaagactctttgtcatttaaaaaaa 44290102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 46327980 - 46328046
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||||  ||||||||||| ||| ||||  | || |||||||||||| |||||||||||||||||    
T  46327980 agtcttgtgttattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 46328046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 48177724 - 48177662
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||||||| |||||||||||||||| ||||  | || |||||| ||||| |||||||||||||    
T  48177724 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaa 48177662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 47780642 - 47780713
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcatttt--aaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||| ||||||||  ||||||||||||||||||| ||| |||  |||||||||||| | |||||||||||||    
T  47780642 aaaaaaagtcttgtgttattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaaga 47780713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 47780855 - 47780916
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||| |||||||||| |||||||| ||||||||||| || ||||||||| | |||||||||    
T  47780855 tagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 21222086 - 21222149
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||||||||| ||| |||||||||   ||| | |||||||||||||    
T  21222086 agtcttgtggtattcaatcaagactcttt-tcaatttaaaaaaagtttgtgttattcaatcaaga 21222149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 29208801 - 29208837
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29208801 ttttaaaaatgtctttaggtattcaatcaagactttt 29208837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 29556046 - 29556106
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| ||||||||||||||||||||   |||| |||||||||||| | |||||||| ||||    
T  29556046 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaaga 29556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 32589211 - 32589149
Alignment:
Q  23 tgttgtattcaatcaagactctttgtca--ttttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||||||||||||||||||| |||  ||| |||||| ||||  |||||||||||||||||    
T  32589211 tgttgtattcaatcaagactcttt-tcaactttaaaaaaaatcttctggtattcaatcaagact 32589149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 33243348 - 33243312
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||||||| || |||||||||||||||||||||    
T  33243348 ttttaaaaaagtttttaggtattcaatcaagactttt 33243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 33263521 - 33263485
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||||||| || |||||||||||||||||||||    
T  33263521 ttttaaaaaagtttttaggtattcaatcaagactttt 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 42657763 - 42657795
Alignment:
Q  54 taaaaaagtcttgaggtattcaatcaagacttt 86  Q
    ||||||||||||| |||||||||||||||||||    
T  42657763 taaaaaagtcttgtggtattcaatcaagacttt 42657795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 45535892 - 45535944
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||||||||||||||||||   |||| |||||||||||| | |||||||||||    
T  45535892 tattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaa 45535944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 50192813 - 50192749
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||| |||||   |||| |||||| ||||| | |||||||||||||    
T  50192813 agtcttgtggtattcaatcaagattctttccaatttaaaaaaaatcttgtgttattcaatcaaga 50192749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 31623665 - 31623900
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||| |||||||||| |||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  31623665 ttttgtaacttaaaaaaagtctcttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 31623764  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 200  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31623765 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaaga 31623864  T
Q  201 t-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    | ||||||||||| ||||||||||||||||||||||    
T  31623865 taagatttcttgagattgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 18306197 - 18305949
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  18306197 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 18306098  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||||||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  18306097 aagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 18305998  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  18305997 catgaaaagatgagatttcttgagattgttattcttttaaaagttacta 18305949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 7466305 - 7466551
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||         
T  7466305 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaa 7466404  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||||||||||||| |||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  7466405 aagtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 7466504  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttac 236  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  7466505 catgaaaagatgagatttcttgagattgtttttcttttaaaagttac 7466551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 32497495 - 32497743
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  32497495 ttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 32497594  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||| |||||||||    
T  32497595 aagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagagaaagtcttt 32497694  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  32497695 catgaaaagatgagatttcttgagattgtttttcttttaaaagttacta 32497743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 4031494 - 4031294
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||         
T  4031494 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaa 4031395  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 200  Q
      ||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031394 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 4031295  T
Q  201 t 201  Q
    |    
T  4031294 t 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 16362166 - 16362411
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||| |||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||         
T  16362166 ttttgtaacttaaaaaaaatcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaa 16362265  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| |||||    
T  16362266 aagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttt 16362365  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
     || ||||||| ||||||||||| ||||||||||||||||||||||    
T  16362366 tataaaaagatgagatttcttgagattgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 14782371 - 14782113
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  14782371 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 14782272  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||| ||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  14782271 aagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 14782172  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  14782171 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 14782113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 44726046 - 44725788
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  44726046 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 44725947  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||| ||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  44725946 aagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 44725847  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  44725846 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 44725788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 9288693 - 9288436
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||         
T  9288693 ttttgcaatttaaaaaaagtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaa 9288594  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg--------------------tagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||    
T  9288593 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaaga 9288494  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  9288493 aaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttact 9288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 42306021 - 42305774
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  42306021 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 42305922  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
       |||  || |||||||||| |||||||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||||||| ||    
T  42305921 aaatcttgtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcatt 42305822  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    |||||||| || ||||||||||| ||||||||| |||| |||||||||    
T  42305821 catgaaaaaatgagatttcttgagattgtttttgtttttaaagttact 42305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 19718117 - 19717859
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  19718117 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 19718018  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||||||||||||||||||| |||||||||||||||                    |||||||||||||||||||||||||||    
T  19718017 aagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaaga 19717918  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  19717917 aaaagtcttttatgaaaagatgagatttcttgagattgtttttgttttaaaagttacta 19717859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 39467703 - 39467446
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  39467703 ttttacaacttaaaaa-agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 39467605  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  39467604 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaaga 39467505  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||| |||||||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  39467504 aaaaatctttcatgaaaagatgagattttttgagattgtttttcttttaaaagttacta 39467446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 18958963 - 18958706
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||         
T  18958963 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 18958864  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  18958863 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaaga 18958764  T
Q  181 aaaagtctttcatgaaaaga-tagatttcttgaaattgtttttcttttaaaagttact 237  Q
    |||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||    
T  18958763 aaaagtctttcatgaaaagattagattttttgagattgtttttgttttaaaagttact 18958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 26856036 - 26856295
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtc-ttgaggtattcaatcaagacttttcatcacttnnnn 99  Q
    |||||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  26856036 ttttgcaacttaaaaaaaatattgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaa 26856135  T
Q  100 nnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaag 179  Q
       ||||  || |||||||||||||||||||||||||| |||||||||||||||                    ||||||||||||||||||||||||||    
T  26856136 aaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaag 26856235  T
Q  180 aaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||||||  |||| || ||||||||||| |||||||||||||||||||||||||    
T  26856236 aaaaagtctttcagaaaaaaataagatttcttgagattgtttttcttttaaaagttacta 26856295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 10295617 - 10295360
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||||||||||| || |||||| | | ||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||         
T  10295617 ttttgcaacttaagaaaagtcttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 10295518  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt---------------------ggattttgtagtgtaattttaacaag 179  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                     ||||||||||||||||||||||||||    
T  10295517 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaag 10295418  T
Q  180 aaaaagtctttcatgaaaagat-agatttcttgaaattg-tttttcttttaaaagtta 235  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||||||    
T  10295417 aaaaagtctttcatgaaaagatgagatttcttgagattgtttttttttttaaaagtta 10295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 4403077 - 4403334
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||| |||||| ||||||||| |||| ||||||||||||         
T  4403077 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaa 4403176  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
       |||  || ||||||||||||||||||||||||||||||||||||||||||                    ||||||| |||||||||||||||||||    
T  4403177 aaatctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaaga 4403276  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    |||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||    
T  4403277 aaaagtctttcatgaaaatatgagatttcttgggattgtttttcttttaaaagttact 4403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 37857144 - 37857336
Alignment:
Q  56 aaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattgg 155  Q
    ||||||| |||||||||||||| |||| ||||||||||||       ||||  || |||||||| ||||||||||||  |||||||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  156 a----------ttttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    |          |||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  37857244 attttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttact 37857336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 32711509 - 32711357
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  32711509 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 32711410  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
    | |||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  32711409 ggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgt 32711357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 43166909 - 43166668
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||| ||       ||||  || ||||||    
T  43166909 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattca 43166810  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg--------------------tagtgtaattttaacaagaaaaagtctttcatgaaa 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||                    | ||||||||||||||||||||||| ||||||||||    
T  43166809 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaa 43166710  T
Q  198 agat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||| ||||||||||| |||| ||||||||||||||||||||    
T  43166709 agatgagatttcttgagattggttttcttttaaaagttacta 43166668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 42938344 - 42938193
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  42938344 ttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 42938245  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  42938244 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 42938193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 2705046 - 2704904
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  2705046 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 2704947  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
    | ||||||||||||||||||||||||| |||||||||||||||    
T  2704946 ggtattcaaaatcattcaaatttcgaatgattgtttaataaat 2704904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 26374639 - 26374506
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| || ||||||||||||||||    
T  26374639 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattca 26374540  T
Q  128 aatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||  |||||||    
T  26374539 aatttcgaaggattgtttaataaataagattttg 26374506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 41479076 - 41479228
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  41479076 ttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaat 41479175  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
    | ||||||||||||||||||||||||| |||||||||||||||  ||||||||    
T  41479176 ggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgt 41479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 24502032 - 24501889
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    ||||||||  ||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| || ||||||    
T  24502032 agtcttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 24501933  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  24501932 aaatcattcaaatttcgaaggattgtttaataaatcagattttg 24501889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 10392446 - 10392313
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| |||||||       ||||| || |||||| |||||||||    
T  10392446 tattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattca 10392347  T
Q  128 aatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||  |||||||    
T  10392346 aatttcgaaggattgtttaataaatcagattttg 10392313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 42937332 - 42937481
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| | |||||||||| |||||||||||| |||||||||||  |||| || |||||||       ||||| |    
T  42937332 ttaaaaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagt 42937429  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  42937430 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 42937481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 23115395 - 23115245
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| ||||| |||||| ||||||||||||||||| || |||||||       ||||| |    
T  23115395 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 23115296  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||| ||||||||||||||| |||||||||||||||||||  |||||||    
T  23115295 ggtattc-aaatcattcaaatttggaaggattgtttaataaatcagattttg 23115245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 42735504 - 42735353
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| ||||| |||||| ||||||| |||| |||||||||| |||||| || |||||||       ||||| |    
T  42735504 ttaaaaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagt 42735405  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  42735404 ggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttg 42735353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 43959637 - 43959787
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||||||||||||||||  |||||||||||||| | || |||||||       | ||| |    
T  43959637 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcattttaaaaaagtcttg-tgtattcaatcaagattcttaatcacttcaaaaaagactagt 43959735  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  43959736 ggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 43959787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 5576848 - 5576706
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctat 108  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||        ||| |     
T  5576848 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaag 5576749  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaa 151  Q
    || |||||||||||||||||||||||||| |||||||||||||    
T  5576748 tggtattcaaaatcattcaaatttcgaagaattgtttaataaa 5576706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43166884 - 43166809
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43166884 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaa 43166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 7507108 - 7506975
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||| ||| || ||||||||| | |||||||||| ||||||||||||||||| || |||||||       ||||| || ||||||||| ||||||    
T  7507108 tattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattca 7507009  T
Q  128 aatttcgaaggattgtttaataaattggattttg 161  Q
    ||||| |||||||||||||||||||  |||||||    
T  7507008 aattttgaaggattgtttaataaatcagattttg 7506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 9771052 - 9770959
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    ||||||||||||||| ||| ||||| ||||||||||||| ||||| |||||| |||||||||  |  ||||||||||||||||||| |||||||    
T  9771052 tttgcaacttaaaaaaagttttgttttattcaatcaagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagactttttatcactt 9770959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 234
Target Start/End: Complemental strand, 39190028 - 39189798
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaat 121  Q
    |||| |||||||||||||||||||||  |||| |||||||||||| |||||||||| || ||| || |||| ||       ||||  || ||||||| ||    
T  39190028 ttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacat 39189930  T
Q  122 cattcaaatttcgaaggattgtttaataaattg---------gattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat- 201  Q
    |||||||||||||||||||||||||||||||||         |||||||          ||||  ||||||||||||||||| ||||||||||||| ||     
T  39189929 cattcaaatttcgaaggattgtttaataaattgaatttgatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaacatg 39189831  T
Q  202 agatttcttgaaattgtttttcttttaaaagtt 234  Q
    ||||||||||  |||||||||||||||||||||    
T  39189830 agatttcttgggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 14782396 - 14782330
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  14782396 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 14782330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 18958988 - 18958922
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  18958988 agtcttgtagtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 18958922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 44726071 - 44726005
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  44726071 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 44726005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 9770545 - 9770446
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||||| || || ||||||||||  ||||| | |||||| |||| || |||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttctt 9770446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32497453 - 32497532
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||| ||||||||||| |||||||| |||||||||||||||| ||||  | || |||||| ||||| |||||||||||||    
T  32497453 ttttacaacttaaaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaa 32497532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 7466280 - 7466346
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  7466280 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 7466346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 18306222 - 18306156
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  18306222 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 19718133 - 19718076
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  19718133 gtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 19718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 32497428 - 32497497
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||| |||||||||||||||| |||   | || |||||||||||| ||||||||||||||||||||    
T  32497428 agtcttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4031519 - 4031455
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||| ||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  4031519 agtcttgtggtattcgatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 4031455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 5576882 - 5576818
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  5576882 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 5576818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 23115429 - 23115365
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  23115429 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 23115365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 42735538 - 42735474
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  42735538 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 42735474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 42938378 - 42938314
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  42938378 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 42938314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 43959603 - 43959667
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  43959603 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 43959667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 13478375 - 13478328
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 159  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||    
T  13478375 tattcaaaatcttttaaatttcgaaggattgtttaataaattagattt 13478328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 24501998 - 24501932
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  24501998 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 24501932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 26374615 - 26374549
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  26374615 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 26374549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 39467728 - 39467663
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| |||  ||  |||||||||||||| |||||||||||||||||    
T  39467728 agtcttgtggtattcaatcaagact-ttttacaacttaaaaaagtcttgtggtattcaatcaagact 39467663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 42306046 - 42305980
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||||  ||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  42306046 agtcttgtgatattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 42305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 8410523 - 8410474
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||| ||||    
T  8410523 tattcaaaatcattgaaatttggaaggattgtttactaaattggactttg 8410474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 2705080 - 2705016
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   | || |||||||||||| | |||||||||||||    
T  2705080 agtcttgtggtattcaatcaagactctttccaaattaaaaaaagtcttgtgttattcaatcaaga 2705016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 32711539 - 32711479
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  32711539 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 32711479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 41479042 - 41479106
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||| ||| | |||||||||||||    
T  41479042 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 41479106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 4403052 - 4403118
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| | |||||||||||| ||| ||||  | || |||||||||||| |||||||||||||||||    
T  4403052 agtcttttggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 4403118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 7507076 - 7507018
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  7507076 agtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7507018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 16362145 - 16362207
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||||||||||| ||||| | || |||||| ||||| | |||||||||||||||    
T  16362145 ttgtggtattcaatcaagactttttgtaacttaaaaaaaatcttgtgatattcaatcaagact 16362207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 31623640 - 31623706
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| | |||||||||||||| ||||| | || ||||||||||   |||||||||||||||||    
T  31623640 agtcttgtggcattcaatcaagactttttgtaacttaaaaaaagtctcttggtattcaatcaagact 31623706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 4302846 - 4302813
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||||||||||| ||||||||||||||||||    
T  4302846 ttttaaaaaagtctttaggtattcaatcaagact 4302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 4950141 - 4950092
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||| |||| || |||| ||||||||||| |||||||    
T  4950141 tattcaaaatcattcaagtttcaaaagattatttaataaattagattttg 4950092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 10295642 - 10295565
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    |||||||| |||||||||||||||| ||||  | || | |||||||||  || |||||||||||||| ||| ||||||    
T  10295642 agtcttgtggtattcaatcaagactttttgcaacttaagaaaagtcttctggcattcaatcaagactcttcgtcactt 10295565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 8543502 - 8543574
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||| ||| ||||  |||| |||||||| ||||||| |||| |||||||||||  |||||||||| ||||    
T  8543502 ttaaaaaaagtgttgtgttatttaatcaagattctttgttatttaaaaaaagtcttatggtattcaattaaga 8543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 37567401 - 37567365
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  37567401 ttttaaaaaagtctttaggtattcaattaagactttt 37567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 41069919 - 41070003
Alignment:
Q  6 caacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcat 90  Q
    |||||||||||  ||||| |  ||||||||||||||| |  |||||||  ||||||| ||| ||||||||| ||||||| |||||    
T  41069919 caacttaaaaaatgtcttatgatattcaatcaagactttacgtcatttataaaaagttttgtggtattcaaccaagactcttcat 41070003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 6e-89; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 37013884 - 37014122
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         
T  37013884 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 37013983  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 200  Q
      ||||   | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  37013984 aagtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttgtagtataattttaacaagaaaaagtctttcataaaaaga 37014083  T
Q  201 t-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    | ||||||||||| |||||||||||||||||||||||||    
T  37014084 tgagatttcttgagattgtttttcttttaaaagttacta 37014122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 4240688 - 4240440
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  4240688 ttttgcaacttaaaaaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 4240589  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  4240588 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtcttt 4240489  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||    
T  4240488 catgaatagatgagatttcttgagattgtttttcttttaaaagttacta 4240440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 1461374 - 1461126
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||         
T  1461374 ttttgcaacttaaaaatagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 1461275  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||   | |||||||||||||||||||||||||||||||||||||||||          ||||||||||| |||||||||||||||||||| |||||    
T  1461274 aagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtactgtaattttaacaagaaaaaatcttt 1461175  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  1461174 catgaaaagatgagatttcttgagattgtttttcttttaaaagttacta 1461126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5949079 - 5949323
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||         
T  5949079 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaa 5949178  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
       |||  || |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  5949179 aa-tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtcttt 5949277  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  5949278 catgaaaagatgagatttcttgagattgtttttcttttaaaagtta 5949323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 40013938 - 40013690
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  40013938 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 40013839  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
       |||  || ||||||||||||||||||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||||||||||    
T  40013838 aaatcttgtgttattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcttt 40013739  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| ||||||||||| ||||||||| |||| ||||||||||    
T  40013738 catgaaaagatgagatttcttgagattgtttttgtttttaaagttacta 40013690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 1152339 - 1152081
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||         
T  1152339 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaa 1152240  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||||||||||||||||| |||||||||||||||||                    |||||||||||||||||||||||||||    
T  1152239 aagtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 1152140  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||    
T  1152139 aaaagtcttttatgaaaagatgagatttcttaagattgtttttcttttaaaagttacta 1152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 13925901 - 13926159
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||         
T  13925901 ttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaa 13926000  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  13926001 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 13926100  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||||| |||||||| | ||||||||| |||||||||||| ||||||||||||    
T  13926101 aaaagtctttcaagaaaagatgatatttcttgagattgtttttcttctaaaagttacta 13926159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 14000341 - 14000083
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| | |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||         
T  14000341 ttttgcaatttaaaaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 14000242  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||| ||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  14000241 aagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 14000142  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  14000141 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 14000083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 22746267 - 22746502
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||         
T  22746267 ttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaa 22746366  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtag--tgtaattttaacaagaaaaagtct 188  Q
      ||||  |||||||||||||||||||||||||||| |||||||||||||||          |||||||||| |  |||||||||||||||||||| |||    
T  22746367 aagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactct 22746466  T
Q  189 ttcatgaaaagat-agatttcttgaaattgtttttc 223  Q
    ||||||||||||| ||||||||| | ||||||||||    
T  22746467 ttcatgaaaagataagatttcttaagattgtttttc 22746502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 235
Target Start/End: Complemental strand, 7947779 - 7947554
Alignment:
Q  31 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaat 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||   |||||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  131 ttcgaaggattgtttaataaattggattttg--------------------tagtgtaattttaacaagaaaaagtctttcatgaaaag-atagatttct 209  Q
    |||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||| | ||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  210 tgaaattgtttttcttttaaaagtta 235  Q
    ||||||||||||||||||||||||||    
T  7947579 tgaaattgtttttcttttaaaagtta 7947554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 4550493 - 4550333
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||         
T  4550493 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaa 4550394  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4550393 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4550333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 21147046 - 21147197
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  21147046 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 21147145  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  21147146 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 21147197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 139252 - 139393
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||| ||||||||| || |||||||||||||||||||| |||||||       ||||| |    
T  139252 ttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagt 139351  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaa 151  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  139352 ggtattcaaaatcattcaaatttcgaaggattgtttaataaa 139393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 39852372 - 39852573
Alignment:
Q  58 aaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggat 157  Q
    |||||||||||||||||||||||||||| |||||| ||       ||||  || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  158 --------------------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttac 236  Q
                        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttac 39852571  T
Q  237 ta 238  Q
    ||    
T  39852572 ta 39852573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 5273146 - 5272995
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||  ||||||||||||||||| || |||| ||       ||||| |    
T  5273146 ttaaaaaaagtcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagt 5273047  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  5273046 ggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 5272995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 7016958 - 7016815
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| ||||||||||||||||||||   |||| ||||||||||||  |||||||||||||||| || |||||||       ||||| || ||||||    
T  7016958 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 7016859  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  7016858 aaatcattcaaatttcgaaggattgtttaataaatcagattttg 7016815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 9220942 - 9220780
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    ||||||||||||||| |||| | |  ||||||||||| ||||||||||||||  ||||||||||| | ||||||||||||||| || |||||||          
T  9220942 tttgcaacttaaaaaaagtcatatgatattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaa 9220843  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtag 164  Q
     ||||  ||||||||||||||||||||||||| |||||||||||||| |||| || |||||||    
T  9220842 agtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattagaatttgtag 9220780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 14465437 - 14465303
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattc 126  Q
    ||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||| |||||| |||       ||||  || |||||||||||||||    
T  14465437 gtattcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattc 14465338  T
Q  127 aaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||| ||||||||||||||| ||||||||    
T  14465337 aaatttcgaaagattgtttaataaatcggattttg 14465303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 32158123 - 32157973
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctattg 110  Q
    ||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||   | |||||||        ||||| ||    
T  32158123 aaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtg 32158024  T
Q  111 atattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32158023 gtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttg 32157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 33656270 - 33656117
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactcttt--gtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtcta 107  Q
    ||||||| ||||||||  ||||||||||||| |||||  ||||||| |||||||||||| ||||||||||||||||| || |||||||        ||||    
T  33656270 ttaaaaaaagtcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatcta 33656171  T
Q  108 ttgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     || |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  33656170 atggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 33656117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 27459176 - 27459026
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  |||||||| |||| |||||||||||| ||||||||||||  |||||||||||||||| || |||||||       ||||| |    
T  27459176 ttaaaaaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcactt-aaaaaagtctagt 27459078  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  27459077 ggtattcaaaatcattcagattttgaaggattgtttaataaattagattttg 27459026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 6460767 - 6460922
Alignment:
Q  6 caacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtc 105  Q
    ||||||||||| |||||| |  ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||||| || |||| ||        ||    
T  6460767 caacttaaaaaaagtcttatgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatc 6460866  T
Q  106 tattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    || || ||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  6460867 tagtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttg 6460922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 849172 - 849277
Alignment:
Q  56 aaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattgg 155  Q
    ||||||||||| ||||||||||||||||| || |||||||       ||||| || |||||||||||||||||||||||||||||||||||||||||  |    
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  156 attttg 161  Q
    ||||||    
T  849272 attttg 849277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 4550318 - 4550246
Alignment:
Q  156 attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttctttt 227  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||| ||||    
T  4550318 attttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttgttgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 5273188 - 5273116
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||| ||||||||  ||||||||||||| | |||||||||| |||||||||||| | |||||||||||||    
T  5273188 ttaaaaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaaga 5273116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 4550518 - 4550452
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  4550518 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 4550452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 9689635 - 9689787
Alignment:
Q  6 caacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtc 105  Q
    ||||||||||  |||| | | ||||||||||||||||||| ||||||| ||||||   | | ||||||||||||||||| ||||||||||       |||    
T  9689635 caacttaaaagaagtcgtctggtattcaatcaagactctt-gtcatttaaaaaaaca-tcgtggtattcaatcaagactcttcatcacttaaaaaaagtc 9689732  T
Q  106 tattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |  || |||| ||||||||| |||||||||| |||||||| ||||||| |||||||    
T  9689733 ttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttg 9689787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 14000366 - 14000300
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||| ||||| |||||||||||||||||    
T  14000366 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttgtggtattcaatcaagact 14000300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 37013859 - 37013925
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  37013859 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 37013925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 40013963 - 40013897
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||||  ||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  40013963 agtcttgtgatattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 40013897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 33656304 - 33656240
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  33656304 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 33656240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16894119 - 16894044
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    |||||| |||||||||||| | |||||   |||| |||||||||||| ||||||||||||||||| || |||||||    
T  16894119 tcttgtggtattcaatcaaaattctttccaatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 7016924 - 7016858
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  7016924 ttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7016858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 21147012 - 21147076
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| ||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  21147012 agtcgtgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 21147076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 5273220 - 5273153
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||| |||||||||||||| |||||   |||| |||||||||||| | ||||||||||||| ||||    
T  5273220 tcttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 5273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32158160 - 32158095
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcatttt--aaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||||||||| ||| |||  |||||||||||| | |||||||||||||    
T  32158160 agtcttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaaga 32158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 4240709 - 4240647
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||||||||||| ||||  | || |||||| ||||| |||||||||||||||||    
T  4240709 ttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagact 4240647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 5949058 - 5949120
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||||||| ||| ||||  | || |||||||||||| |||||||||||||||||    
T  5949058 ttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 5949120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 13925876 - 13925942
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| ||||| |||||||||| ||||  | || |||||||| ||| |||||||||||||||||    
T  13925876 agtcttgtggtatttaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 13925942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 26806611 - 26806578
Alignment:
Q  54 taaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||| ||||||||||||||||||||    
T  26806611 taaaaaagtcttgtggtattcaatcaagactttt 26806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 139218 - 139282
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| | ||||||||||||||||||||   |||| |||||||| ||| | |||||||||||||    
T  139218 agtcttttagtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaaga 139282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 1152362 - 1152298
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| ||||| |||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  1152362 tcttgtggtatttaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 1152298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 6460737 - 6460801
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   | || |||||||||||  | |||||||||||||    
T  6460737 agtcttgtggtattcaatcaagactctttccaacttaaaaaaagtcttatgttattcaatcaaga 6460801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 27459210 - 27459146
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||| || ||||||||||||||||||||   |||| |||||||||||| | |||||||| ||||    
T  27459210 agtctcgtagtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaaga 27459146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 111)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 49835050 - 49834812
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||         
T  49835050 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaa 49834951  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 200  Q
      ||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  49834950 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaagaagtctttcattaaaaga 49834851  T
Q  201 t-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    | ||||||||||| ||||||||||| |||||||||||||    
T  49834850 tgagatttcttgagattgtttttctattaaaagttacta 49834812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 32684207 - 32683988
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||  || ||||||    
T  32684207 agtcttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatca-tttaaaaaagtcttgtggtattca 32684109  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaatt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||    
T  32684108 aaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagatt 32684009  T
Q  217 gtttttcttttaaaagttact 237  Q
    |||||||||||||||||||||    
T  32684008 gtttttcttttaaaagttact 32683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 23987200 - 23987431
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||||  || ||||||    
T  23987200 agtcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattca 23987299  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatt 206  Q
    ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23987300 aaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 23987399  T
Q  207 tcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| |||||||||||||||||||||||||    
T  23987400 tcttgagattgtttttcttttaaaagttacta 23987431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 30967536 - 30967288
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||         
T  30967536 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaa 30967437  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || |||||||||||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||| |||||    
T  30967436 aagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttt 30967337  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||| || ||||||||||| ||||||||| |||||||||||||||    
T  30967336 catgaaaaaataagatttcttgagattgttttttttttaaaagttacta 30967288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 51320890 - 51321148
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  51320890 ttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 51320989  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg--------------------tagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||    
T  51320990 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaaga 51321089  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  51321090 aaaagtttttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttacta 51321148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 5441373 - 5441631
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  5441373 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 5441472  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  5441473 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 5441572  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  5441573 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 5441631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 27768025 - 27768283
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  27768025 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 27768124  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  27768125 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 27768224  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  27768225 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 27768283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 54341113 - 54341371
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  54341113 ttttgcaatttaaaaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 54341212  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  54341213 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 54341312  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  54341313 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 54341371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 54853705 - 54853448
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||         
T  54853705 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaa 54853606  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||| ||||||||||| |||||||||||||||||||                    |||||||||||||||||||||||||||    
T  54853605 aagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 54853506  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  54853505 aaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttact 54853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 37915803 - 37916054
Alignment:
Q  8 acttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtcta 107  Q
    ||||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||       ||||     
T  37915803 acttaaaaaaagtcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctt 37915902  T
Q  108 ttgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaagaaaaagtc 187  Q
     || ||||||||||||||||||||||||||||||||||||||||||                    ||||||||||||||| ||||||||||||||||||    
T  37915903 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtc 37916002  T
Q  188 tttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
     ||||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  37916003 attcatgaaaagataagatttattgagattgtttttcttttaaaagttacta 37916054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 49501737 - 49501501
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||       ||||  ||     
T  49501737 aaaaaaagtcttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtgg 49501638  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattgg----------attttgtagtgtaattttaacaagaaaaagtctttc--atgaaaag 199  Q
     |||||||||||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||  || |||||    
T  49501637 cattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaag 49501538  T
Q  200 at-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    || ||||||||||| ||||||||||||||||||||||    
T  49501537 atgagatttcttgagattgtttttcttttaaaagtta 49501501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 49507802 - 49507566
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||       ||||  ||     
T  49507802 aaaaaaagtcttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtgg 49507703  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattgg----------attttgtagtgtaattttaacaagaaaaagtctttc--atgaaaag 199  Q
     |||||||||||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||  || |||||    
T  49507702 cattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaag 49507603  T
Q  200 at-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    || ||||||||||| ||||||||||||||||||||||    
T  49507602 atgagatttcttgagattgtttttcttttaaaagtta 49507566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 37828639 - 37828381
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| | |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||         
T  37828639 ttttgcaaattaaaaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaa 37828540  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||| ||||    
T  37828539 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaaga 37828440  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||    
T  37828439 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaaattacta 37828381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5799946 - 5800192
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||   |||| |||||  ||||| ||||||||||||||         
T  5799946 ttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaa 5800045  T
Q  101 nn-gtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt----------agtgtaattttaacaagaaaaagtctt 189  Q
       ||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||          || ||||||||||||||||||||||||    
T  5800046 aaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctt 5800145  T
Q  190 tcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    | |||||||||| |||||| |||| ||||||||||||||||||||||    
T  5800146 taatgaaaagataagattttttgagattgtttttcttttaaaagtta 5800192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 12913204 - 12913437
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||       ||||  ||     
T  12913204 aaaaaaagtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatgg 12913303  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||          ||||| ||||||||||||||||||| ||||||||| | ||    
T  12913304 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacat 12913403  T
Q  202 -agatttcttgaaattgtttttcttttaaaagtt 234  Q
     |||||||||| |||| |||||||||||||||||    
T  12913404 gagatttcttggaattatttttcttttaaaagtt 12913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 32322060 - 32322315
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||| |||||||||| |||| |||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||         
T  32322060 ttttgtaacttaaaaaaagtcatgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaa 32322159  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||| ||||    
T  32322160 tagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataaga 32322259  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||| ||||||||| ||||||| ||||||||||| |||||||||||||||| |||||    
T  32322260 aaatgtctttcataaaaagatgagatttcttgagattgtttttcttttaatagtta 32322315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 50018220 - 50018449
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||| ||| ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||         
T  50018220 ttttacaatttaaaaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaa 50018319  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||| ||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  50018320 aagtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtcttt 50018419  T
Q  191 catgaaaagat-agatttcttgaaattgtt 219  Q
    || |||||||| |||||| |||| ||||||    
T  50018420 caagaaaagatgagatttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 36479451 - 36479228
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||       ||||  || ||||||    
T  36479451 agtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattca 36479352  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg---------tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agattt 207  Q
    |||| ||||||||||||||||||| |||||||||||||||||||         ||||| ||||||| ||| ||||||||||| ||||||| || ||||||    
T  36479351 aaattattcaaatttcgaaggattatttaataaattggattttgatggatttttagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagattt 36479252  T
Q  208 cttgaaattgtttttcttttaaaa 231  Q
    ||||| ||| ||||||||||||||    
T  36479251 cttgagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29649904 - 29649744
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||  || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  29649904 ttttgcaatttaaaaaaagtcttgtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 29649805  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
      ||||  || ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29649804 aagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttg 29649744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 153
Target Start/End: Original strand, 9163050 - 9163197
Alignment:
Q  6 caacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtc 105  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |       |||    
T  9163050 caacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtc 9163149  T
Q  106 tattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt 153  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||    
T  9163150 ttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaatt 9163197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 41725094 - 41725346
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | | |||| |||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| |         
T  41725094 ttttgcaacttaaaaaaaatattgtggtattcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaa 41725193  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgttta------------ataaatt-----ggattttgtagtgtaattttaacaagaaaa 183  Q
      ||||  |||||||||||||||||||||||| |||||||||||||            || ||||     ||||||| ||||||||||||||||||||||    
T  41725194 aagtcttgtgatattcaaaatcattcaaattttgaaggattgtttaaattggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaa 41725293  T
Q  184 agtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    | |||||||||||||||| ||||||||||   ||| |||| |||||||||||||||    
T  41725294 aatctttcatgaaaagatgagatttcttg---ttggttttattttaaaagttacta 41725346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 231
Target Start/End: Original strand, 28483923 - 28484108
Alignment:
Q  56 aaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattgg 155  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||  || |||||||||||||||||||||||||||||| |||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  156 attttgtag-----tgta----attttaacaagaaaaagtctttcatgaaaaga-tagatttcttgaaattgtttttcttttaaaa 231  Q
    |||||||||     ||||    | ||||||||||||||||||||||||||||||  ||||||||| | ||| ||||||||||||||    
T  28484023 attttgtaggattttgtagtgtaatttaacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa 28484108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 25331109 - 25331260
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  25331109 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 25331208  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  25331209 gatattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttg 25331260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 44771074 - 44770930
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggt-attcaatcaagacttttcatcacttnnnnnnngtctattgatattc 116  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||        |||  || |||||    
T  44771074 agtcttgtgatattcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattc 44770975  T
Q  117 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  44770974 aaaatcattcaaattttgaaggattgtttaataaattggattttg 44770930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 55302821 - 55302972
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  | ||||||||||| |||||||||||||||||||||| || ||||||||||||||||| || |||||||       ||||| |    
T  55302821 ttaaaaaaagtcttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 55302920  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  55302921 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 55302972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 12112925 - 12113065
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| || |||||||       ||||| ||     
T  12112925 aaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatgg 12113024  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12113025 tattcaaaatcattcaaatttcgaaggattgtttaataaat 12113065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 28370910 - 28371053
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||       ||||  || ||||||    
T  28370910 agtcttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattca 28371009  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||  |||||||||||||||||||| ||||||    
T  28371010 aaatcattcaaattttaaaggattgtttaataaattgaattttg 28371053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 28541676 - 28541827
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||| | ||||||||||||||||| || |||||||       ||||| |    
T  28541676 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 28541775  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  28541776 ggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 28541827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 32951064 - 32950913
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| | |||||||||| ||||||||| || ||||||||||||||||| || |||||||       ||||| |    
T  32951064 ttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 32950965  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  32950964 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 32950913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 7007354 - 7007503
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| ||||||||  ||||||||||||| ||| |||||||| ||||||||| || ||||||||||||||||| || |||||||       ||||| ||     
T  7007354 aaaaaaagtcttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 7007453  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  7007454 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 7007503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 37046680 - 37046528
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctat 108  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||||||        |||||     
T  37046680 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctag 37046581  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  37046580 tgatatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 37046528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 1112871 - 1113022
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  1112871 ttaaaaaaagtattgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 1112970  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||| || |||||||||||||||  |||||||    
T  1112971 ggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 1113022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 19741136 - 19740985
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| ||||||||||||  |||||||| || |||||||| ||||||||||| |||||||       ||||  |    
T  19741136 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgt 19741037  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  19741036 ggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttg 19740985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 22201993 - 22202135
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  22201993 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 22202092  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
    | |||||||||||||| ||||||| || |||||||||||||||    
T  22202093 ggtattcaaaatcattaaaatttcaaaagattgtttaataaat 22202135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 46635870 - 46635728
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| | ||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       || || |    
T  46635870 ttaaaaaaaatcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagt 46635771  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
      |||||||||||||||||||||||||||||||||||||||||    
T  46635770 agtattcaaaatcattcaaatttcgaaggattgtttaataaat 46635728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 41881308 - 41881159
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctattga 111  Q
    |||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||        || || ||     
T  41881308 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtgg 41881209  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  41881208 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 41881159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 25504867 - 25504716
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| ||||  |||||| |||||| ||||| | ||||||||||||||| || |||||||       ||| | |    
T  25504867 ttaaaaaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagt 25504768  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  25504767 gatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 25504716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 20021314 - 20021407
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    ||||||| ||||||| ||| |||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  20021314 tttgcaatttaaaaaaagttttgtggtattcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatcactt 20021407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 31314965 - 31314808
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||| ||| ||||||| ||||||||  |||| |||||||| |||||||||||| |||||||||||| |||||||||    |||| || |||||||         
T  31314965 tttttcaatttaaaaaaagtcttgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaa 31314870  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
      ||||| || |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  31314869 aagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgt 31314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 210
Target Start/End: Complemental strand, 40537373 - 40537167
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || |||||||       |     |    
T  40537373 ttaaaaaaagtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaatg-----t 40537279  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 199  Q
    | |||||||||||||| |||||||||| |||||||||||||||          |||||||||| ||| ||||||| || ||||||||||||||||||||     
T  40537278 ggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaac 40537179  T
Q  200 at-agatttctt 210  Q
    || |||||||||    
T  40537178 atgagatttctt 40537167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 25446037 - 25446179
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    ||||||||  ||||||||||||| | |||||||||| |||||| ||||| ||||||||||||||||| || |||||||       ||||| || ||||||    
T  25446037 agtcttgtattattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 25446135  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||| |||||||||||||||  |||||||    
T  25446136 aaatcattcaaatttcgaatgattgtttaataaatcagattttg 25446179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 48261269 - 48261354
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||||| |||||||||||||||    
T  48261269 ggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagttacta 48261354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 1044790 - 1044936
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| ||||||||  ||||||||||||| || |||||||||  ||||||||||| ||||||||||||||||| || |||||||       ||||| || |    
T  1044790 aaaaaagtcttgtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 1044887  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||| ||||||| |||||||||||||||||||||||  |||||||    
T  1044888 attcaaaaccattcaactttcgaaggattgtttaataaatcagattttg 1044936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 23464934 - 23465075
Alignment:
Q  11 taaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattg 110  Q
    |||||| ||||||||  ||||||||||||| || ||||||||| |||||||| |||   ||||||||||||||| || |||||||       ||||| ||    
T  23464934 taaaaaaagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtg 23465033  T
Q  111 atattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
     ||||||||| |||||||||||||||||||||||||||||||    
T  23465034 gtattcaaaaccattcaaatttcgaaggattgtttaataaat 23465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 53275835 - 53275968
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    |||||||| |||| | |||||||||| ||||||||||||  |||||||||||||| |||| |||||||       ||||| ||||||| |||||||||||    
T  53275835 tattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattca 53275934  T
Q  128 aatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||| ||||||||  |||||||    
T  53275935 aatttcgaaggattgtgtaataaatcagattttg 53275968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 39479585 - 39479432
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt--nnnnnnngtcta 107  Q
    ||||||| ||||||||  ||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||| || |||||||         | ||     
T  39479585 ttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagactt 39479486  T
Q  108 ttgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     || |||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  39479485 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 39479432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 34228793 - 34228660
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||| |||||||||||| ||||||||| || ||||||||||||| | | || |||||||       ||||| || |||||||||||||| |    
T  34228793 tattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattga 34228694  T
Q  128 aatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||| |||||||||||||||  |||||||    
T  34228693 aatttcgaatgattgtttaataaatcagattttg 34228660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37915754 - 37915837
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||| |||||||||| |||||||| |||||||||||||||| ||||||| || |||||||||||| |||||||||||||||||    
T  37915754 ttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagact 37915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 24131200 - 24131115
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||    
T  24131200 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt 24131115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 3436589 - 3436722
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||| | |||||| ||| |||||| ||||| | ||||||||||||||| || |||| ||        |||| || ||||||||||||||||    
T  3436589 tattcaatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattca 3436688  T
Q  128 aatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||  |||||||    
T  3436689 aatttcgaaggattgtttaataaatcagattttg 3436722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 42786708 - 42786804
Alignment:
Q  56 aaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
    ||||||||||| ||||||||||||||||| || |||| ||       ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 42786804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 30009905 - 30009754
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  |||| |||||| | ||||| |||||| ||||||||| || ||||||||||||||||| || |||||||       ||||| |    
T  30009905 ttaaaaaaagtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 30009806  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||| ||||||  || |||||||||||||||  |||||||    
T  30009805 ggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttg 30009754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 56445471 - 56445346
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat 201  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||          ||||| || |||| |||||||||||||||||| || | ||    
T  56445471 tattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataaagacat 56445372  T
Q  202 -agatttcttgaaattgtttttcttt 226  Q
     ||||||||||| |||||||||||||    
T  56445371 gagatttcttgagattgtttttcttt 56445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 39307469 - 39307337
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaat 121  Q
    |||| |||||||||||||| | |||| |||||||||||||||||| ||||||||||||||| | ||||||| ||       ||||  || |||||| |||    
T  39307469 ttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataat 39307370  T
Q  122 cattcaaatttcgaaggattgtttaataaattg 154  Q
    |||||||||||| || |||| |||||| |||||    
T  39307369 cattcaaatttctaaagattatttaatgaattg 39307337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 8712008 - 8712086
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaa 231  Q
    ||||||| ||||| ||||||| |||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||    
T  8712008 ggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgtttttcttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 37915729 - 37915798
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||| |||||||||||||||| ||||| | || |||||||||||| ||||||||||||||||||||    
T  37915729 agtcttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 48261207 - 48261256
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48261207 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttg 48261256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 11090336 - 11090408
Alignment:
Q  19 gtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 91  Q
    ||||||| |||||||||||||| |||||| || || |||||||| ||| ||||||||||||||||||||||||    
T  11090336 gtcttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 5441348 - 5441414
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  5441348 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 5441414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 7249900 - 7249842
Alignment:
Q  103 gtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 7249842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29855651 - 29855728
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 79  Q
    |||||||| ||||||| ||| |||| ||||| |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  29855651 ttttgcaatttaaaaaaagttttgt-gtatttaatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 30967561 - 30967495
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  30967561 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 30967495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 41320881 - 41320939
Alignment:
Q  103 gtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 41320939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 24736478 - 24736550
Alignment:
Q  155 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttt 226  Q
    |||||| ||||| |||||||||||||| |||||||||||||||| || ||||||||||  |||||||||||||    
T  24736478 gattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgtttttcttt 24736550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 41881345 - 41881281
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   ||||||||||||||||| | |||||||||||||    
T  41881345 agtcttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaga 41881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 40537412 - 40537341
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||| ||||||||| |||||||||| | |||| |||||||||||| | |||||||||||||||    
T  40537412 aaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagact 40537341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 41582016 - 41581868
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| |||| ||| ||| |||||||  ||||||||||||||||||||||| |||||||| | |||| ||||| | ||||       ||||  |    
T  41582016 ttaaaaaaagttttgtagtactcagtcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgt 41581917  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggatt 158  Q
    | |||| | | |||||||||||| |||  ||||||||||||||||||||    
T  41581916 ggtatttagagtcattcaaattttgaataattgtttaataaattggatt 41581868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 27768000 - 27768066
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  27768000 agtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 27768066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 54341088 - 54341154
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||  |||||||||||||||||    
T  54341088 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttatggtattcaatcaagact 54341154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 54853730 - 54853664
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  54853730 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 54853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 3436735 - 3436804
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||| || |||||||||  ||||||||||    
T  3436735 ggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattgttttt 3436804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 37046719 - 37046650
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  37046719 aaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 37046650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 39479624 - 39479555
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  39479624 aaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 39479555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 1044754 - 1044817
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||  || ||||||||||||||| | |||||||||||||    
T  1044754 agtcttgtggtattcaatcaagactcttt-ccaatttaaaaaagtcttgtgttattcaatcaaga 1044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 20021288 - 20021352
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||| |||||||||||||||  |||| |||||||| ||| |||||||||||||||    
T  20021288 agtcttgtggtatttaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaaga 20021352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 24131234 - 24131170
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  24131234 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 24131170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 25331075 - 25331139
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  25331075 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 25331139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 25504901 - 25504837
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  25504901 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 25504837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 28541642 - 28541706
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  28541642 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 28541706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32951098 - 32951034
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  32951098 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 32951034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 50018190 - 50018261
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||| |||||||||||||||| |||   |||| |||||||||||  |||||||||||||||||    
T  50018190 aaaaaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtcttatggtattcaatcaagact 50018261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 19741168 - 19741106
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  19741168 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19741106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 24131158 - 24131092
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  24131158 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 24131092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 37828664 - 37828598
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||| ||||| |||||||||||||||||    
T  37828664 agtcttgtggtattcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagact 37828598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 39307436 - 39307374
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattca 75  Q
    |||| |||||||| |||||||||||||| ||||  |||||| |||||||||||| ||||||||    
T  39307436 aaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattca 39307374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 42786712 - 42786770
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    |||||||| |||||||||||||||||||  |||||| |||||||||| | |||||||||    
T  42786712 agtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaa 42786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 49835075 - 49835009
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||| ||| ||||  | || |||||||||||| |||||||||||||||||    
T  49835075 agtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 49835009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 7249998 - 7249926
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||| ||||||||  ||||||||||||| |||| ||||||| |||||  ||||| ||||||| |||||||||    
T  7249998 aaaaaaagtcttgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagact 7249926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 22201959 - 22202023
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||||  |||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  22201959 agtcttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 22202023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 36728013 - 36727937
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatagatttcttgaaattgtttttcttttaaa 230  Q
    ||||||| ||||| ||||||||||||||||| |||||||||| |    |||||| |||| ||||||||| |||||||    
T  36728013 ggattttttagtgaaattttaacaagaaaaaatctttcatgagacatgagattttttgagattgttttttttttaaa 36727937  T

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Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 12913167 - 12913234
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattt-taaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||||||| | ||||  |||||||||||| |||||| ||| ||||||    
T  12913167 agtcttgtggtattcaatcaagactctttataatttaaaaaaaagtcttgtggtatttaattaagact 12913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 7007394 - 7007460
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||| ||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  7007394 ttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7007460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 25446070 - 25446136
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| | |||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  25446070 ttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 25446136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 30009939 - 30009877
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||||| ||||||||||||||||||||||   |||| |||||||||||| | |||| ||||||    
T  30009939 agtcttattgtattcaatcaagactctttccaatttaaaaaaagtcttgtgttatttaatcaa 30009877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 41320788 - 41320830
Alignment:
Q  42 tctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||| |||||| |||||||||||| |||||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaagact 41320830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 51320869 - 51320931
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||||||||||| ||||  | || |||||||| ||| |||||||||||||||||    
T  51320869 ttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 51320931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 1044957 - 1045018
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||| ||||||| || |||||||||||||||||||| || |||||||||  ||||||||||    
T  1044957 tagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagaattgttttt 1045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 7250033 - 7249970
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcatttt--aaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| |||||||||||||||||||| ||| |||  |||||||||||| | |||||||||||||    
T  7250033 tcttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaaga 7249970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 12113095 - 12113156
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||| ||||||| || |||||||||||||||||||| || ||||||||||  |||||||||    
T  12113095 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 27454204 - 27454155
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||| ||| |||| ||||||||||  |||||||    
T  27454204 tattcaaaatcattcaaattttgaaagattatttaataaatcagattttg 27454155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 28100617 - 28100584
Alignment:
Q  54 taaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||| ||||||||||||||||||||    
T  28100617 taaaaaagtcttgtggtattcaatcaagactttt 28100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 46635909 - 46635840
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| |||||||| ||||||||||||||||||||   |||| |||||| |||||   |||||||||||||    
T  46635909 aaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaatcttgtattattcaatcaaga 46635840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 50018189 - 50018222
Alignment:
Q  54 taaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||| ||||||||||||||||||||    
T  50018189 taaaaaagtcttgtggtattcaatcaagactttt 50018222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 23464899 - 23464963
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   || | ||||||||||||   |||||||||||||    
T  23464899 agtcttgtggtattcaatcaagactctttccaatataaaaaaagtcttgtattattcaatcaaga 23464963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 26336123 - 26336159
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26336123 ttttaaaaatgtctttaggtattcaatcaagactttt 26336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 34228844 - 34228781
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| ||||||||| || | |||||||||||||    
T  34228844 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtc-tgtgttattcaatcaaga 34228781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 41320798 - 41320834
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactcttt 46  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  41320798 ttaaaaaaagtcttgtggtattcaatcaagactcttt 41320834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 41762017 - 41762061
Alignment:
Q  43 ctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||| ||| ||||||||||||| |||||| |||||||||||||    
T  41762017 ctttgtgattataaaaaagtcttgtggtattgaatcaagactttt 41762061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 47685190 - 47685226
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||||| |||| |||||||||||||||||||||    
T  47685190 ttttaaaaaaatctttaggtattcaatcaagactttt 47685226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 2e-86; HSPs: 112)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 23753623 - 23753386
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  23753623 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 23753524  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 200  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23753523 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaaga 23753425  T
Q  201 t-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    | ||||||||||| ||||||||| |||||||||||||||    
T  23753424 tgagatttcttgagattgtttttgttttaaaagttacta 23753386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 10728861 - 10728630
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||  || |||| |    
T  10728861 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtattta 10728762  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatt 206  Q
    ||||||||||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||    
T  10728761 aaatcattcaaatttggaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 10728662  T
Q  207 tcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| |||||||||||||||||||||||||    
T  10728661 tcttgagattgtttttcttttaaaagttacta 10728630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 44906750 - 44906492
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  44906750 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 44906651  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  44906650 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaaga 44906551  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  44906550 aaatgtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttacta 44906492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 39038030 - 39038257
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaat 121  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||  || ||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  122 cattcaaatttcgaaggattgtttaataaattgga----------ttttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    |||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T
Q  211 gaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||||||||||    
T  39038230 gaaattgtttttcttttaaaagttacta 39038257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 50762287 - 50762039
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||         
T  50762287 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaa 50762188  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||||||| ||||||||| |||||||| |||||||||||||||          |||||||||||||||||||||||||||||    
T  50762187 aagtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtcttt 50762088  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  50762087 catgaaaagatgagatttcttgagattgtttttcttttaaaagttacta 50762039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 40897113 - 40897360
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  40897113 ttttgcaacttaaaaaaagtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 40897212  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg--------------------tagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||    
T  40897213 aagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaaga 40897312  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttctttt 227  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  40897313 aaaagtctttcatgaaaagatgagatttcttgatattgtttttctttt 40897360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 36674367 - 36674109
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  36674367 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 36674268  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||| ||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  36674267 aagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 36674168  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  36674167 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 36674109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 17946274 - 17946515
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||  |||||||||    
T  17946274 agtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattca 17946373  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaagtctttcatgaaa 197  Q
    |||||||||||||||| |||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||    
T  17946374 aaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 17946473  T
Q  198 agat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  17946474 agatgagatttcttgagattgtttttcttttaaaagttacta 17946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 34484267 - 34484009
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  34484267 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 34484168  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      || |  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  34484167 aagttttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 34484068  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  34484067 aaaaatctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttacta 34484009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 22 - 235
Target Start/End: Original strand, 37454851 - 37455075
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaat 121  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       ||||  || ||||||||||    
T  37454851 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 37454950  T
Q  122 cattcaaatttcgaaggattgtttaataaattg----------gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  37454951 cattcaaatttcgaatgattgtttaataaattgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 37455050  T
Q  211 gaaattgtttttcttttaaaagtta 235  Q
    || ||||||||||||||||||||||    
T  37455051 gagattgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 11431495 - 11431750
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  11431495 ttttgcaatttaaaaaaagtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 11431594  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||||||| |||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  11431595 aagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaaga 11431694  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  11431695 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 54628812 - 54629071
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcac-ttnnnn 99  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  54628812 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaa 54628911  T
Q  100 nnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaag 179  Q
        |||  || |||||||||||||||||||||| |||||||||||||||||||                    ||||||||||||||||||||||||||    
T  54628912 aaaatcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaag 54629011  T
Q  180 aaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||||    
T  54629012 aaaaagtctttcataaaaagatgagatttcttgagattgtttttcttttgaaagttacta 54629071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 26107230 - 26107487
Alignment:
Q  1 ttttgcaacttaaaaagagtctt-gttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnn 99  Q
    |||||||||||||||| |||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||        
T  26107230 ttttgcaacttaaaaa-agtcttagtcgtactcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaa 26107328  T
Q  100 nnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattg--------------------gattttgtagtgtaattttaacaag 179  Q
       ||||  || |||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||    
T  26107329 aaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaag 26107428  T
Q  180 aaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    ||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  26107429 aaaaagtatttcataaaaagatgagatttcttgagattgtttttcttttaaaagttact 26107487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 48379127 - 48379384
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | ||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         
T  48379127 ttttgcaacttaaaaaaaatcttgtgat-ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaa 48379225  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||| ||||    
T  48379226 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataaga 48379325  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  48379326 aaatgtctttcatgaaaagatcagatttcttgagattgtttttcttttaaatgttacta 48379384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10660504 - 10660664
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  10660504 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 10660603  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
      || |  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10660604 aagtattgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 10660664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 52618202 - 52618042
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||| |||||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  52618202 ttttgtaacttaaaaaaagtcatgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 52618103  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52618102 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 52618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 51737960 - 51737803
Alignment:
Q  5 gcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaa-aaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnng 103  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  51737960 gcaacttaaaaaaagtcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaag 51737861  T
Q  104 tctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737860 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 51737803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 31646521 - 31646265
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||| | |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||         
T  31646521 ttttgcaacttaaaaaaagtcttatggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaa 31646422  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
       |||  || ||||||||||||||||||||||||| ||||||||||| ||||                    |||||||||||||||||||||||||||    
T  31646421 aaatcttgtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 31646322  T
Q  181 aaaagtctttcatgaaaagatagatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||   ||||||||||| |||||| ||||||||||||||||||    
T  31646321 aaaagtctttcatgaaaa-tgagatttcttgagattgttattcttttaaaagttacta 31646265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 18749593 - 18749839
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| |||||||  |||||||||||| ||| ||  ||| |||||||||||||||||||||||||| || ||||||||||||||       ||||  || |    
T  18749593 aaaaaagtcttgaggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggt 18749692  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaagtctttca 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||    
T  18749693 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 18749792  T
Q  193 tgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18749793 tgaaaagatgagatttcttgagattgtttttcttttaaaagttacta 18749839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 32580167 - 32580403
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaat 121  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||       ||||  || ||||||||||    
T  32580167 ttgtggtattcgatcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 32580265  T
Q  122 cattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 201  Q
    ||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||||||    
T  32580266 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 32580365  T
Q  202 -agatttcttgaaattgtttttcttttaaaagttacta 238  Q
     ||||||||||| ||||||||| |||||||| ||||||    
T  32580366 gagatttcttgagattgtttttattttaaaaattacta 32580403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 52810368 - 52810599
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaat 121  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||  || ||||||||||    
T  52810368 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 52810467  T
Q  122 cattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 201  Q
    ||||||||||| ||| ||||||||||||||||                    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  52810468 cattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagat 52810567  T
Q  202 -agatttcttgaaattgtttttcttttaaaag 232  Q
     ||||||||||| |||||||||||||||||||    
T  52810568 gagatttcttgagattgtttttcttttaaaag 52810599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 44276367 - 44276598
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||  |    
T  44276367 ttaaaaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcat 44276466  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaag 199  Q
    | ||||||||||||||||||||    ||||||||||||||||||||||||||          ||||| ||||||||||||||||| ||||||||||| |     
T  44276467 ggtattcaaaatcattcaaatt----aggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagac 44276562  T
Q  200 at-agatttcttgaaattgtttttcttttaaaagtt 234  Q
    || |||||| |||  ||| |||||||||||||||||    
T  44276563 atgagattttttgggattatttttcttttaaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 50903480 - 50903317
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt---nn 97  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||         
T  50903480 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaa 50903381  T
Q  98 nnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
         ||||  || ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  50903380 aaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttg 50903317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 20832978 - 20833121
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||  || ||||||    
T  20832978 agtctcgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattca 20833077  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  20833078 aaatcattcaaattcggaaggattgtttaataaattggattttg 20833121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 6035264 - 6035130
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattc 126  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||  ||||||||||||||||||    
T  6035264 gtattcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattc 6035165  T
Q  127 aaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||| | ||||||||||||| |||||||    
T  6035164 aaatttcgaagcaatgtttaataaattagattttg 6035130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 18749539 - 18749633
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18749539 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt 18749633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 19253805 - 19253956
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  19253805 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 19253904  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  19253905 ggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttg 19253956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 39842648 - 39842475
Alignment:
Q  74 caatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgta 163  Q
    ||||||||| ||||||||||||       ||||  ||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||    
T  39842648 caatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgta 39842549  T
Q  164 gtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttac 236  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  39842548 atgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattgtttttcttttaaaagttac 39842475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 3999873 - 3999722
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||        |||| |    
T  3999873 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagt 3999774  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  3999773 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 3999722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 6975719 - 6975876
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||          
T  6975719 tttgtaacttaaaaaaagtcttgtggtattcaatcaagactctttgttatttt-aaaaagtcttgaggtattcaatcaagacttttcatcattt--aaaa 6975815  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
     ||||  || |||||||||||||||||||||||||| ||| |||| ||||||||| |||||    
T  6975816 agtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaattggaatttgt 6975876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 20498187 - 20498338
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  20498187 ttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 20498286  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  20498287 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 20498338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 996314 - 996163
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||| | || |||||||       ||||| |    
T  996314 ttaaaaaaagtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagt 996215  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  996214 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 996163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 10139374 - 10139223
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| || || |||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  10139374 ttaaaaaaagtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 10139275  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  10139274 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 10139223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 35337713 - 35337864
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  35337713 ttaaaaaaagtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 35337812  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||  ||||||||||||||||||||||||||||||  |||||||    
T  35337813 ggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttg 35337864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 37820705 - 37820554
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || |||||||       ||||| |    
T  37820705 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagt 37820606  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  37820605 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 37820554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 33808027 - 33807875
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctat 108  Q
    ||||||| ||||||||  |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||        |||||     
T  33808027 ttaaaaaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctag 33807928  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    || |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  33807927 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 33807875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 25418344 - 25418495
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||        ||||      
T  25418344 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagc 25418443  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||  ||||||||||||||||||  |||||||    
T  25418444 ggtattcaaaatcattcaaatttgaaaggattgtttaataaatcagattttg 25418495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 33996752 - 33996618
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattc 126  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||        || | || |||||||||||||||    
T  33996752 gtattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattc 33996653  T
Q  127 aaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||||||  |||||||    
T  33996652 aaatttcgaaggattgtttaataaatcagattttg 33996618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 37 - 234
Target Start/End: Complemental strand, 15493061 - 15492850
Alignment:
Q  37 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaattt---- 132  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||||  || |||||||||||||||||||||        
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt-aaaaatgtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  133 cgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttt 221  Q
      ||| ||| |||||||||||||||||||          ||||| ||||||||||||||||| |||||||||||   || ||||||||||| ||||||||    
T  15492962 ttaagaattatttaataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgtttt 15492863  T
Q  222 tcttttaaaagtt 234  Q
    | |||||||||||    
T  15492862 tattttaaaagtt 15492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 40246822 - 40246973
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| | ||||||  ||||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||| ||       ||||| |    
T  40246822 ttaaaaaaaatcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagt 40246921  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  40246922 ggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttg 40246973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 45862982 - 45863060
Alignment:
Q  153 tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaa 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  45862982 tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 51699707 - 51699557
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || |||||||        |||| |    
T  51699707 ttaaaaaaagtcttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagt 51699609  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  51699608 ggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttg 51699557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 29029992 - 29030134
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    ||||||||  |||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||  || ||||||    
T  29029992 agtcttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaagtcttgtggtattca 29030090  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||| |||||||||||||||||||  |||||||    
T  29030091 aaatcattcaaattttgaaggattgtttaataaatcagattttg 29030134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 1440178 - 1440029
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    |||| ||||||||  ||||||||||||| |||||||||||| |||||| || ||| ||||||||||||||||| || |||||||       ||||| ||     
T  1440178 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 1440079  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  1440078 tattcaaaatcattcaaatttccaaggattgtttaataaatcagattttg 1440029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 29449084 - 29448935
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| ||||||||  ||||||||||||| || |||||||||  ||||||||||| | ||||||||||||||| |  |||||||       ||||| ||     
T  29449084 aaaaaaagtcttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtgg 29448985  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  29448984 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 29448935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 52114506 - 52114658
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctat 108  Q
    ||||||| | ||||||  ||||||| ||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||        |||||     
T  52114506 ttaaaaaaaatcttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctag 52114605  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    || |||||||||| |||||||||||| |||||||||||||||||  |||||||    
T  52114606 tggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttg 52114658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 6589542 - 6589693
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||| | || ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||| |    
T  6589542 ttaaaaaaagtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagt 6589641  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||| ||| ||||||||||  |||||||    
T  6589642 ggtattcaaaatcattcaaatttcgaagaattatttaataaatcagattttg 6589693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 12103610 - 12103729
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| ||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||  || |    
T  12103610 aaaaaagtctcgtggtattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggt 12103709  T
Q  113 attcaaaatcattcaaattt 132  Q
    ||||||||||||||||||||    
T  12103710 attcaaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 44762265 - 44762114
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||||| || |||||||       ||||| |    
T  44762265 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagt 44762166  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||| ||||| |||||| |||||||||||||||||||||||  |||||||    
T  44762165 ggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttg 44762114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 53929336 - 53929205
Alignment:
Q  30 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaa 129  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| || |||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  130 tttcgaaggattgtttaataaattggattttg 161  Q
    | ||||| |||||||||||||||  |||||||    
T  53929236 tatcgaacgattgtttaataaataagattttg 53929205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 54625570 - 54625721
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||| | || ||||||||| |||||| |||||  |||||||||||||||| || |||||||       ||||| |    
T  54625570 ttaaaaaaagtcttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagt 54625669  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  54625670 ggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttg 54625721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 55235161 - 55235313
Alignment:
Q  6 caacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtc 105  Q
    ||||||||||| |||||||| || || |||||||| |||| |||||||||||||||||  ||||||||||||||| ||| ||||||| ||       |||    
T  55235161 caacttaaaaa-agtcttgtggtctttaatcaagattctt-gtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtc 55235257  T
Q  106 tattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |  |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  55235258 tcatgatattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttg 55235313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 539586 - 539481
Alignment:
Q  56 aaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattgg 155  Q
    ||||||||||||||||||||||||||| ||||||||| ||       ||||  || |||||||||||||||||||||||||||||| |||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  156 attttg 161  Q
    ||||||    
T  539486 attttg 539481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27240480 - 27240408
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 73  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  27240480 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 3206424 - 3206282
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| |||||||| |||||||||||||| |||||         ||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  3206424 ttaaaaaaagtcttgtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 3206334  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  3206333 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 3206282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 22057739 - 22057891
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattt-taaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctat 108  Q
    ||||||| ||||||||  ||||||||||||| ||||||||||||  ||||||  |||| ||||||| ||||||||| || |||||||        ||||     
T  22057739 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctag 22057838  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    || |||| ||||||||||||||||||| ||||||||||||||||  |||||||    
T  22057839 tggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttg 22057891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 52618029 - 52617950
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||||||||      |||||||| ||||||| ||||||||||| |||||||||||||||||||||||||    
T  52618029 ggattttgtagtgtaattttaacaag------tctttcataaaaagatgagatttcttgagattgtttttcttttaaaagttacta 52617950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 5825142 - 5825191
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5825142 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttg 5825191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 50903304 - 50903235
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||| || ||||||||||| |||||||||    
T  50903304 ggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttcttgagattgttttt 50903235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 27899424 - 27899476
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtag 164  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  27899424 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtag 27899476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 6131399 - 6131325
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||| ||| ||||  |||||||||||||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  6131399 ttaaaaaaagttttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagact 6131325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 10660479 - 10660545
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  10660479 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 10660545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 27899360 - 27899430
Alignment:
Q  6 caacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||||||| |||| | | ||||||||||||||||||||||||||| |||||||||| | |||||||||    
T  27899360 caacttaaaaaaagtcatatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 36674392 - 36674326
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  36674392 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 36674326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3206458 - 3206394
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  3206458 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaaga 3206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 23753648 - 23753584
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  23753648 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 23753584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 44276316 - 44276392
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 77  Q
    ||||| || ||||||| |||| ||| ||||||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  44276316 ttttgtaatttaaaaaaagtcatgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaat 44276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 51737780 - 51737709
Alignment:
Q  164 gtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    |||||||||||||||||||||||||||||| ||||||| ||  ||||||| |||||||||| |||||||||||    
T  51737780 gtgtaattttaacaagaaaaagtctttcataaaaagataagtattcttgagattgtttttc-tttaaaagtta 51737709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 11431470 - 11431536
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||| ||||||    
T  11431470 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaataaagact 11431536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 18749514 - 18749580
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  18749514 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 18749580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 27240505 - 27240439
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  27240505 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 27240439  T

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Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 44906775 - 44906709
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  44906775 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 44906709  T

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Target: chr3; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 50903505 - 50903439
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  50903505 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 50903439  T

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Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 52080007 - 52080057
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  52080007 tattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgt 52080057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 54628788 - 54628853
Alignment:
Q  19 gtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  54628788 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 54628853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 1440214 - 1440151
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||||| ||| ||| ||||||||||||||| | |||||||||||||    
T  1440214 agtcttgtggtattcaatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaaga 1440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 10139408 - 10139344
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  10139408 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 10139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 12103574 - 12103637
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||| | |||||||||| ||||    
T  12103574 agtcttgttgtattcaatcaatactctttgt-aatttaaaaaagtctcgtggtattcaattaaga 12103637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 19253771 - 19253835
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  19253771 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19253835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 20833142 - 20833182
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagata 202  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  20833142 tagtgtaattttaacaagaaaaagtatttcatgaaaagata 20833182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 35337679 - 35337743
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  35337679 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 35337743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 37820739 - 37820675
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  37820739 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 37820675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 44762299 - 44762235
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  44762299 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 44762235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 2024151 - 2024217
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| |||||||||| |||| | ||||| | |||| ||||||||||    
T  2024151 agtcttgtggtattcaatcaagactatttgtcatttaaaaataatcttgtgatatttaatcaagact 2024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 6589508 - 6589570
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||||||| ||||||||| |||||||||| | |||| |||||||||||| | |||||||||||    
T  6589508 agtcttgtggtattcaattaagactctttctaatttaaaaaaagtcttgtgttattcaatcaa 6589570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 29030026 - 29030091
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  |||  |||||||||||||| |||||||||    
T  29030026 ttaaaaaaagtcttgtggtattcaatcaagactcttaatca-cttaaaaaagtcttgtggtattcaa 29030091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 31646546 - 31646480
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||  |||||||||||||||||    
T  31646546 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttatggtattcaatcaagact 31646480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 50762308 - 50762246
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  50762308 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 50762246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 53929314 - 53929248
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  53929314 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 53929248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 996347 - 996284
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||  || || |||||||||||| | |||||||||||||    
T  996347 agtcttgtggtattcaatcaagactcttt-ccaattaaaaaaagtcttgtgttattcaatcaaga 996284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 6035103 - 6035039
Alignment:
Q  168 aattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaa 231  Q
    ||||||| || ||||||||||||||| |||| || ||||||||| | ||||||||||||||||||    
T  6035103 aattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 20498153 - 20498217
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||| ||| | |||||||||||||    
T  20498153 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 20498217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 40246788 - 40246852
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||||||||| |  ||| |||||| ||||| | |||||||||||||    
T  40246788 agtcttgtggtattcaatcaagactctttctggtttaaaaaaaatcttgtgttattcaatcaaga 40246852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 6131438 - 6131367
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| ||||||||  |||||||||||||  | ||||||||| |||||||| ||| | |||||||||||||||    
T  6131438 aaaaaagtcttgtgttattcaatcaagatccattgtcatttaaaaaaagttttgtgttattcaatcaagact 6131367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 6975712 - 6975759
Alignment:
Q  37 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||||||| | || |||||||||||| |||||||||||||||||    
T  6975712 aagactctttgtaacttaaaaaaagtcttgtggtattcaatcaagact 6975759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 10660691 - 10660738
Alignment:
Q  192 atgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  10660691 atgaaaagatgagatttcttgagattgtttttattttaaaagttacta 10660738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 23535937 - 23535890
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 159  Q
    ||||||||||||||||||||| ||||||| ||||||| |||| |||||    
T  23535937 tattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 38772321 - 38772371
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgag 68  Q
    |||||||| |||||||||||||| ||||||| | || ||||||||||||||    
T  38772321 agtcttgtggtattcaatcaagattctttgtaacttaaaaaaagtcttgag 38772371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 54625540 - 54625598
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||    
T  54625540 ttgtagtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaa 54625598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 3206261 - 3206212
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||||    
T  3206261 tagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctt 3206212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 6131297 - 6131240
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  6131297 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 6131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 10216196 - 10216163
Alignment:
Q  54 taaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||| ||||||||||||||||||||    
T  10216196 taaaaaagtcttgtggtattcaatcaagactttt 10216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 10225704 - 10225671
Alignment:
Q  54 taaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||| ||||||||||||||||||||    
T  10225704 taaaaaagtcttgtggtattcaatcaagactttt 10225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 12103733 - 12103774
Alignment:
Q  155 gattttgtagtgtaattttaacaagaaaaagtctttcatgaa 196  Q
    |||||| ||||| |||||||||||||| ||||||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 44276300 - 44276357
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||||||| ||| ||||| |||| ||||||||| || |||||||||| ||||||    
T  44276300 gtattcaatcaaaactttttgtaatttaaaaaaagtcatgtggtattcaattaagact 44276357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 1440136 - 1440072
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||| ||| |||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  1440136 aaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 1440072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 6131470 - 6131411
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| ||||||||||||||||||||  || || |||||||||||| | |||||||||||||    
T  6131470 ttgtggtattcaatcaagactcttt-ccaattgaaaaaagtcttgtgttattcaatcaaga 6131411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 39338335 - 39338299
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  39338335 ttttaaaaaagtctttaggtattcaataaagactttt 39338299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 40897090 - 40897154
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| |||||||||||||| | ||||  | || |||||||||||| |||||||| ||||||||    
T  40897090 tcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcattcaagact 40897154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 51699737 - 51699677
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| ||||||||||||||||||||   |||| ||||||||||||   |||||||||||||    
T  51699737 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaaga 51699677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 6224787 - 6224548
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||         
T  6224787 ttttgcaaattaaaaaaagtcatgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaa 6224688  T
Q  101 nn-gtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 199  Q
       ||||  || |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6224687 aaagtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 6224588  T
Q  200 at-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    || ||||||||||| |||||||||||||||||||||||||    
T  6224587 atgagatttcttgatattgtttttcttttaaaagttacta 6224548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 28740522 - 28740275
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  28740522 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 28740423  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || |||||||||||||||||||||||||||||||||||||||||          |||||||||| |||||||||||||||||||||||||||    
T  28740422 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtcttt 28740323  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    ||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  28740322 cataaaaagatgagatttcttgagattgtttttcttttaaaagttact 28740275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 3574818 - 3575049
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| ||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||         
T  3574818 ttttgcaacttaaaaaaagttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 3574917  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 200  Q
      ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| | |||||     
T  3574918 aagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagt 3575017  T
Q  201 t-agatttcttgaaattgtttttcttttaaaa 231  Q
    | ||||||||||| ||||||||||||||||||    
T  3575018 tgagatttcttgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 215464 - 215219
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||         
T  215464 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 215365  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaag--------gattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttca 192  Q
      ||||  || |||||||||||||||||| ||| |||        ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  215364 aagtctcgtggtattcaaaatcattcaaacttcaaaggattgtttgattgtttaataaattggattttgtagtgtaattttaac-agaaaaagtctttca 215266  T
Q  193 tgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  215265 tgaaaagatgagatttcatgagattgtttttcttttaaaagttacta 215219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 13833661 - 13833413
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||         
T  13833661 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaa 13833562  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||||||||||||| ||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  13833561 aagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 13833462  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||| ||||| ||||||||||| |||| ||||||||||||| ||||||    
T  13833461 catgacaagatgagatttcttgagattgcttttcttttaaaaattacta 13833413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 28844526 - 28844781
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  28844526 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 28844625  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    | |||||||||||||||||||| ||||    
T  28844626 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataaga 28844725  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  28844726 aaaagtctttcataaaaagatgagatttcttgagattgtttttcttttaaaagtta 28844781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 33135594 - 33135848
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  33135594 ttttgcaatttaaaaaaagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 33135693  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  33135694 aagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 33135793  T
Q  181 aaaagtctttcatgaaaagatagatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||||||||||||| ||||   ||||||||||| ||||||||||||||||||||||    
T  33135794 aaaagtctttcataaaaaatgagatttcttgagattgtttttcttttaaaagtta 33135848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 7026575 - 7026775
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  7026575 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 7026674  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  7026675 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtcttt 7026774  T
Q  191 c 191  Q
    |    
T  7026775 c 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 3463642 - 3463891
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaaga-ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnn 99  Q
    |||||||| ||||||| |||||| |  ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||        
T  3463642 ttttgcaatttaaaaaaagtcttataatattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaa 3463741  T
Q  100 nnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattgga----------ttttgtagtgtaattttaacaagaaaaagtctt 189  Q
       ||||  || |||| |||||||||||| |||| ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||    
T  3463742 aaagtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctt 3463841  T
Q  190 tcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||| || ||||||||||| ||||||||| |||||||||||||||    
T  3463842 tcatgaaaatatgagatttcttgagattgtttttgttttaaaagttacta 3463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10657377 - 10657635
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||| |||||||||| |||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||         
T  10657377 ttttgaaacttaaaaaaagtcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaa 10657476  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||| ||||||||||||||||                    |||||||||||||||||||||||||||    
T  10657477 aagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 10657576  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| |||||||||||||| | ||||||||| ||||||||||||||||||| |||||    
T  10657577 aaaagtatttcatgaaaagatgaaatttcttgagattgtttttcttttaaaaggtacta 10657635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 10125530 - 10125285
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtc--ttgaggtattcaatcaagacttttcatcacttnnnn 99  Q
    ||||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||        
T  10125530 tttgcaatttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaa 10125431  T
Q  100 nnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctt 189  Q
       ||||  ||||||||||||||||||||||||| |||||||||||||||||||          ||||||| ||||| ||||||||||||||||||||||    
T  10125430 aaagtctcatgatattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtctt 10125331  T
Q  190 tcatgaaaaga-tagatttcttgaaattgtttttcttttaaaagtt 234  Q
    |||| |||| |  ||||||||| | |||||||||||||||||||||    
T  10125330 tcataaaaacacgagatttcttaagattgtttttcttttaaaagtt 10125285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 25288156 - 25288388
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattc 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||  || |||||||||||||||    
T  25288156 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattc 25288255  T
Q  127 aaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agat 205  Q
    |||||||||||||||||||||||||||||||                    ||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  25288256 aaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagat 25288355  T
Q  206 ttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||| |||||||||||||||||||||||||    
T  25288356 ttcttgagattgtttttcttttaaaagttacta 25288388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 238
Target Start/End: Original strand, 18177265 - 18177496
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       || |  || ||||||||||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  128 aatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatt 206  Q
    ||||||||||||||||||||| ||||                    ||||||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  207 tcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| ||||||||| |||||||||||||||    
T  18177465 tcttgagattgtttttattttaaaagttacta 18177496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 26788755 - 26789012
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca--cttnnn 98  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |         
T  26788755 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaa 26788854  T
Q  99 nnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaa 178  Q
        ||||  || ||||||||||||||||||||| ||||||||||||||||||||                    |||||||||||||||||||||||||    
T  26788855 aaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaa 26788954  T
Q  179 gaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||||||||   ||||| ||||||||||| ||||||||| |||||||||||||||    
T  26788955 gaaaaagtctttcat---aagatgagatttcttgagattgtttttattttaaaagttacta 26789012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 378925 - 379156
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| ||||||||||||| ||||||  ||| ||       || |  || ||||||    
T  378925 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattca 379024  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggatt----------ttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatt 206  Q
    ||||||||||||||| |||||||||||||||||||||||||          |||||||||||||||||||||||||| || ||||||||||||| |||||    
T  379025 aaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgagatt 379124  T
Q  207 tcttgaaattgtttttcttttaaaagttacta 238  Q
    | |||| |||||||||||||||||| ||||||    
T  379125 tattgagattgtttttcttttaaaacttacta 379156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 16269671 - 16269822
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  16269671 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 16269770  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  16269771 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 16269822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 24776335 - 24776486
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  24776335 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 24776434  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  24776435 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 24776486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 20605216 - 20605367
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  20605216 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 20605315  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  20605316 ggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttg 20605367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 31170854 - 31170703
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  31170854 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 31170755  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  31170754 ggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttg 31170703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 43847626 - 43847768
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  43847626 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 43847725  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
      |||||||||||||||||||||||||||||||||||||||||    
T  43847726 tgtattcaaaatcattcaaatttcgaaggattgtttaataaat 43847768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 22552002 - 22551850
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||| ||| ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||         
T  22552002 ttttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaa 22551903  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt 153  Q
      ||||| || |||||||||| |||||||||||||| ||||||||| ||||||    
T  22551902 aagtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaatt 22551850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 44765755 - 44765906
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || |||||||       ||||| |    
T  44765755 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagt 44765854  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  44765855 ggtattcaaaatcattcaaatttcgaaagattgtttaataaataagattttg 44765906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 12407363 - 12407511
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || |||||||       ||||| || |    
T  12407363 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggt 12407462  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||| |||||||||||||||||||  |||||||    
T  12407463 attcaaaatcattcaaattttgaaggattgtttaataaatcagattttg 12407511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 14198804 - 14198656
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| ||||||||  ||||||||||| | |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||| | || |    
T  14198804 aaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggt 14198705  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  14198704 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 14198656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 1789422 - 1789573
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||  | ||||||||||| ||| || |||||||       ||||| |    
T  1789422 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagt 1789521  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  1789522 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 1789573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 5093277 - 5093126
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||  || |||||||       ||||| |    
T  5093277 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagt 5093178  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
      ||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  5093177 agtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttg 5093126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 35317042 - 35317193
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||| ||||||||||||   ||||||||||||||| || |||||||       ||||| |    
T  35317042 ttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagt 35317141  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35317142 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 35317193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 305693 - 305553
Alignment:
Q  12 aaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattga 111  Q
    ||||| ||||||||  ||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| ||     
T  305693 aaaaaaagtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 305594  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  305593 tattcaaaatcattcaaattttgaatgattgtttaataaat 305553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 9120123 - 9120257
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattc 126  Q
    ||||||||||||||||||||   ||||||||||||||||| | ||||||||||||| | || |||||||        |||| ||||||||||||||||||    
T  9120123 gtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattc 9120222  T
Q  127 aaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||  ||||||||||||||||||| |||||||    
T  9120223 agattttaaaggattgtttaataaattagattttg 9120257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 26601430 - 26601278
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| ||||  |||| ||||||||||||||||||||  ||||||||||||  |||||||||||||||| || |||||||       |||   |    
T  26601430 ttaaaaaaagttttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgt 26601331  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
    | ||||||||||||||||||||||||| | |||||||||||||  ||||||||    
T  26601330 ggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagattttgt 26601278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 32125230 - 32125384
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttt---tcatcacttnnnnnnngtct 106  Q
    ||||||| ||||||||  ||||||||||| | |||||||||||| ||||||||| || ||||||||||||||||| |   | |||| ||       |||     
T  32125230 ttaaaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtca 32125329  T
Q  107 attgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | || |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  32125330 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 32125384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 43078707 - 43078789
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  43078707 ggattttatagtgtaattttaacatgaaaaagtctttcataaaaagataagatttcttgagattgtttttgttttaaaagtta 43078789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 20605132 - 20605206
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  20605132 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagact 20605206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 7027051 - 7027116
Alignment:
Q  174 aacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 7027116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 7026545 - 7026616
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  7026545 aaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 7026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 26788730 - 26788796
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  26788730 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 26788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 20605174 - 20605246
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||| |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  20605174 ttaaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 20605246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 24776301 - 24776365
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||||||||| | |||| |||||||||||| | |||||||||||||    
T  24776301 agtcttgtggtattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaaga 24776365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 215489 - 215423
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  215489 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 215423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 13833682 - 13833612
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 92  Q
    |||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||||| ||||    
T  13833682 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttttatca 13833612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 19145003 - 19145090
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaaga---ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    ||||||| | |||||| ||||||||||||||   |||||| |||||| ||||||| |||| |||||||||||||||| |||||||||||    
T  19145003 ttaaaaaaaatcttgtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaagac-tttcatcactt 19145090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 28844501 - 28844567
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  28844501 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 28844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 378950 - 379011
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagt 62  Q
    |||||||||||||||| |||||||| |||||||||||| ||| ||| |||||| ||||||||    
T  378950 ttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagt 379011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 12407326 - 12407390
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||| |||||   ||||||||||||||||| | |||||||||||||    
T  12407326 agtcttgtggtattcaatcaagattcttttcaattttaaaaaagtcttgtgttattcaatcaaga 12407390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16269637 - 16269701
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  16269637 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 16269701  T

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Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 20605098 - 20605162
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  20605098 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 20605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 43078653 - 43078693
Alignment:
Q  120 atcattcaaatttcgaaggattgtttaataaattggatttt 160  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggatttt 43078693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 10125545 - 10125490
Alignment:
Q  29 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||||||||||||||  |||| |||||||| ||| |||||||||||||||||    
T  10125545 attcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagact 10125490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 21370678 - 21370631
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 159  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  21370678 tattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 5093309 - 5093247
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  5093309 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 5093247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 14198840 - 14198779
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||||||| |||||||||||||||||||| | | ||||||||||||||| | |||||||||||    
T  14198840 agtcttgtggtattcaatcaagactctttct-aatttaaaaaagtcttgtgttattcaatcaa 14198779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 28740547 - 28740481
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||| ||| ||||  | || |||||||||||| |||||||||||||||||    
T  28740547 agtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 28740481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 32125196 - 32125258
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||    
T  32125196 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaa 32125258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 33135569 - 33135635
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| | |||||||||||||||| ||||  |||| |||||||| ||| |||||||||||||||||    
T  33135569 agtcttatggtattcaatcaagactttttgcaatttaaaaaaagtattgtggtattcaatcaagact 33135635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1789383 - 1789452
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| |||||||| |||||||||||| |||||||   |||| |||||||||||| | |||||||||||||    
T  1789383 aaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 1789452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 31170888 - 31170824
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||||  |||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  31170888 agtcttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 31170824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 35317008 - 35317072
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||| ||| | |||||||||||||    
T  35317008 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 35317072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 44765721 - 44765785
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||| |||||||   |||| |||||||||||| | |||||||||||||    
T  44765721 agtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 44765785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 3574797 - 3574859
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| |||||||||||||||| ||||  | || |||||||| ||| |||||||||||||||||    
T  3574797 ttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 3574859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 8172156 - 8172210
Alignment:
Q  8 acttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagt 62  Q
    |||||| || |||||||| ||||| |||||||||||||||||| || ||||||||    
T  8172156 acttaagaaaagtcttgtggtatttaatcaagactctttgtcacttcaaaaaagt 8172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 14198765 - 14198699
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||  | |||||||||    
T  14198765 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaa 14198699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 26601464 - 26601398
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||| ||||||| | |||| |||||||| ||| | |||| ||||||||||    
T  26601464 agtcttgtggtattcaatcaaaactctttctaatttaaaaaaagttttgtgttatttaatcaagact 26601398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 305730 - 305665
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattt-taaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   ||||  |||||||||||| | |||||||||||||    
T  305730 agtcttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaaga 305665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 12407532 - 12407593
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||| ||||||| || |||||||||||||||||||| || ||||||||| | |||||||||    
T  12407532 tagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 19144965 - 19145033
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| |||||||| |||||||||||| |||| || ||| || |||||| ||||| |||||||||||||||    
T  19144965 aaaaaagtcttgtggtattcaatcaaaactcatt-tcaattaaaaaaaatcttgtggtattcaatcaaga 19145033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 35317214 - 35317275
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||| ||||||| || |||||||||||||||||||| || ||||||||| | |||||||||    
T  35317214 tagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 7026545 - 7026577
Alignment:
Q  55 aaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||||||| ||||||||||||||||||||    
T  7026545 aaaaaagtcttgtggtattcaatcaagactttt 7026577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 10657352 - 10657416
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| ||| ||||||||||||| || ||||  | || |||||||||||| |||||||||||||||    
T  10657352 agtcgtgtggtattcaatcaaggctttttgaaacttaaaaaaagtcttgtggtattcaatcaaga 10657416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 20157795 - 20157759
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  20157795 ttttaaagaagtctttaggtattcaatcaagactttt 20157759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 22552027 - 22551963
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||| | |||   |||| |||||||||||| | |||||||||||||    
T  22552027 agtcttgtggtattcaatcaagattttttccaatttaaaaaaagtcttgtgttattcaatcaaga 22551963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 117)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 17001259 - 17001037
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||         
T  17001259 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaa 17001160  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 200  Q
       | |  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  17001159 aaatatcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattataacaagaaaaagtctttcatgaaaata 17001060  T
Q  201 t-agatttcttgaaattgttttt 222  Q
    | ||||||||||| |||||||||    
T  17001059 tgagatttcttgatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 37327891 - 37328139
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||         
T  37327891 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaa 37327990  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || |||||||||||||||||||||| ||||||||||||||||||          ||||||||||||| |||||||||||| |||||||||||    
T  37327991 aagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtcttt 37328090  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  37328091 catgaaaagataagattttttgagattgtttttcttttaaaagttacta 37328139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 44122136 - 44121888
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  44122136 ttttgcaacttaaaaaaaaatttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 44122037  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
       |||  || |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  44122036 aaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtcttt 44121937  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
     |||||||||| |||||| |||| |||||||||||||||||||||||||    
T  44121936 aatgaaaagatgagattttttgagattgtttttcttttaaaagttacta 44121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 7993106 - 7993364
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||         
T  7993106 ttttgcaacttaaaaaaagtctcgtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaa 7993205  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  7993206 aagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaaga 7993305  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  7993306 aaaagtctttcatgaaaagataagatttcttgagattgtttttcttttaaaagttacta 7993364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 23101262 - 23101520
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  23101262 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 23101361  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  23101362 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 23101461  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  23101462 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 23101520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 29615000 - 29614742
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  29615000 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 29614901  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  |||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  29614900 aagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 29614801  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||    
T  29614800 aaaagtctttcatgaaaagatgagatttcttgagattatttttattttaaaagttacta 29614742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 40460943 - 40460695
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| |||||||  |||||||  |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||         
T  40460943 ttttgcaatttaaaaaatgtcttgtgatattcaattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaa 40460844  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||||||||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||| |||||    
T  40460843 aagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttt 40460744  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||    
T  40460743 catgaaaatatgagatttcttgagattgtttttcttttaaaagttacta 40460695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 28342311 - 28342569
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||         
T  28342311 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaa 28342410  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  28342411 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 28342510  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  28342511 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 28342569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 39028061 - 39028309
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||         
T  39028061 ttttgcaacttaaaaaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaa 39028160  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||| |||||||| |||| |||||||||||||||          ||||||||||||||||| |||||||||||||||| |||    
T  39028161 aagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggattttgtagtgtaactttaacaagaaaaagttttt 39028260  T
Q  191 catg-aaaagatagatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||| |||| | ||||||||||| |||||||||||||||||||||||||    
T  39028261 catgaaaaacagagatttcttgagattgtttttcttttaaaagttacta 39028309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 39784063 - 39784321
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  39784063 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 39784162  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||||||| |||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  39784163 aagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 39784262  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  39784263 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 39784321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 46405667 - 46405419
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||         
T  46405667 ttttgcaacttaaaaaaaatcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 46405568  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || |||||||||||||||||||||| || |||||||||||||||          |||||||||| ||||||||||||||||||||||| |||    
T  46405567 aagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtattt 46405468  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
     || ||||||| ||||||||||| |||||||||||||||||||||||||    
T  46405467 aataaaaagatgagatttcttgagattgtttttcttttaaaagttacta 46405419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 509637 - 509868
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||  || ||||||    
T  509637 agtcttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 509736  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatt 206  Q
    ||||||||||||||||||| |||||||||||||||          ||||||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  509737 aaatcattcaaatttcgaacgattgtttaataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatt 509836  T
Q  207 tcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| ||||||||| |||||||||||||||    
T  509837 tcttgagattgtttttattttaaaagttacta 509868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 3022896 - 3023145
Alignment:
Q  7 aacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtct 106  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||    
T  3022896 aacttaaaaaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtct 3022995  T
Q  107 attgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaagaaaaagt 186  Q
      || ||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||    
T  3022996 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 3023095  T
Q  187 ctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
     |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  3023096 ttttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 3023145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 18838353 - 18838611
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| | | |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||         
T  18838353 ttttgcaacttaaaaaaaatattgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaa 18838452  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||| ||||||||||||||||                    |||||||||||||||||||||||||||    
T  18838453 aagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 18838552  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18838553 aaaagtatttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttacta 18838611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 33382601 - 33382859
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  33382601 ttttgcaacttaaaaaaagccttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 33382700  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||||||| |||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  33382701 aagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 33382800  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||| |||||||||| |||||| || | |||||||||||||||||| ||||||    
T  33382801 aaaagtcttttatgaaaagatgagatttatttagattgtttttcttttaaaatttacta 33382859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 212
Target Start/End: Original strand, 47066679 - 47066880
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnn-gtctattga 111  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||||||||        ||||  ||     
T  47066679 aaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtgg 47066778  T
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||    
T  47066779 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttctt 47066878  T
Q  211 ga 212  Q
    ||    
T  47066879 ga 47066880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 9882472 - 9882218
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  9882472 ttttgcaatttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaa 9882373  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||| ||||||||||||||||                    |||||||||||||||||||||| ||||    
T  9882372 aagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaaga 9882273  T
Q  181 aaaagtctttcatgaaaagatagatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||||||||||||| ||||   ||||||||||| ||||||||||||||||||||||    
T  9882272 aaaagtctttcataaaaaatgagatttcttgagattgtttttcttttaaaagtta 9882218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 28035040 - 28034783
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||         
T  28035040 ttttgcaacttaaaaa-agtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaa 28034942  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||| ||||||||||| |||||||||||||||||||                    ||||||||||||||||||||||||| |    
T  28034941 aagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaa 28034842  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  28034841 aaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttacaagttacta 28034783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 19251504 - 19251663
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||          
T  19251504 tttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaa 19251603  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19251604 agtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 19251663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 29585500 - 29585725
Alignment:
Q  22 ttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaat 121  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||       ||||  || ||||||||||    
T  29585500 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaat 29585598  T
Q  122 cattcaaatttcgaaggattgtttaataaattgga----------ttttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||||||||| ||||||||||||||||| |||||          ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||    
T  29585599 cattcaaattttgaaggattgtttaataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttctt 29585698  T
Q  211 gaaattgtttttcttttaaaagttact 237  Q
    || ||||||||||||||||||||||||    
T  29585699 gagattgtttttcttttaaaagttact 29585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 201
Target Start/End: Complemental strand, 33892460 - 33892276
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattc 126  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||  || |||||||||||||||    
T  33892460 gtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattc 33892361  T
Q  127 aaatttcgaaggattgtttaataaattgg----------attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 201  Q
    |||||||||| ||||||| ||||||||||          |||||||||||||||||||||||||||||||||||||| |||||||    
T  33892360 aaatttcgaatgattgttaaataaattggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagat 33892276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 12963666 - 12963825
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||          
T  12963666 tttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaa 12963765  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     ||||  || ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  12963766 agtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttg 12963825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 32883746 - 32883906
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||         
T  32883746 ttttgcaacttaaaaaaagtcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaa 32883845  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
      ||||  || ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  32883846 aagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttg 32883906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 3797292 - 3797052
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    ||||||| ||||||| |||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  3797292 tttgcaatttaaaaaaagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaa 3797193  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt-----------ggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
     ||||  || ||||||| |||||| |||||| ||||||||||||||||||||           ||||||| ||||| ||||||| || ||||||||||||    
T  3797192 agtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttt 3797093  T
Q  191 catgaaaagatagatttcttgaaattgtttttcttttaaaa 231  Q
     | ||||| |||||||||||   ||||||||||||||||||    
T  3797092 taagaaaacatagatttcttaggattgtttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 12740337 - 12740593
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||| ||         
T  12740337 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaa 12740436  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaa-------------------ttggattttgtagtgtaattttaacaagaa 181  Q
      ||||  || |||||||||||||||||||||| |||||||||||||||||                   | ||||||| |||||||||||||||||||     
T  12740437 aagtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaatggattttgatagattttgtgggattttatagtgtaattttaacaagag 12740536  T
Q  182 aaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    |||||||||||| ||||||| ||||||||| | |||||||| |||||||||||||||    
T  12740537 aaagtctttcataaaaagatgagatttcttaagattgttttacttttaaaagttact 12740593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 30 - 230
Target Start/End: Original strand, 8675326 - 8675547
Alignment:
Q  30 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaa 129  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||  || |||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  130 tttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttc 208  Q
     |||||||||||||||||||||||                    ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  209 ttgaaattgtttttcttttaaa 230  Q
    |||| |||||||||||||||||    
T  8675526 ttgagattgtttttcttttaaa 8675547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 44257002 - 44256844
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||||||| | |||| |||||||| ||||| |||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||         
T  44257002 ttttgcaaccttaaaaaagtcttgtagtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaa 44256903  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 159  Q
      || |  || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44256902 aagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattt 44256844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 10068431 - 10068583
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtc-ttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    ||||||| ||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||         
T  10068431 tttgcaatttaaaaaaagtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaa 10068530  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt 153  Q
      ||||  || ||||||||||||||||||||| ||||||||||||||||||||    
T  10068531 aagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatt 10068583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 47914249 - 47914397
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| ||||||||  ||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||| || |||||||       ||||| ||||    
T  47914249 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgat 47914348  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  47914349 attcaaaatcattcaaatttcgaaggattgtttaataaataagattttg 47914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 30440776 - 30440927
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || |||||||       ||||| |    
T  30440776 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 30440875  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  30440876 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 30440927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 43581317 - 43581166
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||||||       ||||| |    
T  43581317 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagt 43581218  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  43581217 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 43581166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 41827278 - 41827526
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||         
T  41827278 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaa 41827377  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattt--------------------tgtagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||          | ||||||||||||||||||||||||||                    |||||||||||||||||||||    
T  41827378 aagtcttgtggtattcaaaat----------ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaaga 41827467  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||| |||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  41827468 aaatgtctttcatgaaaatatgagatttcttgagattgtttttcttttaaaagttacta 41827526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 10676637 - 10676498
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtct-attgatattcaa 118  Q
    |||||| ||||| |||||||||||||||  |||| ||||| |||||| ||||||||||||||||||||||||||||       |||| |||| |||||||    
T  10676637 tcttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattg-tattcaa 10676539  T
Q  119 aatcattcaaatttcgaaggattgtttaataaattggattt 159  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10676538 aatcattcaaatttcgaaggattgtttaataaattggattt 10676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 12893388 - 12893539
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||| || |||||||       ||||| |    
T  12893388 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaat 12893487  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  12893488 ggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 12893539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 40996876 - 40996725
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||| ||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || ||| |||       ||||| |    
T  40996876 ttaaaaaaagtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagt 40996777  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  40996776 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 40996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 47879151 - 47879299
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| ||||||||  ||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||| || |||||||       ||||| ||||    
T  47879151 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgat 47879250  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||  ||||||||||||||||||  |||||||    
T  47879251 attcaaaatcattcaaatttaaaaggattgtttaataaatcagattttg 47879299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 973164 - 973315
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||        | || |    
T  973164 ttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagt 973263  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  973264 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 973315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 44343623 - 44343472
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||| || |||||||       || || |    
T  44343623 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagt 44343524  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  44343523 ggtatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 44343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 44623485 - 44623351
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||       ||||  |||||||||||||||||||    
T  44623485 tattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattca 44623386  T
Q  128 aatttcgaaggattgtttaataaattggattttgt 162  Q
     ||||| || || |||||||||||||| |||||||    
T  44623385 tatttctaaagactgtttaataaattgaattttgt 44623351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 34008992 - 34009144
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngt-ctat 108  Q
    ||||||| ||||||||  ||||||||||||| | |||||||||| |||||||||||| ||||||||||||| ||| || |||||||       || |||     
T  34008992 ttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctag 34009091  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    || |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  34009092 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 34009144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48117829 - 48117746
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  48117829 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 7719487 - 7719336
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||| | | |||||||||| |||||||||||| ||||||||||||||||| || |||||||        |||| |    
T  7719487 ttaaaaaaagtcttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagt 7719388  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  7719387 ggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 7719336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 20275490 - 20275339
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| |||||||   ||||||||||||| || ||||||||| |||||||||||  ||||||||||||||||| || |||||||       ||||  |    
T  20275490 ttaaaaaaagtcttgggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttat 20275391  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  20275390 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 20275339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 34695253 - 34695404
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| || ||||||||| |||||||| ||| ||||||||||||||||| || |||||||       ||| | |    
T  34695253 ttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagt 34695352  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  34695353 ggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttg 34695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 29893062 - 29893139
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  29893062 agtcttgtggtattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcactt 29893139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 18914959 - 18914811
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgat 112  Q
    |||| ||||||||  ||||||||||| | |||||||| ||| |||||||||||| ||||||||||||||||| || |||||||       ||||| || |    
T  18914959 aaaaaagtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 18914860  T
Q  113 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||| |||| |||||||||||||  |||||||    
T  18914859 attcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttg 18914811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 31638855 - 31639006
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||| | |||||||||||| |||||| |  || ||||||| ||||||||| || |||||||       ||||| |    
T  31638855 ttaaaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagt 31638954  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  31638955 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 31639006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 37972930 - 37972848
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  37972930 ggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagacttcttgagattgtttttcttttaaaagtta 37972848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 9179871 - 9180005
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||| |||||||||||| |||||||| |||  |||||||||||||||| ||||||||||       ||||  || ||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  128 aatttcgaaggattgtttaataaattggattttgt 162  Q
    |||| ||||||||||||||||||||||||||||||    
T  9179971 aattccgaaggattgtttaataaattggattttgt 9180005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 7718549 - 7718438
Alignment:
Q  50 attttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaata 149  Q
    |||| |||||||||||| ||||||||||||||||| || |||||||       ||||| || ||||||||||||||||||||||||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  150 aattggattttg 161  Q
    |||  |||||||    
T  7718449 aatcagattttg 7718438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 727492 - 727645
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctat 108  Q
    ||||||| ||||||||  ||||||||||| | |||||||||||| |||||||||||| | ||||||||||| ||| || |||||||         ||||     
T  727492 ttaaaaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctag 727591  T
Q  109 tgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
    |  |||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  727592 tagtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgt 727645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 39219596 - 39219453
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattc 116  Q
    |||||||| ||||||||||||||||||||   |||| |||||| |||||| | ||||||||||||||| || |||||||       |||||||| |||||    
T  39219596 agtcttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattc 39219497  T
Q  117 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||| | | |||||||||||||||  |||||||    
T  39219496 aaaatcattcaaattttg-atgattgtttaataaatcagattttg 39219453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 25805665 - 25805809
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| | |||||| | |||||||||||| ||||||| |||| |||||| ||| | ||||||||||||| | ||||||||||||          |  |    
T  25805665 ttaaaaaaaatcttgtggcattcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgt 25805764  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattg 154  Q
    | ||||||||||||||||||||||| |||||||||||||||||||    
T  25805765 ggtattcaaaatcattcaaatttcgtaggattgtttaataaattg 25805809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 43187420 - 43187339
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtt 234  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| | || |||||| |||  |||||||||||||||||||||    
T  43187420 ggattttctagtgaaattttaacaagaaaaagtctttcatgaagacatgagattttttgggattgtttttcttttaaaagtt 43187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 44256820 - 44256747
Alignment:
Q  163 agtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    |||||||||||||||||||||||| |||||| |||| || |||||| |||| ||||||||||||||||||||||    
T  44256820 agtgtaattttaacaagaaaaagtttttcatcaaaatatgagattttttgagattgtttttcttttaaaagtta 44256747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 43187608 - 43187545
Alignment:
Q  14 aaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 77  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||||||||  ||||||||||    
T  43187608 aaagagtcttgtggtattcaatcaagactctttgtaatttaaaaaaagtcttatggtattcaat 43187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 19251478 - 19251544
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||||||||  | || |||||||||||| |||||||||||||||||    
T  19251478 agtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagact 19251544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 19810874 - 19810924
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgt 19810924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 29615025 - 29614959
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  29615025 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 29614959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 34695177 - 34695243
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| |||||||||||||||||    
T  34695177 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 34695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 7113436 - 7113583
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  |||||||| |||| | ||| |||||| |||||||| ||| ||||||||||    |||||| |||||||       ||| | |    
T  7113436 ttaaaaaaagtcttgtgttattcaattaagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagt 7113531  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||| |||||||||||| |||||||||||||||||  |||||||    
T  7113532 ggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttg 7113583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 10616914 - 10617006
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    ||||||| ||||||| ||| ||||  |||||||| |||| | ||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||    
T  10616914 tttgcaatttaaaaaaagttttgtaatattcaat-aagattatttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatcactt 10617006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 43187482 - 43187433
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  43187482 tattcaaaatcattcaaattttgaagcattgtttaataaattggattttg 43187433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 43679496 - 43679545
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  43679496 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 43679545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 34695211 - 34695283
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||| |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  34695211 ttaaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 34695283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 12963640 - 12963706
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| ||| |||||||||||||||||  | || |||||||||||| |||||||||||||||||    
T  12963640 agtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagact 12963706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 17001284 - 17001218
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  17001284 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 17001218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 18914996 - 18914934
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||||||| ||||||||||||||||||||   ||||||||||||||||| | |||||||||||    
T  18914996 agtcttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaa 18914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 23101237 - 23101303
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  23101237 agtcttgtggtattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 23101303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 28342286 - 28342352
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||| | ||||  |||| |||||||||||| |||||||||||||||||    
T  28342286 agtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 28342352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 37327866 - 37327932
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  37327866 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 37327932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 39784038 - 39784104
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| ||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  39784038 agtcatgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 39784104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 48117854 - 48117788
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  48117854 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 48117788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 447858 - 447907
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  447858 tatttaaaatcattcaaatttcgaatgattgtttaattaattggattttg 447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 32143146 - 32142993
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt--nnnnnnngtcta 107  Q
    ||||||| ||||||||  |||||||| ||   | |||||||||| |||||||||||  |||||| |||||||||| || |||||||         |||      
T  32143146 ttaaaaaaagtcttgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcac 32143047  T
Q  108 ttgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     || ||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttg 32142993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 41827253 - 41827322
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||| |||||||||||||| | ||||  | || |||||||||||| ||||||||||||||||||||    
T  41827253 agtcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttt 41827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 12893354 - 12893418
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  12893354 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 12893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 40996914 - 40996846
Alignment:
Q  14 aaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||||||| ||||||||||||||||||||   |||| |||||||||| | | |||||||||||||    
T  40996914 aaagagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctcgtgttattcaatcaaga 40996846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 43581351 - 43581287
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  43581351 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 43581287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 44343657 - 44343593
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  44343657 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 44343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 47879114 - 47879178
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||| |||||||   ||||||||||||||||| | |||||||||||||    
T  47879114 agtcttgtggtattcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaaga 47879178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 47914212 - 47914276
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||| |||||||   ||||||||||||||||| | |||||||||||||    
T  47914212 agtcttgtggtattcaatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaaga 47914276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 7718547 - 7718481
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  7718547 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7718481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 7993081 - 7993147
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||| | |||||||||||||||||    
T  7993081 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctcgtggtattcaatcaagact 7993147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 9882497 - 9882431
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| | |||||||||||||||| ||||  |||| |||||||| ||| |||||||||||||||||    
T  9882497 agtcttatggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaatcaagact 9882431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 10068405 - 10068471
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||||  ||||||||||| ||||||||  |||| |||||||||||| |||||| ||||||||||    
T  10068405 agtcttgtgatattcaatcaaaactctttgcaatttaaaaaaagtcttgtggtatttaatcaagact 10068471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 18914920 - 18914854
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  18914920 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 18914854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 30440744 - 30440806
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  30440744 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 30440806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 37972981 - 37972943
Alignment:
Q  123 attcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttg 37972943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 39028036 - 39028102
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||| ||||| |||||||||||||||||    
T  39028036 agtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagact 39028102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 8078393 - 8078450
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaa-agtcttgaggtattcaatcaagact 84  Q
    ||||||||||||| |||||||||||| ||||| | ||||| |||||||||||||||||    
T  8078393 tattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagact 8078450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 973130 - 973194
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||| ||| | |||||||||||||    
T  973130 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagttttgtgttattcaatcaaga 973194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 1470441 - 1470377
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 92  Q
    |||||||| |||||| |||||||||| |||||||||||| | ||||||||  | |||||||||||    
T  1470441 tattcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatca 1470377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 20275524 - 20275460
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| |||||||||||||| |||||   |||| |||||||||||| | |||||||||||||    
T  20275524 agtcttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgggttattcaatcaaga 20275460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 43187570 - 43187518
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagt 62  Q
    ||||||| |||||| | ||||||||| || |||||||||||||||||||||||    
T  43187570 ttaaaaaaagtcttatggtattcaattaaaactctttgtcattttaaaaaagt 43187518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 509674 - 509737
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    |||| |||||||  |||||||||||||||| ||  |||||| |||||||||||| |||||||||    
T  509674 aaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 509737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 32143180 - 32143121
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 77  Q
    ||||||||  ||||||||||||||||||| | |||| |||||||||||| | ||||||||    
T  32143180 agtcttgtgatattcaatcaagactctttctaatttaaaaaaagtcttgtgttattcaat 32143121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 34008967 - 34009022
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  34008967 gtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 34009022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 727458 - 727520
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||||||  ||||||||||||||||||||   |||| |||||||||||| | |||||||||||    
T  727458 agtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaa 727520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 9179895 - 9179957
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtat 72  Q
    ||||||| ||| |||| |||||||||||||||||||  ||| || |||||||||||| |||||    
T  9179895 ttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtat 9179957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 29893173 - 29893207
Alignment:
Q  204 atttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||| |||||||||||||||||||||||||    
T  29893173 atttcttgagattgtttttcttttaaaagttacta 29893207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 31638821 - 31638883
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    |||| ||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||    
T  31638821 agtcatgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaa 31638883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 33382576 - 33382642
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| | |||||||||||||||| ||||  | || ||||||| |||| |||||||||||||||||    
T  33382576 agtcttatggtattcaatcaagactttttgcaacttaaaaaaagccttgtggtattcaatcaagact 33382642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 46405692 - 46405626
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||| ||| |||||||||||||||| ||||  | || |||||| ||||| |||||||||||||||||    
T  46405692 agtcatgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgcggtattcaatcaagact 46405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 973336 - 973385
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||| ||||||| ||||||||||||||||||||||| || |||||||||    
T  973336 tagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctt 973385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 3797309 - 3797252
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||||||||||||||||  |||| ||||||||| |  | |||||||||||||||    
T  3797309 gtattcaatcaagactctttgcaatttaaaaaaagtcatctgatattcaatcaagact 3797252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 7113411 - 7113476
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 92  Q
    ||||||||||||||||||||   |||| |||||||||||| | |||||||| |||| |||| ||||    
T  7113411 gtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattttttatca 7113476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 8078336 - 8078405
Alignment:
Q  13 aaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| |||||||| ||||||||||||||||||||   |||||||||||   ||| | |||||||||||||    
T  8078336 aaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaaaatttgtgttattcaatcaaga 8078405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 18838329 - 18838394
Alignment:
Q  19 gtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||||| |||||||||||||||| ||||  | || |||||| | ||| |||||||||||||||||    
T  18838329 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatattgtggtattcaatcaagact 18838394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 32883919 - 32883948
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaa 183  Q
    ||||||||||||||||||||||||||||||    
T  32883919 ggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 32883944 - 32883989
Alignment:
Q  194 gaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||    
T  32883944 gaaaagatgagatttattgagattgtttttcttttaaaagttacta 32883989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #113
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 47879320 - 47879381
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||| ||||||| || |||||||||||||||||||| || ||||||||| | |||||||||    
T  47879320 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #114
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 47914418 - 47914479
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgttttt 222  Q
    ||||| ||||||| || |||||||||||||||||||| || ||||||||| | |||||||||    
T  47914418 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #115
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 33892261 - 33892225
Alignment:
Q  202 agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  33892261 agatttcttgagattatttttcttttaaaagttacta 33892225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #116
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 39301283 - 39301247
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  39301283 ttttaaaaaagtctttaggtatttaatcaagactttt 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #117
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 44257018 - 44256958
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||||||||||||| ||||  |  ||||||||||||||  ||||| |||||||||||||    
T  44257018 gtattcaatcaagactttttgcaaccttaaaaaagtcttgtagtatttaatcaagactttt 44256958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 30385293 - 30385047
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||         
T  30385293 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaa 30385194  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtcttt 190  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||  | |||||||||    
T  30385193 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaaca--acaaagtcttt 30385096  T
Q  191 catgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  30385095 catgaaaagatgagatttcttgagattgtttttcttttaaaaattacta 30385047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 31895665 - 31895923
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||         
T  31895665 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaa 31895764  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg--------------------tagtgtaattttaacaaga 180  Q
      ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||    
T  31895765 aagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaaga 31895864  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  31895865 aaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 31895923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 14262669 - 14262412
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||         
T  14262669 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaa 14262570  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
      ||||  || |||||||||||||| |||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  14262569 aagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 14262470  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttact 237  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  14262469 aaaagtctttcatgaaaagatgggatttcttgagattgtttttcttttaaaagttact 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 34759287 - 34759028
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaa-aaaagtcttgaggtattcaatcaagacttttcatcacttnnnn 99  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||        
T  34759287 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaa 34759188  T
Q  100 nnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaag 179  Q
       ||||  || |||||||||||||||||||||| |||||||||||||||||||                    ||||||||||||||||||||||||||    
T  34759187 aaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaag 34759088  T
Q  180 aaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||    
T  34759087 aaaaaatctttcatgaaaagatgagatttcttgagattatttttcttttaaaagttacta 34759028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 34773378 - 34773538
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         
T  34773378 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 34773477  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
       |||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34773478 aaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 34773538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 7051815 - 7051974
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    ||||||||||||||| |||||||| |||| | ||||||| |||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||          
T  7051815 tttgcaacttaaaaaaagtcttgtggtatacgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaa 7051914  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7051915 agtcgtgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 7051974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 7497071 - 7497302
Alignment:
Q  27 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattc 126  Q
    ||||||||||||||||  |||  | || |||||||||||| ||||||||||||||| ||||||||||||       ||||  || |||||||||||||||    
T  7497071 gtattcaatcaagacttgttgcaacttaaaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattc 7497170  T
Q  127 aaatttcgaaggattgtttaataaattgga-------------------ttttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatt 206  Q
    ||||||||||||| ||||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7497171 aaatttcgaaggagtgtttaataaattggattttgatggattttgtggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 7497270  T
Q  207 tcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| ||| |||||||||||||||||||||    
T  7497271 tcttgagattatttttcttttaaaagttacta 7497302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 6197705 - 6197554
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  6197705 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 6197606  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  6197605 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 6197554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 31067573 - 31067710
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  31067573 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagat 31067672  T
Q  202 -agatttcttgaaattgtttttcttttaaaagttacta 238  Q
     ||||||||||| ||||||||| |||||||||||||||    
T  31067673 gagatttcttgagattgtttttattttaaaagttacta 31067710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 2300965 - 2300814
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  2300965 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctact 2300866  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  2300865 ggtattgaaaatcattcaaatttcgaaggattgtttaataaataagattttg 2300814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 4200541 - 4200415
Alignment:
Q  123 attcaaatttcgaaggattgtttaataaattggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttg 211  Q
    |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 4200442  T
Q  212 aaattgtttttcttttaaaagttacta 238  Q
    | ||||||||| |||||||||||||||    
T  4200441 agattgtttttattttaaaagttacta 4200415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 28002643 - 28002794
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| | |||||||||| |||||||||||  ||||||||||||||||| || |||||||       ||||| |    
T  28002643 ttaaaaaaagtcttgtcttattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagt 28002742  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  28002743 gatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttg 28002794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 1391602 - 1391753
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| || ||||||||| || ||||||||| ||||||||||||||||| || |||||||       ||||| |    
T  1391602 ttaaaaaaagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagt 1391701  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | ||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  1391702 ggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttg 1391753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 29076584 - 29076728
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnnnnngtctattgatattc 116  Q
    ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || |||||||        ||||| |  |||||    
T  29076584 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattc 29076683  T
Q  117 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||||||||||||||||||||||||  |||||||    
T  29076684 aaaatcattcaaatttcgaaggattgtttaataaatcagattttg 29076728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 29111557 - 29111702
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt--nnnnnnngtctattgatatt 115  Q
    ||||||||  ||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || |||||||         ||||| |  ||||    
T  29111557 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtatt 29111656  T
Q  116 caaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||||||||||||||||||||||||||  |||||||    
T  29111657 caaaatcattcaaatttcgaaggattgtttaataaatcagattttg 29111702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 3848183 - 3848340
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnn 101  Q
    ||||||| ||||||| | |||||| |||||||||||| ||| |||||||||| ||| |||| ||| |||| |||||||||||  ||||||||||          
T  3848183 tttgcaaattaaaaa-attcttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagac--ttcatcacttaaaaaa 3848279  T
Q  102 ngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgt 162  Q
     || |  || |||||||||||||| |||||| ||| ||||||||||||||||| |||||||    
T  3848280 agttttgtggtattcaaaatcatttaaattttgaatgattgtttaataaattgaattttgt 3848340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 656962 - 657065
Alignment:
Q  28 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattca 127  Q
    ||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||| || |||||||       ||||| || ||||| ||||||||||    
T  656962 tattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattca 657060  T
Q  128 aattt 132  Q
    |||||    
T  657061 aattt 657065  T

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Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 31895640 - 31895706
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  31895640 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 31895706  T

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Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 34773353 - 34773419
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  34773353 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 34773419  T

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Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 34773560 - 34773608
Alignment:
Q  163 agtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34773560 agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 7497089 - 7497162
Alignment:
Q  3 ttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    |||||||||||||| |||||||| |||||||||||||| | ||  ||| || |||||||||||| |||||||||    
T  7497089 ttgcaacttaaaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 7497162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 1391568 - 1391632
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  1391568 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 1391632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 2300999 - 2300935
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  2300999 agtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 2300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 3848134 - 3848225
Alignment:
Q  2 tttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcatt------ttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||| |||||||||||| | | |||||||||      |||||||| ||||| ||||||||||||| ||||||    
T  3848134 tttgcaacttaaaaaaagtcttgtggtattcaatcaatattttttgtcatttgcaaattaaaaaattcttgtggtattcaatcaaaactttt 3848225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 656985 - 657049
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattc 74  Q
    ||||||| |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||    
T  656985 ttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 657049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 6197739 - 6197675
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||| ||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  6197739 agtcgtgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 6197675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 14262692 - 14262628
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| |||||||||||||| | ||||  | || |||||||||||| |||||||||||||||||    
T  14262692 tcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 14262628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  51 ttttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 28002611 - 28002678
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    |||||| ||||||||||||||||||||   |||| ||||||||||||   ||||||||||||| ||||    
T  28002611 tcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttt 28002678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 3848108 - 3848170
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 80  Q
    ||||| || |||||||||||||| ||||||  | || |||||||||||| |||||||||||||    
T  3848108 agtctggtggtattcaatcaagattctttgcaacttaaaaaaagtcttgtggtattcaatcaa 3848170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 7051789 - 7051853
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||||  ||||||||||||||||||||  | || |||||||||||| ||||| | |||||||    
T  7051789 agtcttgtgatattcaatcaagactctttgcaacttaaaaaaagtcttgtggtatacgatcaaga 7051853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 29076542 - 29076606
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||||  |||||||||||||||||||   |||| || ||||||||| | |||||||||||||    
T  29076542 agtcttgtgatattcaatcaagactctttccaatttaaataaagtcttgtgttattcaatcaaga 29076606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 29111515 - 29111579
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    ||||||||  |||||||||||||||||||   |||| || ||||||||| | |||||||||||||    
T  29111515 agtcttgtgatattcaatcaagactctttccaatttaaataaagtcttgtgttattcaatcaaga 29111579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 13869 - 14100
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||  || ||||||    
T  13869 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 13968  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatt 206  Q
    |||||||||||||||| || |||||||||||||||          ||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||    
T  13969 aaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatt 14068  T
Q  207 tcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| |||||||||||||||||||||||||    
T  14069 tcttgagattgtttttcttttaaaagttacta 14100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 21458 - 21227
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||  || ||||||    
T  21458 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 21359  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatt 206  Q
    |||||||||||||||| || |||||||||||||||          ||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||    
T  21358 aaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatt 21259  T
Q  207 tcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||| |||||||||||||||||||||||||    
T  21258 tcttgagattgtttttcttttaaaagttacta 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 28483 - 28570
Alignment:
Q  153 tggattttg-tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  28483 tggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttacta 28570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10530 - 10788
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||         
T  10530 ttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaa 10629  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaga 180  Q
       |||  || |||||||||||||||||||||| |||||||||||||||||||                    |||||||||||||||||||||||||||    
T  10630 aaatcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaaga 10729  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  10730 aaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttacta 10788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 10505 - 10571
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  10505 agtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 10571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 39854 - 39596
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||| ||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||         
T  39854 ttttacaacttaaaaaaagttttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaa 39755  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg--------------------tagtgtaattttaacaaga 180  Q
      |||   || |||||||||||||||||| ||||||||||| |||||||||||||||||||                    |||||||||||||||||||    
T  39754 atgtcatgtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaga 39655  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  39654 aaaagtctttcatgaaaagataagatttcttgagattgtttttcttttaaaagttacta 39596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 39879 - 39813
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| |||   | || |||||||| ||| |||||||||||||||||    
T  39879 agtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatcaagact 39813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 104; Significance: 6e-52; HSPs: 3)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 4170 - 4330
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnn 100  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||         
T  4170 ttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa 4269  T
Q  101 nngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
      ||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4270 aagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttg 4330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 4145 - 4211
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  4145 agtcttgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagact 4211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 4135 - 4172
Alignment:
Q  50 attttaaaaaagtcttgaggtattcaatcaagactttt 87  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  4135 attttgaaaaagtcttgtggtattcaatcaagactttt 4172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 833 - 1088
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-nnnn 99  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||         
T  833 ttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaa 932  T
Q  100 nnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataaa-------------------ttggattttgtagtgtaattttaacaaga 180  Q
       ||||  || |||||||||||||||||||||||||| ||| |||||||||                   | ||||||||||||||||||||||| |||    
T  933 aaagtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaatagattttgatggattttgtgggattttgtagtgtaattttaactaga 1032  T
Q  181 aaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||||||||||| |||| || ||||||||||| |||||||   |||||||||||||||    
T  1033 aaaagtctttcattaaaatatgagatttcttgagattgttt---ttttaaaagttacta 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 810 - 874
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    |||||| |||||||||||||||| ||||  | || |||||||||||| |||||||||||||||||    
T  810 tcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 15261 - 15110
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||||||       ||||| |    
T  15261 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagt 15162  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  15161 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 15110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 15293 - 15231
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  15293 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 15231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 15904 - 15753
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||||||       ||||| |    
T  15904 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagt 15805  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  15804 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 15753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 15936 - 15874
Alignment:
Q  20 tcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  15936 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 15874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 39115 - 38972
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattca 117  Q
    |||||||| |||||||||||||| ||||| |||||| |||||||||||| |||||||||| |||||| || |||||||       ||||| |||||||||    
T  39115 agtcttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattca 39016  T
Q  118 aaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    ||||||||||||||| |||||||||||||||||||  |||||||    
T  39015 aaatcattcaaatttggaaggattgtttaataaatcagattttg 38972  T

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Target: scaffold0037 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 100190 - 100332
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||||| |||| |||||||||||| || |||||||       ||||| |    
T  100190 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagt 100289  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
    | |||||||||||||||||||||| ||||||||||||||||||    
T  100290 ggtattcaaaatcattcaaatttcaaaggattgtttaataaat 100332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 100362 - 100411
Alignment:
Q  162 tagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  100362 tagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 14903 - 14988
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  14903 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttcttttaaaagttacta 14988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 58296 - 58055
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt-catcacttnnnnnnngtctattgatattc 116  Q
    |||||||| |||||||||||||||| |||| ||  |||||||||||||| |||||||| ||||||||||| ||||||||       ||    || |||||    
T  58296 agtcttgtggtattcaatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattc 58198  T
Q  117 aaaatcattcaaatttcgaaggattgtttaataaattggattttg--------------------tagtgtaattttaacaagaaaaagtctttcatgaa 196  Q
    |||||||||||||||||||| ||||||||||||||||||||||||                    |||| |||||||||||||| ||| |||||||||||    
T  58197 aaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaa 58098  T
Q  197 aagat-agatttcttgaaattgtttttcttttaaaagttacta 238  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  58097 aagatgagatttcttgagattgtttttcttttaaaagttacta 58055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 67; Significance: 8e-30; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 233707 - 233801
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| |||||    
T  233707 ttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacactt 233801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 234555 - 234649
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| |||||    
T  234555 ttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacactt 234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 222539 - 222633
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 95  Q
    |||||||||| | ||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||| |||||    
T  222539 ttttgcaactaagaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacactt 222633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 233685 - 233748
Alignment:
Q  21 cttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||| |||||||||||||||| ||||  | ||  ||||||||||| |||||||||||||||||    
T  233685 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagact 233748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 234533 - 234596
Alignment:
Q  21 cttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 84  Q
    ||||| |||||||||||||||| ||||  | ||  ||||||||||| |||||||||||||||||    
T  234533 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagact 234596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 102072 - 102225
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaag--tcttgaggtattcaatcaagacttttcatcacttnnnnnnngtcta 107  Q
    ||||||| ||| ||||  ||||||||||||| |||||||||||| |||||||  ||||| ||||||||||||||||| || |||||||       |||||    
T  102072 ttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtcta 102171  T
Q  108 ttgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
     || ||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  102172 gtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttg 102225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 767 - 625
Alignment:
Q  10 ttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctatt 109  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||| ||| ||||||||||||| ||| || |||||||        | || |    
T  767 ttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagt 668  T
Q  110 gatattcaaaatcattcaaatttcgaaggattgtttaataaat 152  Q
    | ||||||||||||||||||||| |||||||||||||||||||    
T  667 ggtattcaaaatcattcaaatttggaaggattgtttaataaat 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 801 - 737
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 82  Q
    |||||||| ||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  801 agtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaaga 737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 3756 - 3671
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga-tagatttcttgaaattgtttttcttttaaaagttacta 238  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||| || |||| |||| |||||||||||||||||||||||||    
T  3756 ggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgagattgtttttcttttaaaagttacta 3671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 36971 - 36892
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttcttgaaattgtttttcttttaaaagtta 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||   |||||||||||||||    
T  36971 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattg---ttcttttaaaagtta 36892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 37085 - 37027
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37085 agtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 37033 - 36984
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  37033 tattcaaaatcattaaaatttcgaagcattgtttaataaattggattttg 36984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 38786 - 38692
Alignment:
Q  56 aaaaagtcttgaggtattcaatcaagacttttcatcacttnnnnnnngtctattgatattcaaaatcattcaaatttcgaaggattgtttaataa 150  Q
    ||||||||||| ||||||||||||||||| || |||||||       ||||| || |||||||||||||||||||||||||||||||||||||||    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa 38692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 38782 - 38724
Alignment:
Q  18 agtcttgttgtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 76  Q
    |||||||| |||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  38782 agtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 38724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 38669 - 38612
Alignment:
Q  154 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-agatttctt 210  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  38669 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 38612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8732 - 8793
Alignment:
Q  1 ttttgcaacttaaaaagagtcttgttgtattcaatcaagactctttgtcattttaaaaaagt 62  Q
    |||| ||| ||||||| ||||||||  |||| |||||||| |||||||||||| ||||||||    
T  8732 tttttcaatttaaaaaaagtcttgtgttatttaatcaagattctttgtcatttaaaaaaagt 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 199906 - 199955
Alignment:
Q  112 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 161  Q
    |||| |||||||||||||||| ||| || |||||||||||||| ||||||    
T  199906 tatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttg 199955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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