View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10994_low_13 (Length: 508)
Name: NF10994_low_13
Description: NF10994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10994_low_13 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 332; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 11 - 487
Target Start/End: Complemental strand, 29990996 - 29990520
Alignment:
| Q |
11 |
atggacatcagtaagagcagcttccccccaagcacgttatggacaagaagctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctc |
110 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||| ||||||||| || |||||||||||| ||||||||||||||||||||| | ||||||||||| |
|
|
| T |
29990996 |
atggacagcagtaagagcagcttcaccccaagcacgttctggacaagaggccgagataagcatgacacagactgagtcaagaatgtaatgatgctttctc |
29990897 |
T |
 |
| Q |
111 |
tcagcgcgacccttttgttgagatgtgtatggacaagaaaattcagaaaatgtaccctgctcactaagaaaagacaagagtttagaatcacgatattcca |
210 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29990896 |
tcagcgcgaccattttgttgagatgtgtatggacaagaaaattcagacaatgtaccatgctcactaagaaaagacaagagtttagaatcacgatattcca |
29990797 |
T |
 |
| Q |
211 |
tggcattatctcgttggaaaactttaattacttt-agaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagctcgtgtctannnn |
309 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
29990796 |
tggcattatctcgtcggaaaactttaatgactttaaaaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgaggaagctcatgtcta-ttt |
29990698 |
T |
 |
| Q |
310 |
nnnatcatatctatccatgtgaaatgagaataatcatcaataaagagaacaaaataccgagcacctcccatagtaggtgtgggagtaggaccccagatat |
409 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||| | |||||||||| || ||||| ||||||||||||||||| ||||||||| |||| |
|
|
| T |
29990697 |
ttcatcatatatatccatgtgaaacgagaataatcatcaataaatataacaaaatactgaaaacctctcatagtaggtgtgggaggaggaccccaaatat |
29990598 |
T |
 |
| Q |
410 |
cagaatgcactagatcaaacggtgaagctgaaatggatgtacttttatgaaaagataaagcaggttgtttaacacttt |
487 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
29990597 |
cagaatgcactagatcaaacggtgaagctgaaatggatgtacatttatgaaaagataaagcaggttgtttagcacttt |
29990520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 11 - 480
Target Start/End: Complemental strand, 16503035 - 16502567
Alignment:
| Q |
11 |
atggacatcagtaagagcagcttccccccaagcacgttatggacaagaagctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctc |
110 |
Q |
| |
|
||||||| | |||||||| ||||| |||||||| |||| || ||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16503035 |
atggacagcggtaagagcggcttcaccccaagcgcgttctgaacatgaggctgagatatgcatggcacagactgagtcaagaatgtaacgatgctttctc |
16502936 |
T |
 |
| Q |
111 |
tcagcgcgacccttttgttgagatgtgtatggacaagaaaattcagaaaatgtaccctgctcactaagaaaagacaagagtttagaatcacgatattcca |
210 |
Q |
| |
|
||||||||||| || ||||||||||| |||||||| ||||||||| | || |||||||| ||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
16502935 |
tcagcgcgaccattctgttgagatgtatatggacatgaaaattcaaacaaggtaccctgatcactaagaaatgtcaagagtttagaatcacgatattcca |
16502836 |
T |
 |
| Q |
211 |
tggcattatctcgttggaaaactttaattactttagaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagctcgtgtctannnnn |
310 |
Q |
| |
|
|| |||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
16502835 |
tgacattatctcgccgaaaaactttaatgactttagaaaattatgtttgaatcattttggcaaaattgatgtaaatttgaggaagctcatgtcta-tttt |
16502737 |
T |
 |
| Q |
311 |
nnatcatatctatccatgtgaaatgagaataatcatcaataaagagaacaaaataccgagcacctcccatagtaggtgtgggagtaggaccccagatatc |
410 |
Q |
| |
|
||||||| ||||||||| || ||||||||||||||||||| | ||||||||| | || ||||||||| ||||||||||||| | ||||||| ||||| |
|
|
| T |
16502736 |
tcatcatatatatccatgtaaagcgagaataatcatcaataaatataacaaaatatctagaacctcccatcgtaggtgtgggagcatgaccccaaatatc |
16502637 |
T |
 |
| Q |
411 |
agaatgcactagatcaaacggtgaagctgaaatggatgtacttttatgaaaagataaagcaggttgttta |
480 |
Q |
| |
|
||||||||| |||||||| |||||| |||||||||| |||||||||| ||||| || || ||||||||| |
|
|
| T |
16502636 |
agaatgcacaagatcaaatggtgaaactgaaatggaagtacttttattgaaagacaaggctggttgttta |
16502567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 12 - 480
Target Start/End: Complemental strand, 24432138 - 24431671
Alignment:
| Q |
12 |
tggacatcagtaagagcagcttccccccaagcacgttatggacaagaagctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctct |
111 |
Q |
| |
|
|||||| ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||| ||||||| |
|
|
| T |
24432138 |
tggacagcagtaagagaagcttcaccccaagcacgttcaggacaagaggctgagataagcatggcacggacaaagtcaagaatgtgacgatgttttctct |
24432039 |
T |
 |
| Q |
112 |
cagcgcgacccttttgttgagatgtgtatggacaagaaaattcagaaaatgtaccctgctcactaagaaaagacaagagtttagaatcacgatattccat |
211 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||||||||| |||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
24432038 |
cagcacgaccattttgttgagatgtatatggacaagagaattcagacaaggtaccctgctcaccaagaaaatctaagagtttagaatcacgatattccat |
24431939 |
T |
 |
| Q |
212 |
ggcattatctcgttggaaaactttaattactttagaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagctcgtgtctannnnnn |
311 |
Q |
| |
|
|||||||||||| | ||||||||||| | ||||||||||||||||||||||||||| ||||| || ||||||||||||| |||||| || | | |
|
|
| T |
24431938 |
ggcattatctcggcgaaaaactttaataattttagaaaattgtgtttgaatcatttttgcaaacttaatgtaaatttgaggaagctcatgacga-ttttt |
24431840 |
T |
 |
| Q |
312 |
natcatatctatccatgtgaaatgagaataatcatcaataaagagaacaaaataccgagcacctcccatagtaggtgtgggagtaggaccccagatatca |
411 |
Q |
| |
|
|||| | ||||||||| ||| ||||||||||||||||||| | |||||||||||||| ||||||||| ||||| ||||||| ||| ||||| |||||| |
|
|
| T |
24431839 |
catcaagtatatccatgtaaaacgagaataatcatcaataaacaaaacaaaataccgagaacctcccattgtaggagtgggagcaggtccccaaatatca |
24431740 |
T |
 |
| Q |
412 |
gaatgcactagatcaaacggtgaagctgaaatggatgtacttttatgaaaagataaagcaggttgttta |
480 |
Q |
| |
|
|| || || ||||||||||||||||||||||| |||||||||| ||| || ||||| ||||||||| |
|
|
| T |
24431739 |
gagtggacaagatcaaacggtgaagctgaaatattagtacttttattaaatgacaaagctggttgttta |
24431671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 21 - 454
Target Start/End: Original strand, 53017188 - 53017620
Alignment:
| Q |
21 |
gtaagagcagcttccccccaagcacgttatggacaagaagctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctctcagcgcgac |
120 |
Q |
| |
|
|||||||| ||||| ||||||| ||| |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
53017188 |
gtaagagcggcttcatcccaagcgtgttctggacacgaggctgagataagcatggcacggactgagtcaagaatgtgacgatgctttctctcagcacgac |
53017287 |
T |
 |
| Q |
121 |
ccttttgttgagatgtgtatggacaagaaaattcagaaaatgtaccctgctcactaagaaaagacaagagtttagaatcacgatattccatggcattatc |
220 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
53017288 |
cattttgttgagatgtgtatggacatgaaaattcagacaaggtaccctgctcactaagaaatgacaagagtttagaatcacgatatttcatggcattatc |
53017387 |
T |
 |
| Q |
221 |
tcgttggaaaactttaattactttagaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagctcgtgtctannnnnnnatcatatc |
320 |
Q |
| |
|
|| | || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |
|
|
| T |
53017388 |
tcaccgaaagactttaatgactttagaaaattgtgtttgaatcattttggcaaaattgatgtaaatatgaggaagctcgtgtcta-tttttcatcatata |
53017486 |
T |
 |
| Q |
321 |
tatccatgtgaaatgagaataatcatcaataaagagaacaaaataccgagcacctcccatagtaggtgtgggagtaggaccccagatatcagaatgcact |
420 |
Q |
| |
|
||||||||| || ||||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| |
|
|
| T |
53017487 |
tatccatgtaaagcgagaataatcatcaataaatagaacaatataacgagaacctcccatagtaggtgtgggagcaggaccccaaatattagaatgcact |
53017586 |
T |
 |
| Q |
421 |
agatcaaacggtgaagctgaaatggatgtacttt |
454 |
Q |
| |
|
| |||||| |||||| |||||||||| ||||||| |
|
|
| T |
53017587 |
atatcaaatggtgaaactgaaatggaagtacttt |
53017620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 223; Significance: 1e-122; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 12 - 480
Target Start/End: Complemental strand, 17451187 - 17450720
Alignment:
| Q |
12 |
tggacatcagtaagagcagcttccccccaagcacgttatggacaagaagctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctct |
111 |
Q |
| |
|
|||||| ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |
|
|
| T |
17451187 |
tggacagcagtaagagaagcttcaccccaagcacgttcaggacaagaggctgagataagcatggcacggacagagtcaagaatgtgacgatgttttctct |
17451088 |
T |
 |
| Q |
112 |
cagcgcgacccttttgttgagatgtgtatggacaagaaaattcagaaaatgtaccctgctcactaagaaaagacaagagtttagaatcacgatattccat |
211 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||||||||| |||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
17451087 |
cagcacgaccattttgttgagatgtatatggacaagagaattcagacaaggtaccctgctcaccaagaaaatctaagagtttagaatcacgatattccat |
17450988 |
T |
 |
| Q |
212 |
ggcattatctcgttggaaaactttaattactttagaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagctcgtgtctannnnnn |
311 |
Q |
| |
|
|||||||||||| | ||||||||||| | ||||||||||||||||||||||||||| ||||| || ||||||||||||| |||||| || | | |
|
|
| T |
17450987 |
ggcattatctcggcgaaaaactttaataattttagaaaattgtgtttgaatcatttttgcaaacttaatgtaaatttgaggaagctcatgacga-ttttt |
17450889 |
T |
 |
| Q |
312 |
natcatatctatccatgtgaaatgagaataatcatcaataaagagaacaaaataccgagcacctcccatagtaggtgtgggagtaggaccccagatatca |
411 |
Q |
| |
|
|||| | ||||||||| ||| ||||||||||||||||||| | |||||||||||||| ||||||||| ||||| ||||||| ||| ||||| |||||| |
|
|
| T |
17450888 |
catcaagtatatccatgtaaaacgagaataatcatcaataaacaaaacaaaataccgagaacctcccattgtaggagtgggagcaggtccccaaatatca |
17450789 |
T |
 |
| Q |
412 |
gaatgcactagatcaaacggtgaagctgaaatggatgtacttttatgaaaagataaagcaggttgttta |
480 |
Q |
| |
|
|| || || ||||||||||||||||||||||| |||||||||| ||| || ||||| ||||||||| |
|
|
| T |
17450788 |
gagtggacaagatcaaacggtgaagctgaaatattagtacttttattaaatgacaaagctggttgttta |
17450720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 38 - 428
Target Start/End: Complemental strand, 14825876 - 14825487
Alignment:
| Q |
38 |
ccaagcacgttatggacaagaagctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctctcagcgcgacccttttgttgagatgtg |
137 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||| || || ||||||||| ||||||||||||||||||| ||||| |||||||| ||||| |
|
|
| T |
14825876 |
ccaagcacgttcaggacaagaggctgagataagcatggcacgaacagaatcaagaatgggacgatgctttctctcagcacgaccattttgttgtgatgta |
14825777 |
T |
 |
| Q |
138 |
tatggacaagaaaattcagaaaatgtaccctgctcactaagaaaagacaagagtttagaatcacgatattccatggcattatctcgttggaaaactttaa |
237 |
Q |
| |
|
|| ||||||||||||||||| || |||||||||| || ||||||||| ||||||||| ||||||| |||||||| ||||||||||| | ||||| || | |
|
|
| T |
14825776 |
taaggacaagaaaattcagacaaggtaccctgcttaccaagaaaagataagagtttaaaatcacggtattccattgcattatctcggcgaaaaaccttga |
14825677 |
T |
 |
| Q |
238 |
ttactttagaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagctcgtgtctannnnnnnatcatatctatccatgtgaaatgag |
337 |
Q |
| |
|
|| |||||||||||||| || ||||||||| |||| || |||||||||||| |||||| || | | ||||| |||||| || || ||| |
|
|
| T |
14825676 |
ttgttttagaaaattgtgctttaatcatttttgcaacgttagtgtaaatttgaggaagctcatgccga-tttttcatcatgaatatccaagtataacgag |
14825578 |
T |
 |
| Q |
338 |
aataatcatcaataaagagaacaaaataccgagcacctcccatagtaggtgtgggagtaggaccccagatatcagaatgcactagatcaaa |
428 |
Q |
| |
|
|||||||||| ||||| | |||||||||||||| ||||||||||| ||| || |||| ||||||||| ||||||||||| || |||||||| |
|
|
| T |
14825577 |
aataatcatcgataaataaaacaaaataccgagaacctcccatagaaggagtaggagcaggaccccaaatatcagaatgtacaagatcaaa |
14825487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 5241905 - 5241965
Alignment:
| Q |
11 |
atggacatcagtaagagcagcttccccccaagcacgttatggacaagaagctgagataagc |
71 |
Q |
| |
|
||||||| | |||||||||||||| |||||||| |||| ||||||||| |||||||||||| |
|
|
| T |
5241905 |
atggacagcggtaagagcagcttcaccccaagcgcgttttggacaagaggctgagataagc |
5241965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 20 - 386
Target Start/End: Original strand, 20670117 - 20670483
Alignment:
| Q |
20 |
agtaagagcagcttc-cccccaagcacgttatggacaagaagctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctctcagcgcg |
118 |
Q |
| |
|
|||||||||| |||| |||||||||||||| ||||||||| |||| |||||||||| ||| | ||||||||||||||||||||||||||| ||| | || |
|
|
| T |
20670117 |
agtaagagcatcttcacccccaagcacgttctggacaagaggctgggataagcatgacacgaattgagtcaagaatgtgacgatgctttctttcatcacg |
20670216 |
T |
 |
| Q |
119 |
acccttttgttgagatgtgtatggacaagaaaattcagaaaatgtaccctgctcactaagaaaagacaagagtttagaatcacgatattccatggcatta |
218 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||||||| | || ||||| || |||||||| ||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
20670217 |
accattttgttgagatgtgtatggacatgaaaattcaaacaaggtaccatgttcactaagtaaagacaagagtttagaatcacgatcttccatgacatta |
20670316 |
T |
 |
| Q |
219 |
tctcgttggaaaactttaattactttagaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagctcgtgtctannnnnnnatcata |
318 |
Q |
| |
|
||||| | |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||| |
|
|
| T |
20670317 |
tctcgccgaaaaaatttaacaactttagaaaattgtgtttgaatcattttggcaaaattgatataaattcgaggaagctcgtgtcta-tttttcatcata |
20670415 |
T |
 |
| Q |
319 |
tctatccatgtgaaatgagaataatcatcaataaagagaacaaaataccgagcacctcccatagtagg |
386 |
Q |
| |
|
| ||||||||| || |||||||||||||||||||| | |||||||||||||| ||||||||| ||||| |
|
|
| T |
20670416 |
tatatccatgtaaagtgagaataatcatcaataaatataacaaaataccgagaacctcccatggtagg |
20670483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 52392977 - 52393043
Alignment:
| Q |
358 |
acaaaataccgagcacctcccatagtaggtgtgggagtaggaccccagatatcagaatgcactagat |
424 |
Q |
| |
|
|||||||||| || ||||||| || |||||||||||| |||||||||||||||| ||| ||| |||| |
|
|
| T |
52392977 |
acaaaataccaagaacctcccctaataggtgtgggagcaggaccccagatatcaaaattcacaagat |
52393043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 52392858 - 52392948
Alignment:
| Q |
207 |
tccatggcattatctcgttggaaaactttaattactttagaaaattgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagct |
297 |
Q |
| |
|
|||||||||||||||| | |||| |||||| |||| |||||||| |||||||||||||| |||| ||| |||||| ||||| ||||| |
|
|
| T |
52392858 |
tccatggcattatctcatccaaaaaatttaatggctttgaaaaattgtttttgaatcattttgacaaagttgctgtaaaattgaggaagct |
52392948 |
T |
 |
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Target: chr7 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 50 - 366
Target Start/End: Complemental strand, 12544466 - 12544153
Alignment:
| Q |
50 |
tggacaagaagctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctctcagcgcgacccttttgttgagatgtgtatggacaagaa |
149 |
Q |
| |
|
||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||| ||| |
|
|
| T |
12544466 |
tggacaagatgctgaaataagcatggcacggactgagtcaagaatgtgacgatgctttctctcagcacaactattttgttgagatgtgtatggacatgaa |
12544367 |
T |
 |
| Q |
150 |
aattcagaaaatgtaccctgctcactaagaaaagacaagagtttagaatcacgatattccatggcattatctcgttggaaaactttaattactttagaaa |
249 |
Q |
| |
|
|| | || || || | ||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| | || |||||||| ||||| ||| |
|
|
| T |
12544366 |
aactgggacaaagtcctctgctcattaagaaatgacaagagtttagaatcacgatattttgtggcattatctcgccgaaagactttaatgacttt--aaa |
12544269 |
T |
 |
| Q |
250 |
attgtgtttgaatcattttggcaaaattgatgtaaatttgagtaagctcgtgtctannnnnnnatcatatctatccatgtgaaatgagaataatcatcaa |
349 |
Q |
| |
|
|||||||| | |||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| || ||||||||||||||| |
|
|
| T |
12544268 |
attgtgttgaattcattttgataaaattgatgtaaatttgaggaagctcgtgtcta-tttttcatcatatatatccatgtaaagcgagaataatcatcaa |
12544170 |
T |
 |
| Q |
350 |
taaagagaacaaaatac |
366 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
12544169 |
taaatagaacaaaatac |
12544153 |
T |
 |
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Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 59 - 275
Target Start/End: Complemental strand, 15269249 - 15269032
Alignment:
| Q |
59 |
agctgagataagcatggcacagactgagtcaagaatgtgacgatgctttctctcagcgcgacccttttgttgagatgtgtatggacaagaaaattcagaa |
158 |
Q |
| |
|
|||||||||||||||| |||| ||| ||||||||| ||||||||||||||||||||||| ||| ||||||||| |||| ||||||||| || | ||||| |
|
|
| T |
15269249 |
agctgagataagcatgacacaaactaagtcaagaacgtgacgatgctttctctcagcgcaaccattttgttgaaatgtatatggacaa-aataatcagac |
15269151 |
T |
 |
| Q |
159 |
aatgtaccctgctcactaagaaaagacaagagtttaga-at-cacgatattccatggcattatctcgttggaaaactttaattactttagaaaattgtgt |
256 |
Q |
| |
|
|| |||| |||||||| ||||||||||||||||||||| || || ||||| |||||||||||||||||| |||||||||| | ||||||||| | || |
|
|
| T |
15269150 |
aaggtactctgctcaccaagaaaagacaagagtttagatatacaatatatttcatggcattatctcgttgaaaaactttaaagattttagaaaactaagt |
15269051 |
T |
 |
| Q |
257 |
ttgaatcattttggcaaaa |
275 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
15269050 |
ttgaatcattttggcaaaa |
15269032 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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