View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10992_low_20 (Length: 311)
Name: NF10992_low_20
Description: NF10992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10992_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 42983346 - 42983132
Alignment:
| Q |
1 |
tctaaccattctctttttctctctctacaaacgcttctccaaaccccacaaacacaaccaaaaaaccaaactttctgataattctccttcacaacccgac |
100 |
Q |
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| T |
42983346 |
tctaaccattctctttttctctctctacaaacgcttctccaaaccccacaaacacaaccaaaaaaccaaactttctgataattctccttcacaacccgac |
42983247 |
T |
|
| Q |
101 |
ccaattagcccgacccatttatcaaaatcgattctttttgaagttctcccctctgattccgctaaatgggataccttgttcgatgacccggattcagttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42983246 |
ccaattagcccgacccatttatcaaaatcgattctttttgaagttctcccctctgattccgctaaatgggataccttgttcgatgacccggattcagttt |
42983147 |
T |
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| Q |
201 |
tggaagttccatcgg |
215 |
Q |
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||||||||||||||| |
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| T |
42983146 |
tggaagttccatcgg |
42983132 |
T |
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