View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10991_high_5 (Length: 202)

Name: NF10991_high_5
Description: NF10991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10991_high_5
NF10991_high_5
[»] chr7 (37 HSPs)
chr7 (18-184)||(16449629-16449795)
chr7 (18-185)||(16041668-16041835)
chr7 (22-181)||(26485043-26485202)
chr7 (22-181)||(26682635-26682794)
chr7 (22-181)||(39210658-39210817)
chr7 (22-181)||(2775708-2775867)
chr7 (26-181)||(4200896-4201051)
chr7 (26-181)||(2108644-2108799)
chr7 (26-184)||(31088103-31088261)
chr7 (26-184)||(45733806-45733964)
chr7 (18-182)||(10916499-10916663)
chr7 (18-182)||(2154921-2155085)
chr7 (28-180)||(5128342-5128494)
chr7 (18-182)||(16503011-16503175)
chr7 (18-182)||(16518047-16518211)
chr7 (28-182)||(11424418-11424571)
chr7 (19-182)||(26435605-26435768)
chr7 (19-182)||(26537502-26537665)
chr7 (19-182)||(16736092-16736255)
chr7 (19-182)||(16751146-16751309)
chr7 (19-182)||(17523880-17524043)
chr7 (19-182)||(17529172-17529335)
chr7 (19-181)||(26513130-26513292)
chr7 (19-180)||(5146972-5147133)
chr7 (46-186)||(31125264-31125404)
chr7 (19-182)||(3445654-3445817)
chr7 (19-184)||(31564022-31564187)
chr7 (37-184)||(18541145-18541292)
chr7 (19-182)||(24592173-24592336)
chr7 (19-182)||(26319501-26319664)
chr7 (19-184)||(5159865-5160030)
chr7 (81-182)||(11441920-11442021)
chr7 (46-182)||(26669573-26669709)
chr7 (19-182)||(4144755-4144918)
chr7 (19-182)||(9618999-9619162)
chr7 (19-182)||(26274726-26274889)
chr7 (19-182)||(45387691-45387854)
[»] chr5 (50 HSPs)
chr5 (18-185)||(22888823-22888990)
chr5 (18-184)||(25199383-25199549)
chr5 (22-181)||(33877604-33877763)
chr5 (19-184)||(29888725-29888890)
chr5 (26-184)||(11326148-11326306)
chr5 (26-184)||(13184299-13184456)
chr5 (26-184)||(13440144-13440302)
chr5 (26-182)||(9548193-9548349)
chr5 (19-184)||(23892560-23892725)
chr5 (18-184)||(24687799-24687965)
chr5 (18-182)||(22998756-22998920)
chr5 (18-182)||(23717630-23717794)
chr5 (28-182)||(33777843-33777997)
chr5 (18-182)||(30934989-30935153)
chr5 (19-182)||(18500373-18500536)
chr5 (28-182)||(23752102-23752256)
chr5 (29-182)||(11549710-11549863)
chr5 (18-182)||(15658402-15658566)
chr5 (18-181)||(24970375-24970538)
chr5 (25-184)||(41675063-41675222)
chr5 (19-182)||(6874661-6874824)
chr5 (19-182)||(43078608-43078771)
chr5 (19-182)||(28649591-28649754)
chr5 (19-182)||(2511407-2511570)
chr5 (19-182)||(3789897-3790060)
chr5 (19-182)||(13324472-13324635)
chr5 (19-182)||(31826050-31826213)
chr5 (18-182)||(18375054-18375218)
chr5 (19-182)||(5638266-5638429)
chr5 (19-182)||(12132511-12132674)
chr5 (19-182)||(24681796-24681959)
chr5 (19-182)||(24724323-24724486)
chr5 (19-182)||(30029771-30029934)
chr5 (46-184)||(37770657-37770795)
chr5 (19-184)||(37358286-37358451)
chr5 (19-182)||(9317807-9317970)
chr5 (19-182)||(33516712-33516875)
chr5 (19-184)||(28959429-28959594)
chr5 (19-184)||(30152372-30152537)
chr5 (19-184)||(31431794-31431959)
chr5 (19-184)||(32599115-32599280)
chr5 (19-184)||(33292879-33293044)
chr5 (19-176)||(37671126-37671283)
chr5 (46-182)||(37755336-37755472)
chr5 (19-182)||(30168825-30168988)
chr5 (19-182)||(34616874-34617037)
chr5 (19-182)||(40473192-40473355)
chr5 (46-182)||(8665145-8665281)
chr5 (19-182)||(15758500-15758663)
chr5 (116-182)||(29966806-29966872)
[»] chr4 (25 HSPs)
chr4 (18-185)||(15284673-15284840)
chr4 (18-184)||(15228230-15228396)
chr4 (19-185)||(1900616-1900782)
chr4 (26-184)||(24460358-24460516)
chr4 (22-184)||(15391087-15391249)
chr4 (18-182)||(24592059-24592223)
chr4 (18-182)||(14665380-14665544)
chr4 (18-182)||(17014362-17014526)
chr4 (18-184)||(14235270-14235436)
chr4 (19-182)||(18800359-18800522)
chr4 (19-182)||(36344261-36344424)
chr4 (19-182)||(14763050-14763213)
chr4 (19-182)||(33673544-33673707)
chr4 (19-182)||(6570215-6570378)
chr4 (19-182)||(21970063-21970226)
chr4 (19-182)||(30754116-30754279)
chr4 (19-182)||(39851000-39851163)
chr4 (19-184)||(24113022-24113187)
chr4 (19-182)||(40105384-40105547)
chr4 (46-184)||(54833747-54833885)
chr4 (19-182)||(5006235-5006398)
chr4 (19-182)||(31126264-31126427)
chr4 (19-184)||(34188706-34188871)
chr4 (46-182)||(14098903-14099039)
chr4 (19-184)||(27163063-27163228)
[»] chr1 (8 HSPs)
chr1 (18-185)||(20461424-20461591)
chr1 (18-184)||(16207776-16207942)
chr1 (18-181)||(20340080-20340243)
chr1 (22-181)||(28152209-28152368)
chr1 (48-182)||(41793083-41793217)
chr1 (18-182)||(51638564-51638728)
chr1 (19-182)||(28585327-28585490)
chr1 (19-182)||(10963016-10963179)
[»] chr3 (58 HSPs)
chr3 (18-184)||(16626292-16626458)
chr3 (18-184)||(18530694-18530860)
chr3 (22-181)||(31033907-31034066)
chr3 (22-181)||(32293061-32293220)
chr3 (26-184)||(5652693-5652851)
chr3 (26-184)||(5713533-5713691)
chr3 (26-184)||(5724443-5724601)
chr3 (26-184)||(5767767-5767925)
chr3 (26-184)||(4626250-4626408)
chr3 (18-182)||(4721939-4722103)
chr3 (18-182)||(6192624-6192788)
chr3 (18-182)||(18051570-18051734)
chr3 (18-181)||(29148541-29148704)
chr3 (26-184)||(17993578-17993736)
chr3 (28-182)||(15740890-15741044)
chr3 (18-182)||(4796439-4796603)
chr3 (18-182)||(8296280-8296444)
chr3 (18-182)||(8301053-8301217)
chr3 (19-182)||(7073520-7073683)
chr3 (18-181)||(15892492-15892655)
chr3 (28-182)||(18330977-18331131)
chr3 (28-182)||(35881074-35881228)
chr3 (19-182)||(8212046-8212209)
chr3 (19-182)||(10396441-10396604)
chr3 (19-182)||(20576634-20576797)
chr3 (19-182)||(51782331-51782494)
chr3 (56-184)||(5756907-5757034)
chr3 (19-182)||(11110136-11110299)
chr3 (19-182)||(18276839-18277002)
chr3 (19-182)||(18307441-18307604)
chr3 (19-182)||(28021583-28021746)
chr3 (19-182)||(48466235-48466398)
chr3 (19-182)||(5609109-5609272)
chr3 (19-182)||(18292140-18292303)
chr3 (19-182)||(21675001-21675164)
chr3 (19-182)||(24328467-24328630)
chr3 (19-182)||(28115741-28115904)
chr3 (19-182)||(29664757-29664920)
chr3 (19-182)||(36996864-36997027)
chr3 (46-184)||(6542276-6542414)
chr3 (46-184)||(18243045-18243183)
chr3 (28-182)||(22387374-22387528)
chr3 (19-182)||(4417227-4417390)
chr3 (19-182)||(28339610-28339773)
chr3 (19-184)||(32439460-32439625)
chr3 (19-182)||(5014020-5014183)
chr3 (19-182)||(47023761-47023924)
chr3 (81-182)||(5467293-5467394)
chr3 (19-184)||(5596144-5596309)
chr3 (19-182)||(18225499-18225662)
chr3 (19-182)||(31964260-31964423)
chr3 (48-184)||(20066349-20066485)
chr3 (19-182)||(7996870-7997033)
chr3 (19-182)||(10643378-10643541)
chr3 (81-182)||(4346536-4346637)
chr3 (81-182)||(22870705-22870806)
chr3 (81-182)||(22885764-22885865)
chr3 (48-182)||(17984772-17984906)
[»] chr2 (40 HSPs)
chr2 (18-185)||(19456155-19456322)
chr2 (18-185)||(21702898-21703065)
chr2 (26-185)||(27119028-27119187)
chr2 (22-181)||(22925766-22925925)
chr2 (26-184)||(3784995-3785153)
chr2 (26-184)||(31891070-31891228)
chr2 (26-184)||(34157351-34157509)
chr2 (22-184)||(16163940-16164105)
chr2 (26-184)||(34303045-34303203)
chr2 (18-182)||(28882557-28882721)
chr2 (18-182)||(12655885-12656049)
chr2 (18-182)||(20838261-20838425)
chr2 (18-182)||(27434178-27434342)
chr2 (19-184)||(34286695-34286860)
chr2 (19-184)||(34291755-34291920)
chr2 (18-182)||(23128300-23128464)
chr2 (19-182)||(27777565-27777728)
chr2 (19-182)||(27804050-27804213)
chr2 (19-182)||(27817323-27817486)
chr2 (19-182)||(12587153-12587316)
chr2 (19-182)||(13936279-13936442)
chr2 (19-182)||(37375504-37375667)
chr2 (19-182)||(32050141-32050304)
chr2 (19-182)||(39051557-39051720)
chr2 (19-182)||(39890417-39890580)
chr2 (19-182)||(12716337-12716500)
chr2 (19-182)||(19416234-19416397)
chr2 (19-181)||(9349717-9349879)
chr2 (19-180)||(260488-260649)
chr2 (46-182)||(11634948-11635084)
chr2 (46-182)||(11641137-11641273)
chr2 (46-182)||(21676944-21677080)
chr2 (19-182)||(16829073-16829236)
chr2 (19-182)||(16892245-16892408)
chr2 (19-182)||(34862023-34862186)
chr2 (19-182)||(37685644-37685807)
chr2 (19-182)||(37700909-37701072)
chr2 (19-182)||(37925836-37925999)
chr2 (46-180)||(40233856-40233990)
chr2 (18-182)||(31876624-31876788)
[»] scaffold0260 (1 HSPs)
scaffold0260 (18-181)||(2403-2566)
[»] chr8 (24 HSPs)
chr8 (22-181)||(18710934-18711093)
chr8 (22-181)||(44563447-44563606)
chr8 (26-184)||(19658752-19658910)
chr8 (26-184)||(33245010-33245168)
chr8 (22-184)||(22080586-22080748)
chr8 (18-181)||(16283797-16283960)
chr8 (18-182)||(16277901-16278065)
chr8 (18-182)||(2136963-2137127)
chr8 (18-182)||(14557971-14558135)
chr8 (26-182)||(19688445-19688601)
chr8 (18-182)||(27608609-27608773)
chr8 (18-129)||(18791107-18791218)
chr8 (19-182)||(19674788-19674951)
chr8 (46-184)||(3329239-3329377)
chr8 (46-184)||(19286807-19286945)
chr8 (19-184)||(29829667-29829832)
chr8 (19-179)||(12092429-12092589)
chr8 (19-182)||(19208065-19208228)
chr8 (19-182)||(28361660-28361823)
chr8 (19-182)||(33259070-33259233)
chr8 (19-182)||(31489455-31489618)
chr8 (102-182)||(189441-189521)
chr8 (19-182)||(9354970-9355133)
chr8 (48-182)||(31354871-31355005)
[»] chr6 (44 HSPs)
chr6 (22-181)||(14142977-14143136)
chr6 (22-181)||(26788289-26788448)
chr6 (22-181)||(27196662-27196821)
chr6 (22-181)||(27252419-27252578)
chr6 (22-181)||(13521765-13521924)
chr6 (26-184)||(8892007-8892165)
chr6 (26-184)||(8903242-8903400)
chr6 (21-161)||(22456634-22456774)
chr6 (26-184)||(28162999-28163157)
chr6 (26-184)||(33373952-33374110)
chr6 (19-184)||(17092129-17092294)
chr6 (18-182)||(13298639-13298803)
chr6 (25-182)||(26918724-26918881)
chr6 (18-180)||(27272268-27272430)
chr6 (18-182)||(15424005-15424169)
chr6 (18-182)||(22934568-22934732)
chr6 (18-182)||(23857013-23857177)
chr6 (18-182)||(27290058-27290222)
chr6 (19-182)||(16750198-16750361)
chr6 (19-182)||(29549819-29549982)
chr6 (18-182)||(26989345-26989510)
chr6 (18-182)||(24864061-24864225)
chr6 (18-181)||(24304306-24304469)
chr6 (19-182)||(34463035-34463198)
chr6 (46-182)||(27485473-27485609)
chr6 (19-182)||(3696425-3696588)
chr6 (19-182)||(27019480-27019643)
chr6 (19-179)||(26116099-26116259)
chr6 (46-176)||(4758114-4758244)
chr6 (19-184)||(4545464-4545629)
chr6 (19-184)||(4723823-4723988)
chr6 (19-180)||(16674485-16674646)
chr6 (19-179)||(4773353-4773513)
chr6 (19-182)||(16943716-16943879)
chr6 (19-182)||(29573357-29573520)
chr6 (19-182)||(30557705-30557868)
chr6 (18-184)||(27359680-27359846)
chr6 (18-184)||(27450023-27450189)
chr6 (19-184)||(27044730-27044895)
chr6 (19-184)||(28207796-28207961)
chr6 (19-184)||(4525628-4525793)
chr6 (19-184)||(27008069-27008234)
chr6 (19-182)||(29501759-29501922)
chr6 (19-157)||(26777299-26777437)
[»] scaffold0109 (1 HSPs)
scaffold0109 (26-184)||(21906-22064)
[»] scaffold0639 (1 HSPs)
scaffold0639 (19-184)||(364-529)
[»] scaffold0089 (3 HSPs)
scaffold0089 (18-182)||(46730-46894)
scaffold0089 (26-184)||(39822-39980)
scaffold0089 (18-182)||(30110-30274)
[»] scaffold0415 (1 HSPs)
scaffold0415 (19-182)||(6361-6524)
[»] scaffold0124 (1 HSPs)
scaffold0124 (18-180)||(30801-30964)
[»] scaffold0336 (1 HSPs)
scaffold0336 (19-184)||(9911-10076)
[»] scaffold0143 (1 HSPs)
scaffold0143 (18-182)||(27639-27804)
[»] scaffold0237 (1 HSPs)
scaffold0237 (18-182)||(14675-14839)
[»] scaffold0159 (2 HSPs)
scaffold0159 (19-182)||(8812-8975)
scaffold0159 (48-182)||(20362-20496)
[»] scaffold0144 (1 HSPs)
scaffold0144 (19-182)||(25947-26110)
[»] scaffold0350 (1 HSPs)
scaffold0350 (19-182)||(6985-7148)
[»] scaffold0032 (1 HSPs)
scaffold0032 (26-81)||(119651-119706)
[»] scaffold0038 (1 HSPs)
scaffold0038 (19-184)||(8294-8459)
[»] scaffold0099 (1 HSPs)
scaffold0099 (80-181)||(46604-46707)


Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 16449629 - 16449795
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  16449629 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattctgaacaacgtagcaacccaaaggattacggaagcattctgggcaattg 16449728  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  16449729 gcatgatcatggtcaaacagagaggcttggcatagcttgatgtgtagaggcaccagaggagttgcaa 16449795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 16041835 - 16041668
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||    
T  16041835 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaagattacggaagcattctgggcaattg 16041736  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 185  Q
    | |||||| || | ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16041735 gtatgatcgtgattaaacagagaggcttgacatagcttgatgtgtagaggcaccagaggagttgcaat 16041668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 26485202 - 26485043
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  26485202 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 26485103  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  26485102 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 26485043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 26682635 - 26682794
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  26682635 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 26682734  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  26682735 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 26682794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 39210658 - 39210817
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| |||||| ||||| ||||||    
T  39210658 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacacagcaacccaaaggattacagaatcattcttggcaattggcat 39210757  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  39210758 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 39210817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 2775867 - 2775708
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||| |||||| ||||| ||||||    
T  2775867 tcgctgatagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattatagaatcattcttggcaattggcat 2775768  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  2775767 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 2775708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 4201051 - 4200896
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||    
T  4201051 tgacagtcagataattgtcgttcatcagtctctggatgtcattctgaacaacgtagcaacccaaaggattacagaatcattcttggcaattggcatgatc 4200952  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  4200951 atggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 4200896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 2108644 - 2108799
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||| | ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  2108644 tgacagttagataattgtcgttcatcaggctctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 2108743  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  2108744 atggtcaaacagagaggcttggcataatttgatgtgtagtggcaccagaggagttg 2108799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 31088103 - 31088261
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||||||  ||||||| ||||||||||| ||||| ||||||||||    
T  31088103 tgacagtcagataattgtcgttcatcagtctctggatgtcattctgaacaacgtagcaaccccgaggattatggaagcattctgggcaactggcatgatc 31088202  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  31088203 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 31088261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 45733964 - 45733806
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  45733964 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 45733865  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  45733864 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 45733806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 10916499 - 10916663
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  10916499 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 10916598  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  ||||| ||| ||||  || |||||||||||||| |||||||||||||||||    
T  10916599 gcatgatcatggctaaacagagaagctttacacagcttgatgtgtagaggcaccagaggagttgc 10916663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 2155085 - 2154921
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  2155085 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 2154986  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  2154985 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 2154921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 180
Target Start/End: Complemental strand, 5128494 - 5128342
Alignment:
Q  28 acagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcat 127  Q
    ||||||||| |||| || ||||||||||| |||||||||| |||||||  ||||||||||||||||||||| | |||| |||||||  ||||||||||||    
T  5128494 acagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtgtagcaacccaaaggattacgaaggcatcctaggcacttggcatgatcat 5128395  T
Q  128 ggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    ||   |||| ||| |||| ||| | |||||||||||| |||||||||||||||    
T  5128394 ggctgaacagagaagctttgcacaacttgatgtgtagaggcaccagaggagtt 5128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 16503011 - 16503175
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| ||||||     ||||||||||||||||||| | |||| |||||||  ||    
T  16503011 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacggtaaagcaacccaaaggattacgaaggcatcctaggcacttg 16503110  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||||||| |||| ||| |||||||||||||| |||||||||||||||||    
T  16503111 gcatgatcatggctgaacaaagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 16503175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 16518047 - 16518211
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| ||||||     ||||||||||||||||||| | |||| |||||||  ||    
T  16518047 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacggtaaagcaacccaaaggattacgaaggcatcctaggcacttg 16518146  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||||||| |||| ||| |||||||||||||| |||||||||||||||||    
T  16518147 gcatgatcatggctgaacaaagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 16518211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 11424418 - 11424571
Alignment:
Q  28 acagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcat 127  Q
    ||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||||||||||||    
T  11424418 acagtcaaa-aattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttggcatgatcat 11424516  T
Q  128 ggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  11424517 ggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 11424571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 26435768 - 26435605
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | |||||||   | |||||||||||||||||||| |||| |||| ||   ||    
T  26435768 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggattacggaggcatcctagacactcgg 26435669  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  26435668 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 26435605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 26537502 - 26537665
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | ||||||| |||||| ||| | |||| |||| ||  |||    
T  26537502 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccgaaggatcacgaaggcatcctagacacttgg 26537601  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  26537602 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 26537665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 16736092 - 16736255
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  16736092 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 16736191  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  16736192 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 16736255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 16751146 - 16751309
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  16751146 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 16751245  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  16751246 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 16751309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 17524043 - 17523880
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  17524043 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 17523944  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  17523943 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 17523880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 17529172 - 17529335
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  17529172 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 17529271  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  17529272 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 17529335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 26513292 - 26513130
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||| ||||| ||||| |||| |||| ||  |||    
T  26513292 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccagaggatcacggaggcatcctagacacttgg 26513193  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || ||||||||||||||||    
T  26513192 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttg 26513130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 5146972 - 5147133
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   | |||||||||||||| ||||| |||| |||| ||  |||    
T  5146972 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggatcacggaggcatcctagacacttgg 5147071  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||    
T  5147072 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagtt 5147133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 31125404 - 31125264
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    |||||||| || |||||||| | ||||||| | | |||||||||||||| ||| | |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  31125404 ttcatcaaactttggatgtcgtcttgaacagcatggcaacccaaaggatcacgaaggcatcctagacacttggcatgatcatggctgaacagagaagctt 31125305  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgcaata 186  Q
     ||| |||||||||||||| |||||||||||||| ||||||    
T  31125304 tgcacagcttgatgtgtagaggcaccagaggagtggcaata 31125264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 3445817 - 3445654
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  3445817 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 3445718  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  3445717 catgctcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 3445654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 31564022 - 31564187
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || |||||||| || |||||||| | ||||||| | | ||||||| |||||| ||||| |||| |||| ||  |||    
T  31564022 acatcactgacagtcagaagattatcattcatcaaactttggatgtcgtcttgaacagcatggcaacccgaaggatcacggaggcatcctagacacttgg 31564121  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||| ||||    
T  31564122 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagtggcaa 31564187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 18541292 - 18541145
Alignment:
Q  37 taattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaaca 136  Q
    |||||| ||| ||||||||||||||  || ||||| || || | ||| ||||||||||| ||| | |||||| ||||    ||||||||||| |||||||    
T  18541292 taattgccgtccatcaagctctggacatcgttttggacgacatggcagcccaaaggattgcgggaacattcttggcattcagcatgatcatgttcaaaca 18541193  T
Q  137 aagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |  | |||||||| | |||||| || ||||||||||||||||||||||    
T  18541192 ataaagcttggcacaacttgatatggagtggcaccagaggagttgcaa 18541145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 24592173 - 24592336
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||| ||| |||||||| | |||||||   || ||||||||||||| ||||| |||| |||| ||  |||    
T  24592173 acatcactgacagtcagaagattatcattcatcaggctttggatgtcttcttgaacagtataacaacccaaaggatcacggaggcatcctagacacttgg 24592272  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || || ||||||||||||||    
T  24592273 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggtaccagaggagttgc 24592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 26319501 - 26319664
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  26319501 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagtcacttgg 26319600  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  26319601 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 26319664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 5160030 - 5159865
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||| |  |||||| ||| ||||||||||||||  || ||||| || || | ||| ||||||||||| ||| | |||||| ||||    |    
T  5160030 acatcactgacagtaaggtaattgccgtccatcaagctctggacatcgttttggacgacatggcagcccaaaggattgcgggaacattcttggcactcag 5159931  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||| ||||||||  | |||||||| | |||||| || || |||||||||||||||||||    
T  5159930 catgatcatgttcaaacaataaagcttggcacaacttgatatggagcggcaccagaggagttgcaa 5159865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 182
Target Start/End: Complemental strand, 11442021 - 11441920
Alignment:
Q  81 gcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    |||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||    
T  11442021 gcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagtt 11441922  T
Q  181 gc 182  Q
    ||    
T  11441921 gc 11441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 26669573 - 26669709
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  ||||||||||||| |  |||| ||| ||||    
T  26669573 ttcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttggcatgatcatgattgaacagagaagctt 26669672  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     ||| |||||||||||||| || ||||||||||||||    
T  26669673 tgcacagcttgatgtgtagaggtaccagaggagttgc 26669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 4144755 - 4144918
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||| | ||| |||||||| | |||||||   || ||||||||||||| || || |||| |||| ||  |||    
T  4144755 acatcactgacagtcagaagattatcattcattaggctttggatgtcttcttgaacagtataacaacccaaaggatcacagaggcatcctagacacttgg 4144854  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  4144855 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 4144918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 9619162 - 9618999
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  9619162 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 9619063  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  9619062 catgctcatggctgaacagagaagctttgcacagcttgatgtgtaggggtaccagaggagttgc 9618999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 26274726 - 26274889
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||| ||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  26274726 acatcactgacagtcagaagattatcattcattaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 26274825  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  26274826 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 26274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 45387854 - 45387691
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||| ||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  45387854 acatcactgacagtcagaagattatcattcatcaggctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 45387755  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||    |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  45387754 catgatcatgactgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 45387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 6e-76; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 22888990 - 22888823
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |     
T  22888990 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtaacaacccaaaggattacggaagcattctgggcaacta 22888891  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 185  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  22888890 gcatgatcatggtcaaacaaagaggtttggcatagcttgatgtgtagaggcaccagaggagttgcaat 22888823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 25199549 - 25199383
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||| |||||||||| ||||| ||    
T  25199549 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcatcttgaacgacgtagcaccccgaaggattacagaagcattctgggcaactg 25199450  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  25199449 gcatgatcatggtcaaacaaaaaggcttggcatagcttgatgtgtaaaggcaccagaggagttgcaa 25199383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 33877763 - 33877604
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||| ||||| ||||||    
T  33877763 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcaacaacccaaaggattacagaatcattcttggcaattggcat 33877664  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    | ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  33877663 ggtcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 33877604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 29888725 - 29888890
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||| ||||| |||    
T  29888725 acatcgttgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacagcatagcaacccaaaggattacgaaagcaatctgggcaattgg 29888824  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||| ||| ||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  29888825 catgatcacggttaaacagagaagctttgcatagcttgatgtgtagtggtaccagaggagttgcaa 29888890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 11326306 - 11326148
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  11326306 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 11326207  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  11326206 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 11326148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 13184299 - 13184456
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||||||    
T  13184299 tgacagtcagataattgtcgttcatcat-ctctggatgtcattctgaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcatgatc 13184397  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  13184398 atggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttgcaa 13184456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 13440144 - 13440302
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  13440144 tgacagtcagataattgtcgttcatcagtctctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 13440243  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| | |||||||||||| || ||||||||| |||||||||||||||||||    
T  13440244 atggtcaaacagaaaggcttggcataactcgatgtgtagaggcaccagaggagttgcaa 13440302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 9548193 - 9548349
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| |||||| |||    
T  9548193 tgacagtcagataattgtcgttcatcagtctctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcataatc 9548292  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||    
T  9548293 atggtcaaacagagaggcttggcataactcgatgtgtagaggcaccagaggagttgc 9548349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 23892725 - 23892560
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| || ||||| ||||||||||| ||||||||||| ||||||||||||||||| | |||||| |||||||||||||| | |||| || ||||  |||    
T  23892725 acatcactaacagttaaataattgtcattcatcaagctttggatgtcattttgaacgaagtagcaccccaaaggattacgaaggcatcctgggcagttgg 23892626  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||| ||||| ||| |||| |||||||||||||||||| |||||||||||||||||||    
T  23892625 catgatcatggttaaacagagaagctttgcatagcttgatgtgtagaggcaccagaggagttgcaa 23892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 24687799 - 24687965
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  24687799 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacatg 24687898  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||||    
T  24687899 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgcaa 24687965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 22998756 - 22998920
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  22998756 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 22998855  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  22998856 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 22998920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 23717630 - 23717794
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  23717630 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 23717729  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  23717730 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 23717794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 33777997 - 33777843
Alignment:
Q  28 acagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcat 127  Q
    ||||||||| |||| || ||||||||||| |||||||||| |||||||  ||||||||||||||||||||| | |||| |||||||  ||||||||||||    
T  33777997 acagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtgtagcaacccaaaggattacgaaggcatcctaggcacttggcatgatcat 33777898  T
Q  128 ggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||   || | ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  33777897 ggctgaatagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 33777843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 30935153 - 30934989
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| ||||||   ||||||||||||||||||||| | |||| |||||||  ||    
T  30935153 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacggtgtagcaacccaaaggattacgaaggcatcctaggcacttg 30935054  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| | |||||||||||| |||||||||||||||||    
T  30935053 gcatgatcatggctgaacagagaagctttgcacaacttgatgtgtagaggcaccagaggagttgc 30934989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 18500373 - 18500536
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||| ||  |||    
T  18500373 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctagacacttgg 18500472  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  18500473 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 18500536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 23752102 - 23752256
Alignment:
Q  28 acagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcat 127  Q
    ||||||||| |||| || ||||||||||| |||||||| | |||||||   |||||||||||||||||| | | |||| |||||||  ||||||||||||    
T  23752102 acagtcaaaaaattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattatgaaggcatcctaggcacttggcatgatcat 23752201  T
Q  128 ggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||  ||||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  23752202 ggctaaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 23752256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 11549863 - 11549710
Alignment:
Q  29 cagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatg 128  Q
    |||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||| ||  |||||||||||||    
T  11549863 cagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctagacacttggcatgatcatg 11549764  T
Q  129 gtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  11549763 gctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 11549710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 15658402 - 15658566
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||| | |||||||   | |||||||||||||||||| | |||| |||| ||  ||    
T  15658402 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggattacgaaggcatcctagacacttg 15658501  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  15658502 gcatgatcatggctgaacagagaagcttcgcacagcttgatgtgtagaggcaccagaggagttgc 15658566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 24970538 - 24970375
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||    ||||||||||||||||||| | |||| |||||||  ||    
T  24970538 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtaaagcaacccaaaggattacgaaggcatcctaggcacttg 24970439  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||   |||| ||| |||| ||| | |||||||||||| ||||||||||||||||    
T  24970438 gcatgatcatggctgaacagagaagctttgcacaacttgatgtgtagaggcaccagaggagttg 24970375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 41675222 - 41675063
Alignment:
Q  25 ctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgat 124  Q
    |||||||||| | |||| || ||||||||||| |||||||| | |||||||   |||||||||||||||||||||| |||| |||| ||  |||||||||    
T  41675222 ctgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacggaggcatcctagacacttggcatgat 41675123  T
Q  125 catggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||   |||| ||| |||| ||| || ||||||||||| |||||||||||||||||||    
T  41675122 catggctgaacagagaagctttgcacagtttgatgtgtagaggcaccagaggagttgcaa 41675063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 6874824 - 6874661
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  6874824 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 6874725  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  6874724 catgatcatggttgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 6874661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 43078771 - 43078608
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  43078771 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 43078672  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  43078671 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 43078608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 28649754 - 28649591
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| |  |||||    |||||||||||||||| ||||| |||| |||| ||  |||    
T  28649754 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcctgaacggtatagcaacccaaaggatcacggaggcatcctagacacttgg 28649655  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  28649654 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 28649591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 2511570 - 2511407
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  2511570 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 2511471  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  2511470 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 2511407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 3790060 - 3789897
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  3790060 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 3789961  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || ||||| |||||||||||    
T  3789960 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcactagaggagttgc 3789897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 13324472 - 13324635
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  13324472 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 13324571  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || ||||||||||| |||||    
T  13324572 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggggttgc 13324635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 31826050 - 31826213
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  31826050 acatcactgacagtcagaaaattatcatccatcaagctttggatgtcgtcttgaacagcttggcaacccaaaggatcacggaggcatcctagacacttgg 31826149  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || ||||||| |||||||||    
T  31826150 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccaaaggagttgc 31826213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 18375054 - 18375218
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||| | | || || ||||||||||| |||||||| | |||||||   || ||||||||||||| ||||| |||| | || ||  ||    
T  18375054 gacatcactgacagtcagaaagttatcattcatcaagctttggatgtcctcttgaacagtataacaacccaaaggatcacggaggcatcccagacacttg 18375153  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||| |  |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  18375154 gcatgatcatgattgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 18375218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 5638429 - 5638266
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||| ||| |||||||| | |||||||   || ||||||||||||| ||||| |||| |||| ||  |||    
T  5638429 acatcactgacagtcagaagattatcattcatcaggctttggatgtcttcttgaacagtataacaacccaaaggatcacggaggcatcctagacacttgg 5638330  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  5638329 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 5638266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 12132674 - 12132511
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| |||| ||  |||    
T  12132674 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcctagacacttgg 12132575  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  12132574 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 12132511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 24681959 - 24681796
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  24681959 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 24681860  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  24681859 catgctcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 24681796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 24724486 - 24724323
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  24724486 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 24724387  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  24724386 catgctcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 24724323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 30029934 - 30029771
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| || ||||| | ||||||| ||| |||||||||||||| |||||  ||| | || ||  |||    
T  30029934 acatcactgacagtcagaagattatcattcatcaagctttgaatgtcgtcttgaacagcgtggcaacccaaaggatcacggagacatcccagacacttgg 30029835  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  30029834 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 30029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 37770657 - 37770795
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||| | |||||||| | |||||||   || ||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||||||| ||||    
T  37770657 ttcatcaagttttggatgtcgtcttgaacagtataacaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacaaagaagctt 37770756  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
     ||| |||||||| ||||| |||||||||||||| ||||    
T  37770757 tgcacagcttgatatgtagaggcaccagaggagtagcaa 37770795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 37358286 - 37358451
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || |||||||| || |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  37358286 acatcactgacagtcagaagattatcattcatcaatctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 37358385  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||| ||||| ||||    
T  37358386 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccaggggagtggcaa 37358451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 9317970 - 9317807
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  9317970 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 9317871  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  9317870 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 9317807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 33516875 - 33516712
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  33516875 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 33516776  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  33516775 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 33516712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 28959429 - 28959594
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   | ||| |||||||||| || || |||| |||| ||  |||    
T  28959429 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatggcagcccaaaggatcacagaggcatcctagacacttgg 28959528  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| |||||||| ||| ||||||| ||| || |||||||||||||| ||||    
T  28959529 catgatcatggctgaacagagaggctttgcacagcttgacgtgcagaggcaccagaggagtggcaa 28959594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 30152537 - 30152372
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | |||||||   || ||||||||||||| ||||| |||| | || ||  |||    
T  30152537 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagtataacaacccaaaggatcacggaggcatcccagacacttgg 30152438  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||| |  |||| ||| |||| ||| |||||||| ||||| |||||||||||||| ||||    
T  30152437 catgatcatgattgaacagagaagctttgcacagcttgatatgtagaggcaccagaggagtggcaa 30152372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 31431959 - 31431794
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  |||    
T  31431959 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttgg 31431860  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| |||||||||||| || || |||||||||||||| ||||    
T  31431859 catgatcatggctgaacagagaagctttgcatagcttgatatgcagaggcaccagaggagtggcaa 31431794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 32599115 - 32599280
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  |||    
T  32599115 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttgg 32599214  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| |||||||| ||| ||||||| ||| || |||||||||||||| ||||    
T  32599215 catgatcatggctgaacagagaggctttgcacagcttgacgtgcagaggcaccagaggagtggcaa 32599280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 33293044 - 33292879
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||| |  |||||| ||| ||||||||||||||  || ||||| || || | ||| |||||||| || ||| | |||||| ||||    |    
T  33293044 acatcactgacagtaaggtaattgccgtccatcaagctctggacatcgttttggacgacatggcagcccaaagggttgcgggaacattcttggcactcag 33292945  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||| ||||||||  | |||||||| | |||||| || ||||||||||||||||||||||    
T  33292944 catgatcatgttcaaacaataaagcttggcacaacttgatatggagtggcaccagaggagttgcaa 33292879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 37671126 - 37671283
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || |||||||| || |||||||| | ||||||| | | |||||||||||||| || || |||| |||| ||  |||    
T  37671126 acatcactgacagtcagaagattatcattcatcaaactttggatgtcgtcttgaacagcatggcaacccaaaggatcacagaggcatcctagacacttgg 37671225  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagagg 176  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||    
T  37671226 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagagg 37671283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 37755472 - 37755336
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||| | |||||||| | |||||||   || ||||||||||||| ||||| |||  |||| ||  ||||||||||||||   |||| ||| ||||    
T  37755472 ttcatcaagttttggatgtcgtcttgaacagtataacaacccaaaggatcacggaggcaccctagacacttggcatgatcatggctgaacagagaagctt 37755373  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     ||| |||||||| ||||| |||||||||||||||||    
T  37755372 tgcacagcttgatatgtagaggcaccagaggagttgc 37755336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 30168988 - 30168825
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||| ||||| |||||||| | ||||||| | || ||||||||||||| |||||  ||| | || ||  | |    
T  30168988 acatcactgacagtcagaagattatcattcattaagctttggatgtcgtcttgaacagcataacaacccaaaggatcacggagacatcccagacacttag 30168889  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  30168888 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 30168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 34617037 - 34616874
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| |  ||||||   | ||||||||| |||||||  | |||| |||| ||  |||    
T  34617037 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcctgaacagtatggcaacccaagggattacaaaggcatcctagacacttgg 34616938  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||  |||||||||||||||||    
T  34616937 catgatcatggctgaacagagaagctttgcacagcttgatgtgtaaaggcaccagaggagttgc 34616874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 40473192 - 40473355
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||| ||||||| |||||||| | | ||||| | | |||||||||||||| |||||  ||| |||| ||  |||    
T  40473192 acatcactgacagtcagaagattatcattcgtcaagctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggagacatcctagacacttgg 40473291  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  40473292 catggtcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 40473355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 8665145 - 8665281
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| ||||| ||   ||||||| | | |||||||||||||| ||||| |||| |||| ||  ||||||| ||||||   ||||  || ||||    
T  8665145 ttcatcaagctttggatatcgccttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttggcatgctcatggctgaacagggaagctt 8665244  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     ||| ||||||||||| || |||||||||||||||||    
T  8665245 tgcacagcttgatgtgcagaggcaccagaggagttgc 8665281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 15758500 - 15758663
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | | ||||| | | |||||| ||||||| ||||| |||| |||| ||  |||    
T  15758500 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtctcgaacagcatggcaacctaaaggatcacggaggcatcctagacacttgg 15758599  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   ||||  || |||| ||| ||||||||||| || |||||||||||||||||    
T  15758600 catgctcatggctgaacagggaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 15758663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 29966806 - 29966872
Alignment:
Q  116 tggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  29966806 tggcatgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 29966872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 6e-76; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 15284673 - 15284840
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||| ||    
T  15284673 gacatcgctgacagtcaaataattgtcgttcatcaaactctagatgtcattttgaacaacgtagcaacccaaaggattacggaagcatttcgggcaactg 15284772  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15284773 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 15284840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 15228396 - 15228230
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| | ||| ||    
T  15228396 gacatcgctgacagtcaaataactgtcgttcatcaagctctggatgtcatttcgaacaacgtggcaacctaaaggattacggaagcattctggacaattg 15228297  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15228296 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 15228230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 1900782 - 1900616
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||| ||||| |||    
T  1900782 acatcgctgacagtcaaataattgtcgttcatcaagctctggatttcattttgaacaacgtagcaacccaaagtattatggaatcattctgggcaactgg 1900683  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 185  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1900682 catggtcatggtcaaacaaagaggcttggcatagcttgatgtgtagaggcaccagaggagttgcaat 1900616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 24460358 - 24460516
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  24460358 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 24460457  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  24460458 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 24460516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 15391087 - 15391249
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    ||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||| ||  ||||||| ||||| ||||||    
T  15391087 tcgctgacagtcagataattgtcgttcatcaggctctggatatcattctgaacaacgtagcaaccccaaggattatggcggcattctgggcaattggcat 15391186  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||| |||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  15391187 gattatggtcaaacaaggaggcttggcatagcttgatgtgtagcggtaccagaggagttgcaa 15391249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 24592059 - 24592223
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||  ||||||||||||||||||| | | |||| |||||||  ||    
T  24592059 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtgtagcaacccaaaggattatgaaggcatcctaggcacttg 24592158  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  ||||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  24592159 gcatgatcatggctaaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 24592223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 14665544 - 14665380
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  14665544 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 14665445  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  14665444 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 14665380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 17014526 - 17014362
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||  ||||||||||||||||||||| | |||| |||||||  ||    
T  17014526 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtgtagcaacccaaaggattacgaaggcatcctaggcacttg 17014427  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  17014426 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 17014362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 14235270 - 14235436
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||| ||| ||| |||| || ||||| ||||||||||||||| |||||||||||||| || ||||||||| ||| ||||||  | |||  |    
T  14235270 gacatcactaacaatcagatatttgttgtccatcaggctctggatgtcattctgaacaacgtagcagcctaaaggattatggaggcattccggacaaacg 14235369  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||    
T  14235370 gcatggtcatggtcaaacaaggaagcttggcatagcttgatgtgtagtggtaccagaggagtcgcaa 14235436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 18800359 - 18800522
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  18800359 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 18800458  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  18800459 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 18800522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 36344261 - 36344424
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||||||| | |||| |||| ||  |||    
T  36344261 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggattacgaaggcatcctagacacttgg 36344360  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| | |||||||||||| |||||||||||||||||    
T  36344361 catgatcatggctgaacagagaagctttgcacaacttgatgtgtagaggcaccagaggagttgc 36344424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 14763050 - 14763213
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | |||||||||| ||||||| | |||| |||| ||  |||    
T  14763050 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaagattacgaaggcatcctagacacttgg 14763149  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  14763150 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 14763213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 33673544 - 33673707
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  33673544 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 33673643  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  33673644 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 33673707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 6570378 - 6570215
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   | |||||||||||||||||||| |||| |||| ||  |||    
T  6570378 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggattacggaggcatcctagacacttgg 6570279  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||| |||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  6570278 cataatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 6570215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 21970226 - 21970063
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   |||||||||||||||| |||||  ||| | || ||  |||    
T  21970226 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggatcacggagacatcccagacacttgg 21970127  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| | ||||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  21970126 catgatcatgattaaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 21970063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 30754279 - 30754116
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  30754279 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 30754180  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  30754179 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 30754116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 39851163 - 39851000
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | | |||||   | |||||||||||||| ||||| |||| |||| ||  |||    
T  39851163 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtctcgaacagtatggcaacccaaaggatcacggaggcatcctagacacttgg 39851064  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  39851063 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 39851000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 24113187 - 24113022
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||| |  |||||| ||| ||||||||||||||  || ||||| || || | ||| ||||||||||| ||| | |||||| ||||  | |    
T  24113187 acatcactgacagtaaggtaattgccgtccatcaagctctggacatcgttttggacgacatggcagcccaaaggattgcgggaacattcttggcacttag 24113088  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||| ||||||||  | |||||||| | |||||| || ||||||||||||||||||||||    
T  24113087 catgatcatgttcaaacaataaagcttggcacaacttgatatggagtggcaccagaggagttgcaa 24113022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 40105384 - 40105547
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  40105384 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 40105483  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| | ||||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  40105484 catgatcatgattaaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 40105547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 54833885 - 54833747
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | |||||||   | ||||||||| |||||||| | |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  54833885 ttcatcaagctttggatgtcgtcttgaacagtatggcaacccaagggattacgaaggcatcctagacatttggcatgatcatggctgaacagagaagctt 54833786  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
     ||| |||||||||||||| |||||||||||||| ||||    
T  54833785 tgcacagcttgatgtgtagaggcaccagaggagtggcaa 54833747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 5006398 - 5006235
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||| ||||||||| ||||| |||| | || ||  |||    
T  5006398 acatcactgacagtcagaagattatcattcatcaagctttggatgtcctcttgaacagtataacaatccaaaggatcacggaggcatcccagacacttgg 5006299  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| |||||||| ||| ||||| |||||||| || ||||||||||||||    
T  5006298 catgatcatggctgaacagagaggctttgcacagcttaatgtgtagaggtaccagaggagttgc 5006235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 31126264 - 31126427
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  31126264 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 31126363  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  31126364 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 31126427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 34188706 - 34188871
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||| |  |||||| ||| ||||||||||||||  || ||||| || || | ||| |||||||| || ||| | |||||| ||||    |    
T  34188706 acatcactgacagtaaggtaattgccgtccatcaagctctggacatcgttttggacgacatggcagcccaaagggttgcgggaacattcttggcactcag 34188805  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||| ||||||||  | |||||||| | |||||| || ||||||||||||||||||||||    
T  34188806 catgatcatgttcaaacaacaaagcttggcacaacttgatatggagtggcaccagaggagttgcaa 34188871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 14099039 - 14098903
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  ||||||||||||| |  |||| ||| ||||    
T  14099039 ttcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttggcatgatcatgattgaacagagaagctt 14098940  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     ||| |||||||||||||| || ||||||||||||||    
T  14098939 tgcacagcttgatgtgtagaggtaccagaggagttgc 14098903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 27163063 - 27163228
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | |||||||   || ||||||||||||| ||||| |||| | || ||  |||    
T  27163063 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagtataacaacccaaaggatcacggaggcatcccagacacttgg 27163162  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||| |  |||| ||| |||| ||| | |||||| ||||| || ||||||||||| ||||    
T  27163163 catgatcatgattgaacagagaagctttgcacaacttgatatgtagaggtaccagaggagtggcaa 27163228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 6e-76; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 20461591 - 20461424
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| | ||| ||    
T  20461591 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcgttttgaacaacgtagcaacccaaaggattacgaaagcattctggacaactg 20461492  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 185  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20461491 gcatgatcatggtcaaacaaagaggcttgacatagcttgatgtgtagtggcaccagaggagttgcaat 20461424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 16207776 - 16207942
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||| ||    
T  16207776 gacatcgctgacagtcaaataattgtcgttcatcaagctttggatgtcattttgaacgacatagcaccccaaaggattacggaagcattctgggcaactg 16207875  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  16207876 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagaggcaccaaaggagttgcaa 16207942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 20340080 - 20340243
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||| ||| |||||| | ||| ||    
T  20340080 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcgttttgaacaacgcagtaacccaaaggattacagaaacattctggacaactg 20340179  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  20340180 gcatgatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 20340243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 28152368 - 28152209
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  28152368 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 28152269  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  28152268 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 28152209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 41793083 - 41793217
Alignment:
Q  48 catcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttgg 147  Q
    ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||||||||||||||  |||| ||| |||| |    
T  41793083 catcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggttgaacagagaagctttg 41793182  T
Q  148 catagcttgatgtgtagtggcaccagaggagttgc 182  Q
    || ||||||||||| || |||||||||||||||||    
T  41793183 cacagcttgatgtgcagaggcaccagaggagttgc 41793217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 51638728 - 51638564
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||| | |||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| || || |||| |||| ||  ||    
T  51638728 gacatcactgacagtcagaaaattatcattcatcaagctttggatgtcctcttgaacagtataacaacccaaaggatcacagaggcatcctagacacttg 51638629  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| | |||||| ||||| |||||||||||||||||    
T  51638628 gcatgatcatggctgaacagagaagctttgcacaacttgatatgtagaggcaccagaggagttgc 51638564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 28585490 - 28585327
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| || ||||| | ||||||| | | |||||||||||||| |||||  ||| | || ||  |||    
T  28585490 acatcactgacagtcagaagattatcattcatcaagctttgaatgtcgtcttgaacagcatggcaacccaaaggatcacggagacatcccagacacttgg 28585391  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  28585390 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 28585327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 10963179 - 10963016
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| |  ||||||   | ||||||||| |||||||  | |||| |||  ||  |||    
T  10963179 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcctgaacagtatggcaacccaagggattacaaaggcatcctaaacacttgg 10963080  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  10963079 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 10963016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 2e-75; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 16626292 - 16626458
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||  ||||| ||    
T  16626292 gacatcgctgacagtcaaataattgttgttcatcaagctctggatgtcgttttgaacaacgtagcaacccaaaggattatggaagcattccgggcaactg 16626391  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16626392 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 16626458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 18530860 - 18530694
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||    
T  18530860 gacatcgctgacagtcaaataattgtcgttcatcaagccctggatgtcattttgaacaacatagcaacccaaaggattacggaagcattctggacaattg 18530761  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  18530760 gcatgatcatggtcaaacaaaaaggcttggcatagcttgatgtgtagaggcaccagaggagttgcaa 18530694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 31033907 - 31034066
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  31033907 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 31034006  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  31034007 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 31034066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 32293220 - 32293061
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  32293220 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 32293121  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  32293120 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 32293061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 5652851 - 5652693
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  5652851 tgacagtcagataattgtcgttcatcaggctctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 5652752  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5652751 atggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttgcaa 5652693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 5713691 - 5713533
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  5713691 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 5713592  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  5713591 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 5713533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 5724601 - 5724443
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  5724601 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 5724502  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  5724501 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 5724443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 5767767 - 5767925
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  5767767 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 5767866  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  5767867 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 5767925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 4626408 - 4626250
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  4626408 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 4626309  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| ||||||| |||||| || |||||||||||||||||||||||||||||    
T  4626308 atggtcaaacagagaggctcggcataactcgatgtgtagtggcaccagaggagttgcaa 4626250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 4722103 - 4721939
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||  ||||||||||||||||||||| | |||| |||||||  ||    
T  4722103 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtgtagcaacccaaaggattacgaaggcatcctaggcacttg 4722004  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  4722003 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 4721939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 6192788 - 6192624
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||  ||||||||||||||||||||| | |||| |||||||  ||    
T  6192788 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtgtagcaacccaaaggattacgaaggcatcctaggcacttg 6192689  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  6192688 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 6192624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 18051734 - 18051570
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| ||||||   ||||||||||||||||||||| | |||| |||||||| ||    
T  18051734 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacggtgtagcaacccaaaggattacgaaggcatcctaggcaattg 18051635  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     |||||||||||  ||||| ||| |||| |||||||||||||||||| |||||||||||||||||    
T  18051634 acatgatcatggctaaacagagaagctttgcatagcttgatgtgtagaggcaccagaggagttgc 18051570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 29148541 - 29148704
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| ||||||| ||||||||||| |||||||||| |||||||  ||||||||||||||||||||| | |||| |||| ||  ||    
T  29148541 gacatcactgacagtcaaagaattgtcattcatcaagctttggatgtcatcttgaacagtgtagcaacccaaaggattacgaaggcatcctagacacttg 29148640  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| ||||||||||||||||    
T  29148641 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttg 29148704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 17993578 - 17993736
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||||| | |||| |||| ||  ||||||||||    
T  17993578 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattacgaaggcatcctagacacttggcatgatc 17993677  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||||    
T  17993678 atggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgcaa 17993736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 15740890 - 15741044
Alignment:
Q  28 acagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcat 127  Q
    ||||||||| |||| || | ||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||||||||||||    
T  15740890 acagtcaaaaaattatcatccatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttggcatgatcat 15740989  T
Q  128 ggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||  ||||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  15740990 ggctaaacagagaagctttgcacagcttgatgtgtaggggcaccagaggagttgc 15741044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 4796439 - 4796603
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||   || ||||||||||||||||| | |||| |||||||  ||    
T  4796439 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtataacaacccaaaggattacgaaggcatcctaggcacttg 4796538  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  4796539 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 4796603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 8296444 - 8296280
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||  || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  8296444 gacatcactgacagtcaaaaaatcatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 8296345  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  8296344 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 8296280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 8301053 - 8301217
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| | |||| ||||| |||| || ||||||||||| ||||||||||||||||||    ||||||||||||||||||| | |||| |||||||  ||    
T  8301053 gacatcaccgacaatcaaaaaattatcattcatcaagctttggatgtcattttgaacagtaaagcaacccaaaggattacgaaggcatcctaggcacttg 8301152  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  8301153 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 8301217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 7073683 - 7073520
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | |||||||   |||||||||||||| ||||| | ||||||||||||  |||    
T  7073683 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaagggttacgaaggcattctaggcacttgg 7073584  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  7073583 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 7073520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 15892492 - 15892655
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||    ||||||||||||||||||  | |||| |||||||  ||    
T  15892492 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtaaagcaacccaaaggattacaaaggcatcctaggcacttg 15892591  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| ||||||||||||||||    
T  15892592 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttg 15892655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 18331131 - 18330977
Alignment:
Q  28 acagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcat 127  Q
    ||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||| ||||||||||| | |||| |||||||  ||||||||||||    
T  18331131 acagtcaaaaaattttcattcatcaagctttggatgtcatcttgaacagtatagcaacctaaaggattacgaaggcatcctaggcacttggcatgatcat 18331032  T
Q  128 ggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||   |||| ||| |||| ||| | |||||||||||| |||||||||||||||||    
T  18331031 ggctgaacagagaagctttgcacaacttgatgtgtagaggcaccagaggagttgc 18330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 35881228 - 35881074
Alignment:
Q  28 acagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcat 127  Q
    ||||||||| || | || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  ||||||||||||    
T  35881228 acagtcaaaaaaatttcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttggcatgatcat 35881129  T
Q  128 ggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  35881128 ggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 35881074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 8212209 - 8212046
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  8212209 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacatcatggcaacccaaaggatcacggaggcatcctagacacttgg 8212110  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| || ||||||||||| |||||||||||||||||    
T  8212109 catgatcatggctgaacagagaagctttgcacagtttgatgtgtagaggcaccagaggagttgc 8212046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 10396604 - 10396441
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| |  |||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  10396604 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcctgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 10396505  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| |||||||| ||| |||||||||||||| | |||||||||||||||    
T  10396504 catgatcatggctgaacagagaggctttgcacagcttgatgtgtagagacaccagaggagttgc 10396441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 20576634 - 20576797
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  20576634 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 20576733  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  20576734 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 20576797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 51782494 - 51782331
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  51782494 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 51782395  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  51782394 catgatcatggttgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 51782331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 5756907 - 5757034
Alignment:
Q  56 tctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttggcatagctt 155  Q
    ||||||||||||| ||| ||  ||||||     |||||||| ||||||||||| |  || ||||||||||||| ||||||| |||||||||||||| ||     
T  5756907 tctggatgtcattctgancacngtagcacnnncaaggattatggaagcattctggcaaactggcatgatcatg-tcaaacagagaggcttggcataactc 5757005  T
Q  156 gatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||||||||||||||||||||    
T  5757006 gatgtgtagtggcaccagaggagttgcaa 5757034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 11110136 - 11110299
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||| | |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  11110136 acatcactgacagtcagaaaattatcattcatcaagttttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 11110235  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  11110236 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 11110299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 18276839 - 18277002
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | |||||||||| ||||||| | |||| |||| ||  |||    
T  18276839 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaagattacgaaggcatcctagacacttgg 18276938  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  18276939 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 18277002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 18307441 - 18307604
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | |||||||||| ||||||| | |||| |||| ||  |||    
T  18307441 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaagattacgaaggcatcctagacacttgg 18307540  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  18307541 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 18307604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 28021746 - 28021583
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   |||||||||| ||||||||| | |||| |||| ||  |||    
T  28021746 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccagaggattacgaaggcatcctagacacttgg 28021647  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  28021646 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 28021583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 48466398 - 48466235
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   | |||||||||||||||||||| |||| |||| ||  |||    
T  48466398 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggattacggaggcatcctagacacttgg 48466299  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  48466298 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 48466235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 5609109 - 5609272
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | |||||||   | |||||||||||||| ||||| |||| |||| ||  |||    
T  5609109 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggatcacggaggcatcctagacacttgg 5609208  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  5609209 catgatcatggttgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 5609272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 18292140 - 18292303
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | |||||||||| ||||||| | |||| |||| ||  |||    
T  18292140 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaagattacgaaggcatcctagacacttgg 18292239  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| | |||||||||||| || ||||||||||||||    
T  18292240 catgatcatggctgaacagagaagctttgcacaacttgatgtgtagaggtaccagaggagttgc 18292303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 21675164 - 21675001
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   | |||||||||||||| ||||| |||| |||| ||  |||    
T  21675164 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggatcacggaggcatcctagacacttgg 21675065  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  21675064 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 21675001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 24328630 - 24328467
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | | ||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  24328630 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 24328531  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| | ||||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  24328530 catgatcatgattaaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 24328467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 28115741 - 28115904
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| ||||| |||| | || ||  |||    
T  28115741 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagtataacaacccaaaggatcacggaggcatcccagacacttgg 28115840  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  28115841 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 28115904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 29664757 - 29664920
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||| ||||| |||||||| | | ||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  29664757 acatcactgacagtcagaagattatcattcattaagctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 29664856  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  29664857 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 29664920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 36996864 - 36997027
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  36996864 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 36996963  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  36996964 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 36997027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 6542276 - 6542414
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    |||||||| || |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  6542276 ttcatcaaactttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacagagaagctt 6542375  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
     ||| |||||||||||||| |||||||||||||| ||||    
T  6542376 tgcacagcttgatgtgtagaggcaccagaggagtagcaa 6542414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 18243183 - 18243045
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    |||||||| || |||||||| | |||||||   |||||||||||||||||||| | |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  18243183 ttcatcaaactttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctagacacttggcatgatcatggctgaacagagaagctt 18243084  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
     ||| |||||||||||||| |||||||||||||| ||||    
T  18243083 tgcacagcttgatgtgtagaggcaccagaggagtggcaa 18243045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 22387374 - 22387528
Alignment:
Q  28 acagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcat 127  Q
    ||||||||| |||| || ||||||||||| |||||||||| |||||||   ||||||||||||| |||||| | |||| |||| ||  ||||||||||||    
T  22387374 acagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaagaattacgaaggcatcctagacacttggcatgatcat 22387473  T
Q  128 ggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||   |||| ||| |||| ||| |||||| ||||||   ||||||||||||||||    
T  22387474 ggctgaacagagaagctttgcacagcttgttgtgtataagcaccagaggagttgc 22387528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 4417390 - 4417227
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||| | |||||||| | |||||||   || ||||||||||||| ||||| |||| | || ||  |||    
T  4417390 acatcactgacagtcagaagattatcattcatcaagttttggatgtcttcttgaacagtataacaacccaaaggatcacggaggcatccgagacacttgg 4417291  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| |||||||| ||| |||||||||||||| || ||||||||||||||    
T  4417290 catgatcatggctgaacagagaggctttgcacagcttgatgtgtagaggtaccagaggagttgc 4417227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 28339773 - 28339610
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | | ||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  28339773 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 28339674  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  28339673 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 28339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 32439625 - 32439460
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||| |  |||||| ||| ||||||||||||||  || ||||| || || | ||||||||||||||| ||| | |||||| ||||    |    
T  32439625 acatcactgacagtaaggtaattgccgtccatcaagctctggacatcgttttggacgacatggcaacccaaaggattgcgggaacattcttggcactcag 32439526  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||| ||||||||  | || ||||| | |||||| || ||||||||||||||||||||||    
T  32439525 catgatcatgttcaaacaataaagcctggcacaacttgatatggagtggcaccagaggagttgcaa 32439460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 5014183 - 5014020
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| || ||||| | ||||||| | | |||||||||||||| |||||  ||| | || ||  |||    
T  5014183 acatcactgacagtcagaagattatcattcatcaagctttgaatgtcgtcttgaacagcatggcaacccaaaggatcacggagacatcccagacacttgg 5014084  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  5014083 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 5014020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 47023924 - 47023761
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  47023924 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 47023825  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| | ||||| ||| |||| ||  |||||||||||||| || ||||||||||||||    
T  47023824 catgatcatgattaaacagagaagctttgcgcagcttgatgtgtagaggtaccagaggagttgc 47023761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 182
Target Start/End: Complemental strand, 5467394 - 5467293
Alignment:
Q  81 gcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    |||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||    
T  5467394 gcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagtt 5467295  T
Q  181 gc 182  Q
    ||    
T  5467294 gc 5467293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 5596144 - 5596309
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| || || |||| |||| ||  |||    
T  5596144 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtataacaacccaaaggatcacagaggcatcctagacacttgg 5596243  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| ||||||| ||| || |||||||||||||| ||||    
T  5596244 catgatcatggctgaacagagaagctttgcacagcttgacgtgcagaggcaccagaggagtggcaa 5596309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 18225662 - 18225499
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||| ||| |||||||| | ||||||    || ||||||||||||| ||||| |||| |||| ||  |||    
T  18225662 acatcactgacagtcagaagattatcattcatcaggctttggatgtcttcttgaacggtataacaacccaaaggatcacggaggcatcctagacacttgg 18225563  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || || ||||||||||||||    
T  18225562 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggtaccagaggagttgc 18225499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 31964260 - 31964423
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | | ||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  31964260 acatctctgacagtcagaagattatcatccatcaagctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 31964359  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   ||||  || |||| ||| ||||||||||| || |||||||||||||||||    
T  31964360 catgctcatggctgaacagggaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 31964423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 20066485 - 20066349
Alignment:
Q  48 catcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttgg 147  Q
    ||||||||||||||  || ||||| || || | ||||||||||||||| ||| | |||||| ||||     |||||||||| ||||||||  | ||||||    
T  20066485 catcaagctctggacatcgttttggacgacatggcaacccaaaggattgcgggaacattcttggcattcaacatgatcatgttcaaacaataaagcttgg 20066386  T
Q  148 catagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    || | |||||| || ||||| ||||||||||||||||    
T  20066385 cacaacttgatatggagtggtaccagaggagttgcaa 20066349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 7997033 - 7996870
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||| ||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  7997033 acatcactgacagtcagaagattatcattcatcaggctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 7996934  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||    |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  7996933 catgatcatgactgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 7996870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 10643541 - 10643378
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||| ||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  10643541 acatcactgacagtcagaagattatcattcatcaggctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 10643442  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||    |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  10643441 catgatcatgactgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 10643378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 182
Target Start/End: Original strand, 4346536 - 4346637
Alignment:
Q  81 gcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    ||||||||| |||||||  | |||| |||| ||  ||||||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||    
T  4346536 gcaacccaagggattacaaaggcatcctagacacttggcatgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagtt 4346635  T
Q  181 gc 182  Q
    ||    
T  4346636 gc 4346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 182
Target Start/End: Original strand, 22870705 - 22870806
Alignment:
Q  81 gcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    ||||||||| |||||||  | |||| |||| ||  ||||||||||||||   |||| ||| |||| ||| |||||||||||||  |||||||||||||||    
T  22870705 gcaacccaagggattacaaaggcatcctagacacttggcatgatcatggctgaacagagaagctttgcacagcttgatgtgtaaaggcaccagaggagtt 22870804  T
Q  181 gc 182  Q
    ||    
T  22870805 gc 22870806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 182
Target Start/End: Original strand, 22885764 - 22885865
Alignment:
Q  81 gcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    ||||||||| |||||||  | |||| |||| ||  ||||||||||||||   |||| ||| |||| ||| |||||||||||||  |||||||||||||||    
T  22885764 gcaacccaagggattacaaaggcatcctagacacttggcatgatcatggctgaacagagaagctttgcacagcttgatgtgtaaaggcaccagaggagtt 22885863  T
Q  181 gc 182  Q
    ||    
T  22885864 gc 22885865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 17984772 - 17984906
Alignment:
Q  48 catcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttgg 147  Q
    ||||||||| |||||||| | ||||||||  | |||||||| ||||||||| | |||| |||| ||  |||||||||||||    |||| ||| ||||      
T  17984772 catcaagctttggatgtcgtcttgaacaatatggcaacccagaggattacgaaggcatcctagacacttggcatgatcatgactgaacagagaagcttta 17984871  T
Q  148 catagcttgatgtgtagtggcaccagaggagttgc 182  Q
    || |||||||| || || || ||||||||||||||    
T  17984872 cacagcttgatatgcagaggtaccagaggagttgc 17984906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 19456155 - 19456322
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||| ||    
T  19456155 gacatcgctgacagtcaaataattgtcgttcatcaaactctggatatcattttgaacaacgtagcaacccaaaggattacagaagcattccgggcaactg 19456254  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19456255 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcactagaggagttgcaat 19456322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 21702898 - 21703065
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  21702898 gacatcgctgacagtcaaataattgccgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctgggcaattg 21702997  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 185  Q
    | |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21702998 gtatgatcgtggttaaacagagaggcttggcatagcttgatgtgtagaggcaccagaggagttgcaat 21703065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 27119187 - 27119028
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  27119187 tgacagtcagataattgtcgttcatcaggctctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 27119088  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaat 185  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  27119087 atggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttgcaat 27119028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 22925766 - 22925925
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||||| ||||| ||||||    
T  22925766 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaagaattacagaatcattcttggcaattggcat 22925865  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  22925866 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 22925925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 3785153 - 3784995
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  3785153 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 3785054  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  3785053 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 3784995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 31891070 - 31891228
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  31891070 tgacagtcagataattgtcgttcatcagtctctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 31891169  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||    
T  31891170 atggtcaaacagagaggcttggcataactcgatgtgtggtggcaccagaggagttgcaa 31891228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 34157509 - 34157351
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  34157509 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 34157410  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  34157409 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 34157351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 16164105 - 16163940
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  || |||||| ||||| ||||||    
T  16164105 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattacataatcattcttggcaattggcat 16164006  T
Q  122 gatcatggtcaaaca---aagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||||||   | ||||||||||||| || |||||||||||||||||||||||||||||    
T  16164005 gatcatggtcaaacagagaggaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 16163940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 34303045 - 34303203
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||| |||||||| ||  ||||| | ||||| ||||||||||    
T  34303045 tgacagtcagataattgtcgttgatcaggctctggatgtcattctgaacaacgtagcaaccccaaggattatggcggcattttgggcaattggcatgatc 34303144  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34303145 attgtcaaacaaggaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 34303203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 28882721 - 28882557
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  28882721 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 28882622  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  28882621 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 28882557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 12656049 - 12655885
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | | || |||||||  ||    
T  12656049 gacatcactcacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggtatcctaggcacttg 12655950  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  ||||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  12655949 gcatgatcatggctaaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 12655885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 20838425 - 20838261
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||    ||||||||||||||||||| | |||| |||||||  ||    
T  20838425 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtaaagcaacccaaaggattacgaaggcatcctaggcacttg 20838326  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  20838325 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 20838261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 27434178 - 27434342
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||    ||||||||||||||||||| | |||| |||||||  ||    
T  27434178 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtaaagcaacccaaaggattacgaaggcatcctaggcacttg 27434277  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  27434278 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 27434342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 34286860 - 34286695
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| |||||||||||||| |||||||| | |||||||   | |||||||||||||||||||| |||| |||| ||  |||    
T  34286860 acatcactgacagtcagaaaattatcgttcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggattacggaggcatcctagacacttgg 34286761  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||||    
T  34286760 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgcaa 34286695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 34291920 - 34291755
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| |||||||||||||| |||||||| | |||||||   | |||||||||||||||||||| |||| |||| ||  |||    
T  34291920 acatcactgacagtcagaaaattatcgttcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggattacggaggcatcctagacacttgg 34291821  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||||    
T  34291820 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgcaa 34291755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 23128300 - 23128464
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| ||||| |||| ||||| |   |||||||||||||||||||| | |||| |||||||  ||    
T  23128300 gacatcactgacagtcaaaaaattatcattcatcaagctttggatatcatcttgaatagtatagcaacccaaaggattacgaaggcatcctaggcacttg 23128399  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| ||||||||||||||  |||||| |||||||||    
T  23128400 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaagcaccaaaggagttgc 23128464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 27777728 - 27777565
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  27777728 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 27777629  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  27777628 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 27777565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 27804213 - 27804050
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  27804213 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 27804114  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  27804113 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 27804050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 27817486 - 27817323
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  27817486 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 27817387  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  27817386 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 27817323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 12587316 - 12587153
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | | ||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  12587316 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 12587217  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  12587216 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 12587153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 13936279 - 13936442
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | ||||||||||||||  |||| |||| |||| ||  |||    
T  13936279 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcgcggaggcatcctagacatttgg 13936378  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  13936379 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 13936442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 37375667 - 37375504
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||||||| | |||| |||| ||  |||    
T  37375667 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggattacgaaggcatcctagacacttgg 37375568  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   |||| ||| |||| ||| || ||||||||||| |||||||||||||||||    
T  37375567 catgttcatggctgaacagagaagctttgcacagtttgatgtgtagaggcaccagaggagttgc 37375504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 32050304 - 32050141
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   |||||||||||||||| |||||  ||| | || ||  |||    
T  32050304 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggatcacggagacatcccagacacttgg 32050205  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| | ||||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  32050204 catgatcatgattaaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 32050141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 39051557 - 39051720
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||  | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  39051557 acatcactgacagtcagaagattatcattcatcaagctttggatgttgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 39051656  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   | || ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  39051657 catgatcatggctgatcagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 39051720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 39890580 - 39890417
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||  |||||||| | ||||||||| | |||||||||||||| ||||| |||| |||| ||  |||    
T  39890580 acatcactgacagtcagaagattatcatccatcaagccttggatgtcgtcttgaacaacatggcaacccaaaggatcacggaggcatcctagacacttgg 39890481  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  39890480 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 39890417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 12716337 - 12716500
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  12716337 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 12716436  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| ||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  12716437 catgctcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 12716500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 19416234 - 19416397
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||| ||| |||||||| | |||||||   |||||||||||||||| |||||  ||| | || ||  |||    
T  19416234 acatcactgacagtcagaagattatcattcatcaggctttggatgtcttcttgaacagtatagcaacccaaaggatcacggagacatcccagacacttgg 19416333  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| | ||||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  19416334 catgatcatgattaaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 19416397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 9349717 - 9349879
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | | ||||| | | ||||||||||| || ||||| |||| |||| ||  |||    
T  9349717 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtctcgaacagcatggcaacccaaagaatcacggaggcatcctagacacttgg 9349816  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| ||||||||||| ||||    
T  9349817 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggggttg 9349879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 260488 - 260649
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   | |||||||||||||| ||||| |||| |||| ||  |||    
T  260488 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggatcacggaggcatcctagacacttgg 260587  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    ||||||| |||   |||| ||| |||| ||| |||||||||||||| || ||||||||||||    
T  260588 catgatcgtggctgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagtt 260649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 11634948 - 11635084
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | |||||||   || ||||||||||||| ||||| |||| | || ||  ||||||||||||||   |||| ||| ||||    
T  11634948 ttcatcaagctttggatgtcgtcttgaacagtataacaacccaaaggatcacggaggcatcccagacacttggcatgatcatggctgaacagagaagctt 11635047  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     ||| |||||||||||||| || ||||||||||||||    
T  11635048 tgcacagcttgatgtgtagaggtaccagaggagttgc 11635084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 11641137 - 11641273
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | |||||||   || ||||||||||||| ||||| |||| | || ||  ||||||||||||||   |||| ||| ||||    
T  11641137 ttcatcaagctttggatgtcgtcttgaacagtataacaacccaaaggatcacggaggcatcccagacacttggcatgatcatggctgaacagagaagctt 11641236  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     ||| |||||||||||||| || ||||||||||||||    
T  11641237 tgcacagcttgatgtgtagaggtaccagaggagttgc 11641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 21676944 - 21677080
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| ||||| ||   ||||||| | | |||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  21676944 ttcatcaagctttggatatcgccttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacagagaagctt 21677043  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     ||| |||||||||||||  |||||||||||||||||    
T  21677044 tgcacagcttgatgtgtaaaggcaccagaggagttgc 21677080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 16829073 - 16829236
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  16829073 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 16829172  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  16829173 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 16829236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 16892408 - 16892245
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  16892408 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 16892309  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  16892308 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 16892245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 34862186 - 34862023
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  34862186 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 34862087  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  34862086 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 34862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 37685644 - 37685807
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  37685644 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 37685743  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  37685744 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 37685807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 37700909 - 37701072
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  37700909 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 37701008  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  37701009 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 37701072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 37925999 - 37925836
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  37925999 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 37925900  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  37925899 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 37925836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 40233990 - 40233856
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| |  ||||||   | |||||||||||||||||||| |||| | || ||  ||||||||||||||   |||| ||| ||||    
T  40233990 ttcatcaagctttggatgtcgtcctgaacagtatggcaacccaaaggattacggaggcatcccagacacttggcatgatcatggctgaacagagaagctt 40233891  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
     ||| || ||||||||||| || ||||||||||||    
T  40233890 tgcacagtttgatgtgtagaggtaccagaggagtt 40233856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 31876788 - 31876624
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||| |  ||| || ||||||||||| || ||||| | ||||||| | | |||||||||||| | |||||  ||| | || ||  ||    
T  31876788 gacatcactgacagtcagaagattatcattcatcaagctttgaatgtcgtcttgaacagcatggcaacccaaagggtcacggagacatcccagacacttg 31876689  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||| |  |||| |||  ||| ||| |||||||||||||| || ||||||||||||||    
T  31876688 gcatgatcatgattgaacagagaaactttgcacagcttgatgtgtagaggtaccagaggagttgc 31876624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 124; Significance: 5e-64; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 2403 - 2566
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||| ||| |||||| | ||| ||    
T  2403 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcgttttgaacaacgcagtaacccaaaggattacagaaacattctggacaactg 2502  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  2503 gcatgatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 2566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 5e-64; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 18711093 - 18710934
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  18711093 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 18710994  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  18710993 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 18710934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 44563606 - 44563447
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  44563606 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 44563507  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  44563506 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 44563447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 19658752 - 19658910
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  19658752 tgacagtcagataattgtcgttcatcaggctctggatgtcattttgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 19658851  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  19658852 atggtcaaacagagaggcttggcataacttgatgggtagtggcaccagaggagttgcaa 19658910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 33245168 - 33245010
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  33245168 tgacagtcagataattgtcgttcatcaggctctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 33245069  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  33245068 atggtcaaacagagaggcttggcataatttgatgtgtagtggcaccataggagttgcaa 33245010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 22080586 - 22080748
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||| ||  ||||||| | ||| ||||||    
T  22080586 tcgctgatagtcagataattgtcgttcatcaggctctggatatcattctgaacaacgtagcaaccccaaggattatggcggcattctggacaattggcat 22080685  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  22080686 gatcatggtcaaacaaggaggcttggcatagcttgatgtgtagcggtaccagaggagttgcaa 22080748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 16283960 - 16283797
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||| ||    
T  16283960 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcaaatg 16283861  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    | ||||||||||  ||||| ||| |||| |||||||||||||||||| ||||||||||||||||    
T  16283860 gtatgatcatggctaaacagagaagctttgcatagcttgatgtgtagaggcaccagaggagttg 16283797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 16278065 - 16277901
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||   ||||||| |||||||||||| | |||| |||||||  ||    
T  16278065 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaactcaaaggattacgaaggcatcctaggcacttg 16277966  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  ||||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  16277965 gcatgatcatggctaaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 16277901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 2136963 - 2137127
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || |||||||||  ||| || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  2136963 gacatcactaacagtcaaaagattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 2137062  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  2137063 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 2137127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 14558135 - 14557971
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  14558135 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 14558036  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||    |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  14558035 gcatgatcatgactgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 14557971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 19688601 - 19688445
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||| ||||| |||| || ||||||||||| |||||||||| ||| |||   |||||||||||||||||||| | |||| |||||||  ||||||||||    
T  19688601 tgacattcaaaaaattatcattcatcaagctttggatgtcatcttggacagtatagcaacccaaaggattacgaaggcatcctaggcacttggcatgatc 19688502  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  19688501 atggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 19688445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 27608609 - 27608773
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||| | |||||||    ||||||||||||||||||| | |||| |||||||  ||    
T  27608609 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcgtcttgaacagtaaagcaacccaaaggattacgaaggcatcctaggcacttg 27608708  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   || |  || |||| ||| |||||||||||||| |||||||||||||||||    
T  27608709 gcatgatcatggctgaatagggaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 27608773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 18791218 - 18791107
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||| ||  ||||||||||||||||||||| | |||| |||||||  ||    
T  18791218 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgagcagtgtagcaacccaaaggattacgaatgcatcctaggcacttg 18791119  T
Q  118 gcatgatcatgg 129  Q
    ||||||||||||    
T  18791118 gcatgatcatgg 18791107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 19674951 - 19674788
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  19674951 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 19674852  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  19674851 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 19674788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 3329239 - 3329377
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | |||||||   | |||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  3329239 ttcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacagagaagctt 3329338  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
     ||| |||||||||||||| |||||||||||||| ||||    
T  3329339 tgcacagcttgatgtgtagaggcaccagaggagtggcaa 3329377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 19286945 - 19286807
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | |||||||   | ||||||||| |||||||| | |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  19286945 ttcatcaagctttggatgtcgtcttgaacagtatggcaacccaagggattacgaaggcatcctagacatttggcatgatcatggctgaacagagaagctt 19286846  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
     ||| |||||||||||||| |||||||||||||| ||||    
T  19286845 tgcacagcttgatgtgtagaggcaccagaggagtggcaa 19286807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 29829832 - 29829667
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | |||||||   ||||| |||||||||| ||||| |||| |||| ||  |||    
T  29829832 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagtatagcagcccaaaggatcacggaggcatcctagacacttgg 29829733  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||| ||||    
T  29829732 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagtggcaa 29829667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 12092429 - 12092589
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| ||||| |||| | |||| || ||||||||||| |||||||| | ||||||| | | ||||||||||| || ||||| |||| |||| ||  ||     
T  12092429 acatcactgacggtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaagaatcacggaggcatcctagacacttgt 12092528  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagt 179  Q
    |||||||||||   |||| ||| |||| |||||||||||| || || ||||||||||||||    
T  12092529 catgatcatggctgaacagagaagctttgcatagcttgatatgcagaggcaccagaggagt 12092589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 19208065 - 19208228
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  19208065 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 19208164  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  19208165 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 19208228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 28361660 - 28361823
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  28361660 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 28361759  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  28361760 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 28361823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 33259233 - 33259070
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| || ||||| | ||||||| | | |||||||||||||| |||||  ||| | || ||  |||    
T  33259233 acatcactgacagtcagaagattatcattcatcaagctttgaatgtcgtcttgaacagcatggcaacccaaaggatcacggagacatcccagacacttgg 33259134  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  33259133 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 33259070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 31489455 - 31489618
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | |||||||   ||||| ||||||||||  | || |||| |||| ||  |||    
T  31489455 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagtatagcagcccaaaggatcccagaggcatcctagacacttgg 31489554  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  31489555 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 31489618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 189521 - 189441
Alignment:
Q  102 gcattctaggcaagtggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||| |||||||  ||||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  189521 gcatcctaggcacttggcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 189441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 9355133 - 9354970
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||| ||| |||||||| |  ||||||   | ||||||||| |||||||  | |||| |||| ||  |||    
T  9355133 acatcactgacagtcagaagattatcattcatcaggctttggatgtcgtcctgaacagtatggcaacccaagggattacaaaggcatcctagacacttgg 9355034  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||  |||||||||||||||||    
T  9355033 catgatcatggctgaacagagaagctttgcacagcttgatgtgtaaaggcaccagaggagttgc 9354970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 31355005 - 31354871
Alignment:
Q  48 catcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttgg 147  Q
    ||||| ||| |||||||| | | ||||| | | |||||||||||||| ||||| |||| |||| ||  ||||||| ||||||   ||||  || |||| |    
T  31355005 catcaggctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggaggcatcctagacacttggcatgctcatggctgaacagggaagctttg 31354906  T
Q  148 catagcttgatgtgtagtggcaccagaggagttgc 182  Q
    || ||||||||||| || |||||||||||||||||    
T  31354905 cacagcttgatgtgcagaggcaccagaggagttgc 31354871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 5e-64; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 14142977 - 14143136
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  14142977 tcgctgacagtcaaataattgttgttcatcaagctctggatgtcattttaaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 14143076  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  14143077 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 14143136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 26788448 - 26788289
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  26788448 tcgctgacagtcaaataattgttgttcatcaagctctggatgtcattttaaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 26788349  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  26788348 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 26788289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 27196821 - 27196662
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  27196821 tcgctgacagtcaaataattgttgttcatcaagctctggatgtcattttaaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 27196722  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  27196721 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 27196662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 27252419 - 27252578
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |||||| ||||| ||||||    
T  27252419 tcgctgacagtcaaataattgttgttcatcaagctctggatgtcattttaaacaacgcagcaacccaaaggattacagaatcattcttggcaattggcat 27252518  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  27252519 gatcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 27252578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 13521765 - 13521924
Alignment:
Q  22 tcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcat 121  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||| ||||| ||||||    
T  13521765 tcgctgacagtcaaatgattgttgttcatcaagctctggatgtcattttgaacaacgcaacaacccaaaggattacagaatcattcttggcaattggcat 13521864  T
Q  122 gatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    | ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  13521865 ggtcatggtcaaacagagaggcttggcataacttgatgtgtagtggcaccagaggagttg 13521924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 8892007 - 8892165
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  8892007 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 8892106  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  8892107 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 8892165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 8903242 - 8903400
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  8903242 tgacagtcagataattgtcgttcatcagtttctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 8903341  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  8903342 atggtcaaacagagaggcttggcataactcgatgtgtagtggcaccagaggagttgcaa 8903400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 22456634 - 22456774
Alignment:
Q  21 atcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggca 120  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| | ||| |||||    
T  22456634 atcgctgacagtcaaataattgtcgttcatcaatctctggatgtcgttttgaacaacgtagcaacccaaaggattacagaagcattctggacaattggca 22456733  T
Q  121 tgatcatggtcaaacaaagaggcttggcatagcttgatgtg 161  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  22456734 tgatcatggtcaaacaaagaagctttgcatagcttgatgtg 22456774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 28163157 - 28162999
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||||| ||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  28163157 tgacagtcagataattgtcgttcatcagtctctggatgtcattctgaacaccgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 28163058  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||    
T  28163057 atggtcaaacagagaggcttggcataacccgatgtgtagtggcaccagaggagttgcaa 28162999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 33373952 - 33374110
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  33373952 tgacagtcagataattgtcgttcatcagtctctggatgtcattctgaacaacgtagcaaccccaaggattatggaagcattctgggcaactggcatgatc 33374051  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
     |||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||    
T  33374052 gtggtcaaacagagaggcttggcataacccgatgtgtagtggcaccagaggagttgcaa 33374110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 17092129 - 17092294
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| || ||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| ||| | ||||| ||     
T  17092129 acatcactaacagtcagatagttgtcgttcatcaagccctggatgtcattttgaacaatgtagcaacccaaaggatcacggaagtattatgggcaactgc 17092228  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
     ||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  17092229 tatgatcatggtcaaacaaagaggcttgacatagcttgatgtttagaggcaccagaggagttgcaa 17092294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 13298639 - 13298803
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||   || ||||||||||||||| | | |||| |||||||  ||    
T  13298639 gacatcactgacagtcaaataattgtcattcatcaagctctggatgtcattttgaacagtataccaacccaaaggattatgaaggcatcctaggcacttg 13298738  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  ||||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  13298739 gcatgatcatggctaaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 13298803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 26918881 - 26918724
Alignment:
Q  25 ctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgat 124  Q
    |||||||||||| |||| || ||||||||||| ||||||| || |||||||   |||||||||||||||||||| | |||| |||||||  |||||||||    
T  26918881 ctgacagtcaaaaaattatcattcatcaagctttggatgttatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttggcatgat 26918782  T
Q  125 catggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  26918781 catggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 26918724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 27272268 - 27272430
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| | || || |||||||||||||||||||||| ||||||||   ||||||||||||||||||||| |||| |||||||  ||    
T  27272268 gacatcactaacagtcaaaaacttatcattcatcaagctctggatgtcatcttgaacaataaagcaacccaaaggattacggaggcatcctaggcacttg 27272367  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    ||||||||||||   |||| ||| |||| ||| | |||||| ||||| |||||||||||||||    
T  27272368 gcatgatcatggctgaacagagaagctttgcacaacttgatatgtagaggcaccagaggagtt 27272430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 15424005 - 15424169
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||   |    
T  15424005 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcactcg 15424104  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  15424105 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 15424169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 22934568 - 22934732
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| ||||||     ||||||||||||||||||| | |||| |||||||  ||    
T  22934568 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacggtaaagcaacccaaaggattacgaaggcatcctaggcacttg 22934667  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| ||||||| |||||||||    
T  22934668 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccaaaggagttgc 22934732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 23857013 - 23857177
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||| |||||||||| ||||||     ||||||||||||||||||| | |||| |||||||  ||    
T  23857013 gacatcactgacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacggtaaagcaacccaaaggattacgaaggcatcctaggcacttg 23857112  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| |||||||||||||| ||||||| |||||||||    
T  23857113 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccaaaggagttgc 23857177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 27290058 - 27290222
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  27290058 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 27290157  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  27290158 gcatgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 27290222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 16750361 - 16750198
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| || ||||||||| |||| || ||||||||||| |||||||| | |||||||  ||||||||||||||||||||| | |||| |||| ||  |||    
T  16750361 acatcactaacagtcaaaaaattatcattcatcaagctttggatgtcgtcttgaacagtgtagcaacccaaaggattacgaaggcatcctagacacttgg 16750262  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| |||  ||||||||||||| |||||||||||||||||    
T  16750261 catgatcatggctgaacagagaagctttgcaccgcttgatgtgtagaggcaccagaggagttgc 16750198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 29549982 - 29549819
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || | ||||||||| |||||||| | ||||||| | | |||||||||||||||||| | |||| |||||||  |||    
T  29549982 acatcactgacagtcagaaaattatcatccatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggattacgaaggcatcctaggcacttgg 29549883  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  29549882 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 29549819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 26989510 - 26989345
Alignment:
Q  18 gacatcgctgacagtcaaataattg-tcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagt 116  Q
    |||||| || ||||||||| ||||  || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  |    
T  26989510 gacatcactaacagtcaaaaaattaatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcactt 26989411  T
Q  117 ggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||||  ||||| ||| |||| ||| |||||||||||||| | |||||||||||||||    
T  26989410 ggcatgatcatggctaaacagagaagctttgcacagcttgatgtgtagagacaccagaggagttgc 26989345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 24864225 - 24864061
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||| ||||| |||||||    ||||||||||||||||||| | |||| |||||||  ||    
T  24864225 gacatcactaacagtcaaaaaattatcattcatcaagctttggacgtcatcttgaacagtaaagcaacccaaaggattacgaaggcatcctaggcacttg 24864126  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||   |||| ||||| || ||| ||||||||||| || |||||||||||||||||    
T  24864125 gcatgatcatggctgaacagagaggatttgcacagcttgatgtgcagaggcaccagaggagttgc 24864061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 24304306 - 24304469
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || |||||||||  ||| || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  ||    
T  24304306 gacatcactaacagtcaaaagattatcattcatcaagctttggatgtcgtcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttg 24304405  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttg 181  Q
    ||||| ||||||   |||| ||| |||| ||| |||||||||||||| ||||||||||||||||    
T  24304406 gcatggtcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttg 24304469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 34463035 - 34463198
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  34463035 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 34463134  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  34463135 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 34463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 27485609 - 27485473
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  27485609 ttcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacagagaagctt 27485510  T
Q  146 ggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
     ||| |||||||||||||| |||||||||||||||||    
T  27485509 tgcacagcttgatgtgtagaggcaccagaggagttgc 27485473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 3696588 - 3696425
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    |||||||||||||||| | |||| || ||||||||||| |||||||| | |||||||   | |||||||||||||| ||| | |||| |||| ||  |||    
T  3696588 acatcgctgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggatcacgaaggcatcctagacacttgg 3696489  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||| |||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  3696488 catgatcgtggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 3696425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 27019643 - 27019480
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||   || |||| ||||| |||||| | |||| |||||||  |||    
T  27019643 acatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtataacaactcaaagcattacgaaggcatcctaggcacttgg 27019544  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||| ||||||||    
T  27019543 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccaggggagttgc 27019480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 26116099 - 26116259
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| ||||||||| | || |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  26116099 acatcactgacagtcagaagattatcgttcatcgaactttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 26116198  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagt 179  Q
    |||||||||||   |||| ||| |||| ||| |||||||| ||||| ||||||||||||||    
T  26116199 catgatcatggctgaacagagaagctttgcacagcttgatatgtagaggcaccagaggagt 26116259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 4758244 - 4758114
Alignment:
Q  46 ttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggctt 145  Q
    ||||||||||| |||||||| | ||||||| | | |||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||| ||| ||||    
T  4758244 ttcatcaagctttggatgtcgtcttgaacagcatggcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacagagaagctt 4758145  T
Q  146 ggcatagcttgatgtgtagtggcaccagagg 176  Q
     ||| ||||||||||| || |||||||||||    
T  4758144 tgcacagcttgatgtgcagaggcaccagagg 4758114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 4545464 - 4545629
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  |||    
T  4545464 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttgg 4545563  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||| ||||    
T  4545564 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagtagcaa 4545629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 4723823 - 4723988
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | ||| ||||||||||  |||| |||| |||| ||  |||    
T  4723823 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcagcccaaaggatctcggaggcatcctagacacttgg 4723922  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||| ||||    
T  4723923 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagtagcaa 4723988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 16674646 - 16674485
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   | |||||||||||||| ||||| |||| |||| ||  |||    
T  16674646 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatggcaacccaaaggatcacggaggcatcctagacacttgg 16674547  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    |||||||||||   || | ||| |||| ||| |||||||||||||| || ||||||||||||    
T  16674546 catgatcatggctgaatagagaagctttgcacagcttgatgtgtagaggtaccagaggagtt 16674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 4773513 - 4773353
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  |||    
T  4773513 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttgg 4773414  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagt 179  Q
    |||||||||||   |||| |||||||| ||| ||||||| ||| || ||||||||||||||    
T  4773413 catgatcatggctgaacagagaggctttgcacagcttgacgtgcagaggcaccagaggagt 4773353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 16943716 - 16943879
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| || ||||| | ||||||| | | |||||||||||||| |||||  ||| | || ||  |||    
T  16943716 acatcactgacagtcagaagattatcattcatcaagctttgaatgtcgtcttgaacagcatggcaacccaaaggatcacggagacatcccagacacttgg 16943815  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  16943816 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 16943879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 29573520 - 29573357
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  29573520 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 29573421  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  29573420 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 29573357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 30557705 - 30557868
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  30557705 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 30557804  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  30557805 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 30557868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 27359680 - 27359846
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||| |  ||| || | ||||| ||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  ||    
T  27359680 gacatcactgacagtcagaagattatcatccatcaggctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttg 27359779  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||||   |||| |||||||| |||||||||||| || || |||||||||||||| ||||    
T  27359780 gcatgatcatggctgaacagagaggctttgcatagcttgatatgcagaggcaccagaggagtggcaa 27359846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 27450023 - 27450189
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||| |  ||| || | ||||| ||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  ||    
T  27450023 gacatcactgacagtcagaagattatcatccatcaggctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttg 27450122  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||||   |||| |||||||| |||||||||||| || || |||||||||||||| ||||    
T  27450123 gcatgatcatggctgaacagagaggctttgcatagcttgatatgcagaggcaccagaggagtggcaa 27450189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 27044895 - 27044730
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||| ||||| |||||||| | |||||||   | ||||||||| |||||||| | |||| |||| ||  |||    
T  27044895 acatcactgacagtcagaagattatcattcattaagctttggatgtcgtcttgaacagtatggcaacccaagggattacgaaggcatcctagacacttgg 27044796  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| |||||||| ||||| |||||||||||||| ||||    
T  27044795 catgatcatggctgaacagagaagctttgcacagcttgatatgtagaggcaccagaggagtggcaa 27044730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 28207961 - 28207796
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | ||||||||||| || ||||| |||| |||| ||  ||     
T  28207961 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaagaatcacggaggcatcctagacacttgt 28207862  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| |||||||||||| || || |||||||| ||||| ||||    
T  28207861 catgatcatggctgaacagagaagctttgcatagcttgatatgcagaggcaccaggggagtggcaa 28207796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 4525793 - 4525628
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||| ||| |||||||| | |||||||   | |||||||||||||| ||||| |||| |||| ||  |||    
T  4525793 acatcactgacagtcagaagattatcatccatcaggctttggatgtcgtcttgaacagtatggcaacccaaaggatcacggaggcatcctagacacttgg 4525694  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| |||||||||||| || || |||||||| ||||| ||||    
T  4525693 catgatcatggctgaacagagaagctttgcatagcttgatatgcagaggcaccaggggagtggcaa 4525628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 27008234 - 27008069
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||| ||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  |||    
T  27008234 acatcactgacagtcagaagattatcatccatcaggctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttgg 27008135  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||| ||||    
T  27008134 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagtggcaa 27008069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 29501922 - 29501759
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||| ||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  |||    
T  29501922 acatcactgacagtcagaagattatcatccatcaggctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttgg 29501823  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || || ||||||||||||||    
T  29501822 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggtaccagaggagttgc 29501759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 26777299 - 26777437
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | |||||||   ||||| |||||||||| || || |||| |||| ||  |||    
T  26777299 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtcttgaacagtatagcagcccaaaggatcacagaggcatcctagacacttgg 26777398  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttga 157  Q
    |||||||||||   |||| |||||||| ||| |||||||    
T  26777399 catgatcatggctgaacagagaggctttgcacagcttga 26777437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 22064 - 21906
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||  ||||||| ||||| ||||||||||    
T  22064 tgacaatcagataattgtcgttcatcaggctctggatgtcattctgaacaacgtagcaaccccaaggattatggcggcattctgggcaattggcatgatc 21965  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  21964 atggtcaaacaaggaggcttggcatagcttgatgtgtagcggtaccagaggagttgcaa 21906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 364 - 529
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    |||||||||||||| | ||||||||| ||||||| ||||||||||||||| ||||||||||| |||||| |||||||| ||  ||||| | ||||| |||    
T  364 acatcgctgacagtaagataattgtcattcatcaggctctggatgtcattctgaacaacgtaacaaccccaaggattatggcggcattatgggcaattgg 463  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||    
T  464 catgatcatggtcaaacaaggagacttggcatagcttgatgtgtagcggtaccagaggagttgcaa 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 81; Significance: 2e-38; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 46730 - 46894
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||||| |||| || ||||||||||  |||||||||| |||||||  ||||||||||||||||||||| | |||| |||||||  ||    
T  46730 gacatcactgacagtcaaaaaattatcattcatcaagccttggatgtcatcttgaacagtgtagcaacccaaaggattacgaaggcatcctaggcacttg 46829  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||||  ||||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  46830 gcatgatcatggctaaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 46894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 39822 - 39980
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatc 125  Q
    ||||||||||| |||| || ||| ||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||||||  ||||||||||    
T  39822 tgacagtcaaaaaattatcattcgtcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcacttggcatgatc 39921  T
Q  126 atggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    ||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||||    
T  39922 atggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgcaa 39980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 30274 - 30110
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| || ||||||||| |||| || ||||||||||| |||||||||| |||||||    |||||||||||||||| || | |||| |||||||  ||    
T  30274 gacatcactaacagtcaaaaaattatcattcatcaagctttggatgtcatcttgaacagtaaagcaacccaaaggattccgaaggcatcctaggcacttg 30175  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    || |||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  30174 gcgtgatcatggctgaacagagaagctttgcacagcttgatgtgtaggggcaccagaggagttgc 30110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 6524 - 6361
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||||| |||||||   |||||||||||||||||||| | |||| |||| ||  |||    
T  6524 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcatcttgaacagtatagcaacccaaaggattacgaaggcatcctagacacttgg 6425  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  6424 catgatcatggctgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 6361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 30964 - 30801
Alignment:
Q  18 gacatcgctgacagtcaaataa-ttgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagt 116  Q
    |||||| |||||||||||| || || || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  |    
T  30964 gacatcactgacagtcaaaaaaattatcattcatcaagctttggatgtcttcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcactt 30865  T
Q  117 ggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagtt 180  Q
    |||||||||||||  ||||| ||| |||| ||| |||||||||||||| |||||||||||||||    
T  30864 ggcatgatcatggctaaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagtt 30801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 10076 - 9911
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | ||||||| | | |||||| ||||||| ||||| |||| |||| ||  |||    
T  10076 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacctaaaggatcacggaggcatcctagacacttgg 9977  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| | |||||| ||| |||||||||||||| |||||||||||||| ||||    
T  9976 catgatcatggctgaacagaaaggctttgcacagcttgatgtgtagaggcaccagaggagtggcaa 9911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 27804 - 27639
Alignment:
Q  18 gacatcgctgacagtcaaataattg-tcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagt 116  Q
    |||||| || ||||||||| ||||  || ||||||||||| |||||||| | |||||||   |||||||||||||||||||| | |||| |||||||  |    
T  27804 gacatcactaacagtcaaaaaattaatcattcatcaagctttggatgtcctcttgaacagtatagcaacccaaaggattacgaaggcatcctaggcactt 27705  T
Q  117 ggcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||||  ||| | ||| |||| ||| | |||||||||||| |||||||||||||||||    
T  27704 ggcatgatcatggctaaatagagaagctttgcacaacttgatgtgtagaggcaccagaggagttgc 27639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 14675 - 14839
Alignment:
Q  18 gacatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtg 117  Q
    |||||| |||||||||| | | || || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  ||    
T  14675 gacatcactgacagtcagaaagttatcattcatcaagctttggatgtcctcttgaacagtataacaacccaaaggatcacggagacatcccagacacttg 14774  T
Q  118 gcatgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    ||||||||||| |  |||| ||| |||| ||| |||||||||||||| |||||||||||||||||    
T  14775 gcatgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggcaccagaggagttgc 14839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 8812 - 8975
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || | ||||||||| |||||||| | | ||||| | | |||||||||||||| ||||| |||| |||| ||  |||    
T  8812 acatcactgacagtcagaagattatcatccatcaagctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggaggcatcctagacacttgg 8911  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| ||||||||||| || |||||||||||||||||    
T  8912 catgatcatggctgaacagagaagctttgcacagcttgatgtgcagaggcaccagaggagttgc 8975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 20496 - 20362
Alignment:
Q  48 catcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtggcatgatcatggtcaaacaaagaggcttgg 147  Q
    ||||||||| |||||||| | | ||||| | | |||||||||||||| ||||| |||| |||| ||  ||||||||||||||   |||| ||| |||| |    
T  20496 catcaagctttggatgtcgtctcgaacagcatggcaacccaaaggatcacggaggcatcctagacacttggcatgatcatggctgaacagagaagctttg 20397  T
Q  148 catagcttgatgtgtagtggcaccagaggagttgc 182  Q
    || ||||||||||| || |||||||||||||||||    
T  20396 cacagcttgatgtgcagaggcaccagaggagttgc 20362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 25947 - 26110
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| | |||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| || || |||| |||| ||  |||    
T  25947 acatcactgacagtcagaaaattatcattcatcaagctttggatgtcctcttgaacagtataacaacccaaaggatcacagaggcatcctagacacttgg 26046  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||||   |||| ||| |||| ||| | |||||| ||||| |||||||||||||||||    
T  26047 catgatcatggctgaacagagaagctttgcacaacttgatatgtagaggcaccagaggagttgc 26110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 6985 - 7148
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | |||||||   || ||||||||||||| |||||  ||| | || ||  |||    
T  6985 acatcactgacagtcagaagattatcattcatcaagctttggatgtcttcttgaacagtataacaacccaaaggatcacggagacatcccagacacttgg 7084  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgc 182  Q
    |||||||||| |  |||| ||| |||| ||| |||||||||||||| || ||||||||||||||    
T  7085 catgatcatgattgaacagagaagctttgcacagcttgatgtgtagaggtaccagaggagttgc 7148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 119651 - 119706
Alignment:
Q  26 tgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtag 81  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  119651 tgacagtcagataattgtcgttcatcaggctctggatgtcattctgaacaacgtag 119706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 8459 - 8294
Alignment:
Q  19 acatcgctgacagtcaaataattgtcgttcatcaagctctggatgtcattttgaacaacgtagcaacccaaaggattacggaagcattctaggcaagtgg 118  Q
    ||||| |||||||||| |  ||| || ||||||||||| |||||||| | ||||||| | | ||||||||||| || ||||| |||| |||| ||  ||     
T  8459 acatcactgacagtcagaagattatcattcatcaagctttggatgtcgtcttgaacagcatggcaacccaaagaatcacggaggcatcctagacacttgt 8360  T
Q  119 catgatcatggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagaggagttgcaa 184  Q
    |||||||||||   |||| ||| |||| |||||||||||| || || |||||||| ||||| ||||    
T  8359 catgatcatggctgaacagagaagctttgcatagcttgatatgcagaggcaccaggggagtggcaa 8294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 46604 - 46707
Alignment:
Q  80 agcaacccaaa-ggattacggaagcattctaggcaagtggcatgat-catggtcaaacaaagaggcttggcatagcttgatgtgtagtggcaccagagga 177  Q
    ||||||||||| |||||||| | |||| |||||||  ||||||||| |||||   |||| ||| |||| ||| | |||||||||||| ||||||||||||    
T  46604 agcaacccaaaaggattacgaaggcatcctaggcacttggcatgattcatggctgaacagagaagctttgcacaacttgatgtgtagaggcaccagagga 46703  T
Q  178 gttg 181  Q
    ||||    
T  46704 gttg 46707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University