View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10992_low_6 (Length: 598)

Name: NF10992_low_6
Description: NF10992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10992_low_6
NF10992_low_6
[»] chr8 (18 HSPs)
chr8 (199-459)||(6348454-6348714)
chr8 (504-588)||(6349972-6350056)
chr8 (46-101)||(31700143-31700198)
chr8 (47-101)||(35683131-35683185)
chr8 (46-101)||(11077138-11077193)
chr8 (46-101)||(13545366-13545421)
chr8 (46-101)||(13679052-13679107)
chr8 (46-101)||(24835139-24835194)
chr8 (46-101)||(37099558-37099613)
chr8 (46-101)||(39317727-39317782)
chr8 (46-101)||(43097653-43097708)
chr8 (467-504)||(6351578-6351615)
chr8 (46-101)||(8239102-8239157)
chr8 (46-101)||(20092844-20092899)
chr8 (46-97)||(42130852-42130903)
chr8 (46-101)||(40104364-40104419)
chr8 (46-88)||(6348271-6348313)
chr8 (170-202)||(28249845-28249877)
[»] chr3 (19 HSPs)
chr3 (46-101)||(36401948-36402003)
chr3 (46-101)||(49324830-49324885)
chr3 (46-100)||(26501327-26501381)
chr3 (46-101)||(47647884-47647939)
chr3 (46-101)||(228345-228400)
chr3 (46-97)||(16479162-16479213)
chr3 (46-101)||(41182738-41182793)
chr3 (46-101)||(44204970-44205025)
chr3 (46-101)||(46469473-46469528)
chr3 (46-101)||(53816902-53816957)
chr3 (46-101)||(39354075-39354130)
chr3 (46-101)||(39587506-39587561)
chr3 (46-101)||(47372304-47372359)
chr3 (46-101)||(48065888-48065943)
chr3 (46-101)||(49165219-49165274)
chr3 (46-101)||(3938987-3939042)
chr3 (46-101)||(47012877-47012932)
chr3 (162-204)||(8735025-8735067)
chr3 (162-204)||(9087266-9087308)
[»] chr7 (17 HSPs)
chr7 (46-101)||(41793648-41793703)
chr7 (46-101)||(26794291-26794346)
chr7 (56-101)||(36311211-36311256)
chr7 (49-101)||(114259-114311)
chr7 (46-101)||(35582587-35582642)
chr7 (46-101)||(38247251-38247306)
chr7 (46-101)||(43459112-43459167)
chr7 (49-101)||(15030154-15030206)
chr7 (46-101)||(7252824-7252879)
chr7 (46-97)||(32523776-32523827)
chr7 (46-101)||(33951892-33951947)
chr7 (46-101)||(35795424-35795479)
chr7 (46-101)||(37971269-37971324)
chr7 (46-101)||(38001183-38001238)
chr7 (46-101)||(44867006-44867061)
chr7 (46-97)||(46255824-46255875)
chr7 (162-199)||(114376-114413)
[»] chr5 (19 HSPs)
chr5 (46-101)||(24853420-24853475)
chr5 (46-98)||(2605708-2605760)
chr5 (46-97)||(8735662-8735713)
chr5 (46-97)||(37884390-37884441)
chr5 (46-99)||(6430707-6430760)
chr5 (46-97)||(5336325-5336376)
chr5 (46-101)||(8198349-8198404)
chr5 (46-101)||(12724647-12724702)
chr5 (46-101)||(12786130-12786185)
chr5 (46-101)||(20336607-20336662)
chr5 (46-101)||(38678578-38678633)
chr5 (56-101)||(18809952-18809997)
chr5 (46-101)||(3557590-3557645)
chr5 (46-101)||(13821220-13821275)
chr5 (46-101)||(16512705-16512760)
chr5 (46-88)||(1708834-1708876)
chr5 (50-85)||(22192796-22192831)
chr5 (46-97)||(37013708-37013759)
chr5 (46-101)||(37029407-37029462)
[»] chr4 (34 HSPs)
chr4 (46-101)||(1603751-1603806)
chr4 (46-101)||(5419795-5419850)
chr4 (46-101)||(35159687-35159742)
chr4 (46-101)||(51890127-51890182)
chr4 (46-101)||(52416048-52416103)
chr4 (46-101)||(6964393-6964448)
chr4 (50-101)||(47984046-47984097)
chr4 (46-101)||(49375270-49375325)
chr4 (46-101)||(55137605-55137660)
chr4 (46-101)||(56318747-56318802)
chr4 (52-101)||(28779902-28779951)
chr4 (46-98)||(40728998-40729050)
chr4 (46-97)||(2012857-2012908)
chr4 (46-101)||(16024833-16024888)
chr4 (46-101)||(33282022-33282077)
chr4 (46-101)||(40690544-40690599)
chr4 (46-101)||(51539582-51539637)
chr4 (46-101)||(52917035-52917090)
chr4 (46-97)||(55609655-55609706)
chr4 (46-101)||(56462783-56462838)
chr4 (46-100)||(13753239-13753293)
chr4 (46-97)||(4189006-4189057)
chr4 (46-101)||(4353558-4353613)
chr4 (46-97)||(9035229-9035280)
chr4 (46-101)||(38988213-38988268)
chr4 (46-101)||(44109536-44109591)
chr4 (46-101)||(45230036-45230091)
chr4 (46-100)||(18559516-18559570)
chr4 (61-99)||(53513270-53513308)
chr4 (51-99)||(45925553-45925600)
chr4 (46-101)||(28310000-28310055)
chr4 (46-101)||(38217399-38217454)
chr4 (46-101)||(45657064-45657119)
chr4 (46-99)||(15541949-15542002)
[»] chr2 (14 HSPs)
chr2 (46-101)||(45117976-45118031)
chr2 (46-101)||(5461910-5461965)
chr2 (46-101)||(38702720-38702775)
chr2 (46-101)||(41962706-41962761)
chr2 (46-101)||(45235193-45235248)
chr2 (46-101)||(13279643-13279698)
chr2 (46-101)||(15912681-15912736)
chr2 (46-101)||(43334638-43334693)
chr2 (46-101)||(38209299-38209354)
chr2 (46-101)||(44761001-44761056)
chr2 (173-206)||(5935260-5935293)
chr2 (46-101)||(17136817-17136872)
chr2 (46-97)||(30489888-30489939)
chr2 (173-204)||(34951111-34951142)
[»] chr1 (27 HSPs)
chr1 (46-101)||(37953112-37953167)
chr1 (46-98)||(41899466-41899518)
chr1 (46-101)||(10310085-10310140)
chr1 (46-101)||(29962364-29962419)
chr1 (46-101)||(44497447-44497502)
chr1 (46-101)||(44753161-44753216)
chr1 (46-99)||(33802298-33802351)
chr1 (50-101)||(12523269-12523320)
chr1 (46-101)||(12699667-12699722)
chr1 (46-101)||(22859637-22859692)
chr1 (46-101)||(41087384-41087439)
chr1 (46-101)||(41092152-41092207)
chr1 (56-101)||(3516752-3516797)
chr1 (46-101)||(7197559-7197614)
chr1 (46-101)||(14586450-14586505)
chr1 (46-101)||(23983145-23983200)
chr1 (46-101)||(39600690-39600745)
chr1 (46-101)||(42881732-42881787)
chr1 (46-99)||(4853323-4853376)
chr1 (46-101)||(3470278-3470333)
chr1 (46-101)||(30233713-30233768)
chr1 (46-101)||(41724448-41724503)
chr1 (46-101)||(50261109-50261164)
chr1 (46-88)||(12529343-12529385)
chr1 (162-199)||(12523163-12523200)
chr1 (173-206)||(49852816-49852849)
chr1 (57-101)||(22333388-22333432)
[»] chr6 (15 HSPs)
chr6 (47-101)||(29437441-29437495)
chr6 (46-101)||(481658-481713)
chr6 (46-101)||(11975940-11975995)
chr6 (46-101)||(31319484-31319539)
chr6 (46-100)||(34540543-34540597)
chr6 (46-94)||(16396310-16396358)
chr6 (46-101)||(18574869-18574924)
chr6 (46-101)||(31722015-31722070)
chr6 (46-101)||(34951363-34951418)
chr6 (59-101)||(440022-440064)
chr6 (48-101)||(304726-304779)
chr6 (46-101)||(9304118-9304173)
chr6 (46-97)||(18584750-18584801)
chr6 (162-199)||(2539439-2539476)
chr6 (170-199)||(31721916-31721945)
[»] scaffold0168 (1 HSPs)
scaffold0168 (46-100)||(17952-18006)


Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 199 - 459
Target Start/End: Original strand, 6348454 - 6348714
Alignment:
Q  199 aaactcaatagtcagagagctttgccaatgattattctctatttttacaaccgataattttcttaatcttgtcattttcaagataaaagaccactaattc 298  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6348454 aaacccaatagtcagagagctttgccaatgattattctctagttttacacccgataattttcttaatcttgtcattttcaagataaaagaccactaattc 6348553  T
Q  299 agaaaacgagaatgagaagggaagtggcaaacgaactttgactcgtaaaggcaaattaaagcatgacaatgtcttgataggggaaacttaaaatcctaac 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  6348554 agaaaacgagaatgagaagggaagtggcaaacgaactttgactcgtaaaggcaaattaaagcatgacaatgtctagataggggaaacttaaattcctaac 6348653  T
Q  399 atttcatgggaaggtaataattgtctcaatcgatttccagaactaacacttccttcattta 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6348654 atttcatgggaaggtaataattgtctcaatcgatttccagaactaacacttccttcattta 6348714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 6349972 - 6350056
Alignment:
Q  504 acgcaggttctattgtaacttctttcatttattactttcgttgttcttttgcttgatctattcttttttccatgtctattctctg 588  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6349972 acgcaggttctattgtaacttctttcatttattactttcgttgttcttttgcttgatctattcttttttccatgtctattctctg 6350056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 31700198 - 31700143
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  31700198 attgcaaaagttctggtaaaacattattccggattttcaaatatggaaacatctgc 31700143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 35683185 - 35683131
Alignment:
Q  47 ttgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  35683185 ttgcaaaagttctggtaaaatattattccggattttcaaatccggaaacatctgc 35683131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 11077138 - 11077193
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  11077138 attgcaaaagttctggtaaaatattattctggattttcaaatccggaaacatctgc 11077193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 13545421 - 13545366
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||| |||||||||||  ||||||||||||    
T  13545421 attgcaaaagttctggtaaaacattattccagattttcaaatacggaaacatctgc 13545366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 13679052 - 13679107
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||| |||||||||||  ||||||||||||    
T  13679052 attgcaaaagttctggtaaaacattattccagattttcaaatacggaaacatctgc 13679107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 24835139 - 24835194
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||||||||||||||||||||||||||| |||| |||||||  |||||||||||    
T  24835139 attgcaaaaattctggtaaaacattattccagattatcaaatccagaaacatctgc 24835194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 37099558 - 37099613
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||    
T  37099558 attgcaaaagttctggtaaaacattattctggattttcaaatccgaaaacatctgc 37099613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 39317782 - 39317727
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| ||||||||||||||||||||||||||||  |||||||||||    
T  39317782 attgcaaaagttctcgtaaaacattattccggattttcaaatccagaaacatctgc 39317727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 43097708 - 43097653
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  43097708 attgcaaaagttctggtaaaacattattctggattttaaaatccggaaacatctgc 43097653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 467 - 504
Target Start/End: Complemental strand, 6351615 - 6351578
Alignment:
Q  467 atattttttgtatgttaatatttcttccttgcttgtta 504  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6351615 atattttttgtatgttaatatttcttccttgcttgtta 6351578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 8239157 - 8239102
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||  |||||||||||    
T  8239157 attgcaaaagttctggtaaaatattattctggattttcaaatccagaaacatctgc 8239102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 20092844 - 20092899
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || || |||||||||||||||||||||||||||  |||||||||||    
T  20092844 attgcaaaagttttgataaaacattattccggattttcaaatccagaaacatctgc 20092899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 42130903 - 42130852
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| |||||||||||||||||||| ||||||||||||  |||||||    
T  42130903 attgcaaaacttctggtaaaacattattccagattttcaaatccagaaacat 42130852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 40104419 - 40104364
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||||||||||||||||||| ||||| | ||| ||||||    
T  40104419 attgcaaaacttatggtaaaacattattccggattttaaaatccgaaaatatctgc 40104364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 6348271 - 6348313
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatc 88  Q
    ||||||||| || |||||||| |||||||||||||||||||||    
T  6348271 attgcaaaagttatggtaaaatattattccggattttcaaatc 6348313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 28249845 - 28249877
Alignment:
Q  170 gcaaggaaagacatagggtggaaaaagtaaaac 202  Q
    |||||||||| ||||||||||||||||||||||    
T  28249845 gcaaggaaaggcatagggtggaaaaagtaaaac 28249877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 36402003 - 36401948
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36402003 attgcaaaacttctggtaaaacattattccggattttcaaatctggaaacatctgc 36401948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 49324885 - 49324830
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  49324885 attgcaaaagttctggtaaaacattattccggattttcaaatccggaaacatctgc 49324830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 26501381 - 26501327
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  26501381 attgcaaaacttctggtaaaacattattccggattttcaaatccggaaacatctg 26501327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 47647884 - 47647939
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  47647884 attgcaaaacttctggtaaaacattattacggattttcaaatccggaaacatctgc 47647939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 228345 - 228400
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||    
T  228345 attgcaaaacttctggtaaaacattattccggattgtcaaatccgaaaacatctgc 228400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 16479162 - 16479213
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  16479162 attgcaaaagttctggtaaaacattattccagattttcaaatccggaaacat 16479213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 41182738 - 41182793
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||| ||||||||||||||  |||||||||||    
T  41182738 attgcaaaacttctggtaaaacattatttcggattttcaaatccagaaacatctgc 41182793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 44205025 - 44204970
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||    
T  44205025 attgcaaaagttctggtaaaacattattccggatattgaaatccggaaacatctgc 44204970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 46469528 - 46469473
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  46469528 attgcaaaagttctggtaaaacattattccgaattttaaaatccggaaacatctgc 46469473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 53816902 - 53816957
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||||||||||||||||||| || |||||||||||||  ||||||||||||    
T  53816902 attgcaaaaattctggtaaaacattctttcggattttcaaattcggaaacatctgc 53816957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 39354075 - 39354130
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||| |||||||||| |||||||||||||  |||||||||||    
T  39354075 attgcaaaagttctggtagaacattattctggattttcaaatccagaaacatctgc 39354130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 39587506 - 39587561
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||| |||| |||||||||||||||||||  |||||||||||| ||||||||||||    
T  39587506 attgtaaaagttctggtaaaacattattctagattttcaaatccggaaacatctgc 39587561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 47372359 - 47372304
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||| ||| |||||||||||||||||||| |||||||||||| | ||||||||||    
T  47372359 attgctaaagttctggtaaaacattattccagattttcaaatccgaaaacatctgc 47372304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 48065888 - 48065943
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||| |||| ||||||||||| ||||||||||||||||||||| | ||||||||||    
T  48065888 attgtaaaagttctggtaaaatattattccggattttcaaatccgaaaacatctgc 48065943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 49165274 - 49165219
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||| ||||| ||||||||||||| ||||| ||||||||||||    
T  49165274 attgcaaaagttctggttaaacactattccggattttaaaatccggaaacatctgc 49165219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 3939042 - 3938987
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||| |||||||||||| | ||||||||||| | ||||||||||    
T  3939042 attgcaaaagttctggaaaaacattattctgaattttcaaatccgaaaacatctgc 3938987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 47012932 - 47012877
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||||||||||||||||||  ||||  ||||||||||||    
T  47012932 attgcaaaacttatggtaaaacattattccggatttaaaaattcggaaacatctgc 47012877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 8735067 - 8735025
Alignment:
Q  162 taggacgtgcaaggaaagacatagggtggaaaaagtaaaactc 204  Q
    |||||||||||||||||||||||| |||  |||||||||||||    
T  8735067 taggacgtgcaaggaaagacatagtgtgagaaaagtaaaactc 8735025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 9087308 - 9087266
Alignment:
Q  162 taggacgtgcaaggaaagacatagggtggaaaaagtaaaactc 204  Q
    |||||||||||||||||||||||| |||  |||||||||||||    
T  9087308 taggacgtgcaaggaaagacatagtgtgagaaaagtaaaactc 9087266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 41793648 - 41793703
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  41793648 attgcaaaagttctagtaaaacattattccggattttcaaatctggaaacatctgc 41793703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 26794291 - 26794346
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  26794291 attgcaaaagttctggtaaaacattattccggattttcaaatccgaaaacatctgc 26794346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 36311256 - 36311211
Alignment:
Q  56 ttctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  36311256 ttctggtaaaacattattctggattttcaaatctggaaacatctgc 36311211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 114259 - 114311
Alignment:
Q  49 gcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  114259 gcaaaagttctggtaaaacattattccagattttcaaatccggaaacatctgc 114311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 35582642 - 35582587
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || ||||||||||||||||||||||||||||||  |||||||||||    
T  35582642 attgcaaaagttatggtaaaacattattccggattttcaaatccagaaacatctgc 35582587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 38247306 - 38247251
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||||    
T  38247306 attgcaaaacttctggtaaaatattattccagattttcaaatccggaaacatctgc 38247251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 43459112 - 43459167
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||| |||||||||||  |||||||||||    
T  43459112 attgcaaaagttctggtaaaacattattccgaattttcaaatccagaaacatctgc 43459167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 15030206 - 15030154
Alignment:
Q  49 gcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||| ||||||||||||||||||||||||||  |||| |||||||||||||    
T  15030206 gcaaaagttctggtaaaacattattccggatttgaaaatttggaaacatctgc 15030154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 7252879 - 7252824
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||  ||||||||||||    
T  7252879 attgcaaaagttctggtaaaacattattctggatttttaaattcggaaacatctgc 7252824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 32523827 - 32523776
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| | ||||||    
T  32523827 attgcaaaagttctggtaaaacattattccgaattttcaaatccgtaaacat 32523776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 33951892 - 33951947
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||| |||||| ||||  ||||||||||||    
T  33951892 attgcaaaacttctggtaaaacattattccagatttttaaattcggaaacatctgc 33951947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 35795424 - 35795479
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||||||||||||||||||| ||| |||||||||||||   ||||||||||    
T  35795424 attgcaaaaattctggtaaaacattcttctggattttcaaatccataaacatctgc 35795479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 37971269 - 37971324
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||||||||||| ||||||||||||| | ||||||||||    
T  37971269 attgcaaaagttatggtaaaacattattcaggattttcaaatccgaaaacatctgc 37971324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 38001183 - 38001238
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||| | ||||||||||    
T  38001183 attgcaaaagttctggtaaaacattattccgaatttttaaatccgaaaacatctgc 38001238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 44867006 - 44867061
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||| |||||   ||||||||||    
T  44867006 attgcaaaacttctggtaaaacattattccggattttaaaatccaaaaacatctgc 44867061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 46255824 - 46255875
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| || || ||||||||||||||||||||||||||| ||||||||    
T  46255824 attgcaaaagttatgctaaaacattattccggattttcaaatccggaaacat 46255875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 114376 - 114413
Alignment:
Q  162 taggacgtgcaaggaaagacatagggtggaaaaagtaa 199  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  114376 tagggcgtgcgaggaaagacatagggtggaaaaagtaa 114413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 24853475 - 24853420
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  24853475 attgcaaaacttctggtaaaacattattccggattttcaaatccggaaacatctgc 24853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 2605760 - 2605708
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatc 98  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  2605760 attgcaaaagttctggtaaaacattattccggattttcaaatccggaaacatc 2605708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 8735662 - 8735713
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  8735662 attgcaaaacttctggtaaaacattattccggattttcaaatctgaaaacat 8735713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 37884390 - 37884441
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  37884390 attgcaaaaattctggtgaaacattattccggattttcaaatccggaaacat 37884441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 6430760 - 6430707
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatct 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  6430760 attgcaaaagttctggtaaaacattattccggattttcaaatccagaaacatct 6430707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 5336376 - 5336325
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  5336376 attgcaaaagttctagtaaaacattattccggattttcaaatccggaaacat 5336325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 8198349 - 8198404
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  8198349 attgcaaaacttctggtaaaacattattctggattttcaaatccggaaatatctgc 8198404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 12724647 - 12724702
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||    
T  12724647 attgcaaaacttctagtaaaacattattccggattttcaaattcggaaacatctgc 12724702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 12786130 - 12786185
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||    
T  12786130 attgcaaaacttctagtaaaacattattccggattttcaaattcggaaacatctgc 12786185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 20336662 - 20336607
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | || |||||||    
T  20336662 attgcaaaagttctggtaaaacattattccggattttcaaatccgaaagcatctgc 20336607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 38678633 - 38678578
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  38678633 attgcaaaacttctggtaaaacattattctggattttcaaatccggaaatatctgc 38678578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 18809952 - 18809997
Alignment:
Q  56 ttctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||    
T  18809952 ttctggtaaaacattattcctgattttcaaatccggaaacatctgc 18809997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 3557590 - 3557645
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||||||||||| |||||||||||||  |||||||||||    
T  3557590 attgcaaaagttatggtaaaacattattctggattttcaaatcctgaaacatctgc 3557645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 13821275 - 13821220
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| |||||||||||||| ||||||||||||| | ||||||||||    
T  13821275 attgcaaaacttctcgtaaaacattattctggattttcaaatccgaaaacatctgc 13821220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 16512760 - 16512705
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||||||||||| ||||||||||||| |||||||  ||||| ||||||||||||    
T  16512760 attgcaaaaattctagtaaaacattatttcggatttgaaaatccggaaacatctgc 16512705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 1708876 - 1708834
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatc 88  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  1708876 attgcaaaagttctagtaaaacattattccggattttcaaatc 1708834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 22192796 - 22192831
Alignment:
Q  50 caaaaattctggtaaaacattattccggattttcaa 85  Q
    ||||| ||||||||||||||||||||||||||||||    
T  22192796 caaaagttctggtaaaacattattccggattttcaa 22192831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 37013708 - 37013759
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| |||| |||||||||||||| ||||||||||||| | ||||||    
T  37013708 attgcaaaagttctagtaaaacattattctggattttcaaatccgaaaacat 37013759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 37029462 - 37029407
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||| |||| || ||||||||||||||| |||||||||||||| | ||||||||||    
T  37029462 attgaaaaagttatggtaaaacattatttcggattttcaaatccgaaaacatctgc 37029407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 4e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 1603751 - 1603806
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  1603751 attgcaaaagttctggtaaaacattattccagattttcaaatctggaaacatctgc 1603806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 5419795 - 5419850
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  5419795 attgcaaaagttctggtaaaacattattccggattttcaaatccggaaacatctgc 5419850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 35159687 - 35159742
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  35159687 attgcaaaagttctggtaaaacattattccggattttcaaatccggaaacatctgc 35159742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 51890127 - 51890182
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  51890127 attgcaaaagttctggtaaaacattattccggattttcaaatccggaaacatctgc 51890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 52416103 - 52416048
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  52416103 attgcaaaacttctggtaaaacattattccggattttcaaatccggaaacatctgc 52416048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 6964393 - 6964448
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  6964393 attgcaaaagttctggtaaaacattattccgtattttaaaatctggaaacatctgc 6964448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 47984097 - 47984046
Alignment:
Q  50 caaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  47984097 caaaagttctggtaaaacattattccggattttcaaatccggaaacatctgc 47984046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 49375270 - 49375325
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  49375270 attgcaaaagttctggtaaaacattattccggattttcaaatccagaaacatctgc 49375325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 55137605 - 55137660
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  55137605 attgcaaaagttctggtaaaacattattccggattttcaaatccgaaaacatctgc 55137660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 56318747 - 56318802
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  56318747 attgcaaaagttctggtaaaacattattccgaattttcaaatccggaaacatctgc 56318802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 28779951 - 28779902
Alignment:
Q  52 aaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  28779951 aaaattctggtaaaacattattctggattttcaaatccggaaacatctgc 28779902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 40728998 - 40729050
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatc 98  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  40728998 attgcaaaacttctgggagaacattattccggattttcaaatctggaaacatc 40729050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 2012908 - 2012857
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  2012908 attgcaaaagttctggtaaaacattattccggattttcaaattcggaaacat 2012857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 16024833 - 16024888
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  16024833 attgcaaaacttctgataaaacattattctggattttcaaatccggaaacatctgc 16024888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 33282022 - 33282077
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||||||||||    
T  33282022 attgcaaaagttcaagtaaaacattattccggattttcaaatccggaaacatctgc 33282077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 40690599 - 40690544
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||    
T  40690599 attgcaaaagttctggtaaaacattattctggattttcaaatccgaaaacatctgc 40690544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 51539582 - 51539637
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||||||||| |||||| || ||||||||||||||||| ||||||||||||    
T  51539582 attgcaaaaattctgataaaactttcttccggattttcaaatccggaaacatctgc 51539637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 52917090 - 52917035
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||    
T  52917090 attgcaaaagttctggtaaaacattattctggattttcaaatccgaaaacatctgc 52917035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 55609706 - 55609655
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  55609706 attgcaaaagttctggtaaaacattattccagattttcaaatccggaaacat 55609655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 56462838 - 56462783
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||    
T  56462838 attgcaaaagttctggtaaaacattatttcggattttcaaatccgaaaacatctgc 56462783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 13753239 - 13753293
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctg 100  Q
    ||||||||| |||||||||| |||||| ||||||||||||||| |||||||||||    
T  13753239 attgcaaaagttctggtaaaccattatcccggattttcaaatccggaaacatctg 13753293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 4189057 - 4189006
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| || || ||||||||||||||||||||||||||| ||||||||    
T  4189057 attgcaaaagttttgttaaaacattattccggattttcaaatccggaaacat 4189006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 4353558 - 4353613
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||| |||| ||||||||||||||||||||||||||||||||  | ||||||||||    
T  4353558 attgtaaaagttctggtaaaacattattccggattttcaaattcgaaaacatctgc 4353613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 9035280 - 9035229
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| ||||||||||||||||||||||||||  ||||| ||||||||    
T  9035280 attgcaaaagttctggtaaaacattattccggatttgaaaatccggaaacat 9035229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 38988268 - 38988213
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||  |||||  |||||||||||    
T  38988268 attgcaaaagttctggtaaaacattattccggatttgaaaatccagaaacatctgc 38988213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 44109536 - 44109591
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||| |||| |||||||||||||||||||| |||||| ||||| ||||||||||||    
T  44109536 attgtaaaacttctggtaaaacattattccagattttaaaatccggaaacatctgc 44109591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 45230036 - 45230091
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||||||||||| ||||||||||||  ||||||||||||    
T  45230036 attgcaaaacttatggtaaaacattattctggattttcaaattcggaaacatctgc 45230091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 18559570 - 18559516
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctg 100  Q
    ||||||||| ||||||||||| |||||| |||||||| ||||| |||||||||||    
T  18559570 attgcaaaagttctggtaaaatattatttcggattttaaaatccggaaacatctg 18559516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 53513270 - 53513308
Alignment:
Q  61 gtaaaacattattccggattttcaaatctggaaacatct 99  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  53513270 gtaaaacattattccggattttcaaatccggaaacatct 53513308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 45925553 - 45925600
Alignment:
Q  51 aaaaattctggtaaaacattattccggattttcaaatctggaaacatct 99  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  45925553 aaaatttctggtaaa-cattattccggattttcaaatccggaaacatct 45925600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 28310055 - 28310000
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||| ||||||||||||| |||| || ||||| ||||||||||||    
T  28310055 attgcaaaagttctgataaaacattattcaggatatttaaatccggaaacatctgc 28310000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 38217454 - 38217399
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||| |||| |||||||||||||||||| |  ||||||||||| ||||||||||||    
T  38217454 attgaaaaacttctggtaaaacattatttcaaattttcaaatccggaaacatctgc 38217399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 45657119 - 45657064
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| |||||||||||||| ||||||| |||||  |||||||||||    
T  45657119 attgcaaaagttctagtaaaacattattctggattttaaaatccagaaacatctgc 45657064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 15542002 - 15541949
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatct 99  Q
    ||||||||| || |||||||||||||||||| ||||| |||||  |||||||||    
T  15542002 attgcaaaagttttggtaaaacattattccgaattttaaaatccagaaacatct 15541949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 45117976 - 45118031
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  45117976 attgcaaaaattctggtaaaacattcttccggattttcaagtctggaaacatctgc 45118031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 5461965 - 5461910
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  5461965 attgcaaaagttctggtaaaacattattccggattttcaaatccgaaaacatctgc 5461910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 38702775 - 38702720
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  38702775 attgcaaaacttctggttaaacattattccggattttcaaatccggaaacatctgc 38702720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 41962706 - 41962761
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  41962706 attgcaaaagttctggtaaaacattatttcggattttcaaatccggaaacatctgc 41962761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 45235193 - 45235248
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  45235193 attgcaaaacttctggtaaaacattattccggattttcaaatccgaaaacatctgc 45235248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 13279643 - 13279698
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| ||||||||||||| |||||||||||||| ||||||||||||    
T  13279643 attgcaaaagttctagtaaaacattatttcggattttcaaatccggaaacatctgc 13279698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 15912681 - 15912736
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  15912681 attgcaaaacttctggtaaaacattattctggattttcaaatccggaaaaatctgc 15912736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 43334638 - 43334693
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||| ||||||||||||||||||||| ||||||||||||    
T  43334638 attgcaaaagttgtggtaaaatattattccggattttcaaatccggaaacatctgc 43334693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 38209299 - 38209354
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||  ||||| ||||||||||||||||||||| ||||||||||||    
T  38209299 attgcaaaagttctcctaaaatattattccggattttcaaatccggaaacatctgc 38209354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 44761001 - 44761056
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||| || ||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  44761001 attgcagaacttctggtaaaatattattctggattttcaaatccggaaacatctgc 44761056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 5935293 - 5935260
Alignment:
Q  173 aggaaagacatagggtggaaaaagtaaaactcaa 206  Q
    ||||||||||||||||||||||||||||||||||    
T  5935293 aggaaagacatagggtggaaaaagtaaaactcaa 5935260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 17136872 - 17136817
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||||||||||||||||||  ||||| | ||||||||||    
T  17136872 attgcaaaacttatggtaaaacattattccggatttgaaaatccgaaaacatctgc 17136817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 30489939 - 30489888
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| || |||||| ||||||||| ||||||||||||| ||||||||    
T  30489939 attgcaaaagttatggtaagacattattctggattttcaaatccggaaacat 30489888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 34951111 - 34951142
Alignment:
Q  173 aggaaagacatagggtggaaaaagtaaaactc 204  Q
    ||||||||||||||||||||||||||||||||    
T  34951111 aggaaagacatagggtggaaaaagtaaaactc 34951142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 37953112 - 37953167
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  37953112 attgcaaaacttctggtaaaacattattccggattttcaaatccggaaacatctgc 37953167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 41899518 - 41899466
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatc 98  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  41899518 attgcaaaagttctggtaaaacattattccggattttcaaatccggaaacatc 41899466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 10310140 - 10310085
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  10310140 attgcaaaagttctagtaaaacattattccggattttcaaatcgggaaacatctgc 10310085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 29962364 - 29962419
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  29962364 attgcaaaacttctggtaaaacattattccggattttcaaatccgaaaacatctgc 29962419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 44497447 - 44497502
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  44497447 attgcaaaacttctggtaaaacattattccggattttcaaatccgaaaacatctgc 44497502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 44753216 - 44753161
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  44753216 attgcaaaacttctggtaaaacattattccggatttttaaatccggaaacatctgc 44753161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 33802298 - 33802351
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatct 99  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||    
T  33802298 attgcaaaacttctggtaaaacattattccggatttttaaatctgaaaacatct 33802351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 12523320 - 12523269
Alignment:
Q  50 caaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  12523320 caaaagttatggtaaaacattattccggattttcaaatccggaaacatctgc 12523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 12699722 - 12699667
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||||||||||||||||||||||||| | ||||||||||    
T  12699722 attgcaaaatttttggtaaaacattattccggattttcaaatccgaaaacatctgc 12699667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 22859637 - 22859692
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| | ||||||||||    
T  22859637 attgcaaaacttctggtaaaacagtattccggattttcaaatccgaaaacatctgc 22859692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 41087384 - 41087439
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  41087384 attgcaaaagttctagtaaaacattattccagattttcaaatccggaaacatctgc 41087439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 41092152 - 41092207
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  41092152 attgcaaaagttctagtaaaacattattccagattttcaaatccggaaacatctgc 41092207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 3516797 - 3516752
Alignment:
Q  56 ttctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  3516797 ttctgataaaacattattccggattttcaaatccggaaacatctgc 3516752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 7197614 - 7197559
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||| ||||||||||||||| ||| |||||||| ||||||||||||    
T  7197614 attgcaaaagttctagtaaaacattattccagatcttcaaatccggaaacatctgc 7197559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 14586505 - 14586450
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||| ||||||  |||| ||||||||||||    
T  14586505 attgcaaaacttctggtaaaacattattcctgattttttaatccggaaacatctgc 14586450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 23983200 - 23983145
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || |||||||||||||||||| ||||||| ||| ||||||||||||    
T  23983200 attgcaaaagttatggtaaaacattattccgaattttcatatccggaaacatctgc 23983145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 39600690 - 39600745
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  39600690 attgcaaaagttctggtaaaatattattccggatttttaaatccgaaaacatctgc 39600745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 42881787 - 42881732
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||    
T  42881787 attgcaaaagttctggtaaaatattattccgggttttcaaattcggaaacatctgc 42881732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 4853323 - 4853376
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatct 99  Q
    ||||||||| || ||||||||||||||||||||||||||| |  ||||||||||    
T  4853323 attgcaaaagttttggtaaaacattattccggattttcaatttcggaaacatct 4853376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 3470333 - 3470278
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || ||||||||||||||||| |||| ||||||| | ||||||||||    
T  3470333 attgcaaaagttatggtaaaacattattccagattgtcaaatccgaaaacatctgc 3470278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 30233713 - 30233768
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||| ||||||||||||| | ||||||||||||| | ||||||||    
T  30233713 attgcaaaacttctgataaaacattattctgaattttcaaatctgaatacatctgc 30233768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 41724448 - 41724503
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||| |||||||||  |||||||||||||  |||||||||||    
T  41724448 attgcaaaacttctggtataacattattttggattttcaaatccagaaacatctgc 41724503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 50261164 - 50261109
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| | || ||||||||||||| |||||||| ||||| ||||||||||||    
T  50261164 attgcaaaagtcctcgtaaaacattatttcggattttaaaatccggaaacatctgc 50261109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 12529343 - 12529385
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatc 88  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||    
T  12529343 attgcaaaagttctggtaaaatattattccggattttaaaatc 12529385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 12523200 - 12523163
Alignment:
Q  162 taggacgtgcaaggaaagacatagggtggaaaaagtaa 199  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  12523200 tagggcgtgcgaggaaagacatagggtggaaaaagtaa 12523163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 49852816 - 49852849
Alignment:
Q  173 aggaaagacatagggtggaaaaagtaaaactcaa 206  Q
    |||||||||||||||||| |||||||||||||||    
T  49852816 aggaaagacatagggtgggaaaagtaaaactcaa 49852849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 22333432 - 22333388
Alignment:
Q  57 tctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||||||||||||| |||||||||||| | | ||||||||    
T  22333432 tctggtaaaacattattccagattttcaaatccgaagacatctgc 22333388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 29437441 - 29437495
Alignment:
Q  47 ttgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  29437441 ttgcaaaagttctggtaaaacattattccggattttcaaatccggaaacatctgc 29437495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 481658 - 481713
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  481658 attgcaaaagttctggtaaaacattattctggattttcaaatccggaaacatctgc 481713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 11975940 - 11975995
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  11975940 attgcaaaacttctggtaaaacattattccggattttcaaatccgaaaacatctgc 11975995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 31319484 - 31319539
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  31319484 attgcaaaagttctggtaaaacattattccggattttcaaatccgaaaacatctgc 31319539  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 34540597 - 34540543
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctg 100  Q
    ||||||||| ||||||||||||||||||  ||||||||||||| |||||||||||    
T  34540597 attgcaaaagttctggtaaaacattattttggattttcaaatccggaaacatctg 34540543  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 16396310 - 16396358
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaa 94  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  16396310 attgcaaaatttctggtaaaatattattccggattttcaaatccggaaa 16396358  T

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Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 18574869 - 18574924
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||| ||||||| ||||||||| ||||||||||| ||||||||||||    
T  18574869 attgcaaaagttcaggtaaaatattattccgaattttcaaatccggaaacatctgc 18574924  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 31722070 - 31722015
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| ||| |||||||||||||||||||||||||||   ||||||||||||    
T  31722070 attgcaaaacttcgggtaaaacattattccggattttcaaactcggaaacatctgc 31722015  T

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Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 34951363 - 34951418
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| |||||||||||||||||||| |||||||||| |  |||||||||||    
T  34951363 attgcaaaagttctggtaaaacattattccagattttcaaacccagaaacatctgc 34951418  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 440022 - 440064
Alignment:
Q  59 tggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  440022 tggtaaaacattattccggatttttaaatccggaaacatctgc 440064  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 304726 - 304779
Alignment:
Q  48 tgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||| ||||||||||| ||||||| ||||||||||||| | ||||||||||    
T  304726 tgcaaaagttctggtaaaatattattctggattttcaaatccgaaaacatctgc 304779  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 9304173 - 9304118
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctgc 101  Q
    ||||||||| || ||||||||||||||| | ||||||||||||  |||||||||||    
T  9304173 attgcaaaagttttggtaaaacattatttcagattttcaaatcaagaaacatctgc 9304118  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 18584750 - 18584801
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacat 97  Q
    ||||||||| ||| ||||||| ||||||||| ||||||||||| ||||||||    
T  18584750 attgcaaaagttcaggtaaaatattattccgaattttcaaatccggaaacat 18584801  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 2539476 - 2539439
Alignment:
Q  162 taggacgtgcaaggaaagacatagggtggaaaaagtaa 199  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  2539476 tagggcgtgcgaggaaagacatagggtggaaaaagtaa 2539439  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 31721945 - 31721916
Alignment:
Q  170 gcaaggaaagacatagggtggaaaaagtaa 199  Q
    ||||||||||||||||||||||||||||||    
T  31721945 gcaaggaaagacatagggtggaaaaagtaa 31721916  T

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Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 17952 - 18006
Alignment:
Q  46 attgcaaaaattctggtaaaacattattccggattttcaaatctggaaacatctg 100  Q
    ||||||||| || ||||||||||||||||||| |||||||||| |||||||||||    
T  17952 attgcaaaacttttggtaaaacattattccgggttttcaaatccggaaacatctg 18006  T

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