View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10995_high_6 (Length: 372)
Name: NF10995_high_6
Description: NF10995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10995_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 25929675 - 25930018
Alignment:
| Q |
17 |
aggttatcattcttcaagcaattcaaaacttgattttcatgtagttgttaggaagccaagggaaaccaaaaagtgtggagagttttttggcgaagggcta |
116 |
Q |
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| T |
25929675 |
aggttgtcattcttcaagcaattcaaaacttggttttcatgtagttgttaggaagccaagggaaaccaaaaagtgtggagagttttttggcgaagggcta |
25929774 |
T |
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| Q |
117 |
aaggtaaaaatggaaacaatgagaatcaagtagccaataaaataataggaagagcactgttgatgtggcagttatttacaggtacggtgagaccaattag |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
25929775 |
aaggtaaaaatggaaacaatgagaatcaagtagccaataaaataataggaagagcactgttgatgtggcagttatttacaggtacggtgagactaattag |
25929874 |
T |
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| Q |
217 |
agaggatggagggggcatgacttcatctcatgatttgtttgttcttattgacagagataatattttctgtaaaacttttagttctgaaattctggtgtaa |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
25929875 |
agaggatggagggggcatgacttcatctcatgatttgtttgttcttattgacagagataatattttctgtaaaaattttagttctgaaattctggtgtaa |
25929974 |
T |
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| Q |
317 |
tagctgaggatcactgttgcattcagacttataatattcttcat |
360 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25929975 |
tagctgaggatcactgttgcattcagacttataatattcttcat |
25930018 |
T |
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