View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10994_low_10 (Length: 543)
Name: NF10994_low_10
Description: NF10994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10994_low_10 |
 | |
|
| [»] scaffold1643 (1 HSPs) |
| | |
|
| [»] scaffold0425 (3 HSPs) |
| | |
|
| [»] scaffold2053 (1 HSPs) |
| | |
|
| [»] scaffold0958 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold1643 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 18 - 533
Target Start/End: Complemental strand, 839 - 324
Alignment:
| Q |
18 |
ataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattggg |
117 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
839 |
ataaagatcattggtgaagagattcatggcagcaa---tttaacgcatgttccgttcttgtcccttgaagttttgaaatttgagaagttgaacaattggg |
743 |
T |
|
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaaggg---ctctgcctcaacaccttcctta |
214 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
742 |
aggaatggttgtgtcctgaagggtttcctttgcttaaagagcttactataagaaagtgtcccaaattagaaagggccactctgcctcaacaccttccttt |
643 |
T |
|
| Q |
215 |
tttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaatt |
314 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
642 |
tttacaaaaactgaatattactgattgcaacaagatggaggcatcaattcccaagagtgataatatgatagagttagatataaggagatgtgatagaatt |
543 |
T |
|
| Q |
315 |
ttggtaaatgaattgccgactggcctgaaaaagttactccttcagcga-aatcggtacacggagttctccgtggaccaaactttaatcaattttcccttt |
413 |
Q |
| |
|
||||||||||||||| |||| || |||||| |||| ||||| | || |||| |||||| ||||||||| | |||||| ||||||||||||||||||| |
|
|
| T |
542 |
ttggtaaatgaattgtcgaccagcttgaaaaggttattcctt-tgtgataatcagtacaccgagttctccccgcaccaaaatttaatcaattttcccttt |
444 |
T |
|
| Q |
414 |
cttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggc |
513 |
Q |
| |
|
|||||| ||||| |||||||||||| |||| ||| | ||||||| ||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
443 |
cttgaagagttgcaattggattttactggctttgtggaatgtccctctttggatctacattgctataattctctttggagactatcaataaaaggatggc |
344 |
T |
|
| Q |
514 |
actcctcctccttgcctttg |
533 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
343 |
actcctcctccttgcctttg |
324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 270; Significance: 1e-150; HSPs: 60)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 116 - 533
Target Start/End: Original strand, 6522944 - 6523361
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6522944 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6523043 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattt |
315 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
6523044 |
ttacaaaaactgaagattagtaattgcaacaagatggaggcatcaattcccaagtgtgataatatgatagagttagatatacagagttgtgatagaattt |
6523143 |
T |
|
| Q |
316 |
tggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttctccgtggaccaaactttaatcaattttccctttct |
415 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6523144 |
tggtaaatgaattgccgactagcctgaaaaagttactcctttggcaaaatcggaacacggagttctccgtggaccaaaatttaatcaattttccctttct |
6523243 |
T |
|
| Q |
416 |
tgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggcac |
515 |
Q |
| |
|
|||| | ||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| | || || |||||||| ||| | |
|
|
| T |
6523244 |
tgaagacttgaagttggatttcagaggctgtgtaaactgtccctctttggatttacgttgctataattttcttcgtgatctttcaataaaaggctggtgc |
6523343 |
T |
|
| Q |
516 |
tcctcctccttgcctttg |
533 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
6523344 |
tcctcctccttgcctttg |
6523361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 116 - 533
Target Start/End: Original strand, 6556176 - 6556593
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||| | || ||||||||||||||| | ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6556176 |
ggaggaattgttatgccttggagagtttcctttgcttaaagtgttttctataagaaattgtctcgaattgaaaagggctctgcctcaacaccttccttct |
6556275 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattt |
315 |
Q |
| |
|
|||||||||||| | | |||||||||| || |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6556276 |
ttacaaaaactgggtgtatttgattgcaacgagttggaggcatcaattcccaagagtgataatatgatagagttagatatacagaattgtgatagaattt |
6556375 |
T |
|
| Q |
316 |
tggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttctccgtggaccaaactttaatcaattttccctttct |
415 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
6556376 |
tggtaaatgaattgccgactagcctgaaaaagttactccttcggcgaaatcggtacacggagttctccgtgcaccaaaatttaatcaattttccctttct |
6556475 |
T |
|
| Q |
416 |
tgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggcac |
515 |
Q |
| |
|
|||| |||||| ||| ||| || |||| ||| || ||||| | ||||||||||||||||||||||| |||| | || || |||||||| ||| | |
|
|
| T |
6556476 |
tgaagcgttggagttgaattggagtggctctgtgaaatgtccttctttggatttacgttgctataattttcttcgtgatctttcaataaaaggctggtgc |
6556575 |
T |
|
| Q |
516 |
tcctcctccttgcctttg |
533 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
6556576 |
tcctcctccttgcctttg |
6556593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 59 - 532
Target Start/End: Complemental strand, 6945899 - 6945423
Alignment:
| Q |
59 |
aacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagag |
158 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| ||| | ||| |||||||||||||||||| |||| |||| |||||||||||||||||||| |
|
|
| T |
6945899 |
aacaaatgttccgttcaggtcccttgaagttttgaaattggagcatatggtcaattgggaggaatggttttgtcctgaaaggtttcctttgcttaaagag |
6945800 |
T |
|
| Q |
159 |
cttactataagaaattgtcccaaattgaaaagggc---tctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || | || ||| ||| || || |||||| |
|
|
| T |
6945799 |
cttactataagaaattgtcccaaattgaaaagggccttgctgcctcaacaccttccttctttacaaaaattgcaactttgtgtttgtaaacagttggagg |
6945700 |
T |
|
| Q |
256 |
catccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattttggtaaatgaattgccgactggcctgaaaaagttactcct |
355 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| |||| | || |
|
|
| T |
6945699 |
tatcagttcccaagagtgataatatgatagagttagatatacagagatgtgatagaattttggtaaatgaattgccgacaaatttgaaaaggttattact |
6945600 |
T |
|
| Q |
356 |
tcagcga-aatcggtacacggagttctccgtggaccaaactttaatcaattttccctttcttgaaaagttggaattggattttagaggctgtgtaaactg |
454 |
Q |
| |
|
| | || |||| |||||| ||||||||||||||||||| | |||||||| ||| |||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
6945599 |
t-tgtgataatcagtacaccgagttctccgtggaccaaaatctaatcaatattctctttcttgaaaagttgaggttggatttcagaggctgtgtaaactg |
6945501 |
T |
|
| Q |
455 |
tccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggcactcctcctccttgccttt |
532 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||| || || || |||||||||||||| ||||||||||||||||| |
|
|
| T |
6945500 |
tccctctttggatttacgttgctataattatcttgaaagactttcaataaaaggatggcattcctcctccttgccttt |
6945423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 116 - 533
Target Start/End: Original strand, 6841035 - 6841446
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6841035 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6841134 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattt |
315 |
Q |
| |
|
|||||||||||| | ||| | ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
6841135 |
ttacaaaaactgcagatttgggattgcaacaagatggaggcatcaattcccaagagtgataatatgatagagttagatatacagagatgtgatagaattt |
6841234 |
T |
|
| Q |
316 |
tggtaaatgaattgccgactggcctgaaaaagttactccttcagcga-aatcggtacacggagttctccgtggaccaaactttaatcaattttccctttc |
414 |
Q |
| |
|
||||||||||||||||||| || |||||| |||||||||| | || |||| ||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6841235 |
tggtaaatgaattgccgaccagcttgaaaaggttactcctt-tgtgataatcaatacacggagttctccgtggaccaaaatttaatcaattttccctttc |
6841333 |
T |
|
| Q |
415 |
ttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggca |
514 |
Q |
| |
|
||||| |||||||||||| | |||| ||| || ||||| | |||||||||| ||||||||||||||||| || || || ||| |||||||| |
|
|
| T |
6841334 |
ttgaagagttggaattggct------ggctctgtgaaatgtccttctttggatttaagttgctataattctcttcaaagactttcaatagaaggatgggg |
6841427 |
T |
|
| Q |
515 |
ctcctcctccttgcctttg |
533 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6841428 |
ctcctcctccttgcctttg |
6841446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 116 - 533
Target Start/End: Original strand, 6528475 - 6528892
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||||||| || |||| || ||||||||||||||||||| || |||||| || ||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6528475 |
ggaggaatggttatgccttggagagtttcctttgcttaaagagatttctataacaagttgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6528574 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattt |
315 |
Q |
| |
|
|||||||||||| | |||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
6528575 |
ttacaaaaactggagattattgattgcagcaagatggaggcaacaattcccaagtgtgataatatgatagagttagatatacagacatgtgatagaattt |
6528674 |
T |
|
| Q |
316 |
tggtaaatgaattgccgactggcctgaaaaagttactccttcagcga-aatcggtacacggagttctccgtggaccaaactttaatcaattttccctttc |
414 |
Q |
| |
|
||||||||||||| ||||| | |||||| |||| ||||| | || |||| |||||| ||||| ||| || | |||| | |||| ||||||||||||| |
|
|
| T |
6528675 |
tggtaaatgaatttccgacgagtttgaaaaggttattcctt-tgtgataatcagtacaccgagttatccatgcagcaaaatgtaataaattttccctttc |
6528773 |
T |
|
| Q |
415 |
ttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggca |
514 |
Q |
| |
|
||||| |||||| ||||||| || |||| ||| || ||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
6528774 |
ttgaagagttggggttggattggagtggctctgtgaaatgtccttctttggatttacgttgctataattctctttggagactatcaataaaaggatggca |
6528873 |
T |
|
| Q |
515 |
ctcctcctccttgcctttg |
533 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6528874 |
ctcctcctccttgcctttg |
6528892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 114 - 533
Target Start/End: Complemental strand, 7586444 - 7586025
Alignment:
| Q |
114 |
tgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttcctt |
213 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7586444 |
tgggaggaatggtcacatcttgaagggtttcctttgcttaaagagctttctataaaaaaatgtcccaagttgaaaagggctctgcctcaacaccttcctt |
7586345 |
T |
|
| Q |
214 |
atttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaat |
313 |
Q |
| |
|
|||||| |||||| | |||| |||||||| ||| |||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7586344 |
ctttacagaaactggagattaaagattgcaagaagttggaagcattaattccgaagtgtgataatatgatagagttagatataaagagatgtgatagaat |
7586245 |
T |
|
| Q |
314 |
tttggtaaatgaattgccgactggcctgaaaaagttactccttcagcga-aatcggtacacggagttctccgtggaccaaactttaatcaattttccctt |
412 |
Q |
| |
|
||||||||||||||||||||| |||||| ||| ||||| | || |||| |||||| ||||||||||||||||||| | |||||||| ||| ||| |
|
|
| T |
7586244 |
tttggtaaatgaattgccgacaaatttgaaaagtttattcctt-tgtgataatcagtacaccgagttctccgtggaccaaaatctaatcaatattctctt |
7586146 |
T |
|
| Q |
413 |
tcttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatgg |
512 |
Q |
| |
|
||||||| |||| | || ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| | || || |||||||||||| |
|
|
| T |
7586145 |
tcttgaagtgttgaagtttgatttcagaggctgtgtaaactgtccctctttggatttacgttgctataattctcttcgtgatctttcaataaaaggatgg |
7586046 |
T |
|
| Q |
513 |
cactcctcctccttgcctttg |
533 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
7586045 |
cactcctcctccttgcctttg |
7586025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 81 - 488
Target Start/End: Complemental strand, 8453241 - 8452834
Alignment:
| Q |
81 |
cttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtccca |
180 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| |
|
|
| T |
8453241 |
cttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttatataagagaatgtccca |
8453142 |
T |
|
| Q |
181 |
aattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatat |
280 |
Q |
| |
|
||||||||| | | ||||||||||||||||||| |||||||||| || |||| ||||||||| | | |||| ||||| |||||||| |||||||||| |
|
|
| T |
8453141 |
aattgaaaatgtccctgcctcaacaccttccttctttacaaaaattgttcattaatgattgcaagatgttggaagcatcaattcccaacggtgataatat |
8453042 |
T |
|
| Q |
281 |
gatagagttagatataaagaattgtgatagaattttggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttc |
380 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||| ||| ||||||||||||||| |
|
|
| T |
8453041 |
catagatttagatataaagagatgtgatagaattttggtaaatgaattgccgaccagcttgaaaaagttattcattcttgaaaaccggtacacggagttc |
8452942 |
T |
|
| Q |
381 |
tccgtggaccaaactttaatcaattttccctttcttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctata |
480 |
Q |
| |
|
||||| || || | ||| |||| | || |||||||| |||||| |||||||| | |||| | |||| |||||| ||||||||| ||||||||| |
|
|
| T |
8452941 |
tccgtagagcagattttcgtcaacagtaccattcttgaagtgttggagttggatttgaatggctctttaaaatgtcccactttggatttgtgttgctata |
8452842 |
T |
|
| Q |
481 |
attctctt |
488 |
Q |
| |
|
|||||||| |
|
|
| T |
8452841 |
attctctt |
8452834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 18 - 533
Target Start/End: Complemental strand, 8470226 - 8469714
Alignment:
| Q |
18 |
ataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattggg |
117 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
8470226 |
ataaagataattggtgaagagtttcatggcaacaa---ttcaacaaatgttccgttcttgtcccttgaagttttgaaatttgtgaagatgaacagttggg |
8470130 |
T |
|
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||| ||| || |||||||||||||||||| ||| |
|
|
| T |
8470129 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagctttctataaaaagctgtcccgaattgagaagcgcattgcctcaacaccttccttcttt |
8470030 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattttg |
317 |
Q |
| |
|
||||||| | | |||| ||| || | | | |||||||| ||||||||| |||||||||| |||||||||||| || ||| |||||| ||||| |
|
|
| T |
8470029 |
acaaaaattagagattattgactgtgaactgttagaggcatcgattcccaagggtgataatatcatagagttagatctacagagatgtgatcacatttta |
8469930 |
T |
|
| Q |
318 |
gtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttctccgtggaccaaactttaatcaattttccctttcttg |
417 |
Q |
| |
|
||||||||||||| || || |||||| ||| || ||| |||| ||| | | ||||||||||||| |||| ||||||||| | | |||||| |
|
|
| T |
8469929 |
ataaatgaattgccaaccagcttgaaaaggttcgtctttcgtgaaaattggttcgccaagttctccgtggagcaaattttaatcaacaatactattcttg |
8469830 |
T |
|
| Q |
418 |
aaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggcactc |
517 |
Q |
| |
|
|| ||||| | || ||||||| ||||| |||||| |||| || ||||||||| || ||||||| ||||||| | || || |||| |||||||||||| |
|
|
| T |
8469829 |
aagagttgaagtttgattttataggctctgtaaaatgtctctctttggatttgcgatgctatagttctcttcgtgatctttcaataacaggatggcactc |
8469730 |
T |
|
| Q |
518 |
ctcctccttgcctttg |
533 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8469729 |
ctcctccttgcctttg |
8469714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 195 - 532
Target Start/End: Complemental strand, 6942428 - 6942091
Alignment:
| Q |
195 |
ctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagata |
294 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6942428 |
ctgcctcaacaccttccttctttacaaaaactgaagattggttattgcaacaagatggaggcatcaattcccaagtgtgataatatgatagagttagata |
6942329 |
T |
|
| Q |
295 |
taaagaattgtgatagaattttggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttctccgtggaccaaac |
394 |
Q |
| |
|
|| ||| |||||||||||||||||||||||||||||||| || |||||| ||| ||||| |||| |||||| ||||||||| || |||||| |
|
|
| T |
6942328 |
tacagagatgtgatagaattttggtaaatgaattgccgaccagcttgaaaagtttattcctttgttataatcagtacaccgagttctccttgcaccaaaa |
6942229 |
T |
|
| Q |
395 |
tttaatcaattttccctttcttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagc |
494 |
Q |
| |
|
| ||||||||||||||||||| ||| |||||| |||||||||| |||| ||| | ||||| | |||||||||||||||||||||||| |||| | |
|
|
| T |
6942228 |
tgtaatcaattttccctttctcgaagagttggtgttggattttactggctttgtggaatgtccttctttggatttacgttgctataattccctttctaca |
6942129 |
T |
|
| Q |
495 |
ctatctataaaaggatggcactcctcctccttgccttt |
532 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||| |
|
|
| T |
6942128 |
ctttcaataaaaggatggcactcctcctccttgccttt |
6942091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 116 - 533
Target Start/End: Complemental strand, 6734245 - 6733828
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||||||| || |||| || |||||||||||||||||| || ||||| || ||| | ||||||||||||||||||| ||||||||||||| | |
|
|
| T |
6734245 |
ggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattcaaatgttctgaattgaaaagggctctgccacaacaccttccttct |
6734146 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattt |
315 |
Q |
| |
|
||||| |||||| | ||||| |||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
6734145 |
ttacagaaactggagattagagattgcaacaagttggaagcatcaattcctaagtgtgataatatgatagagttagatatacggagatgtgatagaattt |
6734046 |
T |
|
| Q |
316 |
tggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttctccgtgga-ccaaactttaatcaattttccctttc |
414 |
Q |
| |
|
|||||||||||||||| || | ||||||||||| ||||| ||||| |||||| |||||||| ||||| |||||| ||| |||| | | || ||| |
|
|
| T |
6734045 |
tggtaaatgaattgcctaccagtttgaaaaagttagtcctttctgaaaatcagtacaccgagttctctgtggagccaaac-ttagtcaactataccattc |
6733947 |
T |
|
| Q |
415 |
ttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggca |
514 |
Q |
| |
|
|||| ||||| | ||||||| || || | |||||| ||||| | ||||||||| |||| |||||||||||| | || || |||||||||||||| |
|
|
| T |
6733946 |
ttgacgagttgaatttggattggagtggttttgtaaagtgtccttctttggatttgtgttgttataattctcttggtgatctttcaataaaaggatggca |
6733847 |
T |
|
| Q |
515 |
ctcctcctccttgcctttg |
533 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6733846 |
ctcctcctccttgcctttg |
6733828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 116 - 533
Target Start/End: Original strand, 6781418 - 6781835
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||||||| || |||| || |||||||||||||||||| || ||||| || ||| | ||||||||||||||||||| ||||||||||||| | |
|
|
| T |
6781418 |
ggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattcaaatgttctgaattgaaaagggctctgccacaacaccttccttct |
6781517 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattt |
315 |
Q |
| |
|
||||| |||||| | ||||| |||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
6781518 |
ttacagaaactggagattagagattgcaacaagttggaagcatcaattcctaagtgtgataatatgatagagttagatatacggagatgtgatagaattt |
6781617 |
T |
|
| Q |
316 |
tggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttctccgtgga-ccaaactttaatcaattttccctttc |
414 |
Q |
| |
|
|||||||||||||||| || | ||||||||||| ||||| ||||| |||||| |||||||| ||||| |||||| ||| |||| | | || ||| |
|
|
| T |
6781618 |
tggtaaatgaattgcctaccagtttgaaaaagttagtcctttctgaaaatcagtacaccgagttctctgtggagccaaac-ttagtcaactataccattc |
6781716 |
T |
|
| Q |
415 |
ttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggca |
514 |
Q |
| |
|
|||| ||||| | ||||||| || || | |||||| ||||| | ||||||||| |||| |||||||||||| | || || |||||||||||||| |
|
|
| T |
6781717 |
ttgacgagttgaatttggattggagtggttttgtaaagtgtccttctttggatttgtgttgttataattctcttggtgatctttcaataaaaggatggca |
6781816 |
T |
|
| Q |
515 |
ctcctcctccttgcctttg |
533 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6781817 |
ctcctcctccttgcctttg |
6781835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 67 - 331
Target Start/End: Original strand, 8570364 - 8570628
Alignment:
| Q |
67 |
ttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactat |
166 |
Q |
| |
|
|||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||| |
|
|
| T |
8570364 |
ttccgttcaggtcccttgaagttttggaatttgcatggatgaacaattgggaggaatggttttgtattgaagggtttcctttgcttaaaaagctttctat |
8570463 |
T |
|
| Q |
167 |
aagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggaggcatccattccc |
266 |
Q |
| |
|
|||| |||||| || |||||||||||| ||||||| ||||||||||| ||||||||||||| | || ||||||||||| ||| ||||||| || |||||| |
|
|
| T |
8570464 |
aagatattgtcacagattgaaaagggccctgcctcgacaccttccttctttacaaaaactggagatcagtgattgcaagaagttggaggcttcaattccc |
8570563 |
T |
|
| Q |
267 |
aagtgtgataatatgatagagttagatataaagaattgtgatagaattttggtaaatgaattgcc |
331 |
Q |
| |
|
||| ||||||||| ||||||| || || | | |||||||| |||||||||||||||||||| |
|
|
| T |
8570564 |
aaggctgataatatcgaagagttatatctagatgaatgtgatagcattttggtaaatgaattgcc |
8570628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 81 - 449
Target Start/End: Original strand, 6730149 - 6730517
Alignment:
| Q |
81 |
cttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtccca |
180 |
Q |
| |
|
|||||||| |||||||||||| | || | ||||||||||||||||| | | |||||| ||||||| | |||||||||||| |||||||||||||||| |
|
|
| T |
6730149 |
cttgaagtattgaaatttgagcaattggagaattgggaggaatggttatttattgaagagtttcctctacttaaagagcttgaaataagaaattgtccca |
6730248 |
T |
|
| Q |
181 |
aattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatat |
280 |
Q |
| |
|
|| |||||||||| ||||||||||||||||||| |||| ||||| |||| ||| | |||||| || |||||||||| ||||||||| |||||||||| |
|
|
| T |
6730249 |
aactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagattgtttgttgcaaagagttggaggcatcaattcccaagggtgataatat |
6730348 |
T |
|
| Q |
281 |
gatagagttagatataaagaattgtgatagaattttggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttc |
380 |
Q |
| |
|
||||| ||| || || | ||||| || |||||||||||||||||||||||| || ||||||||||| ||||| | || |||||||| ||||| |
|
|
| T |
6730349 |
catagatttacatctagtgggatgtgaaagcattttggtaaatgaattgccgactagcttgaaaaagttagtcctttgggaaagtcggtacattaagttc |
6730448 |
T |
|
| Q |
381 |
tccgtggaccaaactttaatcaattttccctttcttgaaaagttggaattggattttagaggctgtgta |
449 |
Q |
| |
|
||| |||| |||||||| |||| | || ||||||| ||||||| || ||||||||||||| |||| |
|
|
| T |
6730449 |
tccttggagcaaacttttctcaacaataccaatcttgaagagttggagtttgattttagaggctttgta |
6730517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 6795978 - 6796181
Alignment:
| Q |
18 |
ataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattggg |
117 |
Q |
| |
|
|||| ||||||||||||||| ||| | |||||| | || |||||||||| ||||| ||||||||| ||||||||||||||| ||||| ||||||||| |
|
|
| T |
6795978 |
ataatgatcattggtgaagaatttta---caacaatagttcaacaaatgtttcgttcaggtcccttgaggttttgaaatttgaggagatggacaattggg |
6796074 |
T |
|
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||| | ||||||||||||||| ||||||| ||||||||| ||| |
|
|
| T |
6796075 |
aggaatggttttgtcttgaagggtttcctttgcttaaagagctttatataacaagttgtcacgaattgaaaagggctcagcctcaaaaccttccttcttt |
6796174 |
T |
|
| Q |
218 |
acaaaaa |
224 |
Q |
| |
|
||||||| |
|
|
| T |
6796175 |
acaaaaa |
6796181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 81 - 356
Target Start/End: Original strand, 6450221 - 6450496
Alignment:
| Q |
81 |
cttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtccca |
180 |
Q |
| |
|
|||||||| |||||||||||| || || | ||||||||||||||||| | | |||||| ||||||| | |||||||||||| |||||||||||||||| |
|
|
| T |
6450221 |
cttgaagtattgaaatttgagcagttggagaattgggaggaatggttatttattgaagagtttcctctacttaaagagcttgaaataagaaattgtccca |
6450320 |
T |
|
| Q |
181 |
aattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatat |
280 |
Q |
| |
|
|| |||||||||| ||||||||||||||||||| |||| ||||| |||| ||| | |||||| || |||||||||| ||||||||| |||||||||| |
|
|
| T |
6450321 |
aactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagattgtttgttgcaatgagttggaggcatcaattcccaagggtgataatat |
6450420 |
T |
|
| Q |
281 |
gatagagttagatataaagaattgtgatagaattttggtaaatgaattgccgactggcctgaaaaagttactcctt |
356 |
Q |
| |
|
||||| ||| || || | | ||| || |||||||||||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
6450421 |
catagatttacatctagtgggatatgaaagcattttggtaaatgaattgccgactagcttgaaaaagttagtcctt |
6450496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 81 - 255
Target Start/End: Original strand, 6840319 - 6840496
Alignment:
| Q |
81 |
cttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtccca |
180 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || || |||||||||| ||||||| |
|
|
| T |
6840319 |
cttgaagttttgaaatttgagaagatgaacaattgggagaaatggttttgtcttgaagggtttcctttgcttaaaaagatttctataagaaaatgtccca |
6840418 |
T |
|
| Q |
181 |
aattgaaaagggc---tctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
||||||||| ||| |||||| |||||||| ||| ||||||||| ||| | |||||| ||||||||||| |||||| |
|
|
| T |
6840419 |
aattgaaaaaggcagtgctgcctaaacaccttacttctttacaaaagctggagattagttattgcaacaagttggagg |
6840496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 81 - 527
Target Start/End: Original strand, 6481409 - 6481855
Alignment:
| Q |
81 |
cttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtccca |
180 |
Q |
| |
|
|||||||||||| ||||| || |||| | |||| |||||||||||| |||| ||||||||||| | |||||||||||||||||||| | ||||||||| |
|
|
| T |
6481409 |
cttgaagttttggaatttcagcggatggaaaatttggaggaatggttatgtcatgaagggtttctgtcgcttaaagagcttactataaaagattgtccca |
6481508 |
T |
|
| Q |
181 |
aattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatat |
280 |
Q |
| |
|
||||||||||||| || |||||||||||||||| |||||| ||| || |||| | ||||||||||| ||||||| || || || || |||||||||| |
|
|
| T |
6481509 |
aattgaaaagggcccttcctcaacaccttccttctttacagaaattgtcgattattaattgcaacaagttggaggcttcaatgcctgagggtgataatat |
6481608 |
T |
|
| Q |
281 |
gatagagttagatataaagaattgtgatagaattttggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttc |
380 |
Q |
| |
|
|||||||| | | ||| ||||| || |||||| |||| ||||||||||| || ||||||||||| ||||| ||||||| |||| |||||| |
|
|
| T |
6481609 |
cttagagttatgtctgaagggatgtgacagcattttgataaaggaattgccgaccagcttgaaaaagttagtcctttgtgaaaatcggcacaccgagttc |
6481708 |
T |
|
| Q |
381 |
tccgtggaccaaactttaatcaattttccctttcttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctata |
480 |
Q |
| |
|
| |||||| || | |||| ||| | ||| ||||| | || || |||||||| || |||| ||| | ||||||| ||||||||| ||||| |||| |
|
|
| T |
6481709 |
ttcgtggagcatattttaggcaacaatgcctatcttgcagagctgtgcttggatttgagtggctttgttgagtgtccctctttggatttgcgttgttata |
6481808 |
T |
|
| Q |
481 |
attctctttggagcctatctataaaaggatggcactcctcctccttg |
527 |
Q |
| |
|
|||||||| | | || || |||| ||| |||| ||||||||||||| |
|
|
| T |
6481809 |
attctcttcgtacgctttcaataatagggtggcgctcctcctccttg |
6481855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 6840627 - 6840769
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggc---tctgcctcaacaccttcct |
212 |
Q |
| |
|
|||| ||||||| |||||||||||| ||||||||||||||||| || ||||||||||||| |||||||| |||||||| || ||||||||||||||| |
|
|
| T |
6840627 |
ggagaaatggttttgtcttgaagggattcctttgcttaaagagatttctataagaaattgccccaaattaaaaagggccttgctacctcaacaccttcct |
6840726 |
T |
|
| Q |
213 |
tatttacaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
| ||||||||||||||| ||| |||||||||||||| |||||| |
|
|
| T |
6840727 |
tctttacaaaaactgaagatttgtgattgcaacaagttggagg |
6840769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 6521864 - 6521975
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6521864 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6521963 |
T |
|
| Q |
216 |
ttacaaaaactg |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6521964 |
ttacaaaaactg |
6521975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 6521999 - 6522138
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||||||| | |
|
|
| T |
6521999 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttct |
6522098 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
|||||||||||| | ||| | ||||||||||| |||||| |
|
|
| T |
6522099 |
ttacaaaaactggagattcggaattgcaacaagttggagg |
6522138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 6522269 - 6522380
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6522269 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6522368 |
T |
|
| Q |
216 |
ttacaaaaactg |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6522369 |
ttacaaaaactg |
6522380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 6522809 - 6522920
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6522809 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6522908 |
T |
|
| Q |
216 |
ttacaaaaactg |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6522909 |
ttacaaaaactg |
6522920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 6840900 - 6841039
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6840900 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6840999 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
|||||||| || | ||| | |||||||||||| |||||| |
|
|
| T |
6841000 |
ttacaaaatctagagatttgggattgcaacaagttggagg |
6841039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 6522134 - 6522273
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||||||| | |
|
|
| T |
6522134 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttct |
6522233 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
|||||||| ||| | ||| | ||||||||||| |||||| |
|
|
| T |
6522234 |
ttacaaaatctggagattcggaattgcaacaagttggagg |
6522273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 6522539 - 6522650
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6522539 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataacaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6522638 |
T |
|
| Q |
216 |
ttacaaaaactg |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6522639 |
ttacaaaaactg |
6522650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 77 - 288
Target Start/End: Complemental strand, 6932205 - 6931994
Alignment:
| Q |
77 |
gtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctt-actataagaaattg |
175 |
Q |
| |
|
||||||||||||||||| |||||| ||||| | || |||||||||||| |||||||| |||||||||||||||| ||||||| ||| |||| || |
|
|
| T |
6932205 |
gtcccttgaagttttgatatttgactagatgcattgtttggaggaatggttatgtcttgatgggtttcctttgcttagagagctttactc-aagaggatg |
6932107 |
T |
|
| Q |
176 |
tcccaaattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgat |
275 |
Q |
| |
|
| | |||||||||||||||| |||||||||||||||| ||||||||||||| | |||||||||||| ||||| | ||||| || ||||| |||| | || |
|
|
| T |
6932106 |
gctcgaattgaaaagggctcttcctcaacaccttccttctttacaaaaactggagattagtgattgccacaagtttgaggcttcaattcctaagtttcat |
6932007 |
T |
|
| Q |
276 |
aatatgatagagt |
288 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
6932006 |
aataccatagagt |
6931994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 6734616 - 6734396
Alignment:
| Q |
18 |
ataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattggg |
117 |
Q |
| |
|
||||||||||||| |||||||||| ||||||| || || ||||| |||||| ||| |||||||||| ||||| ||||||| | ||| ||| |||| |
|
|
| T |
6734616 |
ataaagatcattgatgaagagttttatggcaataa---ttcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactggg |
6734520 |
T |
|
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||| | ||| | | ||||||||||||||| ||||||| |||||| ||||||||| ||| ||||| | | ||||||||||| ||||||| ||| |
|
|
| T |
6734519 |
aggaatggatatgtgt---aaggtttcctttgcttatagagctttctataacaaattgtcctaaactgaaaggcaccctgcctcaacatcttccttcttt |
6734423 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaa |
244 |
Q |
| |
|
||||||| |||||||||||| |||||| |
|
|
| T |
6734422 |
acaaaaattgaatattagtggttgcaa |
6734396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 6556041 - 6556152
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
||||||||| || || |||| || ||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||||||||||||| | |
|
|
| T |
6556041 |
ggaggaatgtttatgccttggagagtttcctttgcttaaagagtttttaataagaaattgtcccgaattgaaaagggctcttcctcaacaccttccttct |
6556140 |
T |
|
| Q |
216 |
ttacaaaaactg |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6556141 |
ttacaaaaactg |
6556152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 118 - 280
Target Start/End: Original strand, 6592810 - 6592972
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||||| |||||||| ||||| | |||||||||| |||||||| || ||||||||||||||||||| ||| |
|
|
| T |
6592810 |
aggaatggttatgtcttgaaggtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagagccctgcctcaacaccttccttcttt |
6592909 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatat |
280 |
Q |
| |
|
|||||| || | |||| ||||||| | || ||||||| || ||||||||| ||||||||| |
|
|
| T |
6592910 |
gcaaaaattggagattactgattgccaagagttggaggcttcaattcccaaggctgataatat |
6592972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 59 - 224
Target Start/End: Complemental strand, 8588440 - 8588275
Alignment:
| Q |
59 |
aacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagag |
158 |
Q |
| |
|
||||| |||||| ||| ||| |||||||||||| ||||| | |||| ||||||||||||||||| | || ||| |||||||||||||||||||| || |
|
|
| T |
8588440 |
aacaattgttccattcaggtctcttgaagttttggaatttaaacggatggacaattgggaggaatggatatgccttcaagggtttcctttgcttaaaaag |
8588341 |
T |
|
| Q |
159 |
cttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttatttacaaaaa |
224 |
Q |
| |
|
|| |||||| | ||||| |||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
8588340 |
ctatttataagtgaatgtcctgaattgaaaagggctttgcctcaacaccttccttctttacaaaaa |
8588275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 6840765 - 6840904
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
6840765 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
6840864 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
|||||||| || | ||| | |||||||||||| |||||| |
|
|
| T |
6840865 |
ttacaaaatctagagatttgggattgcaacaagttggagg |
6840904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 6528248 - 6528448
Alignment:
| Q |
18 |
ataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattggg |
117 |
Q |
| |
|
||||||||||||| |||||| ||| ||| |||| |||| ||||| |||||| ||| ||||||| || ||| || ||||||||| ||| || |||| |
|
|
| T |
6528248 |
ataaagatcattgatgaagatttttatg---acaataattcaacaattgttccattcaagtcccttcaattttcgatatttgagaatatggtgaactggg |
6528344 |
T |
|
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|| ||||| | ||||| | ||||||||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||||| ||||||| ||| |
|
|
| T |
6528345 |
agaaatggatatgtct---aaggtttcctttgcttaaagagctttctataagaaattgtcctaaattgaaaagcaccttgcctcaacagcttccttcttt |
6528441 |
T |
|
| Q |
218 |
acaaaaa |
224 |
Q |
| |
|
||||||| |
|
|
| T |
6528442 |
acaaaaa |
6528448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 6521502 - 6521733
Alignment:
| Q |
18 |
ataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattggg |
117 |
Q |
| |
|
||||||||||||| |||||| ||| ||||||| || || ||||| |||||| ||| ||||||| || ||||| |||| || | ||| ||| |||| |
|
|
| T |
6521502 |
ataaagatcattgatgaagatttttatggcaataa---ttcaacaattgttccattcaagtcccttcaatatttgagatttcaggatatggtcaactggg |
6521598 |
T |
|
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||| | ||| | | |||||||| |||||||||||||| ||||| ||||||||| ||||||||||| | ||||||||||||||| ||| ||| |
|
|
| T |
6521599 |
aggaatggatatgtgt---aaggtttcctctgcttaaagagctttatataaaaaattgtcctaaattgaaaagcaccctgcctcaacacctttcttcttt |
6521695 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
||||||| |||| || |||||||||||| || |||||| |
|
|
| T |
6521696 |
acaaaaattgaagatcagtgattgcaacgagttggagg |
6521733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 6521729 - 6521868
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || ||||| ||||||| |||||||||||||||||| |||||||||||||| | |
|
|
| T |
6521729 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccttttgtcccgaattgaaaagggctctgcatcaacaccttccttct |
6521828 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
|||||||||||| | ||| | ||||||||||| |||||| |
|
|
| T |
6521829 |
ttacaaaaactggagattcggaattgcaacaagttggagg |
6521868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 6840492 - 6840603
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| || |||| |||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
6840492 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagatttatatattcgattgtcccaaattgaaaagggctctgccacaacaccttccttct |
6840591 |
T |
|
| Q |
216 |
ttacaaaaactg |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6840592 |
ttacaaaaactg |
6840603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 6522406 - 6522543
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||| ||| || |||| || ||||||||||||||||||| || ||||| ||||||| |||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
6522406 |
aggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccttttgtcccgaattgaaaagggctctgcatcaacaccttccttcttt |
6522505 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
|||||||||| | ||| | ||||||||||| |||||| |
|
|
| T |
6522506 |
acaaaaactggagattcggaattgcaacaagttggagg |
6522543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 6522676 - 6522813
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||| ||| || |||| || ||||||||||||||||||| || ||||| ||||||| |||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
6522676 |
aggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccttttgtcccgaattgaaaagggctctgcatcaacaccttccttcttt |
6522775 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggagg |
255 |
Q |
| |
|
|||||||||| | ||| | ||||||||||| |||||| |
|
|
| T |
6522776 |
acaaaaactggagattcggaattgcaacaagttggagg |
6522813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 6781162 - 6781267
Alignment:
| Q |
139 |
ggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaatattagtga |
238 |
Q |
| |
|
||||||||||||||| ||||||| |||||| ||||||||| ||| ||||| | | ||||||||||| ||||||| |||||||||| |||||||||||| |
|
|
| T |
6781162 |
ggtttcctttgcttatagagctttctataacaaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtgg |
6781261 |
T |
|
| Q |
239 |
ttgcaa |
244 |
Q |
| |
|
|||||| |
|
|
| T |
6781262 |
ttgcaa |
6781267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 198 - 349
Target Start/End: Original strand, 6796293 - 6796444
Alignment:
| Q |
198 |
cctcaacaccttccttatttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataa |
297 |
Q |
| |
|
|||||||||||||||| |||||| ||| |||| ||| |||||||| || || |||| ||||| ||||| ||| |||||| ||| || ||||| ||||| |
|
|
| T |
6796293 |
cctcaacaccttccttctttacagaaaatgaagattggtgattgctacgagttggaagcatcaattccaaagggtgatagtatcgtacagttatatatac |
6796392 |
T |
|
| Q |
298 |
agaattgtgatagaattttggtaaatgaattgccgactggcctgaaaaagtt |
349 |
Q |
| |
|
||| ||||| || ||||||||||||||||||||| || || |||||||||| |
|
|
| T |
6796393 |
agagttgtggtaaaattttggtaaatgaattgccaacaagcttgaaaaagtt |
6796444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 118 - 280
Target Start/End: Original strand, 6723536 - 6723698
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| ||||||||||| || |||||||| |||||||| ||||| | |||||||||| |||||||| | ||||||||||||||||||| || |
|
|
| T |
6723536 |
aggaatggttatgtcttgaaggtttccctttgctacaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaacaccttccttcatt |
6723635 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatat |
280 |
Q |
| |
|
|||||| || | |||| ||||||| | || ||||||| || ||||||||| ||||||||| |
|
|
| T |
6723636 |
gcaaaaattggagattattgattgccaagagctggaggcttcaattcccaaggctgataatat |
6723698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 331
Target Start/End: Complemental strand, 6898660 - 6898447
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| ||||||||| | |||| ||||||| |||||||| ||| | | ||||||| || |||||||| | ||||||||||||||||||| ||| |
|
|
| T |
6898660 |
aggaatggttatgtcttgaatgttttcatttgcttcaagagctttgtatcaaacattgtccgaagttgaaaagttccctgcctcaacaccttccttcttt |
6898561 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattttg |
317 |
Q |
| |
|
||||| |||| |||| ||||||| | || || |||| || ||||||||| ||||||||| | ||| |||| |||||| |||||| | |||||| |
|
|
| T |
6898560 |
gcaaaagttgaaaattattgattgccaagagttgcaggcttcaattcccaaggctgataatatcagtgagctagaactaaagagatgtgatggcattttg |
6898461 |
T |
|
| Q |
318 |
gtaaatgaattgcc |
331 |
Q |
| |
|
||||||||||||| |
|
|
| T |
6898460 |
ataaatgaattgcc |
6898447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 6915673 - 6915549
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| ||||||||| | || ||||||||| |||||||| ||||| | |||||||||| |||||||| | ||||||||||||||||||| ||| |
|
|
| T |
6915673 |
aggaatggttatgtcttgaatgtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaacaccttccttcttt |
6915574 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgc |
242 |
Q |
| |
|
|||||| || | |||| ||||||| |
|
|
| T |
6915573 |
gcaaaaattggagattattgattgc |
6915549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 122 - 331
Target Start/End: Complemental strand, 6236293 - 6236084
Alignment:
| Q |
122 |
atggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttatttacaa |
221 |
Q |
| |
|
|||||| |||| || ||| || ||||| |||||||||||| ||||| | |||||||||| |||||||| | ||||||||| ||||||||| ||| ||| |
|
|
| T |
6236293 |
atggttatgtcgtggaggtttcccttttcttaaagagctttgtataaaacattgtcccaagttgaaaagtgacctgcctcaataccttccttgtttgcaa |
6236194 |
T |
|
| Q |
222 |
aaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattttggtaa |
321 |
Q |
| |
|
||| || | |||| ||||||| | || ||||||| || ||||||||| || |||||| | ||| |||| |||||| |||||| | |||||| ||| |
|
|
| T |
6236193 |
aaattggagattattgattgccaagagttggaggcgtcaattcccaaggctggtaatatcagtgagctagaactaaagagatgtgatggcattttgataa |
6236094 |
T |
|
| Q |
322 |
atgaattgcc |
331 |
Q |
| |
|
|||||||||| |
|
|
| T |
6236093 |
atgaattgcc |
6236084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 6555814 - 6556013
Alignment:
| Q |
18 |
ataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattggg |
117 |
Q |
| |
|
||||||||||||| |||||||||| ||||||| || || ||||| |||||| ||| |||||||||| ||||| ||||||| | ||| ||| |||| |
|
|
| T |
6555814 |
ataaagatcattgatgaagagttttatggcaataa---ttcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactggg |
6555910 |
T |
|
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||| | ||| | | |||||||| |||||||||||||| |||| ||||||||| ||||||||||| | |||||||||| ||||| | ||| |
|
|
| T |
6555911 |
aggaatggatatgtgt---aaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagagtattgcctcaacatcttccatcttt |
6556007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 331
Target Start/End: Complemental strand, 6881088 - 6880875
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||||| || ||||| ||||| | |||||||||| |||||||| || || ||||||||||| |||| ||| |
|
|
| T |
6881088 |
aggaatggttatgtcttgaaggtttccctttgcttcaaaagctttgtataaaacattgtcccaagttgaaaagtgcccttcctcaacacctcccttcttt |
6880989 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattttg |
317 |
Q |
| |
|
|||||| || | |||| ||||||| | || ||| ||| || ||||||||| || |||||| | ||| |||| |||||| |||||| |||||| |
|
|
| T |
6880988 |
gcaaaaattggagattattgattgccaagagttggcggcttcaattcccaaggctgctaatatcactgagctagaactaaagagatgtgatgacattttg |
6880889 |
T |
|
| Q |
318 |
gtaaatgaattgcc |
331 |
Q |
| |
|
||||||||||||| |
|
|
| T |
6880888 |
ataaatgaattgcc |
6880875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 4390336 - 4390442
Alignment:
| Q |
80 |
ccttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtccc |
179 |
Q |
| |
|
||||||| ||||| ||||||| | ||| ||||||| |||||||||| ||| ||||||| || |||||||||||||||||| ||||| | |||||||| |
|
|
| T |
4390336 |
ccttgaaattttgcgatttgaggacatgtccaattggaaggaatggttatgtgttgaaggtttccctttgcttaaagagctttctatacgtaattgtcca |
4390435 |
T |
|
| Q |
180 |
aaattga |
186 |
Q |
| |
|
||||||| |
|
|
| T |
4390436 |
aaattga |
4390442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 280
Target Start/End: Complemental strand, 7748574 - 7748412
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| ||||||||| | || ||||||||| ||||||| ||||| | ||||||| || |||||||| | ||||||||||||||||||| ||| |
|
|
| T |
7748574 |
aggaatggttatgtcttgaatgtttccctttgcttcgagagctttgtataaaacattgtccgaagttgaaaagttccctgcctcaacaccttccttcttt |
7748475 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatat |
280 |
Q |
| |
|
|||||| || | |||| ||||||| | || || |||| || ||||||||| ||||||||| |
|
|
| T |
7748474 |
gcaaaaattggagattattgattgccaagagttgcaggcttcaattcccaaggctgataatat |
7748412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 533
Target Start/End: Complemental strand, 8588214 - 8588077
Alignment:
| Q |
396 |
ttaatcaattttccctttcttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcc |
495 |
Q |
| |
|
|||||||||||| | ||||||||| ||||| | |||||||||| |||| || | ||||||| ||||||| | |||||| |||||||||| ||| | |
|
|
| T |
8588214 |
ttaatcaattttacatttcttgaagagttgtatttggattttactggcttagtggagtgtccctctttggatctgcgttgccataattctctccggaaac |
8588115 |
T |
|
| Q |
496 |
tatctataaaaggatggcactcctcctccttgcctttg |
533 |
Q |
| |
|
| || ||||||||||||| ||||| ||||||||||||| |
|
|
| T |
8588114 |
tttcaataaaaggatggcgctcctactccttgcctttg |
8588077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 269
Target Start/End: Complemental strand, 6167469 - 6167318
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| || |||||||| || ||||||||| |||||||| | ||| | | |||||||| |||||||| ||||||||||| || ||||||| ||| |
|
|
| T |
6167469 |
aggaatggttatgccttgaaggtttccctttgcttcaagagctttgtctaaaacaatgtcccaagttgaaaagtgctctgcctcatcatcttccttgttt |
6167370 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaag |
269 |
Q |
| |
|
||||| || | |||| ||||||| | || ||||||| || ||||||||| |
|
|
| T |
6167369 |
gcaaaagttggaaattattgattgcgaagagttggaggcttcaattcccaag |
6167318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 5248771 - 5248682
Alignment:
| Q |
96 |
tttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattg |
185 |
Q |
| |
|
|||||||| ||| ||||||| || ||||||| ||| |||| | || |||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
5248771 |
tttgagaacatgtccaattggaagaaatggttatgtgttgagtgtttccctttgcttaaacagctttctataagaaattgtcccaaattg |
5248682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 331
Target Start/End: Complemental strand, 6140858 - 6140645
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| || |||||||| || ||||||||| |||||||| | ||| | | |||||||| |||||||| || |||||||| || ||||||| ||| |
|
|
| T |
6140858 |
aggaatggttatgccttgaaggtttccctttgcttcaagagctttgtctaaaacaatgtcccaagttgaaaagtgccctgcctcatcatcttccttgttt |
6140759 |
T |
|
| Q |
218 |
acaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattttg |
317 |
Q |
| |
|
||||| || | |||| ||||||| | || ||||||| || ||||||||| || |||||| | || |||| |||||| |||||| | |||||| |
|
|
| T |
6140758 |
gcaaaagttggagattattgattgcgaagagttggaggcttcaattcccaaggctgctaatatcagtgatatagaactaaagagatgtgatggcattttg |
6140659 |
T |
|
| Q |
318 |
gtaaatgaattgcc |
331 |
Q |
| |
|
||||||||||||| |
|
|
| T |
6140658 |
ataaatgaattgcc |
6140645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 13272010 - 13272115
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||||| ||||||||||| || || |||||| |||||||| ||||| |||||||||| ||||| || ||||||||||| ||| |||||| ||| |
|
|
| T |
13272010 |
aggaatggttatgtcttgaaggtttcccattgcttcaagagctttgtataacgcattgtcccaagttgaagagtgctctgcctcagcacgttccttgttt |
13272109 |
T |
|
| Q |
218 |
acaaaa |
223 |
Q |
| |
|
||||| |
|
|
| T |
13272110 |
gcaaaa |
13272115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 280
Target Start/End: Complemental strand, 5297291 - 5297155
Alignment:
| Q |
144 |
cctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaatattagtgattgca |
243 |
Q |
| |
|
|||||||| |||||||| | |||||| | || || || ||||||||| ||||||||||| ||||||| ||| |||||| |||| |||||||||||| |
|
|
| T |
5297291 |
cctttgctgaaagagctgtcaataagatactgccctaagttgaaaaggaaactgcctcaacatcttccttctttgcaaaaattgaagattagtgattgcc |
5297192 |
T |
|
| Q |
244 |
acaagatggaggcatccattcccaagtgtgataatat |
280 |
Q |
| |
|
| || ||||||| || ||||||||| ||||||||| |
|
|
| T |
5297191 |
aagagttggaggcttcgattcccaaggctgataatat |
5297155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 6486418 - 6486502
Alignment:
| Q |
77 |
gtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctt |
161 |
Q |
| |
|
||||||||||||||||| |||||| ||||| | || |||||| ||||| |||||||| |||||||||||||| ||||||||| |
|
|
| T |
6486418 |
gtcccttgaagttttgatatttgactagatgcattgtttggaggactggttatgtcttgatgggtttcctttgctgaaagagctt |
6486502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 6243884 - 6243794
Alignment:
| Q |
123 |
tggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttcctt |
213 |
Q |
| |
|
||||| ||| ||||||| || |||||||| ||||||||| | |||||| | |||||||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
6243884 |
tggttatgtattgaaggtttccctttgctgaaagagctttcaataagatactgtcccaagttgaaaaggaaactgcctcaacatcttcctt |
6243794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 6734389 - 6734315
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaag |
190 |
Q |
| |
|
|||||||||||| |||||||||||||||| || |||||||||||| |||||| ||||| ||||||| ||||| |
|
|
| T |
6734389 |
ggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtcattgttccaaattcaaaag |
6734315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 6781274 - 6781348
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaag |
190 |
Q |
| |
|
|||||||||||| |||||||||||||||| || |||||||||||| |||||| ||||| ||||||| ||||| |
|
|
| T |
6781274 |
ggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtcattgttccaaattcaaaag |
6781348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 5266656 - 5266545
Alignment:
| Q |
113 |
ttgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttcct |
212 |
Q |
| |
|
|||| |||||||||| ||| ||||| | || ||||||||| |||||||| |||| || ||||| ||||||||||| ||| ||||||||||||||| |
|
|
| T |
5266656 |
ttggaaggaatggttatgtgttgaaagtttccctttgcttgaagagctttttatagaaagttgtcacaaattgaaaaaatatctacctcaacaccttcct |
5266557 |
T |
|
| Q |
213 |
tatttacaaaaa |
224 |
Q |
| |
|
| ||| |||||| |
|
|
| T |
5266556 |
tctttgcaaaaa |
5266545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 6850749 - 6850859
Alignment:
| Q |
132 |
cttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttatttacaaaaactgaata |
231 |
Q |
| |
|
|||||||| || ||||| ||| |||||||| ||||| | ||||||| || |||||||| || |||||||||||||| |||| || |||||| || | | |
|
|
| T |
6850749 |
cttgaaggtttccctttacttcaagagctttgtataaaacattgtccgaagttgaaaagtgccctgcctcaacacctcccttcttagcaaaaattggaga |
6850848 |
T |
|
| Q |
232 |
ttagtgattgc |
242 |
Q |
| |
|
||| ||||||| |
|
|
| T |
6850849 |
ttattgattgc |
6850859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 6264254 - 6264182
Alignment:
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaag |
190 |
Q |
| |
|
|||||||||| |||||||| || || ||||| ||||||||||| || ||| ||||||||||||||||||| |
|
|
| T |
6264254 |
aggaatggttatgtcttgatggtttccctttagttaaagagctttctctaaatcattgtcccaaattgaaaag |
6264182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 218; Significance: 1e-119; HSPs: 3)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 116 - 533
Target Start/End: Original strand, 9224 - 9641
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||||||| || |||| || ||||||||||||||| ||| || ||||| ||||||||| ||||||||||||||||||| ||||||||||||| | |
|
|
| T |
9224 |
ggaggaatggttatgccttggagagtttcctttgcttaacgagttttctatatccaattgtcccgaattgaaaagggctctgccacaacaccttccttct |
9323 |
T |
|
| Q |
216 |
ttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaattt |
315 |
Q |
| |
|
||||||||| || |||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||||| |
|
|
| T |
9324 |
ttacaaaaattgttcattaatgattgcaacaagttggaagcatcaattcccaagtgtgataatatgatagagttagatatacaaagttgtgatagaattt |
9423 |
T |
|
| Q |
316 |
tggtaaatgaattgccgactggcctgaaaaagttactccttcagcgaaatcggtacacggagttctccgtggaccaaactttaatcaattttccctttct |
415 |
Q |
| |
|
||||||||||||||||||| || |||||| ||||||||| || |||||||||||| |||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
9424 |
tggtaaatgaattgccgaccagcttgaaaagtttactcctttggcaaaatcggtacactgagttctctgtggaccaaaatttaatcaattttccctttct |
9523 |
T |
|
| Q |
416 |
tgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatggcac |
515 |
Q |
| |
|
|||| |||| |||||||||||| |||| ||| | ||||||| ||||||| ||||||||||||||||||||||||| ||||| ||| |||||||||| |
|
|
| T |
9524 |
tgaatcgttgcaattggattttactggctttgtggaatgtccctctttggatctacgttgctataattctctttggagactatcaatacaaggatggcat |
9623 |
T |
|
| Q |
516 |
tcctcctccttgcctttg |
533 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
9624 |
tcctcctccttgcctttg |
9641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 8862 - 9071
Alignment:
| Q |
18 |
ataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattggg |
117 |
Q |
| |
|
||||||||||||| |||||| ||| ||||||| || || ||||| |||||| ||| |||||||||| ||||| ||||| | | ||| ||| |||| |
|
|
| T |
8862 |
ataaagatcattgatgaagaattttatggcaataa---ttcaacaattgttccattcaagtcccttgaatatttgagatttgtggatatggtcaactggg |
8958 |
T |
|
| Q |
118 |
aggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttattt |
217 |
Q |
| |
|
|||||||| | ||| | | |||||||| |||||||||||||| |||| ||||||||| ||||||||||| | ||||||||||| ||||||| ||| |
|
|
| T |
8959 |
aggaatggatatgtgt---aaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccctgcctcaacatcttccttcttt |
9055 |
T |
|
| Q |
218 |
acaaaaactgaatatt |
233 |
Q |
| |
|
||||||| ||| |||| |
|
|
| T |
9056 |
acaaaaattgattatt |
9071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 9089 - 9192
Alignment:
| Q |
116 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttccttat |
215 |
Q |
| |
|
|||||||||||| |||||||||||||||| || |||||||||||| ||||| | ||||| | ||||| ||||||| |||||||||| ||||||| | |
|
|
| T |
9089 |
ggaggaatggttatgtcttgaagggtttctttctcttaaagagctttctatatggtattgttctaaattcaaaagggtattgcctcaacatcttccttct |
9188 |
T |
|
| Q |
216 |
ttac |
219 |
Q |
| |
|
|||| |
|
|
| T |
9189 |
ttac |
9192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2053 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold2053
Description:
Target: scaffold2053; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 412 - 532
Target Start/End: Original strand, 13 - 133
Alignment:
| Q |
412 |
ttcttgaaaagttggaattggattttagaggctgtgtaaactgtccctttttggatttacgttgctataattctctttggagcctatctataaaaggatg |
511 |
Q |
| |
|
|||||||| ||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
13 |
ttcttgaagagttgaagttggatttcagaggctgtgtaaactgtccctctttggatttacgttgctataattctctttggagactatcaataaaaggatg |
112 |
T |
|
| Q |
512 |
gcactcctcctccttgccttt |
532 |
Q |
| |
|
|||||| ||||| |||||||| |
|
|
| T |
113 |
gcactcatcctcgttgccttt |
133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0958 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0958
Description:
Target: scaffold0958; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 114 - 328
Target Start/End: Original strand, 1249 - 1462
Alignment:
| Q |
114 |
tgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggctctgcctcaacaccttcctt |
213 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||| | ||| |||||||| |||||| || |||||||||||| || |||| ||||||||||| |
|
|
| T |
1249 |
tgggaagaatggtattgtcttgaagggtttcctttgcttaaaaatctttctataagatattgtcgcatattgaaaagggccctacctcgacaccttcctt |
1348 |
T |
|
| Q |
214 |
atttacaaaaactgaatattagtgattgcaacaagatggaggcatccattcccaagtgtgataatatgatagagttagatataaagaattgtgatagaat |
313 |
Q |
| |
|
|||||||| | || ||||||| || ||| |||| |||||| || ||||| ||| ||||||||| | |||| |||| |||| |||||||| || |
|
|
| T |
1349 |
ctttacaaatattggatattagcgagtgctgcaagttggaggtttcaattcctaaggctgataatatcagagagctaga-ctaaacggatgtgatagcat |
1447 |
T |
|
| Q |
314 |
tttggtaaatgaatt |
328 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
1448 |
tttggtaaatgaatt |
1462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 210
Target Start/End: Original strand, 6574734 - 6574878
Alignment:
| Q |
66 |
gttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagcttacta |
165 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||| ||| ||| | | ||| |||||||||| | |||||| ||||||| ||||| ||||||||| || |
|
|
| T |
6574734 |
gttccgttcaggtcccttgaatttttggaatttgggaatatgcccgaatggaaggaatggttttaacttgaacggtttcccttgctcaaagagctttata |
6574833 |
T |
|
| Q |
166 |
taagaaattgtcccaaattgaaaagggctctgcctcaacaccttc |
210 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
6574834 |
tagaccattgtcccaaattgaaaaggttcctgcctcaaaaccttc |
6574878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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