View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10994_high_41 (Length: 290)
Name: NF10994_high_41
Description: NF10994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10994_high_41 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 39299656 - 39299905
Alignment:
| Q |
1 |
tcctgttcccattcctctgttcatttctttcacatgtggtgttccagaaaccactttggttcggctatcaagtttttctctatcatctgttaaacctttt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
39299656 |
tcctgttcccattcctctgttcatttctttcacatgtggtgttccagaaaccactttggttcggctatcaagtttttctctatcatcggttaaacctttt |
39299755 |
T |
|
| Q |
101 |
gattccatttgaaactttcccacatcacgaaaaccaccaaaatcttcttttccacctactctgtttcctgctacatttgcactatcacgaacatgtgcac |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
39299756 |
gattccatttgaaactttcccacatcacgaacaccaccaaaatcttct---------------tttcctgctacatttgcactatcacgaacatgtgcac |
39299840 |
T |
|
| Q |
201 |
gatcaaggtaactttgattctcgttacgatcaggaagagactgaaagtttgaaccaagttcatgg |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39299841 |
gatcaaggtaactttgattctcgttacgatcaggaagagactgaaagtttgaaccaagttcatgg |
39299905 |
T |
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