View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10995_low_10 (Length: 283)
Name: NF10995_low_10
Description: NF10995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10995_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 16641141 - 16641213
Alignment:
| Q |
74 |
atatcaagaagcttacatgttggcagacatgcaaaggtggttccacttcagccttttcctatatcttatctaa |
146 |
Q |
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| T |
16641141 |
atatcaagaagcttacatgttggcagacatgcagaggtggttccacttcaaccttttcctatatcttatctaa |
16641213 |
T |
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Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 16641402 - 16641474
Alignment:
| Q |
207 |
aagtgtatgtttgtctcttgtggacgtggttgaacaccttggatactcatggatcattaaacaaccaccactt |
279 |
Q |
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|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16641402 |
aagtgtatttttgtctcttgtggacgtggctgaacaccttggatactcatggatcattaaacaaccaccactt |
16641474 |
T |
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