View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10991_low_4 (Length: 337)

Name: NF10991_low_4
Description: NF10991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10991_low_4
NF10991_low_4
[»] chr6 (40 HSPs)
chr6 (232-337)||(606390-606503)
chr6 (232-337)||(32327011-32327124)
chr6 (233-337)||(12170654-12170766)
chr6 (235-337)||(21426480-21426590)
chr6 (232-337)||(9341442-9341555)
chr6 (232-337)||(33052959-33053072)
chr6 (232-337)||(67792-67905)
chr6 (232-337)||(3913365-3913478)
chr6 (232-337)||(7514994-7515106)
chr6 (232-290)||(14174862-14174920)
chr6 (232-290)||(14179398-14179456)
chr6 (250-337)||(23128804-23128899)
chr6 (232-290)||(29319668-29319726)
chr6 (235-333)||(30894789-30894894)
chr6 (232-279)||(8497224-8497271)
chr6 (232-279)||(23947091-23947138)
chr6 (291-337)||(8102912-8102958)
chr6 (250-337)||(30608324-30608419)
chr6 (232-282)||(31851672-31851722)
chr6 (291-337)||(33110804-33110850)
chr6 (233-282)||(34185486-34185535)
chr6 (234-286)||(679364-679416)
chr6 (235-279)||(7880879-7880923)
chr6 (233-281)||(31297069-31297117)
chr6 (232-288)||(32060119-32060175)
chr6 (232-279)||(4984341-4984388)
chr6 (232-267)||(7028123-7028158)
chr6 (232-279)||(12653200-12653247)
chr6 (232-279)||(17237060-17237107)
chr6 (232-279)||(25064492-25064539)
chr6 (232-279)||(28634887-28634934)
chr6 (235-290)||(34018801-34018856)
chr6 (291-337)||(30776849-30776895)
chr6 (291-337)||(32802732-32802778)
chr6 (235-277)||(34489459-34489501)
chr6 (232-277)||(8027892-8027937)
chr6 (233-269)||(1450528-1450564)
chr6 (235-279)||(7875821-7875865)
chr6 (235-279)||(11321338-11321382)
chr6 (250-286)||(29744480-29744516)
[»] chr4 (54 HSPs)
chr4 (232-337)||(21686033-21686146)
chr4 (232-337)||(19853303-19853416)
chr4 (232-337)||(13634320-13634433)
chr4 (233-337)||(2520984-2521096)
chr4 (233-337)||(56040438-56040550)
chr4 (232-337)||(32766719-32766832)
chr4 (233-290)||(26633463-26633520)
chr4 (235-336)||(43510402-43510511)
chr4 (232-290)||(4142555-4142613)
chr4 (232-337)||(17949114-17949228)
chr4 (232-337)||(17952966-17953080)
chr4 (232-290)||(10258692-10258750)
chr4 (233-337)||(35348512-35348626)
chr4 (250-337)||(48257441-48257536)
chr4 (233-290)||(22611450-22611507)
chr4 (232-337)||(52097690-52097800)
chr4 (250-290)||(24098878-24098918)
chr4 (232-286)||(6155000-6155054)
chr4 (232-337)||(47320204-47320316)
chr4 (232-337)||(53444323-53444437)
chr4 (232-279)||(2115362-2115409)
chr4 (232-279)||(9284179-9284226)
chr4 (232-279)||(9528651-9528698)
chr4 (232-279)||(20569525-20569572)
chr4 (232-279)||(25274151-25274198)
chr4 (240-279)||(32952540-32952579)
chr4 (236-279)||(46990909-46990952)
chr4 (232-286)||(36161986-36162040)
chr4 (232-290)||(44596919-44596977)
chr4 (233-279)||(53616425-53616471)
chr4 (233-286)||(40065986-40066039)
chr4 (232-277)||(53811291-53811336)
chr4 (234-286)||(43853718-43853770)
chr4 (233-329)||(56156440-56156538)
chr4 (232-279)||(3335938-3335985)
chr4 (232-279)||(4644126-4644173)
chr4 (232-279)||(10359323-10359370)
chr4 (232-279)||(12265729-12265776)
chr4 (232-279)||(12493603-12493650)
chr4 (232-279)||(38706484-38706531)
chr4 (233-279)||(8670750-8670796)
chr4 (291-337)||(22611388-22611434)
chr4 (233-290)||(21662697-21662754)
chr4 (233-290)||(21671461-21671518)
chr4 (233-286)||(37465748-37465801)
chr4 (233-290)||(52979004-52979061)
chr4 (232-276)||(10389528-10389572)
chr4 (297-337)||(18935987-18936027)
chr4 (242-278)||(24100558-24100594)
chr4 (232-276)||(34024212-34024256)
chr4 (242-278)||(38943817-38943853)
chr4 (242-278)||(44374949-44374985)
chr4 (235-279)||(45227818-45227862)
chr4 (242-278)||(56236491-56236527)
[»] chr3 (62 HSPs)
chr3 (232-337)||(6954487-6954600)
chr3 (232-337)||(9797325-9797438)
chr3 (235-337)||(45568239-45568349)
chr3 (232-337)||(21533600-21533713)
chr3 (232-337)||(43017072-43017185)
chr3 (233-337)||(44959767-44959877)
chr3 (232-337)||(52922908-52923021)
chr3 (234-337)||(48650527-48650638)
chr3 (233-337)||(46304313-46304424)
chr3 (232-337)||(10108420-10108533)
chr3 (233-337)||(9998651-9998763)
chr3 (232-337)||(10229660-10229773)
chr3 (232-337)||(10233254-10233367)
chr3 (233-337)||(40487509-40487621)
chr3 (236-337)||(43488386-43488494)
chr3 (232-290)||(47041839-47041897)
chr3 (232-337)||(4711666-4711779)
chr3 (232-337)||(33580064-33580177)
chr3 (232-282)||(20464756-20464806)
chr3 (232-290)||(36910557-36910615)
chr3 (232-289)||(21431855-21431912)
chr3 (235-337)||(37040952-37041062)
chr3 (233-290)||(54149230-54149287)
chr3 (232-337)||(21313220-21313333)
chr3 (232-337)||(38545983-38546096)
chr3 (233-332)||(40556891-40556998)
chr3 (253-290)||(38859943-38859980)
chr3 (232-279)||(628715-628762)
chr3 (235-286)||(3085085-3085136)
chr3 (232-279)||(4178818-4178865)
chr3 (233-288)||(23799740-23799794)
chr3 (232-279)||(25162689-25162736)
chr3 (253-337)||(36461249-36461341)
chr3 (232-278)||(2342702-2342748)
chr3 (233-279)||(32607722-32607768)
chr3 (232-290)||(47896390-47896448)
chr3 (232-337)||(53807650-53807762)
chr3 (296-337)||(7546799-7546840)
chr3 (233-277)||(29503716-29503760)
chr3 (293-337)||(38142709-38142753)
chr3 (232-337)||(38854813-38854920)
chr3 (232-279)||(12116351-12116398)
chr3 (232-279)||(25631300-25631347)
chr3 (232-279)||(36906375-36906422)
chr3 (250-337)||(7448723-7448818)
chr3 (250-337)||(7456865-7456960)
chr3 (291-337)||(21289672-21289718)
chr3 (233-279)||(24396291-24396337)
chr3 (233-279)||(25850051-25850097)
chr3 (232-278)||(33076689-33076734)
chr3 (233-267)||(44907174-44907208)
chr3 (233-267)||(50611193-50611227)
chr3 (233-286)||(14859738-14859791)
chr3 (232-277)||(51202038-51202083)
chr3 (233-286)||(53508476-53508529)
chr3 (232-264)||(17238073-17238105)
chr3 (242-278)||(36623931-36623967)
chr3 (235-279)||(38440368-38440412)
chr3 (233-281)||(41818474-41818522)
chr3 (293-337)||(42460933-42460977)
chr3 (233-269)||(46178831-46178867)
chr3 (233-281)||(50194128-50194176)
[»] chr8 (51 HSPs)
chr8 (232-337)||(7883030-7883143)
chr8 (232-337)||(30568110-30568223)
chr8 (233-337)||(16928547-16928659)
chr8 (232-337)||(31013397-31013510)
chr8 (232-337)||(1236487-1236599)
chr8 (232-290)||(23230885-23230943)
chr8 (234-337)||(45445602-45445713)
chr8 (232-337)||(8412311-8412424)
chr8 (234-290)||(40211091-40211147)
chr8 (250-337)||(25190872-25190967)
chr8 (232-290)||(27498155-27498213)
chr8 (232-290)||(40618862-40618920)
chr8 (233-290)||(9637199-9637256)
chr8 (250-336)||(41684561-41684655)
chr8 (232-290)||(17693402-17693460)
chr8 (232-290)||(28086601-28086659)
chr8 (232-290)||(37971529-37971587)
chr8 (235-288)||(33214463-33214516)
chr8 (232-279)||(14906697-14906744)
chr8 (232-274)||(10377932-10377974)
chr8 (233-283)||(19443843-19443893)
chr8 (232-277)||(3240636-3240681)
chr8 (233-290)||(16247014-16247071)
chr8 (232-337)||(3673628-3673741)
chr8 (293-337)||(43833854-43833898)
chr8 (232-279)||(4809227-4809274)
chr8 (232-279)||(9072981-9073028)
chr8 (232-279)||(29777482-29777529)
chr8 (232-286)||(470936-470990)
chr8 (291-337)||(7198051-7198097)
chr8 (236-278)||(7579517-7579559)
chr8 (291-337)||(14585864-14585910)
chr8 (232-337)||(15344495-15344609)
chr8 (232-337)||(15433560-15433674)
chr8 (232-337)||(15524864-15524978)
chr8 (233-279)||(23851269-23851315)
chr8 (232-337)||(24099046-24099158)
chr8 (233-286)||(8868065-8868118)
chr8 (242-279)||(9799685-9799722)
chr8 (245-290)||(24186463-24186508)
chr8 (233-270)||(28240113-28240150)
chr8 (233-286)||(29939547-29939599)
chr8 (233-286)||(34610093-34610146)
chr8 (242-278)||(5457475-5457511)
chr8 (297-337)||(18890561-18890601)
chr8 (242-286)||(24842742-24842786)
chr8 (242-278)||(28296783-28296819)
chr8 (242-278)||(31712748-31712784)
chr8 (293-337)||(37971470-37971514)
chr8 (233-277)||(39152917-39152961)
chr8 (232-280)||(42046484-42046531)
[»] chr7 (50 HSPs)
chr7 (232-337)||(37837250-37837362)
chr7 (236-337)||(8001341-8001450)
chr7 (233-337)||(12141099-12141212)
chr7 (236-337)||(40993344-40993453)
chr7 (253-337)||(39171402-39171494)
chr7 (233-337)||(48061609-48061721)
chr7 (232-290)||(28044547-28044605)
chr7 (232-337)||(34899398-34899511)
chr7 (232-290)||(9977001-9977059)
chr7 (232-337)||(39328585-39328697)
chr7 (235-337)||(28407712-28407822)
chr7 (252-337)||(47590498-47590591)
chr7 (235-337)||(45349593-45349703)
chr7 (232-279)||(14627672-14627719)
chr7 (232-279)||(17611647-17611694)
chr7 (232-279)||(26492621-26492668)
chr7 (232-279)||(42066836-42066883)
chr7 (232-337)||(42978797-42978906)
chr7 (233-279)||(20083594-20083640)
chr7 (233-279)||(32684924-32684970)
chr7 (233-279)||(34773967-34774013)
chr7 (233-279)||(35261553-35261599)
chr7 (233-279)||(45198808-45198854)
chr7 (232-337)||(48316610-48316716)
chr7 (232-272)||(21266655-21266695)
chr7 (232-267)||(1448606-1448641)
chr7 (232-279)||(1485030-1485077)
chr7 (232-267)||(12502026-12502061)
chr7 (232-267)||(12527660-12527695)
chr7 (232-279)||(20116837-20116884)
chr7 (232-283)||(38880404-38880455)
chr7 (232-279)||(46822271-46822318)
chr7 (233-279)||(3267009-3267055)
chr7 (233-283)||(24069182-24069232)
chr7 (291-337)||(28476413-28476459)
chr7 (233-279)||(35495950-35495996)
chr7 (233-286)||(3876033-3876086)
chr7 (242-279)||(10574789-10574826)
chr7 (233-286)||(11344066-11344119)
chr7 (232-281)||(41553227-41553276)
chr7 (233-281)||(3222897-3222945)
chr7 (232-264)||(23425147-23425179)
chr7 (232-280)||(24610050-24610098)
chr7 (235-283)||(25286982-25287030)
chr7 (242-278)||(26017332-26017368)
chr7 (242-278)||(30992498-30992534)
chr7 (242-278)||(32312925-32312961)
chr7 (242-278)||(34893511-34893547)
chr7 (246-278)||(42603443-42603475)
chr7 (235-287)||(46700279-46700331)
[»] chr5 (41 HSPs)
chr5 (232-337)||(6011929-6012042)
chr5 (232-337)||(13007413-13007526)
chr5 (232-337)||(9113516-9113629)
chr5 (232-337)||(38007541-38007654)
chr5 (233-337)||(24229576-24229688)
chr5 (232-337)||(14726252-14726365)
chr5 (240-337)||(25980341-25980446)
chr5 (232-337)||(26825614-26825727)
chr5 (232-337)||(34945577-34945690)
chr5 (250-337)||(38597981-38598076)
chr5 (235-337)||(8096293-8096402)
chr5 (232-337)||(13422117-13422229)
chr5 (233-290)||(14082188-14082245)
chr5 (233-290)||(35851036-35851093)
chr5 (232-290)||(1409739-1409797)
chr5 (232-290)||(11073779-11073835)
chr5 (232-279)||(21060057-21060104)
chr5 (233-337)||(26877901-26878013)
chr5 (232-279)||(34881975-34882022)
chr5 (233-279)||(781646-781692)
chr5 (232-282)||(8088004-8088054)
chr5 (234-279)||(18677242-18677287)
chr5 (232-279)||(7242042-7242089)
chr5 (232-279)||(7247217-7247264)
chr5 (232-279)||(8984780-8984827)
chr5 (232-279)||(10649900-10649947)
chr5 (232-287)||(10723003-10723058)
chr5 (232-279)||(27752183-27752230)
chr5 (232-279)||(30371879-30371926)
chr5 (233-337)||(41184216-41184324)
chr5 (232-278)||(177754-177800)
chr5 (233-279)||(3271177-3271223)
chr5 (291-337)||(28540764-28540810)
chr5 (233-279)||(43008090-43008136)
chr5 (232-277)||(19280711-19280756)
chr5 (235-287)||(4771099-4771150)
chr5 (242-278)||(5378706-5378742)
chr5 (242-278)||(17218127-17218163)
chr5 (233-273)||(27576160-27576200)
chr5 (233-269)||(36057103-36057139)
chr5 (242-278)||(40775165-40775201)
[»] chr2 (73 HSPs)
chr2 (232-337)||(5427661-5427774)
chr2 (232-337)||(31788651-31788764)
chr2 (233-337)||(38445361-38445473)
chr2 (234-337)||(35220523-35220634)
chr2 (233-335)||(31193129-31193239)
chr2 (232-337)||(1415752-1415865)
chr2 (232-337)||(4778948-4779061)
chr2 (232-337)||(18763663-18763776)
chr2 (232-337)||(33585527-33585640)
chr2 (232-337)||(33923900-33924013)
chr2 (236-337)||(1421871-1421979)
chr2 (232-337)||(4041386-4041499)
chr2 (232-329)||(36942914-36943019)
chr2 (233-337)||(36692069-36692181)
chr2 (235-290)||(11985028-11985083)
chr2 (232-290)||(37876398-37876456)
chr2 (235-337)||(12677246-12677356)
chr2 (232-337)||(7646673-7646786)
chr2 (232-286)||(12553961-12554015)
chr2 (233-279)||(30923250-30923296)
chr2 (233-286)||(14416420-14416473)
chr2 (233-290)||(25508861-25508918)
chr2 (235-337)||(29173512-29173622)
chr2 (232-281)||(32448409-32448458)
chr2 (232-337)||(7677665-7677778)
chr2 (232-279)||(4193097-4193144)
chr2 (232-279)||(9374337-9374384)
chr2 (294-337)||(10929860-10929903)
chr2 (232-279)||(25087295-25087342)
chr2 (232-279)||(31580429-31580476)
chr2 (232-279)||(36234258-36234305)
chr2 (291-337)||(280993-281039)
chr2 (291-337)||(3309140-3309186)
chr2 (233-279)||(4228383-4228429)
chr2 (233-279)||(21570183-21570229)
chr2 (291-337)||(27097266-27097312)
chr2 (232-278)||(32913489-32913535)
chr2 (232-281)||(37994542-37994591)
chr2 (235-279)||(38575263-38575307)
chr2 (232-267)||(2808247-2808282)
chr2 (232-279)||(3725440-3725487)
chr2 (232-279)||(7015485-7015532)
chr2 (232-279)||(8806126-8806173)
chr2 (232-279)||(8971402-8971449)
chr2 (232-279)||(9986116-9986163)
chr2 (235-337)||(17248943-17249052)
chr2 (232-267)||(22422000-22422035)
chr2 (232-267)||(27248925-27248960)
chr2 (233-279)||(459051-459097)
chr2 (235-277)||(4100593-4100635)
chr2 (233-279)||(4903938-4903984)
chr2 (236-278)||(8308356-8308398)
chr2 (291-337)||(12554040-12554086)
chr2 (232-286)||(14955794-14955848)
chr2 (233-286)||(33759977-33760028)
chr2 (232-278)||(34600475-34600521)
chr2 (232-274)||(41328005-41328047)
chr2 (242-279)||(11550340-11550377)
chr2 (233-286)||(36175305-36175358)
chr2 (232-277)||(41431290-41431335)
chr2 (242-278)||(4878408-4878444)
chr2 (241-277)||(8809544-8809580)
chr2 (293-337)||(8971468-8971512)
chr2 (242-278)||(12366272-12366308)
chr2 (242-278)||(15920278-15920314)
chr2 (242-278)||(18141155-18141191)
chr2 (232-264)||(26025270-26025302)
chr2 (235-279)||(28037345-28037389)
chr2 (235-283)||(30399824-30399872)
chr2 (235-279)||(30420929-30420973)
chr2 (232-276)||(37613900-37613944)
chr2 (242-286)||(40125782-40125825)
chr2 (235-279)||(40625834-40625878)
[»] chr1 (68 HSPs)
chr1 (232-337)||(49504386-49504499)
chr1 (233-337)||(11462274-11462386)
chr1 (233-337)||(14872827-14872939)
chr1 (81-134)||(21695315-21695368)
chr1 (232-332)||(44915832-44915940)
chr1 (236-337)||(16989559-16989668)
chr1 (232-337)||(29738456-29738568)
chr1 (233-337)||(10776253-10776365)
chr1 (233-337)||(21687566-21687678)
chr1 (232-291)||(26535578-26535637)
chr1 (235-337)||(51373652-51373762)
chr1 (241-337)||(35484191-35484295)
chr1 (232-279)||(41081478-41081525)
chr1 (232-290)||(7337454-7337512)
chr1 (233-287)||(36894200-36894254)
chr1 (233-290)||(4413357-4413414)
chr1 (232-289)||(32395241-32395298)
chr1 (232-337)||(34878069-34878182)
chr1 (235-281)||(24583201-24583247)
chr1 (235-281)||(24583397-24583443)
chr1 (232-337)||(5984024-5984117)
chr1 (236-337)||(21947413-21947522)
chr1 (293-337)||(35461914-35461958)
chr1 (232-337)||(39888370-39888483)
chr1 (235-290)||(940481-940536)
chr1 (232-279)||(27456743-27456790)
chr1 (232-279)||(30879335-30879382)
chr1 (232-279)||(48217697-48217744)
chr1 (232-290)||(8211098-8211156)
chr1 (236-290)||(23289187-23289241)
chr1 (233-279)||(35584398-35584444)
chr1 (232-337)||(44543460-44543571)
chr1 (250-336)||(1742476-1742570)
chr1 (232-277)||(20266564-20266609)
chr1 (233-337)||(27579920-27580032)
chr1 (232-281)||(47133154-47133203)
chr1 (233-277)||(44637679-44637723)
chr1 (232-337)||(45415746-45415859)
chr1 (232-337)||(50377511-50377624)
chr1 (232-267)||(9686979-9687014)
chr1 (232-267)||(34519400-34519435)
chr1 (232-279)||(51868419-51868466)
chr1 (233-279)||(7342982-7343028)
chr1 (291-337)||(14489460-14489506)
chr1 (232-290)||(15431458-15431515)
chr1 (233-283)||(19596252-19596302)
chr1 (291-337)||(19715733-19715779)
chr1 (291-337)||(19723510-19723556)
chr1 (291-337)||(31317924-31317970)
chr1 (291-337)||(37720007-37720053)
chr1 (291-337)||(48750373-48750419)
chr1 (232-265)||(27914881-27914914)
chr1 (232-265)||(30712083-30712116)
chr1 (233-278)||(33486687-33486732)
chr1 (232-265)||(33816942-33816975)
chr1 (232-265)||(33876412-33876445)
chr1 (242-279)||(38646987-38647024)
chr1 (235-279)||(3871667-3871711)
chr1 (242-278)||(8893696-8893732)
chr1 (235-279)||(11709484-11709528)
chr1 (242-278)||(12967407-12967443)
chr1 (235-267)||(18569088-18569120)
chr1 (242-278)||(26771510-26771546)
chr1 (242-278)||(34659315-34659351)
chr1 (235-279)||(45805606-45805650)
chr1 (250-286)||(45841198-45841234)
chr1 (242-278)||(46589552-46589588)
chr1 (242-278)||(49652239-49652275)
[»] scaffold0026 (1 HSPs)
scaffold0026 (232-337)||(71661-71774)
[»] scaffold0136 (1 HSPs)
scaffold0136 (233-337)||(9834-9946)
[»] scaffold0884 (1 HSPs)
scaffold0884 (233-337)||(1765-1877)
[»] scaffold0127 (1 HSPs)
scaffold0127 (232-337)||(15677-15790)
[»] scaffold0014 (1 HSPs)
scaffold0014 (233-279)||(201148-201194)
[»] scaffold0121 (1 HSPs)
scaffold0121 (233-290)||(31066-31123)
[»] scaffold0445 (2 HSPs)
scaffold0445 (261-337)||(1529-1613)
scaffold0445 (232-273)||(1629-1670)
[»] scaffold0219 (1 HSPs)
scaffold0219 (233-337)||(14664-14775)
[»] scaffold0603 (2 HSPs)
scaffold0603 (232-286)||(7971-8025)
scaffold0603 (296-337)||(7900-7941)
[»] scaffold0088 (1 HSPs)
scaffold0088 (293-337)||(50961-51005)
[»] scaffold0017 (1 HSPs)
scaffold0017 (256-337)||(32562-32651)
[»] scaffold0157 (1 HSPs)
scaffold0157 (232-279)||(26827-26874)
[»] scaffold0039 (2 HSPs)
scaffold0039 (232-279)||(53192-53239)
scaffold0039 (234-283)||(93364-93413)
[»] scaffold0311 (1 HSPs)
scaffold0311 (237-279)||(8947-8989)
[»] scaffold0022 (1 HSPs)
scaffold0022 (233-279)||(83212-83258)
[»] scaffold0021 (1 HSPs)
scaffold0021 (232-286)||(4401-4455)
[»] scaffold0146 (1 HSPs)
scaffold0146 (232-264)||(16094-16126)
[»] scaffold0009 (1 HSPs)
scaffold0009 (233-281)||(57881-57929)


Alignment Details
Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 606503 - 606390
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || ||||||||||    
T  606503 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacag 606404  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  606403 cacccaagttaata 606390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 32327011 - 32327124
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| || ||||||||||    
T  32327011 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacag 32327110  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  32327111 cacccaagttaata 32327124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 12170766 - 12170654
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        | ||||||||||||||||| |  |||||||||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaatgtaaagggtgaatatgcgagcaaactcacagc 12170667  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  12170666 acccaagttaata 12170654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 21426480 - 21426590
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    |||||||| | ||| |||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| || |||||||||||||    
T  21426480 aaaaacaacacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaacggtgaatatgcgaacaaactcacagcac 21426579  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  21426580 ccaagttaata 21426590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 9341442 - 9341555
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || |||||||||     
T  9341442 gacaaaaacaaaacgatactcattcattcaaatcgatagagtacatcagatacaaacattgctaaaaacgtaaagggtgaatctgcgaacaaactcacaa 9341541  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  9341542 cacccaagttaata 9341555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 33052959 - 33053072
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||        ||||||||||||||||||| || ||||||||||    
T  33052959 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacattgctaaaaacgtaaagggtgaatatgcgaacaaactcacag 33053058  T
Q  324 cacccaagttaata 337  Q
    || |||||||||||    
T  33053059 catccaagttaata 33053072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 67792 - 67905
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| | | ||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||| ||| || ||||||||||    
T  67792 gacaaaaataaaacggtattcattcattcaaatcgatagagtatatcagatacaaacattgctaaaaacgtaaagggtgaatctgcgaacaaactcacag 67891  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  67892 cacccaagttaata 67905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 3913365 - 3913478
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||| || ||| || |||||||||     
T  3913365 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgcatctgcgaacaaactcacaa 3913464  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  3913465 cacccaagttaata 3913478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 7514994 - 7515106
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa-------acatacgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||       | | ||||||||||||||| ||| || ||||||||||     
T  7514994 gacaaaaacaaaacgatattcattcattcaaatcgatagagtgcatcagatataaaatcgctaaaaacgtaaagggtgaatttgcgaacaaactcacaga 7515093  T
Q  325 acccaagttaata 337  Q
    | |||||||||||    
T  7515094 aaccaagttaata 7515106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 14174862 - 14174920
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  14174862 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaaacat 14174920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 14179398 - 14179456
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  14179398 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaaacat 14179456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 337
Target Start/End: Complemental strand, 23128899 - 23128804
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| || ||||||||||||||||||||||        | ||||||||||||| ||| || ||||||||||||||||| ||||||    
T  23128899 ttcattcattcaaatagacagagtacatcagatacaaacatcgctaaaaatgtaaagggtgaatctgcgaacaaactcacagcacccaaattaata 23128804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 29319668 - 29319726
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||||||| |||||||||||||||  ||| |||| |||||||||||||||    
T  29319668 gacaaaaacaaaatgatattcattcattcaaattaataaagtatatcagatacaaacat 29319726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 30894894 - 30894789
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    ||||| |||| ||| ||||||||||||||||||| || ||||||||||||||||||        ||||||||| ||||| ||| |||||||||||||||     
T  30894894 aaaaataaaacgatattcattcattcaaatcgatggaatacatcagatacaaacatcgctaaaaacgtaaaggatgaatctgc-aataaactcacagcat 30894796  T
Q  327 ccaagtt 333  Q
    |||||||    
T  30894795 ccaagtt 30894789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 8497271 - 8497224
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  8497271 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 8497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 23947091 - 23947138
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  23947091 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 23947138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 8102958 - 8102912
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  8102958 acgtaaaaggtgaatctgcaaacaaactcacagcacccaagttaata 8102912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 30608324 - 30608419
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||||||||| |||||||||||||||        ||||||||| ||||| |||||| || |||||| || |||||||||||    
T  30608324 ttcattcattcaaattgatagagtaaatcagatacaaacatcgttaaaaacgtaaaggatgaatttgcaaacaatctcacaacatccaagttaata 30608419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 31851672 - 31851722
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 282  Q
    |||||||||||||| || ||||||||||||||| |||||| ||||||||||    
T  31851672 gacaaaaacaaaataatattcattcattcaaattgatagaatacatcagat 31851722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 33110850 - 33110804
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||    
T  33110850 acgtaaaggatgaatatgcaaataaactcacaacatccaagttaata 33110804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 34185486 - 34185535
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 282  Q
    ||||||| |||||||| ||||||||||||||| ||||||||| |||||||    
T  34185486 acaaaaataaaatgatattcattcattcaaattgatagagtatatcagat 34185535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 679416 - 679364
Alignment:
Q  234 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||||||||| | || |||||||||||| |||||| ||||||||||||||    
T  679416 caaaaacaaaatgttatttattcattcaaattgatagaatacatcagatacaa 679364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 7880879 - 7880923
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||    
T  7880879 aaaaacaaaatgatattcattcattcaaatcgagagattacatca 7880923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 31297117 - 31297069
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    |||||||||||| ||| ||||||||||||||| |||||| |||||||||    
T  31297117 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 31297069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 32060175 - 32060119
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaac 288  Q
    |||||||| |||| ||| ||||||||||||||| |||| | ||||||||||||||||    
T  32060175 gacaaaaataaaacgatattcattcattcaaattgatatattacatcagatacaaac 32060119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 4984341 - 4984388
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  4984341 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 4984388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 7028158 - 7028123
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7028158 gacaaaaacaaaatgatattcattcattcaaatcga 7028123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 12653247 - 12653200
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||| ||||||| ||| |||||||    
T  12653247 gacaaaaacaaaatgatattcattcatttaaatcgagagattacatca 12653200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 17237060 - 17237107
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||| ||||||||||| |||||||||||||||||| ||| |||||||    
T  17237060 gacaacaacaaaatgatattcattcattcaaatcgagagattacatca 17237107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 25064539 - 25064492
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  25064539 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 25064492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 28634887 - 28634934
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||| |||| |||||||||||||||||||||  |||||||    
T  28634887 gacaaaaacaaactgatattcattcattcaaatcgataggttacatca 28634934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 34018856 - 34018801
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||| ||| |||||||||| |||| ||||||||| || ||||||||||||    
T  34018856 aaaaacaaaacgatattcattcatttaaattgatagagtatattagatacaaacat 34018801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 30776895 - 30776849
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||||||    
T  30776895 acgtaaagggtgaatctgcgaacaaactcacaacacccaagttaata 30776849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 32802778 - 32802732
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||||||| |  ||||||||||||||||| ||||||    
T  32802778 acgtaaagggtgaatatgcgatcaaactcacagcacccaatttaata 32802732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 34489501 - 34489459
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    |||||||||||||| || ||||||||||||||||||| |||||    
T  34489501 aaaaacaaaatgatatttattcattcaaatcgatagattacat 34489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 8027892 - 8027937
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    |||| |||||||||||| |||||||||||||||||| ||| |||||    
T  8027892 gacagaaacaaaatgatattcattcattcaaatcgagagattacat 8027937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 1450528 - 1450564
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgata 269  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  1450528 acaaaaataaaatgatattcattcattcaaatcgata 1450564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 7875821 - 7875865
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||| |||||||||| ||||||| ||| |||||||    
T  7875821 aaaaacaaaatgatattcattcatttaaatcgagagattacatca 7875865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 11321338 - 11321382
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||| ||| || |||||||||||| ||||||||||||||    
T  11321338 aaaaacaaaacgatatttattcattcaaattgatagagtacatca 11321382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 29744516 - 29744480
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  29744516 ttcattcattcaaattgatagaatacatcagatacaa 29744480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 21686033 - 21686146
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| || ||||||||||    
T  21686033 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctacaaacgtaaagggtgaatatgcgaacaaactcacag 21686132  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  21686133 cacccaagttaata 21686146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 19853303 - 19853416
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || |||||||||     
T  19853303 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaa 19853402  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  19853403 cacccaagttaata 19853416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 13634433 - 13634320
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||         |||||||||||||| | | || ||| ||||||    
T  13634433 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaagcgtaaagggtgaatctccgaacaaattcacag 13634334  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  13634333 cacccaagttaata 13634320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 2521096 - 2520984
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||        ||||||||||||||| ||| || ||||||||| |    
T  2521096 acaaaaacaaaacgatattcattcattcaaatcgatagagtccatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaac 2520997  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  2520996 acccaagttaata 2520984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 56040438 - 56040550
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| |  |||||||||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgagcaaactcacagc 56040537  T
Q  325 acccaagttaata 337  Q
    | |||||||||||    
T  56040538 atccaagttaata 56040550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 32766832 - 32766719
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||| ||  || ||||||||||    
T  32766832 gacaaaaacaaaacaatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgcaaagggtgaatctgagaacaaactcacag 32766733  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  32766732 cacccaagttaata 32766719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 26633463 - 26633520
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 26633520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 235 - 336
Target Start/End: Complemental strand, 43510511 - 43510402
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    |||||||||| ||| |||||||||||||||||||| ||||||||| ||||||| ||        ||||||||||||||| ||| || |||||||||||||    
T  43510511 aaaaacaaaacgatattcattcattcaaatcgataaagtacatcaaatacaaatatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcac 43510412  T
Q  327 ccaagttaat 336  Q
    ||||||||||    
T  43510411 ccaagttaat 43510402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 4142555 - 4142613
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  4142555 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacat 4142613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 17949114 - 17949228
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat---------acgtaaagggtgaatatgcaaataaactcaca 322  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||         | ||||||||||||| ||| || |||||||||    
T  17949114 gacagaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacatcgctaaaaaatgtaaagggtgaatctgcgaacaaactcaca 17949213  T
Q  323 gcacccaagttaata 337  Q
     ||||||||||||||    
T  17949214 acacccaagttaata 17949228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 17952966 - 17953080
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat---------acgtaaagggtgaatatgcaaataaactcaca 322  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||         | ||||||||||||| ||| || |||||||||    
T  17952966 gacagaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacatcgctaaaaaatgtaaagggtgaatctgcgaacaaactcaca 17953065  T
Q  323 gcacccaagttaata 337  Q
     ||||||||||||||    
T  17953066 acacccaagttaata 17953080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 10258692 - 10258750
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||    
T  10258692 gacaaaaacaaagtgagattcattcattcaaattgatagagtacatcagatacaaacat 10258750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 35348626 - 35348512
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgata--gagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcaca 322  Q
    |||| ||||||| ||| ||||||||  ||||||||||  |||||||||||||||||||||        ||||||||||||||| |||||| |||||||||    
T  35348626 acaataacaaaacgatattcattcaaccaaatcgataaagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcaca 35348527  T
Q  323 gcacccaagttaata 337  Q
     ||||||||||||||    
T  35348526 acacccaagttaata 35348512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 48257441 - 48257536
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || |||||||||  | |||||||||||    
T  48257441 ttcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaaaatccaagttaata 48257536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 22611507 - 22611450
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||    
T  22611507 acaaaaacaaaacgatatttattcatttaaatcgatagagtacatcagatacaaacat 22611450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 52097690 - 52097800
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca---gatacaa--acatacgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    ||||||||||||| ||| |||||||||||||||| | |||||||||||   |||||    | | ||||||||||||||||||| |||||||||||| ||     
T  52097690 gacaaaaacaaaacgatattcattcattcaaatcaacagagtacatcattcgataccgctaaaaacgtaaagggtgaatatgcgaataaactcacaacat 52097789  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  52097790 ccaagttaata 52097800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 24098878 - 24098918
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24098878 ttcattcattcaaatcgatagagtacatcagatacaaacat 24098918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 6155000 - 6155054
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||||    
T  6155000 gacaaaaacaaaatgatattcattcattcaaattgatagaatacattagatacaa 6155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 47320204 - 47320316
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa-------acatacgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||||  |||       | | ||||||||  ||||| ||| || |||||||||||    
T  47320204 gacaaaaacaaaattatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaacgtaaagaatgaatctgcgaacaaactcacagc 47320303  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  47320304 acccaagttaata 47320316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 53444437 - 53444323
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatac-aaacat--------acgtaaagggtgaatatgcaaataaactcaca 322  Q
    |||||||||||||| || ||||||||||||||| |||||| ||||| |||||| ||||||        ||||||| ||||||| | | || |||||||||    
T  53444437 gacaaaaacaaaataatattcattcattcaaatagatagattacattagatacaaaacatcgctaaaaacgtaaaaggtgaatctacgaacaaactcaca 53444338  T
Q  323 gcacccaagttaata 337  Q
    |||||||||||||||    
T  53444337 gcacccaagttaata 53444323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 2115362 - 2115409
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  2115362 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 2115409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 9284226 - 9284179
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  9284226 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 9284179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 9528651 - 9528698
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  9528651 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 9528698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 20569572 - 20569525
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  20569572 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 20569525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 25274198 - 25274151
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  25274198 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 25274151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 32952540 - 32952579
Alignment:
Q  240 caaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  32952540 caaaatgatattcattcattcaaatcgatagagtacatca 32952579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 46990909 - 46990952
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||| |||||||| ||||||||||||||||||||||||||||||    
T  46990909 aaaaaaaaatgatattcattcattcaaatcgatagagtacatca 46990952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 36162040 - 36161986
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||| |||||||| ||||||||||||||| |||||| ||||||| ||||||    
T  36162040 gacaaaaataaaatgatattcattcattcaaattgatagaatacatcaaatacaa 36161986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 44596977 - 44596919
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||||  || |||||| |||||||| |||||||||||||| ||||||||||    
T  44596977 gacaaaaacaaaacaatattcattaattcaaattgatagagtacatcaaatacaaacat 44596919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 53616425 - 53616471
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  53616425 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 53616471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 40065986 - 40066039
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||||||||  || ||||||||||||||||||||||| | |||||||||||    
T  40065986 acaaaaacaaaacaatattcattcattcaaatcgatagagaagatcagatacaa 40066039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 53811336 - 53811291
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||    
T  53811336 gacaaaaacaaaacgatattcattcatttaaatcgatagagtacat 53811291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 43853770 - 43853718
Alignment:
Q  234 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||| |||| ||| ||||||||||||||| |||||| ||||||||||||||    
T  43853770 caaaaataaaacgatattcattcattcaaattgatagaatacatcagatacaa 43853718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 329
Target Start/End: Original strand, 56156440 - 56156538
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgataga-gtacatcagata--caaacatacgtaaagggtgaatatgcaaataaactcacagcaccca 329  Q
    |||||||||||| ||| ||||||||||||||| |||||| ||||||||||||  | || | ||||||| ||||||| ||| || ||||||||| ||||||    
T  56156440 acaaaaacaaaacgatattcattcattcaaattgatagaggtacatcagatatgctaa-aaacgtaaaaggtgaatctgcgaacaaactcacaacaccca 56156538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 3335938 - 3335985
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||  || |||||||||||||||| |||||||||||||    
T  3335938 gacaaaaacaaaacaatattcattcattcaaatcaatagagtacatca 3335985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 4644173 - 4644126
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  4644173 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 4644126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 10359323 - 10359370
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| ||||||||| |||||||| ||| |||||||    
T  10359323 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatca 10359370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 12265776 - 12265729
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||| |||| |||||||||||||||||||||  |||||||    
T  12265776 gacaaaaacaaactgatattcattcattcaaatcgataggttacatca 12265729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 12493650 - 12493603
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||| |||| ||||||||||||||    
T  12493650 gacaaaaataaaatgatattcattcattaaaattgatagagtacatca 12493603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 38706484 - 38706531
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||| || |||||||||||||||||| ||| |||||||    
T  38706484 gacaaaaacaaaatcatattcattcattcaaatcgagagattacatca 38706531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 8670796 - 8670750
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||| |||| ||| |||||||||||||||||||||| |||||||    
T  8670796 acaaaaataaaacgatattcattcattcaaatcgatagattacatca 8670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 22611434 - 22611388
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||| || ||||||||||||||||| ||||||    
T  22611434 acgtaaagggtgaatctgcgaacaaactcacagcacccaatttaata 22611388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 21662754 - 21662697
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||| ||||| ||| || |||||||||||  |||||||||||||| ||||||||||    
T  21662754 acaaaatcaaaacgatatttattcattcaaagtgatagagtacatcaaatacaaacat 21662697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 21671518 - 21671461
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||| ||||| ||| || |||||||||||  |||||||||||||| ||||||||||    
T  21671518 acaaaatcaaaacgatatttattcattcaaagtgatagagtacatcaaatacaaacat 21671461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 37465801 - 37465748
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||| |||||| ||| |||||||||| |||| |||||| ||||||||||||||    
T  37465801 acaaagacaaaacgatattcattcatttaaattgatagaatacatcagatacaa 37465748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 52979061 - 52979004
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||| ||| ||| ||||||||||| |||  ||||||||||||| ||||||    
T  52979061 acaaaaacaaaacgatattctttcattcaaattgatctagtacatcagatataaacat 52979004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 10389528 - 10389572
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtaca 276  Q
    |||||||| |||||||| |||||||||||||||||| ||| ||||    
T  10389528 gacaaaaataaaatgatattcattcattcaaatcgagagattaca 10389572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 18936027 - 18935987
Alignment:
Q  297 agggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||| |||||| ||||||||| ||||||||||||||    
T  18936027 agggtgaatctgcaaacaaactcacaacacccaagttaata 18935987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 24100594 - 24100558
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  24100594 aaatgatattcattcattcaaattgatagagtacatc 24100558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 34024212 - 34024256
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtaca 276  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||    
T  34024212 gacaaaagcaaaatgatattcattcattcaaatcgagagattaca 34024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 38943817 - 38943853
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  38943817 aaatgatattcattcattcaaattgatagagtacatc 38943853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 44374949 - 44374985
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  44374949 aaatgatattcattcattcaaattgatagagtacatc 44374985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 45227818 - 45227862
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  45227818 aaaaaaaaaatgatattcattcattcaaatcgagagattacatca 45227862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 56236491 - 56236527
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  56236491 aaatgatattcattcattcaaattgatagagtacatc 56236527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 6954487 - 6954600
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||| |||||| ||||||||||    
T  6954487 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacttcagatacaaacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacag 6954586  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  6954587 cacccaagttaata 6954600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 9797325 - 9797438
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||| |||| ||||||||||    
T  9797325 gacaaaaacaaaacgatattcattcattcaaatcgatatagtacatcagatacaaacatcgctaagaacgtaaagggtgaatatacaaacaaactcacag 9797424  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  9797425 cacccaagttaata 9797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 45568239 - 45568349
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| |||||||||||| |||    
T  45568239 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaataaactcacatcac 45568338  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  45568339 ccaagttaata 45568349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 21533600 - 21533713
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||| ||| ||| ||| || ||||||||||    
T  21533600 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaaggtaaatctgcgaacaaactcacag 21533699  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  21533700 cacccaagttaata 21533713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 43017185 - 43017072
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||||  ||||||||||||     
T  43017185 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaggatgaatatgtgaataaactcacaa 43017086  T
Q  324 cacccaagttaata 337  Q
    |||| |||||||||    
T  43017085 cacctaagttaata 43017072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 44959767 - 44959877
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||||||||||||    
T  44959767 acaaaaacaaaattat--tcattcattcaaatcgatagaatacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcaaataaactcacagc 44959864  T
Q  325 acccaagttaata 337  Q
    | |||||||||||    
T  44959865 atccaagttaata 44959877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 52922908 - 52923021
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||| ||| || ||||||||||    
T  52922908 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacag 52923007  T
Q  324 cacccaagttaata 337  Q
    || |||||||||||    
T  52923008 cagccaagttaata 52923021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 48650527 - 48650638
Alignment:
Q  234 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagca 325  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||        | ||||||||||||| ||| || ||||||||| ||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaatatcgctaaaaatgtaaagggtgaatctgcgaacaaactcacaaca 48650626  T
Q  326 cccaagttaata 337  Q
    ||||||||||||    
T  48650627 cccaagttaata 48650638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 46304313 - 46304424
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat-------acgtaaagggtgaatatgcaaataaactcacagca 325  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||| ||| || ||||||||| ||    
T  46304313 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaaacatgctaaaaacgtaaagggtgaatctgcgaacaaactcacaaca 46304412  T
Q  326 cccaagttaata 337  Q
    | ||||||||||    
T  46304413 ctcaagttaata 46304424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 10108533 - 10108420
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||| | | || ||||||||||    
T  10108533 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagctaaaaacgtaaagggtgaatctacgaacaaactcacag 10108434  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  10108433 cacccaagttaata 10108420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 9998763 - 9998651
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||| | | || |||||||||||    
T  9998763 acaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagctaaaaacgtaaagggtgaatctacgaacaaactcacagc 9998664  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  9998663 acccaagttaata 9998651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 10229773 - 10229660
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| ||| ||||||||||||||||||||||||| |||| ||||||||||        ||||||||||||||| | | || ||||||||||    
T  10229773 gacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaaacatagctaaaaacgtaaagggtgaatctacgaacaaactcacag 10229674  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  10229673 cacccaagttaata 10229660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 10233367 - 10233254
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||        || |||||||||||| | | || ||||||||||    
T  10233367 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagataaaaacataaagggtgaatgtacgaacaaactcacag 10233268  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  10233267 cacccaagttaata 10233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 40487621 - 40487509
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||        || ||||| |||||| ||| || ||||||||| |    
T  40487621 acaaaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacatcgctaaaaacataaagagtgaatttgcgaacaaactcacaac 40487522  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  40487521 acccaagttaata 40487509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 43488386 - 43488494
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat-------acgtaaagggtgaatatgcaaataaactcacagcaccc 328  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||       ||||||| | ||||| ||| || |||||||||||||||    
T  43488386 aaaacaaaacgatattcattcattcaaatcgatagagtacattagatacaaacatcgctaaaacgtaaatgatgaatctgcgaacaaactcacagcaccc 43488485  T
Q  329 aagttaata 337  Q
    || ||||||    
T  43488486 aaattaata 43488494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 47041839 - 47041897
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  47041839 gacaaaaacaaaatgatattcattcattcaaatagatagattacatcagatacaaacat 47041897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 4711779 - 4711666
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| ||| ||||||||  |||||||||||||||||||||||||||||||        || |||||| ||||| |||||| |||||||||     
T  4711779 gacaaaaataaaacgatattcattcaaccaaatcgatagagtacatcagatacaaacatcactaaaaacataaaggatgaatctgcaaacaaactcacaa 4711680  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  4711679 cacccaagttaata 4711666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 33580177 - 33580064
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||| ||||||||||        ||||||||||||||| ||| || ||| |||||     
T  33580177 gacaaaaacaagacgatattcattcattcaaatcgatagattacatcaaatacaaacatcactaaaaacgtaaagggtgaatctgcgaacaaaatcacaa 33580078  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  33580077 cacccaagttaata 33580064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 20464756 - 20464806
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 282  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20464756 gacaaaaacaaaatgatattcattcattcaaattgatagagtacatcagat 20464806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 36910557 - 36910615
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  36910557 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcagatataaacat 36910615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 21431912 - 21431855
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaaca 289  Q
    |||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  21431912 gacaaaaataaaacgacattcattcattcaaatcgatagagtacatcagatacaaaca 21431855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 37041062 - 37040952
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    |||||||||| ||| |||||||||||| || |||||||||||||||||||||| ||        ||||||||||| ||  ||| || |||||||||||||    
T  37041062 aaaaacaaaacgatattcattcattcagattgatagagtacatcagatacaaaaatcgctagaaacgtaaagggtaaaactgcgaacaaactcacagcac 37040963  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  37040962 ccaagttaata 37040952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 54149287 - 54149230
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||  ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  54149287 acaaaaattaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 54149230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 21313333 - 21313220
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaac--------atacgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||        | | ||||||||||||| | | || ||||||||||    
T  21313333 gacaaaaacaaaacgatattcattcattcaaattgattgagtatatcagatacaaacaccgctaaaaatgtaaagggtgaatctccgaacaaactcacag 21313234  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  21313233 cacccaagttaata 21313220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 38546096 - 38545983
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| || ||||||||||||||||||| ||| ||||||||||||||        ||||||||||||||| ||  || |||||| ||     
T  38546096 gacaaaaacaaaacgatatttattcattcaaatcgatagattacctcagatacaaacatcactaaaaacgtaaagggtgaatctgggaacaaactcccac 38545997  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  38545996 cacccaagttaata 38545983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 332
Target Start/End: Complemental strand, 40556998 - 40556891
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||| | ||||||||| ||||||||||        || |||||||||||| ||| || ||||||||| |    
T  40556998 acaaaaacaaaacgatattcattcattcaaatcgacatagtacatcaaatacaaacatcgctaaaaacataaagggtgaatctgcgaacaaactcacaac 40556899  T
Q  325 acccaagt 332  Q
    ||||||||    
T  40556898 acccaagt 40556891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 38859943 - 38859980
Alignment:
Q  253 attcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38859943 attcattcaaatcgatagagtacatcagatacaaacat 38859980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 628715 - 628762
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  628715 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatca 628762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 3085085 - 3085136
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||||||||| ||||||||||||||| |||||| ||| ||||||||||    
T  3085085 aaaaacaaaatgatattcattcattcaaattgatagaatacttcagatacaa 3085136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 4178865 - 4178818
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  4178865 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 4178818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 23799740 - 23799794
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaac 288  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||    
T  23799740 acaaaaacaaaacgatattcattcattcaaattgatagagtacat-agatacaaac 23799794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 25162736 - 25162689
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  25162736 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 25162689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 36461249 - 36461341
Alignment:
Q  253 attcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    |||||||||||| |||||||||||| ||||||||||||        | ||||||||||||| ||| || ||||||||||||| ||||||||||    
T  36461249 attcattcaaattgatagagtacattagatacaaacatcgctaaaaatgtaaagggtgaatctgctaacaaactcacagcactcaagttaata 36461341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 2342748 - 2342702
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  2342748 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 2342702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 32607768 - 32607722
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  32607768 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 32607722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 47896448 - 47896390
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||| | ||||||||||    
T  47896448 gacaaaaacaaaacgatattcattgattcaaattgatagagtacattaaatacaaacat 47896390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 53807650 - 53807762
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa-------acatacgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||||||||||||||| |||||||||| ||||| ||||| |||||||||  |||       | | ||||||||| ||||| ||| || ||||||||| |    
T  53807650 gacaaaaacaaaatgatattcattcattaaaatcaatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacacc 53807749  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  53807750 acccaagttaata 53807762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 7546840 - 7546799
Alignment:
Q  296 aagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  7546840 aagggtgaatctgcaaacaaactcacagcacccaagttaata 7546799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 29503760 - 29503716
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||    
T  29503760 acaaaaacaaaatgatattcattcattcaaatcaatagattacat 29503716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 38142753 - 38142709
Alignment:
Q  293 gtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||    
T  38142753 gtaaagggtgaatatgcaaacaaactcacagcattcaagttaata 38142709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 38854813 - 38854920
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatac--aaacatacgtaaagggtgaatatgcaaataaactcacagcaccca 329  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||| |||   ||    | | ||||||||| ||||||||| || ||||||||| || |||    
T  38854813 gacaaaaacaaaatgatattcattcattcaaatcgagagattacgtcattcaccgctaaaaacgtaaaggatgaatatgcgaaaaaactcacatcatcca 38854912  T
Q  330 agttaata 337  Q
    ||||||||    
T  38854913 agttaata 38854920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 12116398 - 12116351
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  12116398 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 12116351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 25631300 - 25631347
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  25631300 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 25631347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 36906422 - 36906375
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  36906422 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 36906375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 7448723 - 7448818
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||||||||||| |||||| ||||||        ||||||| ||||||| ||| || ||||||||| |||| |||||||||    
T  7448723 ttcattcattcaaattgatagagtacaacagatataaacatcgataaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaata 7448818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 7456865 - 7456960
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||||||||||| |||||| ||||||        ||||||| ||||||| ||| || ||||||||| |||| |||||||||    
T  7456865 ttcattcattcaaattgatagagtacaacagatataaacatcgataaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaata 7456960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 21289672 - 21289718
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||| ||||||||| ||| || ||||||||||||||||||||||||    
T  21289672 acgtatagggtgaatctgcgaacaaactcacagcacccaagttaata 21289718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 24396291 - 24396337
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||| ||| |||||| |||||||| ||||||||||||||    
T  24396291 acaaaaacaaaacgatattcattaattcaaattgatagagtacatca 24396337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 25850097 - 25850051
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||| ||| |||||||||||||||| ||| |||||||||    
T  25850097 acaaaaacaaaacgatattcattcattcaaatcaataaagtacatca 25850051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 33076734 - 33076689
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||    
T  33076734 gacaaaaacaaa-tgatattcattcattcaaattgatagagtacatc 33076689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 44907174 - 44907208
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    |||||||||||||||| ||||||||||||||||||    
T  44907174 acaaaaacaaaatgatattcattcattcaaatcga 44907208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 50611193 - 50611227
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    |||||||||||||||| ||||||||||||||||||    
T  50611193 acaaaaacaaaatgatattcattcattcaaatcga 50611227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 14859791 - 14859738
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||||| ||  || ||||||||||||||| |||||| ||||||||||||||    
T  14859791 acaaaaacagaacaatattcattcattcaaattgatagaatacatcagatacaa 14859738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 51202038 - 51202083
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||    
T  51202038 gacaaaaacaaaatgatatttattcattcaaatcgagagattacat 51202083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 53508529 - 53508476
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||| ||||||||| |||||||||| || | |||||| ||||||||||||||    
T  53508529 acaaaagcaaaatgatattcattcatttaatttgatagaatacatcagatacaa 53508476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 17238105 - 17238073
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaat 264  Q
    ||||||||||||||||| |||||||||||||||    
T  17238105 gacaaaaacaaaatgatattcattcattcaaat 17238073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 36623931 - 36623967
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  36623931 aaatgatattcattcattcaaattgatagagtacatc 36623967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 38440368 - 38440412
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  38440368 aaaaataaaatgatattcattcattcaaatcgaaagattacatca 38440412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 41818522 - 41818474
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    |||||| ||||| ||| ||||||||||||||| |||||| |||||||||    
T  41818522 acaaaagcaaaacgatattcattcattcaaattgatagaatacatcaga 41818474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 42460977 - 42460933
Alignment:
Q  293 gtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||    
T  42460977 gtaaagggtgaatctgcgaacaaactcacagtacccaagttaata 42460933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 46178867 - 46178831
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgata 269  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  46178867 acaaaaacaaaacgattttcattcattcaaatcgata 46178831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 50194128 - 50194176
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    |||||| ||||||||| ||||||||||||||| |||| | |||||||||    
T  50194128 acaaaagcaaaatgatattcattcattcaaattgatataatacatcaga 50194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 7883030 - 7883143
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||| ||| || ||||||||||    
T  7883030 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacag 7883129  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  7883130 cacccaagttaata 7883143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 30568110 - 30568223
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||        ||||||||||||||| ||| || |||||||||     
T  30568110 gacaaaaacaaaatgatattcattcattcaaattgatagattacatcatatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaa 30568209  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  30568210 cacccaagttaata 30568223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 16928547 - 16928659
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || ||||||||| |    
T  16928547 acaaagacagaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaac 16928646  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  16928647 acccaagttaata 16928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 31013397 - 31013510
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||        ||||||||||||||| ||| || |||||||||     
T  31013397 gacaaaaacaaaacgatagtcattcattcatatcgataaagtacatcagatacaaacattgctaaaaacgtaaagggtgaatctgcgaacaaactcacaa 31013496  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  31013497 cacccaagttaata 31013510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 1236487 - 1236599
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa-------acatacgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||  |||       | | ||||||||| ||||| ||| || |||||||||||    
T  1236487 gacaaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagattgctaaaaacgtaaaggatgaatctgcgaacaaactcacagc 1236586  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  1236587 acccaagttaata 1236599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 23230943 - 23230885
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  23230943 gacaaaagcaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 23230885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 45445602 - 45445713
Alignment:
Q  234 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagca 325  Q
    ||||||||||| ||| ||||||||||||||||||| || ||||||||||||||||||        ||||||| ||||||||||| || ||||||||| ||    
T  45445602 caaaaacaaaacgatattcattcattcaaatcgatggattacatcagatacaaacatcgttaaaaacgtaaaaggtgaatatgcgaacaaactcacaaca 45445701  T
Q  326 cccaagttaata 337  Q
     |||||||||||    
T  45445702 tccaagttaata 45445713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 8412311 - 8412424
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| ||| |||||||||||||||| ||||| || |||||||||||||||        || |||||||||||| |||||| |||||||||     
T  8412311 gacaaaaataaaacgatattcattcattcaaatcaatagattaaatcagatacaaacatcgctaaaaacataaagggtgaatctgcaaacaaactcacaa 8412410  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  8412411 cacccaagttaata 8412424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 40211091 - 40211147
Alignment:
Q  234 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  40211091 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatataaacat 40211147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 25190872 - 25190967
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    |||||||||||||||||||||| ||||||||||||||||||         |||||| ||||||| ||| || ||||||||||||||||||||||||    
T  25190872 ttcattcattcaaatcgatagattacatcagatacaaacattgctaaaatcgtaaaaggtgaatctgcgaacaaactcacagcacccaagttaata 25190967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 27498155 - 27498213
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  27498155 gacaaaaataaaataatattcattcattcaaattgatagagtacatcagatacaaacat 27498213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 40618862 - 40618920
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||    
T  40618862 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcagatacaaacat 40618920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 9637199 - 9637256
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||    
T  9637199 acaaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaaacat 9637256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 41684655 - 41684561
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaat 336  Q
    |||||||||| |||| |||||||||||||||||| ||||||        |||||||||||||||||||||| |||| |||||| |||||||||||    
T  41684655 ttcattcatttaaattgatagagtacatcagatataaacatcgctaaaaacgtaaagggtgaatatgcaaacaaacacacagctcccaagttaat 41684561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 17693402 - 17693460
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||| ||||||||||    
T  17693402 gacaaaaacaaaacgatattcattcactcaaattgatagagtacatcaaatacaaacat 17693460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 28086601 - 28086659
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||| |||||||| |||| ||||||||||||||||||||    
T  28086601 gacaaaaacaaaacgatattcatttattcaaattgatatagtacatcagatacaaacat 28086659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 37971587 - 37971529
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||| |||| ||| |||||||| ||||||| ||||||||||||||||||||||||    
T  37971587 gacaaaaataaaacgatattcattcactcaaatcaatagagtacatcagatacaaacat 37971529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 33214463 - 33214516
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaac 288  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||    
T  33214463 aaaaacaaaacgatattcattcattcaaatcgatagagtacattagatataaac 33214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 14906697 - 14906744
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  14906697 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 14906744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 10377974 - 10377932
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagta 274  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  10377974 gacaaaaacaaaacgatattcattcattcaaatcgatagagta 10377932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 19443843 - 19443893
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 283  Q
    ||||||| |||| ||| ||||||||||||||| ||||||||||||||||||    
T  19443843 acaaaaataaaacgatattcattcattcaaattgatagagtacatcagata 19443893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 3240681 - 3240636
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||    
T  3240681 gacaaaaacaaaacgatgttcattcattcaaattgatagaatacat 3240636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 16247014 - 16247071
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||| |||||||| |||||| |||||||| ||| || ||||||||||||||||||    
T  16247014 acaaaaataaaatgatattcatttattcaaattgatggaatacatcagatacaaacat 16247071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 3673741 - 3673628
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| ||||||||||||||| |||| | ||||  ||||| |||||         ||||||||||||||  |||||| ||||||||||    
T  3673741 gacaaaaacaaaacgatattcattcattcaaattgatataatacactagatataaacaacgctaaaaacgtaaagggtgaaactgcaaacaaactcacag 3673642  T
Q  324 cacccaagttaata 337  Q
    || |||||||||||    
T  3673641 catccaagttaata 3673628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 43833854 - 43833898
Alignment:
Q  293 gtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||    
T  43833854 gtaaatggtgaatctgcaaacaaactcacagcacccaagttaata 43833898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 4809274 - 4809227
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  4809274 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 4809227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 9073028 - 9072981
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  9073028 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 9072981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 29777529 - 29777482
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  29777529 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 29777482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 470936 - 470990
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||||||||  || |||||||||| |||| |||||| ||||||||||||||    
T  470936 gacaaaaacaaaacaatattcattcatttaaattgatagaatacatcagatacaa 470990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 7198051 - 7198097
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||| |||||||||||| ||||||| ||||||    
T  7198051 acgtaaagggtgaatctgcgaataaactcacaacacccaaattaata 7198097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 7579517 - 7579559
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||    
T  7579517 aaaactaaatgatattcattcattcaaattgatagagtacatc 7579559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 14585910 - 14585864
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||| ||||||||| ||| || ||||||||||||||||||||||||    
T  14585910 acgtatagggtgaatctgcgaacaaactcacagcacccaagttaata 14585864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 15344609 - 15344495
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa---------acatacgtaaagggtgaatatgcaaataaactcaca 322  Q
    |||||||| |||||||| || |||||||||||| |||||| |||||||||  |||         | | ||||||||| ||||| ||| || |||||||||    
T  15344609 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 15344510  T
Q  323 gcacccaagttaata 337  Q
    |||||||||||||||    
T  15344509 gcacccaagttaata 15344495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 15433674 - 15433560
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa---------acatacgtaaagggtgaatatgcaaataaactcaca 322  Q
    |||||||| |||||||| || |||||||||||| |||||| |||||||||  |||         | | ||||||||| ||||| ||| || |||||||||    
T  15433674 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 15433575  T
Q  323 gcacccaagttaata 337  Q
    |||||||||||||||    
T  15433574 gcacccaagttaata 15433560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 15524978 - 15524864
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa---------acatacgtaaagggtgaatatgcaaataaactcaca 322  Q
    |||||||| |||||||| || |||||||||||| |||||| |||||||||  |||         | | ||||||||| ||||| ||| || |||||||||    
T  15524978 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 15524879  T
Q  323 gcacccaagttaata 337  Q
    |||||||||||||||    
T  15524878 gcacccaagttaata 15524864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 23851269 - 23851315
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||    
T  23851269 acaaaaacaaaatgataatcattcattcaaatcgagagattacatca 23851315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 24099046 - 24099158
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa-------acatacgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||||||||||| ||| ||||||||||||||| || ||| |||||||||  |||       | | ||||||||||||||| ||| || ||||||||| |    
T  24099046 gacaaaaacaaaacgatattcattcattcaaattgacagaatacatcagaatcaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaac 24099145  T
Q  325 acccaagttaata 337  Q
    | |||||||||||    
T  24099146 atccaagttaata 24099158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 8868118 - 8868065
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||| ||||| ||  ||||||||||||||| |||||| ||||||||||||||    
T  8868118 acaaaagcaaaacgacattcattcattcaaattgatagaatacatcagatacaa 8868065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 9799685 - 9799722
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  9799685 aaatgatattcattcattcaaattgatagagtacatca 9799722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 24186463 - 24186508
Alignment:
Q  245 tgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||| |||||| |||||||| |||||||||||||| ||||||||||    
T  24186463 tgattttcatttattcaaatagatagagtacatcatatacaaacat 24186508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 28240150 - 28240113
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatag 270  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  28240150 acaaaaacaaactgatattcattcattcaaatcgatag 28240113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 29939599 - 29939547
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||||||||  || |||||| ||||||||||||| ||||||||||||||||    
T  29939599 acaaaaacaaaac-atattcatttattcaaatcgatatagtacatcagatacaa 29939547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 34610146 - 34610093
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||||||| ||| || |||||||||||| |||| | ||||||||||||||    
T  34610146 acaaaaacaaaacgatatttattcattcaaattgatataatacatcagatacaa 34610093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 5457511 - 5457475
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  5457511 aaatgatattcattcattcaaattgatagagtacatc 5457475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 18890561 - 18890601
Alignment:
Q  297 agggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||| ||| || ||||||||||||||||||||||||    
T  18890561 agggtgaatctgcgaacaaactcacagcacccaagttaata 18890601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 24842742 - 24842786
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||| |||||||||| |||||||||||||| |||| ||||||    
T  24842742 aaatgatattcattcattaaaatcgatagagtatatcaaatacaa 24842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 28296783 - 28296819
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  28296783 aaatgatattcattcattcaaattgatagagtacatc 28296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 31712748 - 31712784
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  31712748 aaatgatattcattcattcaaattgatagagtacatc 31712784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 37971514 - 37971470
Alignment:
Q  293 gtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||| ||| || ||||||||| ||||||||||||||    
T  37971514 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaata 37971470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 39152917 - 39152961
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    ||||||| |||| ||| |||||||||||||||||||| |||||||    
T  39152917 acaaaaataaaacgatattcattcattcaaatcgataaagtacat 39152961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 42046531 - 42046484
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcag 280  Q
    ||||||||||||  ||| |||||||||||||||||||||| ||||||||    
T  42046531 gacaaaaacaaag-gatattcattcattcaaatcgatagaatacatcag 42046484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 37837250 - 37837362
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| || ||||||||||    
T  37837250 gacaaaaacaaac-gatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacag 37837348  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  37837349 cacccaagttaata 37837362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 8001341 - 8001450
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacc 327  Q
    |||| |||| ||| |||||||||||||||||||||||| ||||||||||||||||        ||||||||||||||| ||| || ||||||||||||||    
T  8001341 aaaataaaacgatattcattcattcaaatcgatagagtgcatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacc 8001440  T
Q  328 caagttaata 337  Q
    ||||||||||    
T  8001441 caagttaata 8001450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 12141099 - 12141212
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| || ||||||||| |    
T  12141099 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaaggtgaatatgcgaacaaactcacaac 12141198  T
Q  325 -acccaagttaata 337  Q
     |||||||||||||    
T  12141199 aacccaagttaata 12141212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 40993453 - 40993344
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacc 327  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||| ||| || ||||||||| ||||    
T  40993453 aaaacaaaacgatattcattcatttaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacc 40993354  T
Q  328 caagttaata 337  Q
    ||||||||||    
T  40993353 caagttaata 40993344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 39171402 - 39171494
Alignment:
Q  253 attcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  39171402 attcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcatagcacccaagttaata 39171494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 48061721 - 48061609
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||        ||||||||||||||| ||| || ||||||| | |    
T  48061721 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaggtacaaacatctctaaaaacgtaaagggtgaatctgcgaacaaactcataac 48061622  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  48061621 acccaagttaata 48061609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 28044547 - 28044605
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  28044547 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 28044605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 34899398 - 34899511
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||||||| || |||||||||||| |||||||||||||| ||||||||||        ||||||||||||||| ||| || |||||||||     
T  34899398 gacaaaaataaaatgatatttattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaa 34899497  T
Q  324 cacccaagttaata 337  Q
    || |||||||||||    
T  34899498 catccaagttaata 34899511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 9977001 - 9977059
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||    
T  9977001 gacaaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaaacat 9977059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 39328585 - 39328697
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat-------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||||||||||| ||| ||||||||||||||||||| || ||||||| ||||||||||       ||||||| ||| ||| ||| || ||| |||||||    
T  39328585 gacaaaaacaaaacgatattcattcattcaaatcgatggattacatcaaatacaaacatcgctaaaacgtaaaaggtaaatctgcgaacaaattcacagc 39328684  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  39328685 acccaagttaata 39328697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 28407712 - 28407822
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||        || |||||||| ||| ||| || ||||||||||||     
T  28407712 aaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacataaagggtaaatctgcgaacaaactcacagcat 28407811  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  28407812 ccaagttaata 28407822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 337
Target Start/End: Complemental strand, 47590591 - 47590498
Alignment:
Q  252 cattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||||||||||| |||||||| ||||||        ||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  47590591 cattcattcaaatcgatagagtatatcagatataaacatcgctgaaaacgtaaagggtaaatctgcaaacaaactcacaacacccaagttaata 47590498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 45349593 - 45349703
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    ||||| |||| ||| |||||| ||| ||||||||||||||||||||||||||| ||        ||||||||||||||  ||| || ||||||||| |||    
T  45349593 aaaaaaaaaacgatattcattaatttaaatcgatagagtacatcagatacaaatatcgctaaaaacgtaaagggtgaacctgcgaacaaactcacaacac 45349692  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  45349693 ccaagttaata 45349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 14627672 - 14627719
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  14627672 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 14627719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 17611694 - 17611647
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  17611694 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatca 17611647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 26492668 - 26492621
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  26492668 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 26492621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 42066836 - 42066883
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  42066836 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 42066883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 42978906 - 42978797
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| |||    |||||||||||| |||||||| ||||||||||||||||        ||||||||||||||| ||| ||  ||||||||     
T  42978906 gacaaaaacaaaacgat----attcattcaaattgatagagtccatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacgaactcacaa 42978811  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  42978810 cacccaagttaata 42978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 20083640 - 20083594
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| || ||||||||||||||||| |||||||||    
T  20083640 acaaaaacaaaatgatatttattcattcaaatcgatatagtacatca 20083594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 32684970 - 32684924
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  32684970 acaaaaacaaaatgatattcattcattcaaatcgagagactacatca 32684924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 34774013 - 34773967
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  34774013 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 34773967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 35261599 - 35261553
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  35261599 acaaaaacagaatgatattcattcattcaaattgatagagtacatca 35261553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 45198808 - 45198854
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  45198808 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 45198854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 48316610 - 48316716
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcag-atacaaacatacgtaaagggtgaatatgcaaataaactcacagcacccaa 330  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| |  |  ||    | | || |||||||||||| ||| || |||||||||||||||||    
T  48316610 gacaaaaacaaaacgatattcattcattcaaatcgatagagtatacaaacatcgctaaaaacctaaagggtgaatctgcgaacaaactcacagcacccaa 48316709  T
Q  331 gttaata 337  Q
    |||||||    
T  48316710 gttaata 48316716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 21266695 - 21266655
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagag 272  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  21266695 gacaaaaacaaaatgatattcattcattcaaatcgagagag 21266655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 1448606 - 1448641
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  1448606 gacaaaaacaaaatgatattcattcattcaaatcga 1448641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 1485030 - 1485077
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  1485030 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 1485077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 12502026 - 12502061
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12502026 gacaaaaacaaaatgatattcattcattcaaatcga 12502061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 12527660 - 12527695
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12527660 gacaaaaacaaaatgatattcattcattcaaatcga 12527695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 20116884 - 20116837
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||| ||||||||| |||||||||||||||||| ||| |||||||    
T  20116884 gacaaaaccaaaatgatattcattcattcaaatcgagagattacatca 20116837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 38880404 - 38880455
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 283  Q
    ||||||||||||| |||||||||| |||||||| | |||| |||||||||||    
T  38880404 gacaaaaacaaaacgatgttcatttattcaaattgttagaatacatcagata 38880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 46822318 - 46822271
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||||    
T  46822318 gacaaaaacaaaatgatattaattcattcaaatcgagagattacatca 46822271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 3267009 - 3267055
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| ||||||||||||||| | ||||||| ||||    
T  3267009 acaaaaacaaaatgatattcattcattcaaattgttagagtatatca 3267055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 24069182 - 24069232
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 283  Q
    |||||||||||| ||| |||||| ||||||||||||||| ||| |||||||    
T  24069182 acaaaaacaaaacgatattcattgattcaaatcgatagaatacctcagata 24069232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 28476459 - 28476413
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||| ||||||| |||||| ||||||||||||| ||||||||||    
T  28476459 acgtaaatggtgaatctgcaaacaaactcacagcactcaagttaata 28476413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 35495950 - 35495996
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||||    
T  35495950 acaaaaacaaaatgatattcaatcattcaaatcgagagattacatca 35495996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 3876033 - 3876086
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||||||||||| ||| ||| ||||||| |||||| ||||||| ||||||    
T  3876033 acaaaaacaaaatgatattctttcgttcaaattgatagaatacatcaaatacaa 3876086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 10574826 - 10574789
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  10574826 aaatgatattcattcattcaaattgatagagtacatca 10574789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 11344119 - 11344066
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||||||| ||| |||||| |||||||| |||| | ||||||||||||||    
T  11344119 acaaaaacaaaacgatattcatttattcaaattgatataatacatcagatacaa 11344066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 41553227 - 41553276
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    ||||||||||||| ||| |||||||||||||||  ||||| |||||||||    
T  41553227 gacaaaaacaaaacgatattcattcattcaaattaatagaatacatcaga 41553276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 3222897 - 3222945
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    |||||||||||||||| |||||||||| |||| |||| | |||||||||    
T  3222897 acaaaaacaaaatgatattcattcatttaaattgatataatacatcaga 3222945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 23425147 - 23425179
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaat 264  Q
    ||||||||||||||||| |||||||||||||||    
T  23425147 gacaaaaacaaaatgatattcattcattcaaat 23425179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 24610050 - 24610098
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcag 280  Q
    |||||||| |||||||| ||||||||||||||| |||| | ||||||||    
T  24610050 gacaaaaataaaatgatattcattcattcaaattgatataatacatcag 24610098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 25286982 - 25287030
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 283  Q
    ||||| |||| ||| || |||||||||||| ||||||||||||||||||    
T  25286982 aaaaataaaacgatatttattcattcaaattgatagagtacatcagata 25287030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 26017332 - 26017368
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  26017332 aaatgatattcattcattcaaattgatagagtacatc 26017368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 30992498 - 30992534
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  30992498 aaatgatattcattcattcaaattgatagagtacatc 30992534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 32312961 - 32312925
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  32312961 aaatgatattcattcattcaaattgatagagtacatc 32312925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 34893547 - 34893511
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  34893547 aaatgatattcattcattcaaattgatagagtacatc 34893511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 42603443 - 42603475
Alignment:
Q  246 gatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||||||||||||||| |||||||||||||    
T  42603443 gatgttcattcattcaaattgatagagtacatc 42603475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 46700331 - 46700279
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 287  Q
    |||||| ||| ||| ||||||||||| ||| ||||||||||||||| ||||||    
T  46700331 aaaaaccaaacgatattcattcattctaattgatagagtacatcaggtacaaa 46700279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 6011929 - 6012042
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || |||||||||     
T  6011929 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacat 6012028  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  6012029 cacccaagttaata 6012042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 13007526 - 13007413
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||        ||||||||||||||| |||||| ||||||||||    
T  13007526 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacag 13007427  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  13007426 cacccaagttaata 13007413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 9113516 - 9113629
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || ||||||| |     
T  9113516 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcagaa 9113615  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  9113616 cacccaagttaata 9113629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 38007654 - 38007541
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||  || ||||||||||    
T  38007654 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacatcgctaaaaacgtaaaaggtgaatatgtgaacaaactcacag 38007555  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  38007554 cacccaagttaata 38007541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 24229576 - 24229688
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||        |||||||| |||||| ||| || |||||||||||    
T  24229576 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatataaacatcgctaaaaacgtaaagagtgaatctgcgaacaaactcacagc 24229675  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  24229676 acccaagttaata 24229688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 14726252 - 14726365
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||  || ||||||||||    
T  14726252 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacatcactaaaaacgtaaagggtgaatctgtgaacaaactcacag 14726351  T
Q  324 cacccaagttaata 337  Q
    || |||||||||||    
T  14726352 catccaagttaata 14726365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 240 - 337
Target Start/End: Complemental strand, 25980446 - 25980341
Alignment:
Q  240 caaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaag 331  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||| |||||||        ||||||||||||||| |||||| ||||||||| ||||||||    
T  25980446 caaaacgatattcattcattcaaatcgatagagtatatcagatgcaaacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacatcacccaag 25980347  T
Q  332 ttaata 337  Q
    ||||||    
T  25980346 ttaata 25980341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 26825727 - 26825614
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| ||| ||||||||||||||||||||||||| |||| ||||||||||        ||||||||||||||| | | || ||||||||||    
T  26825727 gacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaaacatagctaaaaacgtaaagggtgaatctacgaacaaactcacag 26825628  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  26825627 cacccaagttaata 26825614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 34945690 - 34945577
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||| ||| ||| |||||| ||||||||||||||||||||||||||||||        ||||||||||||||| ||| || |||||||||     
T  34945690 gacaaaaataaaacgatattctttcattaaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaa 34945591  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  34945590 cacccaagttaata 34945577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 250 - 337
Target Start/End: Complemental strand, 38598076 - 38597981
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||| ||| || ||||||||| ||||||||||||||    
T  38598076 ttcattcattcaaattgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatttgcgaacaaactcacaacacccaagttaata 38597981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 8096293 - 8096402
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||        | ||||||||||||| ||| || ||||||||| |||    
T  8096293 aaaaacaaaacgatattcattcattcaaatcgatagagtacat-agatacaaacatcgctaaaaatgtaaagggtgaatttgcgaacaaactcacaccac 8096391  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  8096392 ccaagttaata 8096402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 13422229 - 13422117
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||        ||||||||| ||||||||| || |||||||||     
T  13422229 gacaaaaacaaaatgatattcattcattcaaattgataga-tacatcatatacaaacatcgctaaaaacgtaaaggatgaatatgcgaacaaactcacaa 13422131  T
Q  324 cacccaagttaata 337  Q
    || |||||||||||    
T  13422130 catccaagttaata 13422117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 14082188 - 14082245
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||    
T  14082188 acaaaaacaaaacgatatccattcattcaaatcgatagagcacatcagatacaaacat 14082245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 35851093 - 35851036
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||||||| |||||||||||||||| ||||| || |||||||||||||||    
T  35851093 acaaaaacaaaatgatattcattcattcaaatcaatagattatatcagatacaaacat 35851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 1409797 - 1409739
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| |||||| |||||||| | |||||||||||||||||||||||    
T  1409797 gacaaaaacaaaacgatattcatttattcaaattggtagagtacatcagatacaaacat 1409739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 11073779 - 11073835
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||| ||||||||||    
T  11073779 gacaaaaataaaatgatattcattcattcaaat--atagagtacatcatatacaaacat 11073835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 21060057 - 21060104
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  21060057 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 21060104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 26877901 - 26878013
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||| ||||| ||| ||||||||||| ||| |||||||||||||| ||||||||||        ||||||||| ||||| ||| || ||||||||| |    
T  26877901 acaaaatcaaaacgatattcattcattcgaattgatagagtacatcatatacaaacattggtaaaaacgtaaaggatgaatctgcgaacaaactcacaac 26878000  T
Q  325 acccaagttaata 337  Q
    | |||||||||||    
T  26878001 atccaagttaata 26878013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 34882022 - 34881975
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  34882022 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 34881975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 781692 - 781646
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  781692 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 781646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 8088004 - 8088054
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 282  Q
    ||||||||||||||||| ||||||||||||||| |||||| | ||||||||    
T  8088004 gacaaaaacaaaatgatattcattcattcaaattgatagaatgcatcagat 8088054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 18677242 - 18677287
Alignment:
Q  234 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||    
T  18677242 caaaaacaaaatgatattcattcattcaaatcgagagattacatca 18677287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 7242089 - 7242042
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  7242089 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 7242042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 7247264 - 7247217
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  7247264 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 7247217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 8984780 - 8984827
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||| ||| ||||||||||||||| |||||| |||||||    
T  8984780 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatca 8984827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 10649947 - 10649900
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  10649947 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 10649900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 10723058 - 10723003
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 287  Q
    ||||||||||||| ||| || |||||||||||| ||| |||||||||| |||||||    
T  10723058 gacaaaaacaaaacgatatttattcattcaaattgatcgagtacatcaaatacaaa 10723003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 27752230 - 27752183
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||| ||||||| |||||||||||||||||| ||| |||||||    
T  27752230 gacaaaaacgaaatgatattcattcattcaaatcgagagattacatca 27752183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 30371926 - 30371879
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| ||||||||||||||| || ||| |||||||    
T  30371926 gacaaaaacaaaatgatattcattcattcaaatagagagattacatca 30371879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 41184216 - 41184324
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagataca----aacatacgtaaagggtgaatatgcaaataaactcacagcaccc 328  Q
    |||||||||||||||| | |||||||||||||||| ||| |||||||   |||     | | ||||||||| ||||| ||| || |||||||||||| ||    
T  41184216 acaaaaacaaaatgatatgcattcattcaaatcgagagattacatcattaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatcc 41184315  T
Q  329 aagttaata 337  Q
    |||||||||    
T  41184316 aagttaata 41184324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 177754 - 177800
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    |||||||| |||||||| ||||||||||||||| ||| |||||||||    
T  177754 gacaaaaaaaaaatgatattcattcattcaaattgatggagtacatc 177800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 3271177 - 3271223
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||    
T  3271177 acaaaaacaaaatgataatcattcattcaaatcgagagattacatca 3271223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 28540764 - 28540810
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||| ||||||||| ||| || ||||||||||||||||||||||||    
T  28540764 acgtatagggtgaatctgcgaacaaactcacagcacccaagttaata 28540810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 43008090 - 43008136
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||| || |||||||||||||||||| ||| |||||||    
T  43008090 acaaaaacaaaataatattcattcattcaaatcgagagattacatca 43008136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 19280711 - 19280756
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||    
T  19280711 gacaaaaataaaatgatattcattcattcaaatcgagagattacat 19280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 4771150 - 4771099
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 287  Q
    |||||||||| ||| ||||||||||||||| ||||||||| || |||||||||    
T  4771150 aaaaacaaaacgatattcattcattcaaattgatagagtatat-agatacaaa 4771099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 5378742 - 5378706
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  5378742 aaatgatattcattcattcaaattgatagagtacatc 5378706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 17218163 - 17218127
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  17218163 aaatgatattcattcattcaaattgatagagtacatc 17218127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 27576160 - 27576200
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagt 273  Q
    ||||||||||||  || ||||||||||||||||||||||||    
T  27576160 acaaaaacaaaacaatattcattcattcaaatcgatagagt 27576200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 36057103 - 36057139
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgata 269  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  36057103 acaaaaataaaatgatattcattcattcaaatcgata 36057139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 40775201 - 40775165
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  40775201 aaatgatattcattcattcaaattgatagagtacatc 40775165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 5427661 - 5427774
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||| || ||||||||||    
T  5427661 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaagcgtaaagggtgaatctgcgaacaaactcacag 5427760  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  5427761 cacccaagttaata 5427774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 31788764 - 31788651
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || ||||||||||    
T  31788764 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacag 31788665  T
Q  324 cacccaagttaata 337  Q
    || |||||||||||    
T  31788664 catccaagttaata 31788651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 38445473 - 38445361
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||| ||| || |||||||||||    
T  38445473 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacattgttaaaaacgtaaaggatgaatctgcgaacaaactcacagc 38445374  T
Q  325 acccaagttaata 337  Q
    ||| |||||||||    
T  38445373 accaaagttaata 38445361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 35220634 - 35220523
Alignment:
Q  234 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagca 325  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||||||||||||| ||        ||||||||||||||||||| || ||||||||||||    
T  35220634 caaaaacaaaacgacattcattcattcaaattgatagagtacatcagatacaaagatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagca 35220535  T
Q  326 cccaagttaata 337  Q
    ||||||||||||    
T  35220534 cccaagttaata 35220523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 335
Target Start/End: Original strand, 31193129 - 31193239
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| || ||||||||| |    
T  31193129 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcactaaaaacgtaaagggtgaatttgcgaacaaactcacaac 31193228  T
Q  325 acccaagttaa 335  Q
    |||||| ||||    
T  31193229 acccaatttaa 31193239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 1415865 - 1415752
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||        |||| || ||||||| ||| || |||||||||     
T  1415865 gacaaaaacaaaatgatattcattcattcaaatcgatagattacatcagatacaaacatcgctaaaaacgttaaaggtgaatctgcgaacaaactcacaa 1415766  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  1415765 cacccaagttaata 1415752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 4779061 - 4778948
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||| ||| || ||||||||||    
T  4779061 gacaaaaacaaaactatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacag 4778962  T
Q  324 cacccaagttaata 337  Q
    ||||||| ||||||    
T  4778961 cacccaaattaata 4778948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 18763776 - 18763663
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||        ||||||||||||||| ||| || |||||||||     
T  18763776 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaatatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaa 18763677  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  18763676 cacccaagttaata 18763663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 33585527 - 33585640
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||        ||||||||| ||||||||| || |||||||||     
T  33585527 gacaaaaacaaaacgatattctttcattcaaatcaatagagtacatcagatacaaacatcgttaaaaacgtaaaggatgaatatgcgaacaaactcacaa 33585626  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  33585627 cacccaagttaata 33585640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 33924013 - 33923900
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| ||        | ||||| ||||||||||| || ||||||||||    
T  33924013 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaaaatcgctaaaaaggtaaaaggtgaatatgcgaacaaactcacag 33923914  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  33923913 cacccaagttaata 33923900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 1421979 - 1421871
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacc 327  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||        ||||||| ||||||| |||||| ||||||||| ||||    
T  1421979 aaaaaaaaatgatattcattcattcaaatcgataaagtacatcagatacaaacatcactaaaaacgtaaa-ggtgaatctgcaaacaaactcacaacacc 1421881  T
Q  328 caagttaata 337  Q
    ||||||||||    
T  1421880 caagttaata 1421871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 4041386 - 4041499
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||        ||||||||||||||| ||| || |||||||||     
T  4041386 gacaaaaataaaatgatattcattcattcaaatcgatagtgtacatcagatacaaaaatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaa 4041485  T
Q  324 cacccaagttaata 337  Q
    |||| |||||||||    
T  4041486 cacctaagttaata 4041499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 329
Target Start/End: Original strand, 36942914 - 36943019
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||| ||| || | ||||||||    
T  36942914 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacatactcacag 36943013  T
Q  324 caccca 329  Q
    ||||||    
T  36943014 caccca 36943019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 36692181 - 36692069
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||  || ||||||||| |    
T  36692181 acaaaaacaaaacgatatacattcattcaaatcgatagagtacatcagatacaaacatcgctaagaacgtaaagggtgaatctgtgaacaaactcacaac 36692082  T
Q  325 acccaagttaata 337  Q
    | |||||||||||    
T  36692081 aaccaagttaata 36692069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 11985028 - 11985083
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  11985028 aaaaaaaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 11985083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 37876398 - 37876456
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||    
T  37876398 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacat 37876456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 12677246 - 12677356
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    |||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||        || |||||||||||| ||| |||||||||| |  ||    
T  12677246 aaaaacaaaacgatattcattcattcaaatcgacagattacatcagatacaaacatcgctaaaaacataaagggtgaatctgcgaataaactcataatac 12677345  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  12677346 ccaagttaata 12677356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 7646786 - 7646673
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||| ||| ||| ||        ||||||| ||||||| ||| || |||||||||     
T  7646786 gacaaaaacaaaacgatattcattcattcaaatcgataaagtacatcaaatataaagatcgctaaaaacgtaaaaggtgaatctgcgaacaaactcacaa 7646687  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  7646686 cacccaagttaata 7646673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 12553961 - 12554015
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||    
T  12553961 gacaaaaataaaatgatattcattcattcaaattgatagagtatatcagatacaa 12554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 30923250 - 30923296
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacatca 30923296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 14416473 - 14416420
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||||||||||| || |||||||||||| |||||| ||||||||||||||    
T  14416473 acaaaaacaaaatgatatttattcattcaaattgatagaatacatcagatacaa 14416420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 25508861 - 25508918
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||| ||| || |||||||||||| |||||||||||||| ||||||||||    
T  25508861 acaaaaacaaaacgatatttattcattcaaattgatagagtacatcatatacaaacat 25508918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 29173512 - 29173622
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    |||||||||||||| || |||||||||||| ||| || ||||||||||||||||||        ||||||||| ||||| ||| || ||||||||| |||    
T  29173512 aaaaacaaaatgatatttattcattcaaattgattgattacatcagatacaaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacac 29173611  T
Q  327 ccaagttaata 337  Q
    | |||||||||    
T  29173612 caaagttaata 29173622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 32448409 - 32448458
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  32448409 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatcaga 32448458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 7677665 - 7677778
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| ||||||  || |||| ||||||||| |||||||| ||||||        ||||||| ||||||  |||||| ||||||||||    
T  7677665 gacaaaaacaaaacgatattcatttttttaaattgatagagtatatcagatataaacatcgctaaaaacgtaaaaggtgaacttgcaaacaaactcacag 7677764  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  7677765 cacccaagttaata 7677778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 4193144 - 4193097
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  4193144 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 4193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 9374337 - 9374384
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||    
T  9374337 gacaaaaacaaaacgatattcattcattcaaatcgacagagtacatca 9374384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 10929903 - 10929860
Alignment:
Q  294 taaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  10929903 taaagggtgaatatgcaaacaaactcacagcatccaagttaata 10929860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 25087342 - 25087295
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  25087342 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 25087295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 31580429 - 31580476
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  31580429 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 31580476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 36234305 - 36234258
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  36234305 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 36234258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 281039 - 280993
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||    
T  281039 acgtaaagggtgaatctgcgaacaaactcacagcacccaagttaata 280993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 3309186 - 3309140
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  3309186 acgtatagggtgaatctgcgaataaactcacagcacccaagttaata 3309140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 4228429 - 4228383
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  4228429 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 4228383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 21570183 - 21570229
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  21570183 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 21570229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 27097266 - 27097312
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  27097266 acgtaaagggtgaatctgcaaacaaactcacaacacccaagttaata 27097312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 32913535 - 32913489
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  32913535 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 32913489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 37994591 - 37994542
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    ||||||||||||| ||| ||||||||||||||| |||||| |||||||||    
T  37994591 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 37994542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 38575263 - 38575307
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||    
T  38575263 aaaaacaaaatgatattcattcattcaaatcgagagattacatca 38575307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 2808247 - 2808282
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2808247 gacaaaaacaaaatgatattcattcattcaaatcga 2808282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 3725487 - 3725440
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||| ||||||||||| ||| |||||||    
T  3725487 gacaaaaacaaaatgatattcatttattcaaatcgagagattacatca 3725440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 7015485 - 7015532
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||||    
T  7015485 gacaaaaacaaaatgatatttattcattcaaatcgagagattacatca 7015532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 8806173 - 8806126
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  8806173 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 8806126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 8971402 - 8971449
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| | |||||||||||||||| ||| |||||||    
T  8971402 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatca 8971449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 9986116 - 9986163
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| ||||||||| |||||||| ||| |||||||    
T  9986116 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatca 9986163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 17248943 - 17249052
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa-------acatacgtaaagggtgaatatgcaaataaactcacagcacc 327  Q
    ||||| |||||||| |||||||||||||||||||| | |||||||||  |||       | | ||||||| | ||||| ||| || ||||||||||||||    
T  17248943 aaaaataaaatgatattcattcattcaaatcgataaaatacatcagaatcaagatcgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcacc 17249042  T
Q  328 caagttaata 337  Q
    ||||||||||    
T  17249043 caagttaata 17249052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 22422035 - 22422000
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22422035 gacaaaaacaaaatgatattcattcattcaaatcga 22422000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 27248925 - 27248960
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27248925 gacaaaaacaaaatgatattcattcattcaaatcga 27248960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 459051 - 459097
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||| |||| ||| ||||||||||||||||||||||||| ||||    
T  459051 acaaaaataaaacgatattcattcattcaaatcgatagagtatatca 459097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 4100635 - 4100593
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    |||||||||| ||| |||||||||||||||||||||| |||||    
T  4100635 aaaaacaaaacgatattcattcattcaaatcgatagattacat 4100593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 4903938 - 4903984
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||    
T  4903938 acaaaaacaaaacgatattcattcatttaaattgatagagtacatca 4903984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 8308398 - 8308356
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||    
T  8308398 aaaacaaaacgatattcattcattcaaatcgatagattacatc 8308356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 12554040 - 12554086
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||||||    
T  12554040 acgtaaagggtgaatctgcgaacaaactcacaacacccaagttaata 12554086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 14955848 - 14955794
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||||||||||||| |||||||||| |||| |||||| ||||| ||| ||||    
T  14955848 gacaaaaacaaaatgatattcattcatttaaattgatagaatacataagagacaa 14955794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 33759977 - 33760028
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||||||||| || |||||||||||||||||  ||||||||| ||||||||    
T  33759977 acaaaaacaaaataatattcattcattcaaatcg--agagtacattagatacaa 33760028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 34600521 - 34600475
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  34600521 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatc 34600475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 41328047 - 41328005
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagta 274  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||    
T  41328047 gacaaaaacaaaacgatattcattcattcaaattgatagagta 41328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 11550340 - 11550377
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  11550340 aaatgatattcattcattcaaattgatagagtacatca 11550377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 36175305 - 36175358
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||| |||||||| ||||||||||||||| || |||| |||||| ||||||    
T  36175305 acaaaaataaaatgatattcattcattcaaattgacagagaacatcaaatacaa 36175358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 41431335 - 41431290
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||    
T  41431335 gacaaaaataaaatgatattcattcattcaaatcgagagattacat 41431290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 4878408 - 4878444
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  4878408 aaatgatattcattcattcaaattgatagagtacatc 4878444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 8809580 - 8809544
Alignment:
Q  241 aaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  8809580 aaaatgatattcattcattcaaattgatagagtacat 8809544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 8971468 - 8971512
Alignment:
Q  293 gtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||| ||||||||| || |||||||||||| |||||||||||    
T  8971468 gtaaaggatgaatatgcgaacaaactcacagcatccaagttaata 8971512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 12366308 - 12366272
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  12366308 aaatgatattcattcattcaaattgatagagtacatc 12366272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 15920314 - 15920278
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  15920314 aaatgatattcattcattcaaattgatagagtacatc 15920278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 18141155 - 18141191
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  18141155 aaatgatattcattcattcaaattgatagagtacatc 18141191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 26025270 - 26025302
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaat 264  Q
    ||||||||||||||||| |||||||||||||||    
T  26025270 gacaaaaacaaaatgatattcattcattcaaat 26025302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 28037389 - 28037345
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||| |||||||| |||||||||||| ||||||| |||||||||    
T  28037389 aaaaataaaatgatattcattcattcagatcgatatagtacatca 28037345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 30399824 - 30399872
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 283  Q
    ||||| |||||||| |||||| |||||||| ||| ||||||||||||||    
T  30399824 aaaaataaaatgatattcatttattcaaattgatcgagtacatcagata 30399872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 30420973 - 30420929
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  30420973 aaaaataaaatgatattcattcattcaaatcgagagattacatca 30420929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 37613900 - 37613944
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtaca 276  Q
    |||||||||||||  || ||||| |||||||||||||||||||||    
T  37613900 gacaaaaacaaaaccatattcatccattcaaatcgatagagtaca 37613944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 40125825 - 40125782
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||    
T  40125825 aaatgatattcattcattcaaattgatagagtacat-agatacaa 40125782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 40625834 - 40625878
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||| ||||| |||||||||||| ||| |||||||    
T  40625834 aaaaacaaaatgatattcatccattcaaatcgagagattacatca 40625878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 49504386 - 49504499
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||        ||||||||||||||| ||| || ||||||||||    
T  49504386 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacataagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacag 49504485  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  49504486 cacccaagttaata 49504499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 11462274 - 11462386
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||| | | || |||||||||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaatggtgaatctacgaacaaactcacagc 11462373  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  11462374 acccaagttaata 11462386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 14872939 - 14872827
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||        | ||||||||||||||||| || |||||||||||    
T  14872939 acaaaaacaaaatgatattcattcatttaaatcgatagagtacatcacatacaaacatcgcagaagaagtaaagggtgaatatgcgaacaaactcacagc 14872840  T
Q  325 acccaagttaata 337  Q
    | |||||||||||    
T  14872839 atccaagttaata 14872827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 21695315 - 21695368
Alignment:
Q  81 tgtgtcaatatttttcatttcgaattagatgacaagaaaaatgatatagaagag 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21695315 tgtgtcaatatttttcatttcgaattagatgacaagaaaaatgatatagaagag 21695368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 44915940 - 44915832
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||        ||||||||| ||||||||| || |||||||||     
T  44915940 gacaaaaataaaatgatattcattcattcaaattgatagagtacatcagatacaaacatcactaaaaacgtaaaggatgaatatgcgaacaaactcacat 44915841  T
Q  324 cacccaagt 332  Q
    |||||||||    
T  44915840 cacccaagt 44915832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 16989668 - 16989559
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacc 327  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||        ||||||| ||| ||| |||||| ||||||||||||||    
T  16989668 aaaacaaaacgattttcattcattcaaatcgatagattacatcatatacaaacatcactaaaaacgtaaatggtaaatctgcaaacaaactcacagcacc 16989569  T
Q  328 caagttaata 337  Q
    ||||||||||    
T  16989568 caagttaata 16989559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 29738456 - 29738568
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||  ||| |||| ||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||| ||  |||||||||    
T  29738456 gacaaaaacaaac-gatattcaatcattcaaatcgatagagtacatcagatacaaacatcactaaaaacgtaaagggtgaatctgcgaacgaactcacag 29738554  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  29738555 cacccaagttaata 29738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 10776253 - 10776365
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| ||||||| |||||||        ||||||||||||||  ||| || |||||||||||    
T  10776253 acaaaaacaaaatgatattcgttcattcaaattgatagagtatatcagatgcaaacatcgctaaaaacgtaaagggtgaaattgcgaacaaactcacagc 10776352  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  10776353 acccaagttaata 10776365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 21687678 - 21687566
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||| ||| || ||||||||| |    
T  21687678 acaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacatcgctagaaacgtaaaaggtgaatctgctaacaaactcacaac 21687579  T
Q  325 acccaagttaata 337  Q
    |||||| ||||||    
T  21687578 acccaaattaata 21687566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 26535637 - 26535578
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacata 291  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  26535637 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaaacata 26535578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 51373652 - 51373762
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcac 326  Q
    ||||| |||| ||||||||||||||||||| |||| ||||||| ||||||||||||        ||||||||||||||| | |||| ||||||||| |||    
T  51373652 aaaaataaaacgatgttcattcattcaaattgataaagtacattagatacaaacatcgataaaaacgtaaagggtgaatctccaaacaaactcacaacac 51373751  T
Q  327 ccaagttaata 337  Q
    |||||||||||    
T  51373752 ccaagttaata 51373762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 35484191 - 35484295
Alignment:
Q  241 aaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagt 332  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||        | |||||||| |||| ||| || ||||||||| |||||||||    
T  35484191 aaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaatgtaaagggcgaatctgcgaacaaactcacaacacccaagt 35484290  T
Q  333 taata 337  Q
    |||||    
T  35484291 taata 35484295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 41081478 - 41081525
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41081478 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatca 41081525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 7337454 - 7337512
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||| | || ||| |||||||||||||||||||||||||||||||||||||||||    
T  7337454 gacaaaaatataacgatattcattcattcaaatcgatagagtacatcagatacaaacat 7337512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 36894200 - 36894254
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 287  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  36894200 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaa 36894254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 4413414 - 4413357
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||| ||| || |||| |||||||||||||||||||||||||||||||||    
T  4413414 acaaaaacaaaacgatatttattcgttcaaatcgatagagtacatcagatacaaacat 4413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 32395298 - 32395241
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaaca 289  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||| |||||||||    
T  32395298 gacaaaaacaaaacgatattcatccattcaaatcgatagagtacatcaaatacaaaca 32395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 34878069 - 34878182
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||  ||||||        ||||||| ||||||| ||  || |||||||||     
T  34878069 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatggaaacatcgctaaaaacgtaaaaggtgaatctgtgaacaaactcacaa 34878168  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  34878169 cacccaagttaata 34878182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 24583247 - 24583201
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 24583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 24583443 - 24583397
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 24583397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 5984117 - 5984024
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacatacgtaaagggtgaatatgcaaataaactcacagcacccaag 331  Q
    ||||||||||||| ||| |||||||||||||||||||||| || ||||||            |||||||||||||||| || ||||||||| ||||||||    
T  5984117 gacaaaaacaaaacgatattcattcattcaaatcgatagaatatatcaga------------taaagggtgaatatgcgaacaaactcacatcacccaag 5984030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 21947413 - 21947522
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacc 327  Q
    |||| |||| ||| |||||||||||||||||||||||||||||| ||||||| ||        | ||||||||| ||| ||| || ||||||||| ||||    
T  21947413 aaaataaaacgatattcattcattcaaatcgatagagtacatcatatacaaatatcgttaaaaatgtaaagggtaaatctgcgaacaaactcacatcacc 21947512  T
Q  328 caagttaata 337  Q
    ||||||||||    
T  21947513 caagttaata 21947522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 35461914 - 35461958
Alignment:
Q  293 gtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  35461914 gtaaagggtgaatctgcgaataaactcacagcacccaagttaata 35461958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 39888483 - 39888370
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| ||||||||| ||||| |||| | ||||||||||||||||||        |||||||| |||||| ||| ||||||||||||     
T  39888483 gacaaaaacaaaacgatattcattcatacaaattgatataatacatcagatacaaacatcactcaaaacgtaaagagtgaatctgcgaataaactcacaa 39888384  T
Q  324 cacccaagttaata 337  Q
    || | |||||||||    
T  39888383 catctaagttaata 39888370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 940536 - 940481
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||| ||||||||||||    
T  940536 aaaaacaaaacgatattcattcatttaaatcaatagagtacataagatacaaacat 940481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 27456790 - 27456743
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  27456790 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatca 27456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 30879382 - 30879335
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  30879382 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 30879335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 48217744 - 48217697
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  48217744 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 48217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 8211098 - 8211156
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||||||||||||  || |||||||| |||| |||||||||||||| ||||||||||||    
T  8211098 gacaaaaacaaaacaatattcattcaatcaattcgatagagtacattagatacaaacat 8211156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 290
Target Start/End: Original strand, 23289187 - 23289241
Alignment:
Q  236 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    |||| |||| ||| |||||||||||||||||||||| ||||||| ||||||||||    
T  23289187 aaaataaaacgatattcattcattcaaatcgatagattacatcatatacaaacat 23289241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 35584398 - 35584444
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  35584398 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 35584444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 44543571 - 44543460
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa-------acatacgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||||||||  |||       | | ||||||||| ||||| ||| || |||||||||||    
T  44543571 gacaaaaacaaaatgatattcat-cattcaaatcaatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagc 44543473  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  44543472 acccaagttaata 44543460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 1742570 - 1742476
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaat 336  Q
    ||||||||||||||||| || | ||||||||||| ||||||        ||||||||||||||| ||  |||||||||||| |||||||||||||    
T  1742570 ttcattcattcaaatcgctatattacatcagatataaacatcgctaaaaacgtaaagggtgaatctgtgaataaactcacatcacccaagttaat 1742476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 20266609 - 20266564
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||    
T  20266609 gacaaaaacaaaatgatattcattcattcaaatcgagagattacat 20266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 27579920 - 27580032
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacatacg---------taaagggtgaatatgcaaataaactcacag 323  Q
    ||||||| ||||| || |||||| |||||||| |||||||||||||| ||||||||| |||         |||||||||||| ||| || |||||||||     
T  27579920 acaaaaataaaataatattcatttattcaaattgatagagtacatcatatacaaaca-acgctaaaatgataaagggtgaatctgcgaacaaactcacaa 27580018  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  27580019 cacccaagttaata 27580032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 47133203 - 47133154
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    ||||||||||||| ||| ||||||||||||||| |||||| |||||||||    
T  47133203 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 47133154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 44637723 - 44637679
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 277  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  44637723 acaaaaataaaatgatattcattcattccaatcgatagagtacat 44637679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 45415859 - 45415746
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| |  |||||||||||  |||||||||||||| ||||| | ||        ||||||||||||||||||| || |||||||||     
T  45415859 gacaaaaacaaaacgatatcaattcattcaaaatgatagagtacatcatatacacatatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacaa 45415760  T
Q  324 cacccaagttaata 337  Q
    ||||||| ||||||    
T  45415759 cacccaaattaata 45415746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 50377624 - 50377511
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| ||||||||||||||| ||||   ||||||||||| ||||||        ||||||||| ||||  ||| || |||||| |||    
T  50377624 gacaaaaacaaaacgatattcattcattcaaattgataagatacatcagatataaacatcgctaaaaacgtaaaggatgaaattgcgaacaaactctcag 50377525  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  50377524 cacccaagttaata 50377511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 9686979 - 9687014
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9686979 gacaaaaacaaaatgatattcattcattcaaatcga 9687014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 34519435 - 34519400
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcga 267  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34519435 gacaaaaacaaaatgatattcattcattcaaatcga 34519400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 51868419 - 51868466
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  51868419 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 51868466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 7343028 - 7342982
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  7343028 acaaaaataaaatgatattcattcattcaaatcgagagattacatca 7342982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 14489506 - 14489460
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||||||| ||||||||| ||  |||||||||||||    
T  14489506 acgtaaagggtgaatatgctaataaactctcaatacccaagttaata 14489460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 15431458 - 15431515
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||| ||||||||| ||||||||||| |||  | ||||||||||||||||||||||    
T  15431458 gacaaaatcaaaatgatattcattcattc-aattaacagagtacatcagatacaaacat 15431515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 19596252 - 19596302
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 283  Q
    |||||||||||||||| ||| |||||||||||| ||||| ||||| |||||    
T  19596252 acaaaaacaaaatgatattcgttcattcaaatcaatagattacattagata 19596302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 19715733 - 19715779
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  19715733 acgtaaaggatgaatctgcgaataaactcacagcatccaagttaata 19715779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 19723556 - 19723510
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  19723556 acgtaaaggatgaatctgcgaataaactcacagcatccaagttaata 19723510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 31317970 - 31317924
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||||||    
T  31317970 acgtaaagggtgaatttgcgaacaaactcacatcacccaagttaata 31317924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 37720007 - 37720053
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||| ||||||| |||||| ||||||||| ||||||||||||||    
T  37720007 acgtaaaaggtgaatttgcaaacaaactcacaacacccaagttaata 37720053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 48750419 - 48750373
Alignment:
Q  291 acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||| ||||||||||||| || ||||||||| ||||||||||||||    
T  48750419 acgtatagggtgaatatgcgaacaaactcacaacacccaagttaata 48750373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 27914881 - 27914914
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatc 265  Q
    ||||||||||||||||| ||||||||||||||||    
T  27914881 gacaaaaacaaaatgatattcattcattcaaatc 27914914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 30712083 - 30712116
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatc 265  Q
    ||||||||||||||||| ||||||||||||||||    
T  30712083 gacaaaaacaaaatgatattcattcattcaaatc 30712116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 33486687 - 33486732
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| |||| ||| ||||||||||||||| |||||||||||||    
T  33486687 acaaaaaaaaaacgatattcattcattcaaattgatagagtacatc 33486732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 33816942 - 33816975
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatc 265  Q
    ||||||||||||||||| ||||||||||||||||    
T  33816942 gacaaaaacaaaatgatcttcattcattcaaatc 33816975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 33876412 - 33876445
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatc 265  Q
    ||||||||||||||||| ||||||||||||||||    
T  33876412 gacaaaaacaaaatgatcttcattcattcaaatc 33876445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 38647024 - 38646987
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  38647024 aaatgatattcattcattcaaattgatagagtacatca 38646987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 3871711 - 3871667
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  3871711 aaaaataaaatgatattcattcattcaaatcgagagattacatca 3871667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 8893732 - 8893696
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  8893732 aaatgatattcattcattcaaattgatagagtacatc 8893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 11709484 - 11709528
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  11709484 aaaaataaaatgatattcattcattcaaatcgagagattacatca 11709528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 12967407 - 12967443
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  12967407 aaatgatattcattcattcaaattgatagagtacatc 12967443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 18569088 - 18569120
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcga 267  Q
    |||||||||||||| ||||||||||||||||||    
T  18569088 aaaaacaaaatgatattcattcattcaaatcga 18569120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 26771546 - 26771510
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  26771546 aaatgatattcattcattcaaattgatagagtacatc 26771510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 34659315 - 34659351
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  34659315 aaatgatattcattcattcaaattgatagagtacatc 34659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 45805606 - 45805650
Alignment:
Q  235 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  45805606 aaaaataaaatgatattcattcattcaaatcgagagattacatca 45805650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 45841234 - 45841198
Alignment:
Q  250 ttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  45841234 ttcattcattcaaatcgataaagtacatcaaatacaa 45841198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 46589588 - 46589552
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  46589588 aaatgatattcattcattcaaattgatagagtacatc 46589552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 49652275 - 49652239
Alignment:
Q  242 aaatgatgttcattcattcaaatcgatagagtacatc 278  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  49652275 aaatgatattcattcattcaaattgatagagtacatc 49652239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 71661 - 71774
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| |||  ||| |||||||||| |||||||||||||||||||||||||        ||||||||||||||| | | || ||||||||||    
T  71661 gacaaaaacaaaaagatactcagtcattcaaattgatagagtacatcagatacaaacatcgctagaaacgtaaagggtgaatctccgaacaaactcacag 71760  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  71761 cacccaagttaata 71774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 9834 - 9946
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    ||||| ||||||  || ||||||||||||||||||||||||||| |||||||||||||        ||||||||||||||| ||| || |||||||||||    
T  9834 acaaagacaaaacaatattcattcattcaaatcgatagagtacaccagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagc 9933  T
Q  325 acccaagttaata 337  Q
    |||||||| ||||    
T  9934 acccaagtcaata 9946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 1765 - 1877
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||| ||||||||||| |||||||||||||||||||||| | |||||| |||||||||        ||||||||||||||| ||| || ||||||| | |    
T  1765 acaataacaaaatgatattcattcattcaaatcgatagaatgcatcaggtacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcataac 1864  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  1865 acccaagttaata 1877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 15790 - 15677
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacag 323  Q
    ||||||||||||| ||| || |||| ||||||||||| ||||||||||| |||||||||        || ||||| |||||| ||| || ||||||||||    
T  15790 gacaaaaacaaaacgatatttattccttcaaatcgattgagtacatcagttacaaacatcgctaaaaacataaagagtgaatctgcgaacaaactcacag 15691  T
Q  324 cacccaagttaata 337  Q
    ||||||||||||||    
T  15690 cacccaagttaata 15677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 201148 - 201194
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||    
T  201148 acaaaaacaaaatgatattcattcattcaaatcgatagattacatca 201194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 31066 - 31123
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 290  Q
    ||||||| |||| ||| ||||||||||||||| |||| ||||||||||||||||||||    
T  31066 acaaaaataaaacgatattcattcattcaaattgatatagtacatcagatacaaacat 31123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 1613 - 1529
Alignment:
Q  261 aaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    |||| |||||||||||||||||||||||||        ||||||||||||||| |||||| ||||||||| || |||||||||||    
T  1613 aaattgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacatccaagttaata 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 1670 - 1629
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagt 273  Q
    ||||||||||||| ||| |||||||||||||||| |||||||    
T  1670 gacaaaaacaaaacgatattcattcattcaaatcaatagagt 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 14664 - 14775
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagc 324  Q
    |||||||||||||||  ||||||||||||||| |||| ||||||||| ||||||||||        |  |||||| ||||| ||| || |||||||||||    
T  14664 acaaaaacaaaatgaa-ttcattcattcaaattgataaagtacatcatatacaaacatcactaaaaatataaaggatgaatttgcgaacaaactcacagc 14762  T
Q  325 acccaagttaata 337  Q
    |||||||||||||    
T  14763 acccaagttaata 14775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 8025 - 7971
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    |||||||| |||| ||| ||||||||||||||| |||||||||||||| ||||||    
T  8025 gacaaaaaaaaaacgatattcattcattcaaattgatagagtacatcaaatacaa 7971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 7941 - 7900
Alignment:
Q  296 aagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    |||||||||||||| || ||||||||| ||||||||||||||    
T  7941 aagggtgaatatgcgaacaaactcacaacacccaagttaata 7900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 51005 - 50961
Alignment:
Q  293 gtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||    
T  51005 gtaaagggtgaatctgcgaacaaactcacagcacccaagttaata 50961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 32562 - 32651
Alignment:
Q  256 cattcaaatcgatagagtacatcagatacaaacat--------acgtaaagggtgaatatgcaaataaactcacagcacccaagttaata 337  Q
    |||||||| ||||||||||||||||||||||||||        ||||||||||||||| ||  || ||||||||| ||| ||||||||||    
T  32562 cattcaaaacgatagagtacatcagatacaaacatggctaaaaacgtaaagggtgaatctgggaacaaactcacaacactcaagttaata 32651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 26827 - 26874
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||| |||||||| |||||||||| |||| ||||||||||||||    
T  26827 gacaaaaataaaatgatattcattcattaaaattgatagagtacatca 26874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 53192 - 53239
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    ||||||||||||| ||| ||||||||||||||| |||| |||||||||    
T  53192 gacaaaaacaaaacgatattcattcattcaaattgatatagtacatca 53239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 93413 - 93364
Alignment:
Q  234 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 283  Q
    |||||| |||||||| ||||||||||||||| |||| | |||||||||||    
T  93413 caaaaataaaatgatattcattcattcaaattgataaaatacatcagata 93364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 8989 - 8947
Alignment:
Q  237 aaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||| |||||||||||||||||| ||| |||||||    
T  8989 aaacaaaatgatattcattcattcaaatcgagagattacatca 8947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 83212 - 83258
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 279  Q
    |||||||||||||||| |||||||||||||||| | ||| |||||||    
T  83212 acaaaaacaaaatgatattcattcattcaaatcaagagattacatca 83258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 4455 - 4401
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 286  Q
    ||||||| |||||| || ||||||||||||||| |||| | ||||||||||||||    
T  4455 gacaaaagcaaaataatattcattcattcaaattgataaaatacatcagatacaa 4401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 16094 - 16126
Alignment:
Q  232 gacaaaaacaaaatgatgttcattcattcaaat 264  Q
    ||||||||||||||||| |||||||||||||||    
T  16094 gacaaaaacaaaatgatattcattcattcaaat 16126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 57881 - 57929
Alignment:
Q  233 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 281  Q
    |||||||||||| ||| |||||||||| |||| |||||| |||||||||    
T  57881 acaaaaacaaaacgatattcattcatttaaattgatagaatacatcaga 57929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University