View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10995_high_8 (Length: 337)
Name: NF10995_high_8
Description: NF10995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10995_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 8 - 334
Target Start/End: Complemental strand, 29648981 - 29648655
Alignment:
| Q |
8 |
gtgaagcctacgataacgtaccattttgatggaggtgctgattttgtggtggctcctgagtcaggatttctgtctgcaggagacgggaggaataaagtat |
107 |
Q |
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| T |
29648981 |
gtgaagcctacgataacgtaccattttgatggaggtgctgattttgtggtggctcctgagtcaggatttctgtctgcaggagacgggaggaataaagtat |
29648882 |
T |
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| Q |
108 |
tctgcttggctgttctagggcacaatgattttggaaatatattgggagtcatcaaccaagctgatcatactttcctctttgatgttggaaagaatcaagt |
207 |
Q |
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| T |
29648881 |
tctgcttggctgttctagggcacaatgattttggaaatatattgggagtcatcaaccaagctgatcatactttcctctttgatgttggaaagaatcaagt |
29648782 |
T |
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| Q |
208 |
ttcttttaccccaaaagcaaaaacttgtagtaattaatgcgtgataaactatgtgaagtgtaatttgaatgattttagataagtccttcaaatttaaata |
307 |
Q |
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||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29648781 |
ttcttttaccccaaaagcaaaaacttgtagtaagtaatgtgtgataaactatgtgaagtgtaatttgaatgattttagataagtccttcaaatttaaata |
29648682 |
T |
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| Q |
308 |
aaagtgtggttttcttatagtcttcat |
334 |
Q |
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||||||||||||||||||||||||||| |
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| T |
29648681 |
aaagtgtggttttcttatagtcttcat |
29648655 |
T |
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