View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10994_high_56 (Length: 220)
Name: NF10994_high_56
Description: NF10994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10994_high_56 |
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Alignment Details
Target: chr2 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 32000941 - 32000810
Alignment:
| Q |
17 |
aaattttggggatctaatatagtcctatggtagatctcatagactaacctgctacaagtttcaatttgttgttacccatttgcaataaatatatgnnnnn |
116 |
Q |
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| T |
32000941 |
aaattttggggatctaatatagtcctatggtagatctcatagactaacctgctacaagtttcaatttgttgttacccatttgcaataaatatatg-tttt |
32000843 |
T |
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| Q |
117 |
nnacagttgtaaataattatagtaacattgagt |
149 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
32000842 |
ttacagttgtaaataattatagtaacattgagt |
32000810 |
T |
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